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WISCONSIN PACKAGE PROVIDES ACCESS TO SEQSTORE DATABASES.


Accelrys Inc., Madison, Wisc., a subsidiary of Pharmacopeia pharmacopeia /phar·ma·co·pe·ia/ (-ko-pe´ah) an authoritative treatise on drugs and their preparations. See also USP. pharmacopei´al
United States Pharmacopeia  see under U.
, Inc. (NASDAQ: PCOP PCOP - Plasma Colloid Osmotic Pressure), has updated SeqStore, its Oracle data management and analysis system used by pharmaceutical, agrochemical, and biotechnology companies to assemble their disparate data types into an integrated data warehouse.

SeqStore supplies the necessary tools to integrate sequence data and annotation from a variety of sources within an institution's Oracle relational database Hierarchical, Network and Object Databases
In non-relational "hierarchical" and "network" databases, records in one file contain embedded pointers to the locations of records in another, such as customers to orders and vendors to purchases. These are fixed links set up ahead of time to speed up daily processing. Another type of non-relational database is the "object database," which stores data consistent with their object model (see object database).
. SeqStore's improved web interface helps IT personnel create relational databases, load sequences into those databases, and set security clearances for querying and adding information to those databases. The web interface also includes data mining and reporting capabilities, allowing researchers to locate sequences of interest.

The relational database version of the Wisconsin Package(tm) provides seamless access to SeqStore databases for comprehensive sequence review and manipulation. As an industry standard for sequence analysis, the Wisconsin Package offers database searching, fragment assembly, multiple sequence comparison and alignment, nucleic acid secondary structure prediction, evolutionary analysis, PCR primer prediction, gene prediction and protein analysis, all powered by robust algorithms. A range of desktop tools running on the researcher or institution's platform of choice-including Accelrys' SeqWeb (web-based) and SeqLab (Windows-based) products-facilitate using the Package with SeqStore databases.

SeqStore's analysis manager allows users to build analysis pipelines using Wisconsin Package or third-party tools that take data through a series of analyses, automatically recording results to the relational database and notifying researchers if certain criteria have been met.

With publicly-available nucleic acid and protein data fed directly into SeqStore databases on a daily basis via FTP from Accelrys, researchers realize immediate benefits from the availability of up-to-date data while IT personnel realize time savings because there is no need to format data.

About Accelrys Inc.

On June 1, four leading informatics companies combined and became Accelrys. Accelrys offers market-leading software solutions for bioinformatics, cheminformatics, and modeling for the life and materials sciences. Accelrys Consulting Services provides expert assistance in the configuration, implementation and integration of a wide variety of software solutions to enable superior research and discovery. Accelrys has over 750 employees located worldwide. Its key locations are its Centers of Excellence in San Diego CA, Cambridge UK, and Princeton NJ, and its Technology Centers in Leeds UK and Madison WI.

For more visit http://www.accelrys.com/seqstore-pr or call 608-231-5200
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Comment:WISCONSIN PACKAGE PROVIDES ACCESS TO SEQSTORE DATABASES.
Publication:Online Product News
Article Type:Product Announcement
Geographic Code:1USA
Date:Aug 1, 2001
Words:376
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