Seasonal forecast of St. Louis encephalitis virus transmission, Florida.Disease transmission forecasts can help minimize human and domestic animal health risks by indicating where disease control and prevention efforts should be focused. For disease systems in which weather-related variables affect pathogen proliferation, dispersal, or transmission, the potential for disease forecasting exists. We present a seasonal forecast of St. Louis encephalitis St. Louis encephalitis see St. Louis encephalitis. virus transmission in Indian River County, Florida Indian River County is a county located in the U.S. state of Florida. As of 2000, the population was 112,947. The U.S. Census Bureau 2005 estimate for the county is 128,594 [1]. Its county seat is Vero Beach, Florida6. . We derive an empiric relationship between modeled land surface wetness and levels of SLEV SLEV Saint Louis Encephalitis Virus SLEV Surround Level transmission in humans. We then use these data to forecast SLEV transmission with a seasonal lead. Forecast skill is demonstrated, and a real-time seasonal forecast of epidemic SLEV transmission is presented. This study demonstrates how weather and climate forecast skill-verification analyses may be applied to test the predictability of an empiric disease forecast model. ********** St. Louis encephalitis virus (SLEV) is a mosquito-borne pathogen that is prevalent throughout much of North America North America, third largest continent (1990 est. pop. 365,000,000), c.9,400,000 sq mi (24,346,000 sq km), the northern of the two continents of the Western Hemisphere. . Florida is subject to periodic outbreaks of SLEV; five epidemics (>20 human clinical cases) have been recorded in south Florida since 1952 (1). The most recent epidemic occurred in 1990 when 226 clinical cases and approximately 30,000 infections were reported throughout south-central Florida. Indian River Indian River, lagoon, c.100 mi (160 km) long, E Fla., parallel to the east coast from N of Titusville to Stuart. Along the lagoon a variety of citrus and vegetable products are grown and transported by small boats to towns on its waterway and those further inland. County was the epicenter of this outbreak (2). The annual dynamics of SLEV in south Florida can be divided into four phases: January March maintenance; April-June amplification; July September early transmission; October-December late transmission (3). The amplification phase involves the epizootic ep·i·zo·ot·ic adj. Affecting a large number of animals at the same time within a particular region or geographic area. Used of a disease. ep cycling of SLEV between mosquito vectors and avian amplification hosts. Amplification is necessary to achieve mosquito infection rates sufficient to cause human epidemics (4). In Florida, resident juvenile and nestling wild birds are the primary amplification hosts of SLEV (5). Young birds are excellent viral amplification hosts because of their inefficient and poorly developed immune systems, reduced mobility, lack of defense, and their sparse feather coverage, which enables blood-feeding by mosquitoes (5). Previously, we analyzed historical sentinel chicken seroconversion seroconversion /se·ro·con·ver·sion/ (-con-ver´zhun) the change of a seronegative test from negative to positive, indicating the development of antibodies in response to immunization or infection. datasets, i.e., measures SLEV transmission, from 1986 to 1991 in Indian River County (6). Above average seroconversion of sentinel chickens, as measured by serum assay for hemagglutination hemagglutination /he·mag·glu·ti·na·tion/ (he?mah-gloo-ti-na´shun) agglutination of erythrocytes. he·mag·glu·ti·na·tion n. inhibition (HI) antibodies to SLEV, has been correlated with clinical disease in humans (1). We used a dynamic hydrology hydrology, study of water and its properties, including its distribution and movement in and through the land areas of the earth. The hydrologic cycle consists of the passage of water from the oceans into the atmosphere by evaporation and transpiration (or model (7) to hindcast mean area water table depth (WTD WTD Wanted WTD Working Time Directive WTD Work to Do WTD Weighted Tail Drop (Cisco) WTD What the Duck (web comic) WTD What the Duck (online comic strip) WTD Week to Date ) in Indian River County for 1986-1991, and compared this model simulation to the sentinel chicken seroconversion data. By using logistic regression In statistics, logistic regression is a regression model for binomially distributed response/dependent variables. It is useful for modeling the probability of an event occurring as a function of other factors. , we found the probability of sentinel chicken seroconversion to be strongly associated with low WTD 17 weeks earlier and higher WTD 2 weeks earlier. A rationale for this empiric relationship was suggested by mosquito collection data, also from Indian River County from 1986 to 1991. Culex Culex /Cu·lex/ (ku´leks) a genus of mosquitoes found throughout the world, many species of which are vectors of disease-producing organisms. Cu·lex n. nigripalpus Theobald is the demonstrated enzootic en·zo·ot·ic adj. Prevalent among or restricted to animals of a specific geographic area. Used of a disease. n. An enzootic disease. enzootic peculiar to or present constantly in a location. See also endemic. and epidemic vector of SLEV in south Florida (8-10). Collections of Cx. nigripalpus were made in the densely vegetated "hammock hammock, suspended bed, usually of netting, canvas, or leather. The hammock and its name were introduced to Europeans by Christopher Columbus, who learned of them from Native Americans. " habitats used by this species for daytime resting. During the driest conditions (i.e., modeled WTDs <-1.45 m) preceding heavy SLEV transmission, the numbers of Cx. nigripalpus dramatically increased (6) (Figure 1). Rather than indicating an increase in mosquito abundance, these data suggest that drought restricts Cx. nigripalpus flight activity to woodland habitats. Extreme droughts in south Florida tend to occur during the spring when nesting wild birds also make use of the hammocks. Thus, drought drives the mosquitoes and birds into contact with one another. This forced interaction of vector mosquitoes and susceptible avian hosts provides an ideal environment for the rapid epizootic amplification of SLEV. Subsequently, when the drought ends and water resources increase, infected mosquitoes and birds disperse from the hammocks and initiate the early transmission phase of the Florida SLEV cycle. [FIGURE 1 OMITTED] We expand on the approach presented in Shaman et al. (6) and further examine the relationship between modeled WTD and SLEV transmission to sentinel chickens in Indian River County, Florida. We define three types of SLEV transmission (incidence, transmission number, and epidemic transmission) and explore the relationship between these categories and modeled WTD for a longer period of record. We then develop a forecast for epidemic SLEV transmission and demonstrate the skill of this forecast. Lastly, we present a real-time forecast of epidemic SLEV transmission for the transmission season of 2002. Modeling Overview and Methods Topographically Based Hydrology Model Hydrologic modeling follows the methods set forth in Shaman et al. (6). See online Appendix A for details (available from http://www.cdc.gov/ncidod/EID/vol10no5/03-0246_appa.htm). The hydrology model was run from January 1949 through June 2002 and provided a daily time series of mean WTD for the study area. Model validation was conducted by using groundwater well measurements and surface (canal) water levels provided by the St. John's Water Management District and U.S. Geological Survey The term geological survey can be used to describe both the conduct of a survey for geological purposes and an institution holding geological information. A geological survey (USGS USGS United States Geological Survey (US Department of the Interior) ) sources. Partitioning of runoff and evapo-transpiration matched bulk estimates derived from USGS sources (11). See Shaman et al. (12) for a complete description of this validation. Sentinel Chicken Data Changes in the annual timing and distribution of SLEV transmission to sentinel chickens have been strongly correlated with SLEV disease in humans (1). We used data from 15 different sentinel flocks, posted in Indian River County from 1978 to 2002 and maintained by personnel from the Indian River Mosquito Control District. For any given year, a maximum of eight flocks were in operation for 5 to 12 months of the year. At each site, four to six sentinel chickens were posted. Figure 2 provides a map of the region of study and flock locations. [FIGURE 2 OMITTED] Generally, a 1.0-mL blood sample was drawn weekly from each bird during peak transmission periods (July through November), and twice a month during the rest of the year. Blood samples were assayed for HI antibodies to SLEV at the Florida Department of Health Florida Department of Health is a category of Government of Florida. Orange County Health Department is one of the branches of Florida Department of Health and Government of Florida. and Rehabilitative Services, Tampa Branch Laboratory. Individual chickens that tested positive for HI antibodies were replaced with fresh ones, and the entire flock was replaced each spring. Categories of SLEV Transmission We define three categories of sentinel chicken seroconversion as transmission incidence, epidemic transmission, and transmission number. In a manner consistent with Shaman et al. (6), we define SLEV transmission incidence as the occurrence of seroconversion among any of the chickens at any site. Each week is treated as a separate measurement, and transmission incidence is a categoric measure: one, if one or more chickens were seropositive seropositive /se·ro·pos·i·tive/ (-poz´i-tiv) showing positive results on serological examination; showing a high level of antibody. se·ro·pos·i·tive adj. ; or zero, if no chickens were seropositive. High rates of sentinel chicken seroconversion are of principal interest to public health workers. These high levels of transmission connote con·note tr.v. con·not·ed, con·not·ing, con·notes 1. To suggest or imply in addition to literal meaning: "The term 'liberal arts' connotes a certain elevation above utilitarian concerns" the existence of large numbers of SLEV-infected mosquitoes and so identify times when humans are at greatest risk. We therefore define this category as epidemic transmission, which uses all the sentinel chickens in aggregate. It, too, is a categoric measure: one if [greater than or equal to] 20% of posted chickens are seropositive in a given week; zero if[greater than or equal to] 20% of the sentinel chickens are seropositive. These two categories represent epidemic level transmission and all other states, respectively (13). Transmission number treats each chicken as a separate measure of SLEV transmission. Thus, for each chicken and week, the transmission number provides a categoric metric: one if the chicken is seropositive; zero if it is seronegative seronegative /se·ro·neg·a·tive/ (-neg´ah-tiv) showing negative results on serological examination; showing a lack of antibody. se·ro·neg·a·tive adj. . For a given week, up to 48 such categoric measures are available. Unlike transmission incidence and epidemic transmission, which give a single weekly categoric value, the transmission number category provides multiple categoric measures at each point in time. These multiple measures are not necessarily independent. See online Appendix B (available from http://www.cdc.gov/ncidod/EID/vol10no5/03-0246_appb.htm) for a description of the methods used to account for this dependence. Empiric Methods All three types of SLEV transmission (transmission incidence, transmission number, and epidemic transmission) were defined as categoric variables. Univariate and bivariate bi·var·i·ate adj. Mathematics Having two variables: bivariate binomial distribution. Adj. 1. logistic regression were used to associate the probability of each of the types of SLEV transmission with single weekly lags of modeled WTD and combinations of two lags of WTD. We defined antecedent ANTECEDENT. Something that goes before. In the construction of laws, agreements, and the like, reference is always to be made to the last antecedent; ad proximun antecedens fiat relatio. as the longer lag and near coincident as the shorter lag. To account for the apparent dependence among chickens in the transmission number category, we performed these logistic regressions using generalized estimating equations with a working correlation ranging from r = 0-0.6, following the methods of Liang and Zeger (14). Dummy variables were also included to account for the 15 sentinel flock sites. Logistic regression of an SLEV transmission category on modeled WTD derives the probability that this type of SLEV transmission will occur: (1) P = [(1+exp(a+ bxWTD)).sup.-1] where P is the probability of SLEV transmission for a given WTD, and a and b are model parameters. See Appendix C online (available from http://www.cdc.gov/ncidod/EID/vol10no5/03-0246_appc.htm) for further description of the empiric methods. Assessment of Forecast Skill The quality of a forecast can be measured formally through an assessment of its skill. Skill refers to the accuracy of a forecast or set of forecasts relative to a standard control forecast. In weather and climate forecasts, often the control forecast is based on historic conditions. These historic conditions constitute a climatology climatology Branch of atmospheric science concerned with describing climate and analyzing the causes and practical consequences of climatic differences and changes. Climatology treats the same atmospheric processes as meteorology, but it also seeks to identify slower-acting , that is, a distribution of possible states. In this study our climatology is the documented frequency of epidemic SLEV transmission for each week of the year, and it is derived from the 1978 to 1997 sentinel chicken record. For each week of the 1978-1997 record, "epidemic transmission," "no epidemic transmission," or "no data" was recorded. The percentage of epidemic transmission that occurred in a given week, for instance, the 28th week of the years 1978-1997, provides the climatologic probability of epidemic SLEV transmission for that week. The climatology is fixed; hence, for each year of a forecast period, the same weekly climatologic values are predicted. We evaluate the skill of our retrospective forecasts of epidemic SLEV transmission using the Brier score A Brier score measures the accuracy of a set of probability assessments. Proposed by Brier (1950), it is the average deviation between predicted probabilities for a set of events and their outcomes, so a lower score represents higher accuracy. (15). The Brier score is designed for use with a probabilistic (probability) probabilistic - Relating to, or governed by, probability. The behaviour of a probabilistic system cannot be predicted exactly but the probability of certain behaviours is known. Such systems may be simulated using pseudorandom numbers. forecast of a dichotomous di·chot·o·mous adj. 1. Divided or dividing into two parts or classifications. 2. Characterized by dichotomy. di·chot predictand (i.e., epidemic SLEV transmission occurred), and is calculated as follows: [MATHEMATICAL EXPRESSION A group of characters or symbols representing a quantity or an operation. See arithmetic expression. NOT REPRODUCIBLE IN ASCII ASCII or American Standard Code for Information Interchange, a set of codes used to represent letters, numbers, a few symbols, and control characters. Originally designed for teletype operations, it has found wide application in computers. .] where fBS is the forecast Brier score, [F.sub.k] is the forecast probability of epidemic SLEV transmission as predicted for week k, [O.sub.k] is the observation of whether epidemic SLEV transmission took place during week k ([O.sub.k] = 1 if epidemic transmission occurred; [O.sub.k] = 0 if epidemic transmission did not occur), and n is the number of forecasts. Similarly, [MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII] where cBS is the climatologic Brier score, and [C.sub.k] is the climatologic probability of epidemic SLEV transmission as predicted for week k. The skill score (SS) is computed directly from the Brier scores. (4) SS = 1 - [fBS/cBS] A skill score of 0 represents no improvement of forecast skill relative to climatology. A skill score greater than 0 demonstrates improvement of the forecast relative to climatology; a skill score of 1 is a perfect forecast. Significance of the skill score value was assessed by using a Monte Carlo Monte Carlo (môNtā` kärlō`), town (1982 pop. 13,150), principality of Monaco, on the Mediterranean Sea and the French Riviera. procedure. The null hypothesis null hypothesis, n theoretical assumption that a given therapy will have results not statistically different from another treatment. null hypothesis, n is that the forecasts have no greater skill than modeled WTD climatology. No skill forecasts were simulated by randomly selecting weekly modeled WTD values from the 1949-1997 simulation record. One thousand such forecasts were made, and a mock SS was calculated for each. From this distribution of mock SS values, significance of the actual SS value was determined. Results Empiric Analysis Figure 3 presents the 1978-1997 time series of weekly modeled WTD and the weekly percentage of posted chickens testing seropositive for HI antibodies. As was shown previously for 1986-1991 (6), SLEV transmission tends to occur during times of high modeled WTD after periods of low modeled WTD. [FIGURE 3 OMITTED] The Table presents the best-fit results, including parameter estimates, significance, and whole model goodness-of-fit for each transmission type and each time period. The relationship for 1986-1991 transmission incidence has been presented before (6). The best-fit results from analysis of the 1986-1991 record all conform to Verb 1. conform to - satisfy a condition or restriction; "Does this paper meet the requirements for the degree?" fit, meet coordinate - be co-ordinated; "These activities coordinate well" the same pattern. Antecedent drought followed by wetting favors transmission incidence, transmission number, and epidemic transmission (p < 0.0001, p < 0.0001, and p < 0.001, respectively). A range of values produces statistically significant logistic regression fits, reflecting the high autocorrelation Autocorrelation The correlation of a variable with itself over successive time intervals. Sometimes called serial correlation. of modeled WTD, i.e., wetness conditions tend to persist. For transmission number, the regression model was significant over the full range of working correlation values (r = 0-0.6). The best-fit model of transmission number is shown for a working correlation of r = 0.3. Probabilities predicted with the 1986-1991 logistic regression model equation for epidemic SLEV transmission range from 0 to nearly 1 when combined with realistic modeled WTD scenarios (Figure 4A). These high probabilities are a consequence of the short record, which is centered upon an epidemic that began in Indian River County. Few other factors contributed to transmission during this period, and consequently there is little noise in the record. [FIGURE 4 OMITTED] The best-fit results from analysis of the longer 1978-1997 model show a slightly different picture. Again, for transmission incidence, antecedent drought and near coincident wetting contribute significantly to whole model goodness-of-fit (p < 0.0001). However, only antecedent drought (best fit 16 weeks) is significantly associated with epidemic SLEV transmission. Near coincident wetting is no longer a statistically significant explanatory variable. For transmission number, both antecedent drought and near coincident wetting contribute significantly over a range of antecedent drought lags (5-13 weeks), near coincident wetting lags (0-3 weeks), and working correlation values (r = 0-0.3). Near coincident wetting is not significant at higher working correlation values (r = 0.4-0.6). We have shown the best-fit model for a working correlation of r = 0.3. Autocorrelation among empiric model residuals was nominal for all but the 1978-1997 transmission incidence model. For instance, weekly autocorrelation for the 1978-1997 epidemic SLEV transmission time series drops to r = 0.42 at lag one and doesn't fall to zero until week 13. However, among the residuals of the 1978-1997 epidemic SLEV transmission regression model, the autocorrelation drops to r = 0.07 at lag one and remains closer to zero for longer lags. These findings suggest that much of the autocorrelation of the 1986-1991 transmission incidence, 1986-1991 epidemic transmission, and 1978-1997 epidemic transmission is explained by modeled WTD. However, additional factors are needed to explain 1978-1997 transmission incidence. Figure 4B shows that the probabilities predicted with the 1978-1997 logistic regression model equation for epidemic SLEV transmission range from 0 to 0.2. Thus, deep drought does not guarantee epidemic SLEV transmission, but instead foretells an increased likelihood of such events. In this longer period of record, other factors, such as avian host susceptibility and host and vector mobility, add noise to the system and complicate the prediction of epidemic SLEV transmission. Still, deep drought does provide a probabilistic predictive measure of the chance of epidemic SLEV transmission. This empiric relationship also has a 16-week lead; we therefore can use this logistic regression model to produce a seasonal forecast. Epidemic SLEV Transmission Forecast, Indian River County, Florida We applied the empirical relationship In science, an empirical relationship is one based solely on observation rather than theory. An empirical relationship requires only confirmatory data irrespective of theoretical basis. established for epidemic SLEV transmission (1978-1997) to TBH TBH To Be Honest TBH The Burning Crusade (gaming, World of Warcraft) TBH Teddy Bear Hospital (project) TBH To Be Hired TBH The Black Hand (online gaming guilds, band) model simulations of WTD for September 1997-March 2002 and produced weekly retrospective forecasts of epidemic SLEV transmission for January 1998 through June 2002. That is, we combined weekly, modeled WTD with the equation (5) P(SLEV+) = [(1 + exp(14.29 + 8.13 * WT[D.sub.16])).sup.-1] where P(SLEV+) is the probability of epidemic SLEV transmission, and WT[D.sub.16] is WTD 16 weeks before. Together, the TBH simulation of WTD and equation 2 provide a weekly probabilistic forecast of the likelihood of epidemic SLEV transmission. Figure 5 presents this time series of weekly, retrospective epidemic SLEV transmission forecast probabilities, shown in conjunction with averaged historic conditions, i.e., the climatology. For most of 1998 through 2002, our retrospective forecast predicts a lower probability of SLEV transmission than would be anticipated from historic conditions. Only during 2000 did forecast probabilities noticeably exceed those of climatology. During January 1998 through June 2002, no epidemic SLEV transmission was recorded in Indian River County. [FIGURE 5 OMITTED] The Brier brier or briar, name sometimes given any thorny plant, more specifically the sweetbrier, and the greenbrier. French brier, or brierroot, is a name for the root of the European white heath so widely used in the manufacture of smoking pipes. skill score was calculated for the weekly January 1998 June 2002 retrospective forecast of epidemic SLEV transmission. A high level of skill is found (SS = 0.461) and is significant (p < 0.001). Real-Time Forecast Having found a high level of skill for our epidemic SLEV transmission forecast, we then developed a real-time forecast of epidemic SLEV transmission in Indian River County during 2002. (This forecast was in real time when this manuscript was prepared and initially submitted.) Model simulations from March to June 2002 were combined with equation 2 and are presented in Figure 6. The probability of epidemic SLEV transmission was predicted to be low (<2%), less than would be expected from climatology. This real-time forecast was accurate; during the fall of 2002, no sentinel chicken SLEV seroconversions occurred in Indian River County. [FIGURE 6 OMITTED] Discussion In this study, we have defined three types of SLEV transmission as measured by sentinel chickens: transmission incidence, transmission number, and epidemic transmission. All three categories of SLEV transmission were found to be empirically associated with modeled WTD as simulated with the TBH model. For the shorter record, 1986-1991, antecedent drought and near coincident wetting were shown to be good predictors of all three transmission categories. These results, combined with the Cx. nigripalpus collection data (Figure 1), support the hypothesis of drought-induced amplification previously described (6). The longer 1978-1997 record accounts for a wider variety of modeled wetness conditions and encompasses a longer, noisier record of sentinel chicken data, in which confounding confounding when the effects of two, or more, processes on results cannot be separated, the results are said to be confounded, a cause of bias in disease studies. confounding factor factors, such as avian host susceptibility and host and vector mobility, may be strongly affecting transmission levels. Consequently, while not providing the same mechanistic insight into amplification dynamics as the shorter 1986-1991 record, empiric relationships derived from the 1978-1997 record provide a more realistic prediction of SLEV transmission based on modeled WTD. For the longer 1978-1997 record, antecedent drought and near coincident wetting were significant predictors of transmission incidence. For transmission number, both antecedent drought and near coincident wetting were also significant predictors, but only for lower working correlation values (r = 0-0.3). Antecedent drought by itself, however, was a significant predictor of transmission number over the full range of working correlation values (data not shown). Lastly, logistic regression analysis of the longer record showed that only antecedent drought was significantly associated with epidemic transmission. Furthermore, for all three categories of SLEV transmission for 1978 to 1997, probabilities predicted using the logistic regression models and realistic simulated WTDs were considerably lower than those for the shorter 1986-1991 record. This finding corroborates the assertion that factors other than surface wetness conditions also control SLEV transmission rates. Consequently, drought-induced amplification may be necessary for high levels of SLEV transmission, but it alone is not a sufficient condition for such an event, nor must it occur locally. The loss of significance for near-coincident wetting might have several causes. Epidemic SLEV transmission is a rare event. For the 1978 to 1997 Indian River County record, epidemic SLEV transmission only took place during the 1990 epidemic and on one occasion in 1997. These 20 years include many wet events, but these events were often not preceded by the drought needed for amplification of SLEV and therefore were not associated with transmission. Other factors could also have been at play, such as avian immunity, mosquito migration, human activity, and land use changes, which might have countered the effect of wetting and reduced its association with epidemic SLEV transmission to levels below significance. However, recent analysis of human cases of SLE SLE systemic lupus erythematosus. SLE abbr. systemic lupus erythematosus Systemic lupus erythematosus (SLE) suggests that with a still larger record, wetting would again be significantly associated with epidemic SLEV transmission (16). Epidemic SLEV transmission, associated with human SLE incidence, is of principal epidemiologic concern. We have presented a forecast of epidemic SLEV transmission, as measured with sentinel chickens, using the empiric association between 1978-1997 epidemic SLEV transmission and modeled WTD and additional simulations of WTD with the topographically based hydrology model. Forecast skill has been demonstrated, and a real-time forecast presented. Because of wet conditions for the winter of 2001-2002 in Indian River County, springtime drought (lowering of WTD) was less severe than usual. As a result, probabilities of epidemic SLEV transmission were predicted to be lower than expected, based on climatology, for the July through October 2002 season. To our knowledge, these analyses are the first application of forecast verification methods to a predictive disease transmission model. This work demonstrates a means by which other empiric models of disease transmission can be tested for predictive skill. We have shown that the TBH model can be used to predict SLEV transmission. Other hydrology models might also be developed and their simulations compared with those of the topographically based hydrology model. Such models would have to capture the spatial and temporal variability of near surface wetness conditions and be easily calibrated cal·i·brate tr.v. cal·i·brat·ed, cal·i·brat·ing, cal·i·brates 1. To check, adjust, or determine by comparison with a standard (the graduations of a quantitative measuring instrument): and computationally efficient. The TBH model was calibrated for 1983 to 2001 (12), but before this period, changes to the Florida landscape may have occurred. These changes, including increased channelization chan·nel·ize tr.v. chan·nel·ized, chan·nel·iz·ing, chan·nel·iz·es 1. To make, form, or cut channels in. 2. To direct through a channel. and urbanization, could be corrupting model simulation accuracy before 1983, and will need to be explored in more detail in the future. A forecast of SLEV transmission should incorporate additional information regarding the dynamics of the avian hosts, mosquito vector, and virus. For instance, monitoring avian host susceptibility to the SLEV, in addition to modeling local hydrology, is needed to determine whether conditions ideal for amplification exist. Remote sensing Deriving digital models of an area on the earth. Using special cameras from airplanes or satellites, either the sun's reflections or the earth's temperature is turned into digital maps of the area. data should also be incorporated to delineate the effects of changes in land use, urbanization, and habitat fragmentation Habitat fragmentation is a process of environmental change important in evolution and conservation biology. As the name implies, it describes the emergence of discontinuities (fragmentation) in an organism's preferred environment (habitat). . Future investigations might also characterize the direct effects of large-scale climate phenomena, such as the El Nino-Southern Oscillation or North Atlantic Oscillation, on SLEV transmission. Such information would help further constrain epidemic SLEV transmission forecasts and permit more accurate identification and prediction of local amplification "hot spots hot spots acute moist dermatitis. " throughout south-central Florida. Such forecasts could be run operationally at the state and county level in conjunction with water management and public health agencies. Forecasts of epidemic SLEV transmission in excess of climatology would then warrant response and the targeting of mosquitoes during the amplification phase. Whether other, past south Florida SLEV epidemics conformed to similar amplification dynamics, epicenters for these epidemics must be identified, and the local hydrology modeled to determine whether a similarly timed drought and wetting pattern preceded SLEV transmission. The findings of such studies will no doubt modify the empirical relationship between modeled local hydrologic conditions and epidemic SLEV transmission (equation 2). Research is also under way to determine whether West Nile virus West Nile virus, microorganism and the infection resulting from it, which typically produces no symptoms or a flulike condition. The virus is a flavivirus and is related to a number of viruses that cause encephalitis. transmission is similarly affected by hydrologic variability. By accounting for the interaction of the physical (climate) and biologic (vector, pathogen, and host) systems, a more robust means of monitoring and forecasting disease should be attained.
Table. Best-fit empiric relationships based on logistic regression
analyses between lags of modeled WTD as simulated by the
topographically based hydrology model and three categories of SLEV
transmissions (a,b)
1986-1991 1986-1991 1986-1991
Transmission Transmission Epidemic
Predictand incidence no. transmission
Antecedent lag 17 14 11
Near coincident 2 0 0
lag
Intercept 19.03 (3.74) 17.50 (1.79) 20.98 (7.07)
Antecedent slope 18.06 (3.65) 14.36 (1.45) 19.56 (7.03)
p value <0.0001 <0.0001 <0.01
Near coincident -6.21 (1.77) -5.51 (0.79) -8.26 (3.85)
slope
p value <0.0001 <0.0001 <0.05
Whole model fit <0.0001 <0.0001 <0.001
(p value)
1978-1997 1978-1997 1978 1997
Transmission Transmission Epidemic
Predictand incidence no. transmission
Antecedent lag 16 8 16
Near coincident 2 2 --
lag
Intercept 2.48 (0.39) 6.33 (0.46) 14.29 (3.50)
Antecedent slope 1.80 (0.36) 2.59 (0.38) 8.13 (2.50)
p value <0.0001 <0.000l <0.005
Near coincident -0.70 (0.34) -0.53 (0.27) --
slope
p value <0.05 <0.05 NS
Whole model fit <0.0001 <0.0001 <0.001
(p value)
(a) Estimates of standard error are given in parentheses. For the
transmission number category, the working correlation is r = 0.3.
(b) WTD, water table depth: SLEV, St. Louis encephalitis virus;
NS, not significant.
Acknowledgments We thank D. Lohmann and B. Cosgrove for provision of the Global Energy and Water Cycle Experiment Continental Scale International Project Land Data Assimilation Recursive Bayesian estimation is known in geosciences applications as data assimilation, perhaps most importantly in weather forecasting and hydrology. Data assimilation proceeds by analysis cycles. System forcing datasets; Lillian Stark and her staff at the Florida Department of Health Tampa Branch Laboratory for their analysis of sentinel chicken and wild bird serum samples; and P. Shaman for many helpful statistical discussions. This research was supported by the National Aeronautics and Space Administration National Aeronautics and Space Administration (NASA), civilian agency of the U.S. federal government with the mission of conducting research and developing operational programs in the areas of space exploration, artificial satellites (see satellite, artificial), Headquarters under the Earth System Science Fellowship, Grant NGT NGT Night NGT National Grid Transco (UK gas transporter) NGT Nominal Group Technique NGT Not Greater Than NGT Next Generation Technology NGT Next Generation Telecom (China) NGT NASA Ground Terminal 5-50323, the National Oceanic and Atmospheric Administration Noun 1. National Oceanic and Atmospheric Administration - an agency in the Department of Commerce that maps the oceans and conserves their living resources; predicts changes to the earth's environment; provides weather reports and forecasts floods and hurricanes and Postdoctoral Program in Climate and Global Change, administered by the University Corporation for Atmospheric Research The University Corporation for Atmospheric Research (UCAR) is a nonprofit corporation founded in 1960 by research institutions with doctoral programs in the atmospheric and related sciences. , and the National Aeronautics and Space Administration Seasonal-to-Interannual Prediction Project at Goddard Space Flight Center The Goddard Space Flight Center (GSFC) is a major NASA space research laboratory established on May 1, 1959 as NASA's first space flight center. GSFC employs approximately 10,000 civil servants and contractors, and is located approximately 6.5 miles northeast of Washington, D.C. . References (1.) Day JF, Stark LM. Frequency of St. Louis encephalitis virus in humans from Florida, USA: 1990-1999. J Med Entomol 2000;37:626-33. (2.) Day JF, Curtis GA. Blood feeding and oviposition oviposition the act of laying or depositing eggs. by Culex nigripalpus (Diptera: Culicidae) before, during, and after a widespread St. Louis encephalitis virus epidemic in Florida. J Med Entomol 1999;36:176-81. (3.) Day JF, Curtis GA. Annual emergence patterns of Culex nigripalpus females before, during, and after a widespread St. Louis encephalitis epidemic in south Florida. J Am Mosq Contr Assoc 1993;9:249-53. (4.) McLean RG, Bowen GS. Vertebrate hosts. In: Monath TP, editor. St. Louis encephalitis. Washington: American Public Health Association The American Public Health Association (APHA) is Washington, D.C.-based professional organization for public health professionals in the United States. Founded in 1872 by Dr. Stephen Smith, APHA has more than 30,000 members worldwide. ; 1980. p. 381-450. (5.) Day JF, Stark LM. Avian serology Serology The division of biological science concerned with antigen-antibody reactions in serum. It properly encompasses any of these reactions, but is often used in a limited sense to denote laboratory diagnostic tests, especially for syphilis. in a St. Louis encephalitis epicenter before, during, and after a widespread epidemic in south Florida, USA. J Med Entomol 1999;36:614-24. (6.) Shaman J, Day JF, Stieglitz M. Drought-induced amplification of St. Louis encephalitis virus, Florida. Emerg Infect Dis 2002;8:575-80. (7.) Stieglitz M, Rind RIND See Reversible ischemic neurological disability. D, Famiglietti J, Rosenzweig C. An efficient approach to modeling the topographic control of surface hydrology for regional and global climate modeling. J Climate 1997;10:118-37. (8.) Chamberlain RW, Sudia WD, Coleman PH, Beadle BEADLE. Eng. law. A messenger or apparitor of a court, who cites persons to appear to what is alleged against them, is so called. LD. Vector studies in the St. Louis encephalitis epidemic. Tampa Bay Tampa Bay, inlet of the Gulf of Mexico, 25 mi (40 km) long and 7 to 12 mi (11.3–19 km) wide, W Fla., separated from the Gulf by numerous small islands; it receives the Hillsborough River. St. area, Florida. Am J Trop Med Hyg 1964;13:456-61. (9.) Dow RP, Coleman PH, Meadows KE, Work TH. Isolation of St. Louis encephalitis viruses from mosquitoes in the Tampa Bay area of Florida during the epidemic of 1962. Am J Trop Med Hyg 1964;13:462-74. (10.) Shroyer DA. The 1990 Florida epidemic of St. Louis encephalitis: virus infection rates in Culex nigripalpus. J Fla Mosq Control Assoc 1991;62:69-71. (11.) Sumner DM. Evapotranspiration evapotranspiration Loss of water from the soil both by evaporation from the soil surface and by transpiration from the leaves of the plants growing on it. Factors that affect the rate of evapotranspiration include the amount of solar radiation, atmospheric vapor pressure, from a cypress and pine forest Pine forest may refer to:
(12.) Shaman J, Stieglitz M, Zebiak S, Cane M. A local forecast of land surface wetness conditions derived from seasonal climate predictions. J Hydromet 2003:4:611-26. (13.) Day JF, Stark LM, Transmission patterns of St. Louis encephalitis and eastern equine encephalitis viruses Eastern equine encephalomyelitis virus (EEE), commonly called sleeping sickness or "Triple E", is a zoonotic alphavirus and arbovirus present in North, Central and South America and the Caribbean. in Florida:1978-1993. J Med Entomol 1996;33:132-9. (14.) Liang K-Y, Zeger SL. Longitudinal data analysis using generalized linear models. Biometrika 1986;73:13-22. (15.) Wilks DS. Statistical methods in the atmospheric sciences. San Diego San Diego (săn dēā`gō), city (1990 pop. 1,110,549), seat of San Diego co., S Calif., on San Diego Bay; inc. 1850. San Diego includes the unincorporated communities of La Jolla and Spring Valley. Coronado is across the bay. : Academic Press; 1995. p. 467. (16.) Shaman J, Day J, Stieglitz M. The association of drought, wetting, and human cases of St. Louis encephalitis virus in south-central Florida. Am J Trop Med Hyg. In press 2004. Dr. Shaman is a National Oceanic and Atmospheric Administration postdoctoral fellow in climate and global change at Harvard University Harvard University, mainly at Cambridge, Mass., including Harvard College, the oldest American college. Harvard College Harvard College, originally for men, was founded in 1636 with a grant from the General Court of the Massachusetts Bay Colony. . His research interests include climatology, hydrology, vector-borne diseases, and mosquito ecology. Address for correspondence: Jeffrey Shaman, Department of Earth and Planetary Sciences. Harvard University, 207 Hoffman Laboratories, 20 Oxford Street. Cambridge, MA 02138, USA; fax: 617-496-7411. email: jshaman@fas.harvard.edu Jeffrey Shaman, * Jonathan F. Day, ([dagger]) Marc Stieglitz, ([double dagger double dagger n. A reference mark ( ) used in printing and writing. Also called diesis.Noun 1. ]) Stephen Zebiak, ([sections]) and Mark Cane Mark Cane is an American climate scientist. He obtained his PhD at MIT in 1975. Current affiliation: Columbia University and Lamont Doherty Earth Observatory. He was involved in the first numerical prediction of El Niño-Southern Oscillation in 1986. ([double dagger]) * Harvard University, Cambridge, Massachusetts This article is about the city of Cambridge in Massachusetts. For the English university town, see Cambridge, England. For other places, see Cambridge (disambiguation). Cambridge, Massachusetts is a city in the Greater Boston area of Massachusetts, United States. , USA; ([dagger]) University of Florida University of Florida is the third-largest university in the United States, with 50,912 students (as of Fall 2006) and has the eighth-largest budget (nearly $1.9 billion per year). UF is home to 16 colleges and more than 150 research centers and institutes. , Gainesville, Florida Gainesville is the largest city and county seat of Alachua County, Florida.GR6 Gainesville is home to the University of Florida, the largest university of the State University System of Florida and the third-largest university in the United States. , USA; ([double dagger]) Columbia University Columbia University, mainly in New York City; founded 1754 as King's College by grant of King George II; first college in New York City, fifth oldest in the United States; one of the eight Ivy League institutions. , New York New York, state, United States New York, Middle Atlantic state of the United States. It is bordered by Vermont, Massachusetts, Connecticut, and the Atlantic Ocean (E), New Jersey and Pennsylvania (S), Lakes Erie and Ontario and the Canadian province of , New York, USA; and ([section]) International Research Institute for Climate Prediction, Palisades, New York Palisades, New York is a very small hamlet, part of the Town of Orangetown, located in southeastern Rockland County, New York. It borders the Hudson River to the east, Rockleigh and Alpine New Jersey to the south, Tappan to the west, and Sparkill to the north. , USA |
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