Stanford University and Applied Biosystems Identify Gene Expression Signature Correlated with Survival in Diffuse Large B Cell Lymphoma.Business Editors/Health/Medical Writers BIOWIRE2K FOSTER CITY, Calif.--(BUSINESS WIRE)--April 28, 2004 Discovery Enabled by Applied Biosystems TaqMan(R) Gene Expression Assays and Real-Time PCR PCR polymerase chain reaction. PCR abbr. polymerase chain reaction Polymerase chain reaction (PCR) Instruments In a paper that will be published tomorrow in the New England Journal of Medicine The New England Journal of Medicine (New Engl J Med or NEJM) is an English-language peer-reviewed medical journal published by the Massachusetts Medical Society. It is one of the most popular and widely-read peer-reviewed general medical journals in the world. , a team of scientists from Stanford University and Applied Biosystems (NYSE NYSE See: New York Stock Exchange :ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother. (Application Binary Interface) A specification for a specific hardware platform combined with the operating system. ), an Applera Corporation business, describe the identification of six genes associated with survival in diffuse large B cell lymphoma Diffuse large B-cell lymphoma is a type of aggressive Non-Hodgkin Lymphoma. It accounts for approximately 40% of NHL in adulthood[1] References 1. ^ [1] Pathobiology of the aggressive and highly aggressive non-Hodgkin's lymphomas (DLBCL DLBCL diffuse large B-cell lymphoma ), the most common form of non-Hodgkin's lymphoma. The paper, entitled "Prediction of survival in diffuse large B-cell lymphoma diffuse large B-cell lymphoma Oncology A B-cell lymphoma that is the most common type–accounting for 30-40%–of NHL, which occurs in children and adults. See Lymphoma, Non-Hodgkin's lymphoma, WHO classification. based on the expression of six genes," presents an analysis of 36 genes that had been associated in other studies with survival in DLBCL and which were selected from among more than 10,000 candidate genes. This study is the first to identify a set of specific genes whose activity correlates with survival, and which were previously associated with this disease in multiple published studies employing a variety of molecular, biological, or technical methods. Expression profiles for these 36 genes were measured in 66 independent DLBCL tumor samples using real-time PCR and the Applied Biosystems TaqMan(R) Gene Expression Assays on an ABI PRISM(R) 7900HT Sequence Detection System. Together, this system enables rapid, accurate, and cost-effective discovery and validation of gene expression patterns in complex diseases. The genes most predictive of overall survival in DLBCL were LMO LMO Localized Molecular Orbital LMO Low Mars Orbit (NASA) LMO Last Man Out LMO Logistics Management Office (USACE) LMO Legal Maintenance Organization LMO Leave Me One (a message) 2, BCL BCL - The successor to Atlas Commercial Language. ["The Provisional BCL Manual", D. Hendry, U London 1966]. 6, FN1, CCND CCND Change Control for Network Devices CCND City County Narcotics Drug Taskforce (now City County Narcotics Unit; Idaho) 2, SCYA SCYA Southern California Yachting Association 3 and BCL2. "These findings are interesting because they propose that molecular profiling may help refine prognoses in this difficult-to-treat blood cancer," said Ronald Levy, MD, Professor of Medicine and lead author, Stanford University Medical Center Stanford University Medical Center (Stanford Hospital & Clinics) is one of four hospitals affiliated with Stanford University and Stanford University School of Medicine, along with the Lucile Packard Children's Hospital, the Veteran's Administration Hospital in Palo Alto, and Santa . "Currently, physicians rely on the International Prognostic Index The International Prognostic Index (IPI) is a clinical tool developed by oncologists to aid in predicting the prognosis of patients with aggressive non-Hodgkin's lymphoma. Prior to 1993, when the IPI was developed, the primary consideration in assessing prognosis was the Ann Arbor (IPI) to evaluate patients with DLBCL. This predictive index is based on clinical factors including age, stage of the tumor, and the presence of disease that has spread outside the point of origin. While the IPI provides a standard way to evaluate cases of DLBCL, clinical outcomes among DLBCL patients with identical IPI values vary considerably. We look forward to further exploration of this model by replicating the study in a larger and more diverse population. The ultimate goal is that these profiles may lead to insights that could eventually be applicable toward the development of new medicines, as well as to improved means of matching patients with appropriate treatment regimens." Diffuse large B-cell lymphoma is the most common type of lymphoma in adults, with an annual incidence in the United States of more than 25,000 cases, accounting for 30-40% of cases of non-Hodgkin's lymphomas. While combination chemotherapy has improved treatment outcomes, currently fewer than half of DLBCL patients achieve durable remission. "These findings provide an important example of the practical applications for the latest genomic technologies and the type of research that is at the interface of basic and clinical research," said Michael W. Hunkapiller, Ph.D., President of Applied Biosystems. "Applied Biosystems is pleased to have worked with Dr. Levy and his colleagues in planning and executing these studies, and we look forward to collaborating with other clinical researchers to further advance the field of disease research." About the Applied Biosystems TaqMan(R) Products The Applied Biosystems TaqMan(R) Genomic Products (formerly known as the Assays-on-Demand(TM) Products) are a comprehensive collection of pre-designed primer and probe sets that comprise over 22,000 gene expression assays and over 157,000 SNP genotyping assays. The Applied Biosystems TaqMan(R) Gene Expression Assays allow researchers to quickly and easily perform quantitative gene expression studies on human, mouse, and rat genes. The Applied Biosystems TaqMan(R) SNP Genotyping Assays represent the broadest collection of pre-designed and validated SNP genotyping assays for focused association studies, which look at a smaller number of SNPs over many samples. TaqMan(R) Gene Expression Assays for the six genes identified in this study are available for purchase on the Applied Biosystems Web site. To browse and order, please visit http://myscience.appliedbiosystems.com/. About Applera Corporation and Applied Biosystems Applera Corporation consists of two operating groups. The Applied Biosystems Group serves the life science industry and research community by developing and marketing instrument-based systems, consumables, software, and services. Customers use these tools to analyze nucleic acids (DNA DNA: see nucleic acid. DNA or deoxyribonucleic acid One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes. and RNA RNA: see nucleic acid. RNA in full ribonucleic acid One of the two main types of nucleic acid (the other being DNA), which functions in cellular protein synthesis in all living cells and replaces DNA as the carrier of genetic ), small molecules, and proteins to make scientific discoveries, develop new pharmaceuticals, and conduct standardized testing. Applied Biosystems is headquartered in Foster City, CA, and reported sales of $1.7 billion during fiscal 2003. The Celera Genomics Group (NYSE:CRA See Community Reinvestment Act. ), located in Rockville, MD, and South San Francisco South San Francisco, city (1990 pop. 54,312), San Mateo co., W Calif.; inc. 1908. South San Francisco has several industrial parks; its manufactures include medical supplies and equipment, foods, paint, paper products, consumer goods, and clothing. , CA, is engaged principally in integrating advanced technologies to discover and develop new therapeutics. Celera intends to leverage its proteomic, bioinformatic, and genomic capabilities to identify and validate drug targets, and to discover and develop new therapeutics. Its Celera Discovery System(TM) online platform, marketed exclusively by Applied Biosystems, is an integrated source of information based on the human genome and other biological and medical sources. Celera Diagnostics, a 50/50 joint venture between Applied Biosystems and Celera Genomics, is focused on discovery, development, and commercialization of novel diagnostic products. Information about Applera Corporation, including reports and other information filed by the company with the Securities and Exchange Commission, is available at http://www.applera.com, or by telephoning 800.762.6923. Information about Applied Biosystems is available at http://www.appliedbiosystems.com/. Certain statements in this press release are forward-looking. These may be identified by the use of forward-looking words or phrases such as "believe," "expect," "intend," "anticipate," "should," and "planned," among others. These forward-looking statements are based on Applera Corporation's current expectations. The Private Securities Litigation Reform Act The Private Securities Litigation Reform Act of 1995 (PSLRA) implemented several significant substantive changes affecting certain cases brought under the federal securities laws, including changes related to pleading, discovery, liability, class representation and awards fees and of 1995 provides a "safe harbor" for such forward-looking statements. In order to comply with the terms of the safe harbor, Applera Corporation notes that a variety of factors could cause actual results and experience to differ materially from the anticipated results or other expectations expressed in such forward-looking statements. These factors include but are not limited to (1) rapidly changing technology and dependence on development of new products; (2) sales dependent on customers' capital spending policies and government-sponsored research; (3) uncertainty of the availability of intellectual property protection and the ability to protect trade secrets, and the risk of infringement claims; and (4) other factors that might be described from time to time in Applera Corporation's filings with the Securities and Exchange Commission. All information in this press release is as of the date of the release, and Applera does not undertake any duty to update this information, including any forward-looking statements, unless required by law. Applied Biosystems and Celera are registered trademarks and Applera, Assays-on-Demand, Celera Diagnostics, Celera Discovery System, and Celera Genomics are trademarks of Applera Corporation or its subsidiaries in the U.S. and/or certain other countries. For research use only. Not for use in diagnostic procedures. |
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