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The SNP Consortium Reaches Agreement with Celera Genomics and Applied Biosystems To Construct Genome-Wide SNP Linkage Map; Data Should Facilitate Genetic Analysis.


Business Editors/Health & Medical Writers

BIOWIRE2K

ROCKVILLE, Md. & CHICAGO--(BW HealthWire)--Aug. 28, 2001

Applera Corporation and The SNP SNP Scottish National Party

Noun 1. SNP - (genetics) genetic variation in a DNA sequence that occurs when a single nucleotide in a genome is altered; SNPs are usually considered to be point mutations that have been evolutionarily
 Consortium Ltd. today announced that The SNP Consortium has contracted with Applera's Celera Genomics (NYSE NYSE

See: New York Stock Exchange
:CRA See Community Reinvestment Act. ) and Applied Biosystems Applied Biosystems, Inc. (formerly NASDAQ: ABIO) is the original name of a pioneer biotechnology company founded in 1981 in Foster City, California, among the Silicon Valley cities of the southern San Francisco Bay Area.  (NYSE:ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother.


(Application Binary Interface) A specification for a specific hardware platform combined with the operating system.
) Groups to provide data for a genome-wide SNP-based linkage map for genetic analysis. Comprising 2,000 SNPs selected from The SNP Consortium's database, the map will be validated by Celera using the Applied Biosystems TaqMan(R) reagent system. Financial terms were not disclosed.

The SNP Consortium has selected the Laboratory of Computational Genetics in the Department of Genetics at Rutgers University Rutgers University, main campus at New Brunswick, N.J.; land-grant and state supported; coeducational except for Douglass College; chartered 1766 as Queen's College, opened 1771. Campuses and Facilities


Rutgers maintains three campuses.
 to analyze the resulting data. The SNP linkage map is expected to be published by the end of this year.

Single nucleotide polymorphisms, or SNPs, are the most common type of genetic variation in the human genome The human genome is the genome of Homo sapiens, which is composed of 24 distinct pairs of chromosomes (22 autosomal + X + Y) with a total of approximately 3 billion DNA base pairs containing an estimated 20,000–25,000 genes. . The SNP Consortium to date has identified and mapped more than 1.5 million SNPs, which are distributed throughout the genome. SNP-based linkage analysis linkage analysis Genetics A gene-hunting technique that traces patterns of heredity in large, high-risk families, in an attempt to locate a disease-causing gene mutation by identifying traits co-inherited with it; the formal study of the association between the  is expected to add value to the Consortium's database by providing information about the relative location of one SNP to another.

Availability of the human genome sequence has made it possible to determine the physical position and order along the chromosomes of SNPs identified by the Consortium. In the proposed SNP linkage map, the position and order of 2,000 SNPs will be determined by analyzing their inheritance through families, which results in a genetic SNP map. Such information can be useful in understanding the extent to which SNPs of interest travel together from one generation to the next.

As has been the practice for all data The SNP Consortium has generated, the SNP-based linkage map will be made freely available for use by medical researchers worldwide.

"The goal of The SNP Consortium is to make an important and reliable research tool rapidly and widely available," said Arthur Holden Arthur Holden is a Canadian voice actor, born in Montreal. He is best known for playing the "head office guy" in Fries with That? and voicing Mr. Ratburn in Arthur. He also voices Baba-Miao in Sagwa, the Chinese Siamese Cat, and Josh in Mr. Meaty and Mr. , chairman and chief executive officer of The SNP Consortium. "A genome-wide SNP linkage map will make navigation of the genome easier for researchers searching for disease-related or other genes of interest."

"We are pleased to be working with The SNP Consortium to create a genome-wide SNP-based linkage map as it is an important step toward better understanding of human genetic variations and should allow for more rapid design of improved diagnostics and therapeutics," said J. Craig Venter The introduction of this article is too short.
To comply with Wikipedia's lead section guidelines, it should be expanded.
, Ph.D., Celera's president and chief scientific officer. "We believe that the combined expertise represented in this agreement should enable advancements in research and medicine."

"Analysis of SNPs is expected to provide a rapid means of evaluating the presence and impact of these genetic variations," said Michael W. Hunkapiller, Ph.D., president of Applied Biosystems. "This information can provide a valuable set of tools for new therapeutic discovery. The SNP genotyping assays will be validated to the standards set by The SNP Consortium, making these assay results widely useful in a variety of research settings. We are extremely pleased that the SNP Consortium, a multi-company pioneer in this field, has chosen Applied Biosystems' sequence detection systems, including the ABI PRISM(R) 7900HT Sequence Detection System, and TaqMan(R) probes and Celera's genotyping service business for this important project."

The SNP Consortium announced in April 1999 a two-year plan to construct a high-density and high-quality map of SNPs throughout the human genome. The SNP linkage map will provide additional information on the inheritance of genetic information which will improve the utility of SNPs for genetic research. The availability of the Consortium's publicly accessible SNP database, together with information from SNP-based linkage analysis, should help medical researchers pinpoint genetic differences that predispose pre·dis·pose
v.
To make susceptible, as to a disease.
 some but not others to diseases and the underlying variability in individual responses to treatment. In turn, this knowledge is expected to enhance understanding of disease processes and facilitate discovery, development and delivery of safer and more effective medications.

About The SNP Consortium

The SNP Consortium is organized as a non-profit entity whose goal is to create and make publicly available a high-quality SNP map of the human genome. The Consortium's members include the medical research charity, the Wellcome Trust The Wellcome Trust is a United Kingdom-based charity established in 1936 to administer the fortune of the American-born pharmaceutical magnate Sir Henry Wellcome. Its income was derived from what was originally called Burroughs Wellcome & Co, later renamed in the UK as the ; 10 pharmaceutical companies including AstraZeneca, Aventis Pharma, Bayer AG, Bristol-Myers Squibb Company, F. Hoffmann-La Roche, GlaxoSmithKline, Novartis Pharmaceuticals, Pfizer Inc, Searle (now part of Pharmacia); and Motorola, Inc., IBM (International Business Machines Corporation, Armonk, NY, www.ibm.com) The world's largest computer company. IBM's product lines include the S/390 mainframes (zSeries), AS/400 midrange business systems (iSeries), RS/6000 workstations and servers (pSeries), Intel-based servers (xSeries) , and Amersham Pharmacia Biotech. Academic centers including the Whitehead Institute for Biomedical Research, Washington University School of Medicine Washington University School of Medicine, located in St. Louis, Missouri, is one of the most competitive and highly regarded medical schools and biomedical research institutes in the United States.  in St. Louis, the Wellcome Trust's Sanger Centre, Stanford Human Genome Center, and Cold Spring Harbor Laboratory The Cold Spring Harbor Laboratory , are involved in SNP identification and analysis. Orchid BioSciences performs third-party validation and quality control testing on SNPs identified through the Consortium's research.

About Celera Genomics, Applied Biosystems and Applera Corporation

Celera's genetic analysis discovery platforms provide discovery collaborators with a fully integrated suite of tools to enable the discovery of genotype-phenotype correlations that may be the basis for novel diagnostics and therapeutics. Celera's SNP reference database contains more than 3 million SNPs -- including both Celera-generated SNPs and public SNPs -- mapped in the genome to base-pair resolution. This extensive database provides candidate SNPs for both mapping studies and studies of specified gene targets. Celera's large facility of ABI PRISM(R) 3700 DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 Analyzers enables the rapid identification of a wide range of sequence variations in study populations. Celera's high throughput genotyping facility, employing the ABI PRISM(R) 7900HT Sequence Detection System, is capable of determining millions of genotypes per year for SNP validation and association studies with greater than 99% accuracy. And Celera's extensive bioinformatics and statistical genetics expertise allow customers and collaborators access to information and computational tools necessary for genetic analysis.

The ABI PRISM(R) 7900HT Sequence Detection System is an automated, real-time PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
 instrument designed to perform gene expression quantitation and single nucleotide polymorphism (SNP) detection. The 7900HT Sequence Detection System uses the TaqMan(R) probe technology or "5' nuclease nuclease /nu·cle·ase/ (noo´kle-as) any of a group of enzymes that split nucleic acids into nucleotides and other products.

nu·cle·ase
n.
 assay," known for its sensitivity and specificity.

Applera Corporation comprises two operating groups. The Celera Genomics Group, an integrated source of genomic and related medical information headquartered in Rockville, Md., is evolving to become a next generation diagnostic and therapeutic discovery business. Celera intends to leverage its industrialized in·dus·tri·al·ize  
v. in·dus·tri·al·ized, in·dus·tri·al·iz·ing, in·dus·tri·al·iz·es

v.tr.
1. To develop industry in (a country or society, for example).

2.
 approach to biology to develop platforms for enabling these new discoveries both for subscribers and for its own internal product development. The Applied Biosystems Group (NYSE:ABI) develops and markets instrument-based systems, reagents, software, and contract services to the life science industry and research community. Customers use these tools to analyze nucleic acids Nucleic acids
The cellular molecules DNA and RNA that act as coded instructions for the production of proteins and are copied for transmission of inherited traits.
 (DNA and RNA RNA: see nucleic acid.
RNA
 in full ribonucleic acid

One of the two main types of nucleic acid (the other being DNA), which functions in cellular protein synthesis in all living cells and replaces DNA as the carrier of genetic
), small molecules, and proteins to market scientific discoveries, leading to the development of new pharmaceuticals, and to conduct standardized testing. Applied Biosystems is headquartered in Foster City, Calif., and reported sales of $1.6 billion during fiscal 2001. Celera Diagnostics has been established as a joint venture between Applied Biosystems and Celera Genomics. This new venture is focused on discovery, development and commercialization of novel diagnostic tests. Information about Applera Corporation, including reports and other information filed by the company with the Securities and Exchange Commission, is available on the World Wide Web at www.applera.com, or by telephoning 800.762.6923.

Certain statements in this press release are forward-looking. These may be identified by the use of forward-looking words or phrases such as "believe," "expect," "anticipate," "should," "planned," "estimated," and "potential," among others. These forward-looking statements are based on Applera Corporation's current expectations. The Private Securities Litigation Reform Act The Private Securities Litigation Reform Act of 1995 (PSLRA) implemented several significant substantive changes affecting certain cases brought under the federal securities laws, including changes related to pleading, discovery, liability, class representation and awards fees and  of 1995 provides a "safe harbor Safe Harbor

1. A legal provision to reduce or eliminate liability as long as good faith is demonstrated.

2. A form of shark repellent implemented by a target company acquiring a business that is so poorly regulated that the target itself is less attractive.
" for such forward-looking statements. In order to comply with the terms of the safe harbor, Applera Corporation notes that a variety of factors could cause actual results and experience to differ materially from the anticipated results or other expectations expressed in such forward-looking statements. The risks and uncertainties that may affect the operations, performance, development, and results of Celera Genomics' businesses relative to these forward looking statements include but are not limited to (1) a unique and expanding business plan; (2) uncertainty of revenue growth; (3) heavy reliance on strategic relationship with the Applied Biosystems Group; (4) potential liabilities related to use of hazardous materials; (5) dependence on the unique expertise of its scientific and management staff; (6) uncertainty and availability of patent, copyright, and intellectual property protection and the ability to protect trade secrets; (7) dependence on computer hardware, software, and internet applications; (8) access to biological materials; (9) legal, ethical, and social issues affecting demand for products; (10) disruptions caused by rapid growth of the business; (11) government regulation of its products and services; (12) lengthy and uncertain development cycle for therapeutic products; (13) failure to close the proposed acquisition of Axys Pharmaceuticals, or Celera's inability to successfully integrate Axys' operations; and (14) other factors that might be described from time to time in Applera Corporation's filings with the Securities and Exchange Commission.

Note to Editors: Applera, Celera, Celera Genomics, Celera Diagnostics, and Celera Discovery System are trademarks and ABI PRISM and Applied Biosystems are registered trademarks of Applera Corporation or its subsidiaries in the US and certain other countries.
COPYRIGHT 2001 Business Wire
No portion of this article can be reproduced without the express written permission from the copyright holder.
Copyright 2001, Gale Group. All rights reserved. Gale Group is a Thomson Corporation Company.

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Geographic Code:1USA
Date:Aug 28, 2001
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