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Ultrasensitive nanowires catch mutations.


In the nanoworld, the division between wet biology and dry electronics can disappear. As a demonstration, researchers have devised a nanowire sensor that binds to DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 molecules and produces an electrical signal almost instantaneously. Such direct detection of DNA could enable physicians to use a single drop of blood to swiftly screen patients for myriad genetic disorders The following is a list of genetic disorders and their origins. Beside most disorders is a code that indicates the type of fertilization and the chromosome involved.
  • P - Point mutation, or any insertion/deletion entirely inside one gene
.

The sensor, developed by chemist Charles Lieber Charles Lieber (born 1959) is a leading nanoscientist at Harvard University. He holds a joint position between the Department of Chemistry, Chemical Biology, and Division of Engineering and Applied Sciences.  of Harvard University Harvard University, mainly at Cambridge, Mass., including Harvard College, the oldest American college. Harvard College


Harvard College, originally for men, was founded in 1636 with a grant from the General Court of the Massachusetts Bay Colony.
 and Jong-in Hahm, now of the Pennsylvania State University Pennsylvania State University, main campus at University Park, State College; land-grant and state supported; coeducational; chartered 1855, opened 1859 as Farmers' High School.  in State College, consists of a silicon wire several microns long and 20 nanometers wide. That's the width of a common cold virus. The small-scale system detects a genetic mutation that underlies cystic fibrosis cystic fibrosis (sĭs`tĭk fībrō`sĭs), inherited disorder of the exocrine glands (see gland), affecting children and young people; median survival is 25 years in females and 30 years in males. , a lung-clogging disorder that affects about 30,000 people in the United States.

To detect the mutation, the researchers placed the wires on a silicon surface and fixed an electrode to each of the wires' ends. They then coated the wires with receptors harboring fragments of DNA that are complementary to the normal sequence of the gene implicated im·pli·cate  
tr.v. im·pli·cat·ed, im·pli·cat·ing, im·pli·cates
1. To involve or connect intimately or incriminatingly: evidence that implicates others in the plot.

2.
 in cystic fibrosis.

When a sample containing DNA passed over the nanowire, the relevant DNA bound to the receptor and the nanowire's conductivity increased. Normal DNA formed tight bonds with the receptor DNA, boosting the nanowire's conductivity dramatically. Mutant DNA, on the other hand, bound to the receptor only loosely, resulting in a much smaller increase in conductivity. Lieber and Hahm describe their results in the Jan. 14 Nano Letters.

Not only can the nanowires respond to a gene within seconds, but they also generate measurable signals from just a few DNA molecules, says Hahm.

Existing genetic-screening technologies are more cumbersome. To obtain a strong signal, clinicians have to extract DNA from cells, produce many copies of it, label it with fluorescent tags, and then measure the fluorescence after it binds to detectors. The new nanowire skirts those time-consuming steps.

"What's also great about this technique is its versatility," says Hahm. In the cystic fibrosis demonstration, the nanowires detected a particular gene mutation that accounts for 70 percent of the disease's cases. Scientists have identified hundreds of additional mutations in this same gene that appear to underlie the remaining 30 percent of cases. With the new biosensor A device that detects and analyzes body movement, temperature or fluids and turns it into an electronic signal. See lab on a chip and data glove.
Biosensor 
 method, researchers could pack a chip with hundreds of wires--each tailored to a specific mutation--and hook them up to arrays of electrodes so that their individual signals could be read out. Such a device could detect all the cystic fibrosis mutations simultaneously from a single blood sample.

Because the nanowires are so tiny, researchers could eventually pack millions of them onto a chip and rapidly test a blood sample for all the known genetic mutations in the human genome. The sensor could do this at a fraction of the cost of current genetic screens, says Hahm.

"What's exciting here is that the researchers expanded the capability of the nanowires to detect DNA," says Yi Cui, a chemist at the University of California, Berkeley The University of California, Berkeley is a public research university located in Berkeley, California, United States. Commonly referred to as UC Berkeley, Berkeley and Cal . The same silicon nanowires used to make these DNA sensors have been used by Lieber's team to make nanoscale transistors for computing devices.

Compared with complex computer circuitry, Lieber says, the DNA sensors "are probably one of the most realistic near-term applications of nanoscience."
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Title Annotation:Gene Screen
Author:Goho, A.
Publication:Science News
Geographic Code:1USA
Date:Jan 3, 2004
Words:532
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