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Spelling of emerging pathogens.


To the Editor: Language is about comprehension; provided the parties in a discussion can understand each other, variations in pronunciation of individual words may be tolerated or disregarded. In modern English, numerous examples of variant pronunciations exist that cause no problems of comprehension (e.g., either, tomato, laboratory, fertile). These arise from several causes; regional practice is likely the most important factor, but the speaker's education and social background, personal preferences, and even etymologic theories also play a part. It would be futile and, some would feel, undesirable to attempt to impose uniformity by prescribing approved pronunciations if communication is not endangered. Moreover, both language and pronunciation are subject to constant change.

The same is not true regarding the spelling of organisms' names. Although we accept variation in pronunciation, we should not accept variation in the spelling of binomial binomial (bī'nō`mēəl), polynomial expression (see polynomial) containing two terms, for example, x+y. The binomial theorem, or binomial formula, gives the expansion of the nth power of a binomial (x+  names. Common spelling variants and the citation frequency (PubMed) of 4 organisms, Acinetobacter baumannii, Coccidioides immitis (the fungal causal agent of coccidioidomycosis coccidioidomycosis (kŏksĭd'ēoi'dōmīkō`sĭs), systemic fungus disease (see fungal infection) endemic to arid regions of the Americas, contracted by inhaling dust containing spores of the fungus Coccidioides immitis. ), Coxiella burnetii Coxiella burnetii Infectious disease The single species of genus Coxiella, family Rickettsiaceae, a short, rod-shaped bacterium; it is global in distribution, causes Q fever, spreads by aerosol, primarily infects cattle, sheep, goats, multiplies well in the  (the causal agent of Q fever Q fever: see rickettsia. ), and Tropheryma whipplei (the causal agent of Whipple disease), are detailed in the Table. Common spelling mistakes occur with double letters (e.g., nn, ii), as well as complicated strings of consecutive vowels (e.g., Coccidioides). However, a defense to such criticism is that various authors have adopted the spelling of a previous taxonomic description that has become outdated, e.g., C. burneti (previous) and C. burnetii (current). Historic change in the spelling of these names is the primary reason they are published and cited in PubMed with different spellings. However, even disregarding historic taxonomic variants, [approximately equal to] 14.8% of Tropheryma whipplei, 14.3% of Acinetobacter baumannii, 12.3% of Coxiella burnetii, and 1.9% of Coccidioides citations are spelled incorrectly in PubMed. These relatively large percentages may mean that relevant literature is overlooked in searches.

Authors should be aware that previous taxonomic spelling of binomial names exist and check their historic evolution in the List of Prokaryotic pro·kar·y·ote also pro·car·y·ote  
n.
An organism of the kingdom Monera (or Prokaryotae), comprising the bacteria and cyanobacteria, characterized by the absence of a distinct, membrane-bound nucleus or membrane-bound organelles, and by DNA that
 Names with Standing in Nomenclature (www.bacterio.cict.fr). Authors should cite previous spelling when such a change has been recent and they may wish to include previous spellings in literature searches. Additionally, the most current and formally accepted spelling must be used when preparing a manuscript for publication.

The origins of incorrect and variant spellings of binomial names may lie in an array of sources, including original mispronunciation mis·pro·nounce  
v. mis·pro·nounced, mis·pro·nounc·ing, mis·pro·nounc·es

v.tr.
To pronounce badly or incorrectly.

v.intr.
To make a poor pronunciation.
 with subsequent incorrect phonetic transcription. Written language is rarely a phonetic transcript of vocal acoustics, however, it interfaces with several factors that prevent us from spelling words the way they sound. Orthography, which promotes the practice of writing words with the proper letters according to standard usage and conventionally correct spelling, is further complicated by the use of Greek or Latin words, each with their own linguistic peculiarities.

Although we may not be able to standardize phonetic pronunciation of binomial names locally, nationally, or internationally, we should be constantly conscious of their spelling. As authors and peer reviewers, we should strive to achieve uniformity in written media to promote enhanced communication with our peers in infectious diseases.

John E. Moore John E. Moore, born in Charleston, West Virginia, is an American politician and a former Lieutenant Governor of Kansas. In 2002 he was elected on the Democratic Party ticket as the running mate of Governor Kathleen Sebelius; he assumed office on January 13, 2003.  * and B. Cherie Millar *

* Belfast City Hospital The Belfast City Hospital (Irish: Ospidéal Chathair Bhéal Feirste) located in Belfast, Northern Ireland, is a 900-bed modern university teaching hospital providing local acute services and key regional specialties. Its distinctive tower block dominates the Belfast skyline. , Belfast, Northern Ireland, United Kingdom

References

(1.) Bouvet PJM PJM Pacific Journal of Mathematics
PJM Project Manager
PJM Puerto Jimenez, Costa Rica (Airport code)
PJM Pennsylvania New Jersey Maryland Interconnection LLC (Mid-Atlantic region power pool) 
, Grimont PAD. Taxonomy of the genus Acinetobacter with the recognition of Acinetobacter baumannii sp. nov., Acinetobacter haemolyticus sp. nov., Acinetobacter johnsonii sp. nov., and Acinetobacter junii sp. nov. and amended descriptions of Acinetobacter calcoaceticus and Acinetobacter lwoffii. Int J Syst Bacteriol. 1986;36:228-40.

(2.) Stevens DA. Coccidioidomycosis. N Engl J Med. 1995;332:1077-82.

(3.) Skerman VBD VBD Value Based Drafting (fantasy football)
VBD Voiceband Data
VBD Visual Branch Display
VBD Voice Band Data
, McGowan V, Sneath PHA PHA
abbr.
phytohemagglutinin



PHA

phytohemagglutinin, a plant lectin.
. Approved lists of bacterial names. Int J Syst Bacteriol. 1980;30:225-420.

(4.) Derrick EH. Rickettsia rickettsia (rĭkĕt`sēə), any of a group of very small microorganisms, many disease-causing, that live in vertebrates and are transmitted by bloodsucking parasitic arthropods such as fleas, lice (see louse), and ticks.  burneti: the cause of Q-fever. Med J Aust. 1939;1:14.

(5.) La Scola B, Fenollar F, Fournier PE, Altwegg M, Mallet mallet,
n a hammering instrument.

mallet, hard,
n a small hammer with a leather-, rubber-, fiber-, or metal-faced head; used to supply force or to supplement hand force for the compaction of foil or amalgam and to seat cast
 MN, Raoult D. Description of Tropheryma whipplei gen. nov., sp. nov., the Whipple's disease Whip·ple's disease
n.
A rare disease in which the intestinal wall is invaded by macrophages containing the remnants of bacteria and which is characterized by steatorrhea, generalized lymphadenopathy, arthritis, fever, and cough.
 bacillus bacillus (bəsĭl`əs), any rod-shaped bacterium or, more particularly, a rod-shaped bacterium of the genus Bacillus. Some bacterium in the genus cause disease, for example B. . Int J Syst Evol Microbiol. 2001;51: 1471-9.

(6.) Relman DA, Schmidt TM, MacDermott RP, Falkow S. Identification of the uncultured bacillus of Whipple's disease. N Engl J Med. 1992;327:293-301.

Address for correspondence: John E. Moore, Northern Ireland Public Health Laboratory, Department of Bacteriology bacteriology

Study of bacteria. Modern understanding of bacterial forms dates from Ferdinand Cohn's classifications. Other researchers, such as Louis Pasteur, established the connection between bacteria and fermentation and disease.
, Belfast City Hospital, Belfast, BT9 7AD, Northern Ireland, United Kingdom; fax: 44-28-2589-2887; email: jemoore@niphl.dnet.co.uk

The opinions expressed by authors contributing to this journal do not necessarily reflect the opinions of the Centers for Disease Control and Prevention Centers for Disease Control and Prevention (CDC), agency of the U.S. Public Health Service since 1973, with headquarters in Atlanta; it was established in 1946 as the Communicable Disease Center.  or the institutions with which the authors are affiliated.
Table. Common spellings of binomial names of organisms *

Organism name                                 Spelling variants
[no. citations in PubMed] *               [no. citations in PubMed]

Acinetobacter baumannii                       A. baumanii [117]
[844]                                         A. baumanni [18]
                                               A. baumani [6]
Coccidioides ([double dagger]) [1,209]        Coccidiodes [17]
                                               Coccidoides [4]
                                               Cocidioides [2]
                                              Coccidioidis [1]
Coxiella burnetii [1,531]                     C. burneti [374]
                                             C. burnetti [199]
                                             C. burnettii [16]
Tropheryma whippeei [52]                     T. whippelii [118]
                                              T. whippleii [5]
                                               T. whippeli [4]

Organism name                             Date official spelling first
[no. citations in PubMed] *                         described

Acinetobacter baumannii                         1986 ([dagger])
[844]
Coccidioides ([double dagger]) [1,209]          1896 ([section])
Coxiella bumetii [1,531]                       1980 ([paragraph])
Tropheryma whippeei [52]                            2001 (#)

* Organism name in List of Bacterial Names with Standing in
Nomenclature; search conducted June 2005.

([dagger]) Approved name described by Bouvet and Grimont (ref 1).

([double dagger]) Coccidioides is not a bacterium but a fungus;
however, this name is described in the Index Fungorum.

([section]) First described by Stiles (ref 2).

([paragraph]) Approved name described by Skerman et al. (ref 3); first
described by Derrick (ref 4) as Rickettsia burneti, the cause of Q
fever.

(#) Approved names described by La Scola et al. (ref 5); 1992, Relman
et al. (ref 6) tentatively proposed the name "T. whippelii."
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Author:Millar, B. Cherie
Publication:Emerging Infectious Diseases
Article Type:Letter to the Editor
Date:Nov 1, 2005
Words:945
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