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Rescentris Releases Version 2.5 of its Semantic Notebook, CERF - The ELN for Biology; CERF Development Kit Gives Clients Control of CERF Extensibility Framework with Ontology Manager.


COLUMBUS, Ohio Columbus is the capital and the largest city of the American state of Ohio. Named for explorer Christopher Columbus, the city was founded in 1812 at the confluence of the Scioto and Olentangy rivers, and assumed the functions of state capital in 1816.  -- Rescentris, Ltd., a leading provider of electronic laboratory notebook (ELN Noun 1. ELN - a Marxist terrorist group formed in 1963 by Colombian intellectuals who were inspired by the Cuban Revolution; responsible for a campaign of mass kidnappings and resistance to the government's efforts to stop the drug trade; "ELN kidnappers target ) software for biology and multi-disciplinary life sciences, today announced the immediate availability of CERF 2.5 and the CERF Development Kit (CERF-DK) to help life sciences organizations better manage their research information. CERF (Collaborative Electronic Research Framework(TM)) is the industry's only ELN built on semantic web A collaboration of the World Wide Web Consortium (W3C) and others to provide a standard for defining data on the Web. The Semantic Web uses XML tags that conform to Resource Description Framework and Web Ontology Language formats (see RDF and OWL).  technologies. The semantic engine in CERF enables it to capture the meaning and relationships in R&D information as well as the experimental context in which data are collected - all transparently, while the scientists do their work.

An ontology ontology: see metaphysics.
ontology

Theory of being as such. It was originally called “first philosophy” by Aristotle. In the 18th century Christian Wolff contrasted ontology, or general metaphysics, with special metaphysical theories
 is defined as a set of concepts and their relationships. The core functions of CERF are encoded declaratively de·clar·a·tive  
adj.
1. Serving to declare or state.

2. Of, relating to, or being an element or construction used to make a statement: a declarative sentence.

n.
 using ontologies. The use of ontologies for semantic representations of research facilitates the transformation of data into actionable and reusable research knowledge. "The lab notebook A lab notebook is a primary record of research. Researchers use a lab notebook to document their hypotheses, experiments and initial analysis or interpretation of these experiments.  is the key interface between scientists and information assets," stated Rescentris CSO (Chief Security Officer) The person in charge of all staff members who are responsible for promulgating, enforcing and administering security policies for all systems within an enterprise or division. , Dr. Jeff Spitzner, "and CERF 2.5 was designed to accomplish much more than just collecting results and creating research records. We believe it is essential to assist scientists through the entire research process and automate as much as possible so they can spend more of their time engaged in innovative science." The CERF Development Kit was designed in collaboration with clients who are already using it to tailor the CERF experience to the needs of their organizations.

The CERF 2.5 Notebook system is engineered for rapid deployment - out of the box, with only minor configuration - to get the client organization up and running productively. Then the CERF Extensibility Framework makes it easy to adapt the solution to the client's specific needs for workflows and research practices. The Ontology Manager is used for Knowledge Representation - to create appropriate scientific data and metadata models, including controlled vocabularies and context-specific forms that provide consistent research annotations. It also manages templates - for a single Notebook entry Noun 1. notebook entry - an entry in a notebook
entry - an item inserted in a written record
 or all the forms, documents, slots, and protocols structured for a complete experiment - set up using form-based tools, but stored and versioned as OWL ontologies and contents packaged in XML XML
 in full Extensible Markup Language.

Markup language developed to be a simplified and more structural version of SGML. It incorporates features of HTML (e.g., hypertext linking), but is designed to overcome some of HTML's limitations.
. The CERF 2.5 system also provides Knowledge Integration. Data-driven services are registered based on resource types and workflows, and the semantic inference engine ensures that user menus are dynamically updated with available actions. Access to external data sources, such as scientific databases, is provided at the CERF Desktop through simple query forms; the connections are set up on the CERF Server using the form-based Integration Manager to create wrappers with minimal effort and maximum reusability.

"CERF is built using open standards such as XML, RDF (Resource Description Framework) A recommendation from the W3C for creating meta-data structures that define data on the Web. RDF is designed to provide a method for classification of data on Web sites in order to improve searching and navigation (see Semantic Web). , and OWL ontologies," stated Dr. Joseph Spitzner, Rescentris CTO (Chief Technical Officer) The executive responsible for the technical direction of an organization. See CIO and salary survey. . "As a result, our clients' information assets are not held hostage, and their data are not locked away in proprietary formats. CERF 2.5 was designed to future-proof research content and manage it in an open, extensible system that is easily supported, configured, and customized by your IT staff or by Rescentris to meet the demands of R&D for today and tomorrow." With CERF, Rescentris principals continue their long history of developing standards-based applications, dating back to their 1997 release of the first XML data standard for life sciences, BSML BSML Bioinformatic Sequence Markup Language , used to represent bioinformatics data.

CERF 2.5 is available immediately with the optional CERF-DK that includes the Extensibility Framework tools, a development server, and Rescentris professional services and training to tailor the system to meet the diverse needs of the organization.

About Rescentris

Rescentris provides ELN and scientific content management software solutions for life sciences R&D organizations. Its cross-platform product, the Collaborative Electronic Research Framework(TM) (CERF), is built on information standards and ontologies to integrate informatics, electronic record-keeping, and knowledge management. Rescentris solutions are designed to enhance productivity and decision making for scientists and R&D managers by capturing knowledge and intellectual property and disseminating it as unified and personalized views of enterprise discovery. CERF enables organizations to create, organize, share, and exploit knowledge assets in a centralized platform while giving users an integrated desktop to do their daily work. Rescentris serves customers in diverse life sciences organizations, including biopharma companies and academic and government labs. See www.rescentris.com for more information.
COPYRIGHT 2006 Business Wire
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Copyright 2006, Gale Group. All rights reserved. Gale Group is a Thomson Corporation Company.

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Publication:Business Wire
Date:Jan 25, 2006
Words:699
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