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Relationship between composition and toxicity of motor vehicle emission samples.


In this study we investigated the statistical relationship between particle and semivolatile organic chemical constituents in gasoline gasoline or petrol, light, volatile mixture of hydrocarbons for use in the internal-combustion engine and as an organic solvent, obtained primarily by fractional distillation and "cracking" of petroleum, but also obtained from natural gas, by  and diesel vehicle exhaust Exhaust may refer to:

In mathematics:
  • Proof by exhaustion, proof by examining all individual cases
  • Exhaustion by compact sets, in analysis, a sequence of compact sets that converges on a given set
 samples, and toxicity toxicity /tox·ic·i·ty/ (tok-sis´i-te) the quality of being poisonous, especially the degree of virulence of a toxic microbe or of a poison.  as measured by inflammation inflammation, reaction of the body to injury or to infectious, allergic, or chemical irritation. The symptoms are redness, swelling, heat, and pain resulting from dilation of the blood vessels in the affected part with loss of plasma and leucocytes (white blood  and tissue damage in rat lungs and mutagenicity mutagenicity /mu·ta·ge·nic·i·ty/ (-je-nis´it-e) the property of being able to induce genetic mutation.

mutagenicity

the property of being able to induce genetic mutation.
 in bacteria. Exhaust samples were collected from "normal" and "high-emitting" gasoline and diesel light-duty vehicles. We employed a combination of principal component analysis (PCA (tool, programming) PCA - A dynamic analyser from DEC giving information on run-time performance and code use. ) and partial least-squares regression regression, in psychology: see defense mechanism.
regression

In statistics, a process for determining a line or curve that best represents the general trend of a data set.
 (PLS See playlist. ; also known as projection to latent Hidden; concealed; that which does not appear upon the face of an item.

For example, a latent defect in the title to a parcel of real property is one that is not discoverable by an inspection of the title made with ordinary care.
 structures) to evaluate the relationships between chemical composition of vehicle exhaust and toxicity. The PLS analysis revealed the chemical constituents covarying most strongly with toxicity and produced models predicting the relative toxicity of the samples with good accuracy. The specific nitro-polycyclic aromatic hydrocarbons Noun 1. aromatic hydrocarbon - a hydrocarbon that contains one or more benzene rings that are characteristic of the benzene series of organic compounds
benzene, benzine, benzol - a colorless liquid hydrocarbon; highly inflammable; carcinogenic; the simplest of the
 important for mutagenicity were the same chemicals that have been implicated im·pli·cate  
tr.v. im·pli·cat·ed, im·pli·cat·ing, im·pli·cates
1. To involve or connect intimately or incriminatingly: evidence that implicates others in the plot.

2.
 by decades of bioassay-directed fractionation fractionation /frac·tion·a·tion/ (frak?shun-a´shun)
1. in radiology, division of the total dose of radiation into small doses administered at intervals.

2.
. These chemicals were not related to lung toxicity, which was associated with organic carbon and select organic compounds that are present in lubricating oil. The results demonstrate the utility of the PCA/PLS approach for evaluating composition-response relationships in complex mixture exposures and also provide a starting point Noun 1. starting point - earliest limiting point
terminus a quo

commencement, get-go, offset, outset, showtime, starting time, beginning, start, kickoff, first - the time at which something is supposed to begin; "they got an early start"; "she knew from the
 for confirming causality causality, in philosophy, the relationship between cause and effect. A distinction is often made between a cause that produces something new (e.g., a moth from a caterpillar) and one that produces a change in an existing substance (e.g.  and determining the mechanisms of the lung effects. Key words: diesel exhaust, gasoline exhaust, hopane, mutagenicity, PAHs, particulate matter particulate matter
n. Abbr. PM
Material suspended in the air in the form of minute solid particles or liquid droplets, especially when considered as an atmospheric pollutant.

Noun 1.
 health effects, principal component analysis, semivolatile organic carbon, sterane Steranes are a class of 4-cyclic compounds derived from steroids or sterols via diagenetic and catagenetic degradation and saturation. They are sometimes used as biomarkers for the presence of eukaryotic cells.

More on steranes from geobiology@mit
, toxicity of motor vehicle emissions. Environ en·vi·ron  
tr.v. en·vi·roned, en·vi·ron·ing, en·vi·rons
To encircle; surround. See Synonyms at surround.



[Middle English envirounen, from Old French environner
 Health Perspect 112:1527-1538 (2004). doi:10.1289/ehp.6976 available via http://dx.doi.org/[Online 15 July 2004]

**********

Mobile source emissions are important contributors to ambient Surrounding. For example, ambient temperature and humidity are atmospheric conditions that exist at the moment. See ambient lighting.  air pollution and have been associated with cancer-related and noncancer-related health effects. Recent work has shown that health effects and ambient air pollution increase with proximity to roadways, suggesting that motor vehicle traffic (engine emissions) contributes a large share to ambient health effects (Nicolai et al. 2003; Pearson et al. 2000; van Vliet et al. 1997; Venn et al. 2001). Two interrelated in·ter·re·late  
tr. & intr.v. in·ter·re·lat·ed, in·ter·re·lat·ing, in·ter·re·lates
To place in or come into mutual relationship.



in
 issues pertaining per·tain  
intr.v. per·tained, per·tain·ing, per·tains
1. To have reference; relate: evidence that pertains to the accident.

2.
 to the health hazards health hazard Occupational safety Any agent or activity posing a potential hazard to health. Cf Physical hazard.  of motor vehicle emissions continue to present serious challenges to manufacturers, regulatory decision makers, toxicologists, and risk assessors. First, it is important to identify the most important contributors to health risk among the myriad Myriad is a classical Greek name for the number 104 = 10 000. In modern English the word refers to an unspecified large quantity.

The term myriad is a progression in the commonly used system of describing numbers using tens and hundreds.
 physical-chemical species contained in emissions. Second, it is important to be able to estimate changes in health risks that will result from changes in the composition of emissions. Both issues are important for ensuring that the most health-relevant components are controlled and that technologic strategies for meeting emissions regulations reduce rather than increase hazards. The current knowledge base does little to support such judgments because there have been few direct comparisons of the health effects of different types of emissions. Moreover, except for bioassay-directed fractionation schemes that have identified nitro-polycyclic aromatic hydrocarbons as major drivers of bacterial bacterial /bac·te·ri·al/ (-al) pertaining to or caused by bacteria.

bacterial

pertaining to or caused by bacteria.


bacterial adhesiveness
see adhesins.
 mutagenicity, few approaches have been used to determine the chemical species driving the health hazards of complex emissions.

We have reported the results of studies in which both bacterial mutagenicity (by Ames tests Ames test
n.
A test in which strains of Salmonella that are unable to synthesize histidine are introduced into a test substance lacking in histidine.
) and lung toxicity assays of inflammation, cytotoxicity cytotoxicity /cy·to·tox·ic·i·ty/ (si?to-tok-sis´i-te) the degree to which an agent possesses a specific destructive action on certain cells or the possession of such action. , and lung tissue damage (Seagrave et al. 2002) were assessed to rank the toxic potency potency /po·ten·cy/ (po´ten-se)
1. the ability of the male to perform coitus.

2. the relationship between the therapeutic effect of a drug and the dose necessary to achieve that effect.

3.
 of motor vehicle exhaust samples of different chemical composition. That work used combined suspensions of particulate par·tic·u·late
adj.
Of or occurring in the form of fine particles.

n.
A particulate substance.



particulate

composed of separate particles.
 material (PM) and vapor-phase semivolatile organic carbon (SVOC SVOC Semi-Volatile Organic Compound
SVOC Southern Vectis Omnibus Company (Isle of Wight, UK) 
) samples collected from a range of in-use (rented from owners) gasoline- and diesel-powered vehicles, including "high-emitting" vehicles. Preliminary studies showed that it was important to include the vapor-phase SVOC because it comprised a large portion of the mass [defined by gravimetric gravimetric /grav·i·met·ric/ (grav?i-me´trik) pertaining to measurement by weight; performed by weight, as a gravimetric method of drug assay.

grav·i·met·ric
adj.
1.
 weight as described by Seagrave et al. (2002)] emitted from some vehicles and could contribute substantially to toxicity as evidenced by evaluation of lung inflammatory responses of separated PM and SVOC samples collected from a traffic tunnel (Seagrave et al. 2001). The samples were combined into seven distinct groups of gasoline and diesel-powered vehicles. There was a 5-fold range in the potency of the samples for lung injury, and samples from high-emitting vehicles (both diesel and gasoline powered) had the highest pulmonary pulmonary /pul·mo·nary/ (pool´mo-nar?e)
1. pertaining to the lungs.

2. pertaining to the pulmonary artery.


pul·mo·nar·y
adj.
Of, relating to, or affecting the lungs.
 toxicity per unit of mass. There was also up to a 10-fold difference in the bacterial mutagenicity among these samples, with no clear difference between the potency of diesel exhaust and gasoline exhaust on the basis of mutations per milligram milligram /mil·li·gram/ (mg) (mil´i-gram) one thousandth (10-3) of a gram.

mil·li·gram
n. Abbr. mg
A metric unit of mass equal to one thousandth (10-3) of a gram.
 of sample.

We also reported the results of detailed compositional measurements of the exhaust samples described above (Zielinska et al. 2004). In the present work, we applied multivariate The use of multiple variables in a forecasting model.  data analysis to determine the relationship between composition and health response. We selected a statistical approach that had been successfully used to determine the key components of organic extracts of diesel exhaust particles causing mutations in bacteria (Eide et al. 2001, 2002; Sjogren et al. 1996) and aryl hydrocarbon receptor The Aryl hydrocarbon receptor (AhR) is member of the family of basic-helix-loop-helix transcription factors. AhR is a cytosolic transcription factor that is normally inactive, bound to several co-chaperones.  induction induction, in electricity and magnetism
induction, in electricity and magnetism, common name for three distinct phenomena.

Electromagnetic induction
 (Sjogren et al. 1996). The combined principal component analysis (PCA) and partial least-squares regression (PLS; also known as projections to latent structures) approach allows analysis of the similarities and differences in the specific health responses (e.g., mutagenicity vs. lung toxicity) relative to composition. The product of this work is an assessment of the ability of the PLS to "explain" the composition-response relationship and an indication of which chemical compounds in the exhaust samples were most strongly associated with the health response.

Materials and Methods

In this article we summarize sum·ma·rize  
intr. & tr.v. sum·ma·rized, sum·ma·riz·ing, sum·ma·riz·es
To make a summary or make a summary of.



sum
 only the general approaches used for collection, chemical characterization A rather long and fancy word for analyzing a system or process and measuring its "characteristics." For example, a Web characterization would yield the number of current sites on the Web, types of sites, annual growth, etc. , and toxicity evaluation of vehicle exhaust samples that have been reported in detail elsewhere (Seagrave et al. 2002; Zielinska et al. 2004). The classifications of vehicle samples, chemical/physical classes measured in these samples, and the toxicologic evaluations conducted (including health response category) are summarized in Table 1.

Emission samples, Particle and vapor-phase SVOC fractions were collected using filters (for particles) and polyurethane polyurethane

Any of a class of very versatile polymers that are made into flexible and rigid foams, fibres, elastomers (elastic polymers), surface coatings, and adhesives.
 foam/XAD-4 resin resin, any of a class of amorphous solids or semisolids. Resins are found in nature and are chiefly of vegetable origin. They are typically light yellow to dark brown in color; tasteless; odorless or faintly aromatic; translucent or transparent; brittle, fracturing  traps (for vapor-phase SVOC), respectively, from diluted di·lute  
tr.v. di·lut·ed, di·lut·ing, di·lutes
1. To make thinner or less concentrated by adding a liquid such as water.

2. To lessen the force, strength, purity, or brilliance of, especially by admixture.
, fresh emissions from vehicles operated on chassis Pronounced "chah-see," it is a physical structure that holds everything or that everything is attached to. A computer's cabinet is often called the chassis.  dynamometers over the unified driving cycle at the Southwest Research Institute Southwest Research Institute (SwRI), headquartered in San Antonio, Texas, is one of the oldest and largest independent, nonprofit, applied research and development (R&D) organizations in the United States. Founded in 1947 by Thomas Slick, Jr.  (San Antonio San Antonio (săn ăntō`nēō, əntōn`), city (1990 pop. 935,933), seat of Bexar co., S central Tex., at the source of the San Antonio River; inc. 1837. , TX, USA) (Whitney 2000, Zielinska et al. 2004). The unified driving cycle is a high-speed, rapid-acceleration test cycle, consisting of a 300-sec cold start phase followed by a 1,135-sec hot stabilized sta·bi·lize  
v. sta·bi·lized, sta·bi·liz·ing, sta·bi·liz·es

v.tr.
1. To make stable or steadfast.

2.
 phase, and a 300-sec hot start phase, which is a repeat of the first phase. The maximum speed employed in the cycle was 67.2 mph, with a maximum acceleration of 6.9 mph/sec. Five vehicles or composite groups of vehicles were included: a group of five "normal-emitting" gasoline vehicles (G); a group of three normal-emitting diesel vehicles (D); two "high-emitting" single gasoline vehicles emitting e·mit  
tr.v. e·mit·ted, e·mit·ting, e·mits
1. To give or send out (matter or energy): isotopes that emit radioactive particles; a stove emitting heat.

2.
a.
 white (WG) or black (BG) smoke; and a single high-emitting diesel vehicle (HD). Specific emission rates for these vehicles are reported elsewhere (Zielinska et al. 2004). All vehicles were in-use light- or medium-duty passenger cars, pickup Pickup

A gain in yield made by selling one bond and buying another. Also referred to as "yield pickup."

Notes:
When the present yield is relatively low compared to the longer-term yields, pickups will be done by investors trying to increase the yield and duration of their
 trucks, or vans, ranging from 1976 to 2000 model years and were tested with fuel and crankcase crank·case  
n.
The metal case enclosing the crankshaft and associated parts in a reciprocating engine.


crankcase
Noun

the metal case that encloses the crankshaft in an internal-combustion engine
 oil as received (recruited in San Antonio, TX, USA). The normal-emitting groups were sampled while operating both at room temperature and at approximately 30[degrees]F (~ -1[degrees]C; [G.sub.30], [D.sub.30]).

Chemical characterization of emission samples. The chemical composition of the particle and SVOC fractions of each of the seven samples was analyzed an·a·lyze  
tr.v. an·a·lyzed, an·a·lyz·ing, an·a·lyz·es
1. To examine methodically by separating into parts and studying their interrelations.

2. Chemistry To make a chemical analysis of.

3.
 at the Desert Research Institute (Reno, NV, USA) as described elsewhere (Zielinska et al. 2004). Analyses included temperature fractions of organic and elemental elemental

emanating from or pertaining to elements.


elemental diet
see elemental diet.
 carbon, elements (metals and associated analytes), inorganic ions Inorganic ions in animals and plants are ions necessary for vital cellular activity. In body tissues, ions are also known as electrolytes, essential for the electrical activity needed to support muscle contractions and neuron activation.  (sulfate sulfate, chemical compound containing the sulfate (SO4) radical. Sulfates are salts or esters of sulfuric acid, H2SO4, formed by replacing one or both of the hydrogens with a metal (e.g., sodium) or a radical (e.g., ammonium or ethyl). , nitrate nitrate, chemical compound containing the nitrate (NO3) radical. Nitrates are salts or esters of nitric acid, HNO3, formed by replacing the hydrogen with a metal (e.g., sodium or potassium) or a radical (e.g., ammonium or ethyl). ), and speciation speciation

Formation of new and distinct species, whereby a single evolutionary line splits into two or more genetically independent ones. One of the fundamental processes of evolution, speciation may occur in many ways.
 of resolvable organic compounds. The temperature fractions were obtained using the IMPROVE thermal carbon analysis technique (Chow et al. 2001), in which eight discrete fractions of carbon are vaporized va·por·ize  
tr. & intr.v. va·por·ized, va·por·iz·ing, va·por·iz·es
To convert or be converted into vapor.



va
 in a changing temperature and helium/oxygen atmosphere. The temperature fractions are grouped into four "organic" and four "elemental" carbon designations as shown in Table 2. Although these are not explicitly chemical fractions (related to both chemical and physical properties), they provide data on differences among the emission samples and have been used in source apportionment The process by which legislative seats are distributed among units entitled to representation; determination of the number of representatives that a state, county, or other subdivision may send to a legislative body. The U.S.  modeling studies to differentiate among motor vehicle and other types of emissions (e.g., Maykut et al. 2003; Watson et al. 2002). The organic species measured focused on components that have been used in previous studies to illustrate differences among motor vehicle and other types of emissions. The classes of organic compounds included polycyclic aromatic hydrocarbons polycyclic aromatic hydrocarbon
n.
Any of a class of carcinogenic organic molecules that consist of three or more rings containing carbon and hydrogen and that are commonly produced by fossil fuel combustion.
 (PAHs), ranging in molecular weight from 128 to 300 Da, a mass range that spans from compounds that are considered to be exclusively gases to species found exclusively in the particle phase. Several subclasses of PAHs, including oxygenated PAHs (oxyPAHs: ketones Ketones
Poisonous acidic chemicals produced by the body when fat instead of glucose is burned for energy. Breakdown of fat occurs when not enough insulin is present to channel glucose into body cells.

Mentioned in: Diabetic Ketoacidosis, Urinalysis
, aldehydes, quinones), nitroPAHs, and sulfur-containing PAHs were measured. Hopanes and steranes, two classes of compounds that are found in lubricating oil (McDonald et al. 2003; Rogge et al. 1993), were also measured. A total of 184 composition variables were measured.

Toxicologic evaluations. Aliquots of the PM and SVOC extracts (in acetone acetone (ăs`ĭtōn), dimethyl ketone (dīmĕth`əl kē`tōn), or 2-propanone (prō`pənōn), CH3COCH3 ) were provided (by Desert Research Institute) to the Lovelace Respiratory Research Institute for toxicity testing [description of sample extraction and handling described briefly below and in more detail by Seagrave et al. (2002)]. The PM and SVOC samples were combined (original PM and SVOC were extracted separately) and either mixed with Salmonella salmonella

Any of the rod-shaped, gram-negative, non-oxygen-requiring bacteria that make up the genus Salmonella. Their main habitat is the intestinal tract of humans and other animals.
 culture media (Ames bacterial reverse mutation mutation, in biology, a sudden, random change in a gene, or unit of hereditary material, that can alter an inheritable characteristic. Most mutations are not beneficial, since any change in the delicate balance of an organism having a high level of adaptation to its  assay) or instilled into lungs of F344/CRL rats (Charles River Charles River

River, eastern Massachusetts, U.S. The longest river wholly in the state, it flows into Boston Bay after a course of about 80 mi (130 km). Navigable for about 7 mi (11 km), its estuary separates the cities of Boston and Cambridge.
 Laboratory, Wilmington, MA, USA) over a range of total mass (PM plus SVOC) doses (Seagrave et al. 2002). Responses in rat lungs were evaluated at 4 hr (the cytokine Cytokine

Any of a group of soluble proteins that are released by a cell to send messages which are delivered to the same cell (autocrine), an adjacent cell (paracrine), or a distant cell (endocrine).
 MIP-2) or 24 hr (all other responses) after dosing, as described previously (Seagrave et al. 2002). Lungs were removed and weighed, and then cells, protein, enzymes, and chemical mediators of inflammation were measured in bronchoalveolar lavage Bronchoalveolar lavage
A way of obtaining a sample of fluid from the airways by inserting a flexible tube through the windpipe. Used to diagnose the type of lung disease.
 collected from the right cardiac, diaphragmatic diaphragmatic

pertaining to the diaphragm.


diaphragmatic abscess
in the cow produces a syndrome of humped back, pain on percussion over the xiphoid area, fever and leukocytosis.
, and intermediate lobes. The left lung

Main article: Lung


The Left lung is divided into two lobes, an upper and a lower, by the oblique fissure, which extends from the costal to the mediastinal surface of the lung both above and below the hilus.
 was then fixed and examined by light microscopy microscopy /mi·cros·co·py/ (mi-kros´kah-pe) examination under or observation by means of the microscope.

mi·cros·co·py
n.
1. The study of microscopes.

2.
 for histologic his·tol·o·gy  
n. pl. his·tol·o·gies
1. The anatomical study of the microscopic structure of animal and plant tissues.

2. The microscopic structure of tissue.
 evidence of inflammation and tissue damage. In all, 11 lung response variables were measured. Bacterial mutagenicity was evaluated in Ames tester strains TA98 and TA100, both with and without metabolic met·a·bol·ic
adj.
Of, relating to, or resulting from metabolism.


Metabolic
Refers to the chemical processes of an organ or organism.
 activation activation /ac·ti·va·tion/ (ak?ti-va´shun)
1. the act or process of rendering active.

2. the transformation of a proenzyme into an active enzyme by the action of a kinase or another enzyme.

3.
 by a liver microsome microsome /mi·cro·some/ (mi´krah-som) any of the vesicular fragments of endoplasmic reticulum formed after disruption and centrifugation of cells.microso´mal

mi·cro·some
n.
 preparation (S9) (Seagrave et al. 2002). Dose-response relationships The Dose-response relationship describes the change in effect on an organism caused by differing levels of exposure (or doses) to a stressor (usually a chemical). This may apply to individuals (eg: a small amount has no observable effect, a large amount is fatal), or to populations  were analyzed for each variable and for each emission sample, and (toxic) potency factors were derived from these analyses (Seagrave et al. 2002).

Normalization In relational database management, a process that breaks down data into record groups for efficient processing. There are six stages. By the third stage (third normal form), data are identified only by the key field in their record.  of data for multivariate data analysis. Data were normalized to weight fraction before statistical analysis by dividing the composition values by the sum of PM and SVOC mass (i.e., composition per unit of total mass). PM was the mass determined on the filter and extracted into solution. As discussed previously (Seagrave et al. 2002), the extraction protocol used to transfer PM into suspension involved agitation agitation /ag·i·ta·tion/ (aj?i-ta´shun) excessive, purposeless cognitive and motor activity or restlessness, usually associated with a state of tension or anxiety. Called also psychomotor a. , gentle brushing, and sonication sonication /son·i·ca·tion/ (son?i-ka´shun) exposure to sound waves; disruption of bacteria by exposure to high-frequency sound waves.

son·i·ca·tion
n.
 in acetone. Analysis of aliquots of the particle extracts was used to measure the recovery of the mass of material in solution compared with the mass weighed on filters before extraction. The recovery for PM was 80-100% for gasoline exhaust samples and 65-70% for diesel exhaust samples. The decreased extraction efficiency for the diesel exhaust samples was likely caused by difficulty in removing elemental carbon from the filters. The SVOC mass was determined by gravimetric analysis gravimetric analysis
n.
The determination of the quantities of the constituents of a compound.
 of spikes spikes

see peplomer.
 of extracts that were evaporated evaporated

reduced in volume by evaporation; concentrated to a denser form.
 to dryness to remove the solvent solvent, constituent of a solution that acts as a dissolving agent. In solutions of solids or gases in a liquid, the liquid is the solvent. In all other solutions (i.e.  (acetone). Because the compositional data In statistics, compositional data are quantitative descriptions of the parts of some whole, conveying exclusively relative information.

This definition, given by John Aitchison (1986) has several consequences:
  • A compositional data point, or composition
 are not reported as weight fractions elsewhere (Zielinska et al. 2004 reported emission rates), we include discussion on the mass composition of the samples and also include the data as Appendix I of this report.

Multivariate data analysis (pattern recognition and prediction). The compositional data were structured in an X-matrix with one row per exhaust sample (i.e., a total of seven rows) and one column per predictor variable Noun 1. predictor variable - a variable that can be used to predict the value of another variable (as in statistical regression)
variable quantity, variable - a quantity that can assume any of a set of values
 (initially, 184 compositional parameters). The mutagenicity and lung toxicity data were structured in a Y-matrix with seven rows and one column per response variable (i.e., a total of 15 responses). Multivariate data analysis was performed with Simca-P 10.0 (Umetrics, Umea, Sweden). PCA (Jackson 1991) was performed on the X-matrix to evaluate similarities between mixtures and on the Y-matrix to group responses. PLS was used for the regression modeling to correlate the measured responses to the compositional parameters (Wold et al. 1984). PLS was used for the regression modeling because it overcomes the problems of intercorrelated predictor variables and data matrices where the number of variables exceeds the number of samples (Kettaneh-Wold 1992; Kvalheim 1989).

The purpose of PCA is to define "structure," or patterns, in data that exist in multiple dimensions. Both the PCA and PLS techniques use the same basic data simplification principles by projecting linear planes (or hyperplanes) into a multidimensional mul·ti·di·men·sion·al  
adj.
Of, relating to, or having several dimensions.



multi·di·men
 grouping of data (Kettaneh-Wold 1992; Kvalheim 1989). A principal component or a PLS component is a straight least-squares regression line Noun 1. regression line - a smooth curve fitted to the set of paired data in regression analysis; for linear regression the curve is a straight line
regression curve
 (or plane) through the sample points in the multidimensional space (Sjogren et al. 1996). Each component will "explain" a portion of the variance in the data set. Typically, multiple components are required to explain most of the variance. However, it is desirable to have few principal or PLS components relative to the number of samples for optimal confidence in the outcome of the analysis.

The primary difference between PCA and PLS is that PCA is performed on one data matrix (e.g., X or Y) and PLS evaluates both (X and Y) simultaneously to both develop a predictive model (e.g., predict Y from X) and to evaluate relationships between specific X and Y variables (e.g., which chemicals covary with toxicity?). PCA is first used to identify characteristics of data in either the X- or Y-matrix. The principal outcome of this analysis is the identification of data that "duster" together similarly and thus are assumed to have a systematic relationship. This application of PCA is illustrated in "Results" by the finding that mutagenicity and pulmonary toxicity variables did not duster together but that variables within each category did cluster together. This indicated that separate PLS models would be needed for mutagenicity and toxicity.

A PCA analysis was first conducted on the 7 x 184 X-matrix to evaluate similarities between samples by "score plots" and on the 7 x 15 Y-matrix to determine groupings (similarities) among response variables by "loading plots." This grouping was used to segregate seg·re·gate  
v. seg·re·gat·ed, seg·re·gat·ing, seg·re·gates

v.tr.
1. To separate or isolate from others or from a main body or group. See Synonyms at isolate.

2.
 the response variables into covarying groups of responses that could be analyzed by PLS. PLS was initially carried out with all 184 predictor variables; however, because of the low number of samples, PLS had to be carried out on subsets and groups of predictor variables, as explained in "Results."

Before analyses, the data were mean centered and scaled to unit variance as described previously (Jackson 1991; Wold et al. 1984). Data distributions were evaluated and determined to require no further normalization (e.g., log transformations) before analysis. The results of the PLS analysis were evaluated in terms of both goodness of fit Goodness of fit means how well a statistical model fits a set of observations. Measures of goodness of fit typically summarize the discrepancy between observed values and the values expected under the model in question. Such measures can be used in statistical hypothesis testing, e.  ([R.sup.2], analogous analogous /anal·o·gous/ (ah-nal´ah-gus) resembling or similar in some respects, as in function or appearance, but not in origin or development.

a·nal·o·gous
adj.
 to Pearson correlation coefficient Correlation Coefficient

A measure that determines the degree to which two variable's movements are associated.

The correlation coefficient is calculated as:
) and goodness of prediction ([Q.sup.2], determined by cross-validation procedures described in Appendix 2). Each response end point was modeled individually (15 total), and the model results were evaluated by cross-validation procedures. To ascertain that the overall PLS models contained systematic (nonrandom) associations, we validated val·i·date  
tr.v. val·i·dat·ed, val·i·dat·ing, val·i·dates
1. To declare or make legally valid.

2. To mark with an indication of official sanction.

3.
 the models by performing PLS after randomizing (reordering re·or·der  
v. re·or·dered, re·or·der·ing, re·or·ders

v.tr.
1. To order (the same goods) again.

2. To straighten out or put in order again.

3. To rearrange.

v.
) the values in the Y-matrix as described previously (Eide et al. 2001). This validation See validate.

validation - The stage in the software life-cycle at the end of the development process where software is evaluated to ensure that it complies with the requirements.
 procedure is referred to as validation by response permutation One possible combination of items out of a larger set of items. For example, with the set of numbers 1, 2 and 3, there are six possible permutations: 12, 21, 13, 31, 23 and 32.

(mathematics) permutation - 1.
 (van der Voet 1994). A more detailed description of the validation approach and an example for the validation of one model are included in Appendix 2.

Results

Composition of emission samples. The mass composition of the emission samples is summarized in Figure 1. These results have been reported elsewhere (Zielinska et al. 2004) but only in units of mass/mile traveled. The normal-emitter and black-smoker gasoline samples were composed primarily of vapor-phase SVOC mass, whereas the others were composed primarily of PM. The PM composition ranged from approximately 20 to 95% organic carbon, with no obvious distinction in the proportion of organic carbon between diesel- and gasolinepowered vehicles. This plot does not portray por·tray  
tr.v. por·trayed, por·tray·ing, por·trays
1. To depict or represent pictorially; make a picture of.

2. To depict or describe in words.

3. To represent dramatically, as on the stage.
 the differences in specific organic classes; the data for individual chemical species are reported in Appendix 1.

[FIGURE 1 OMITTED]

The proportions of elements and PAH PAH, PAHA aminohippuric acid.

PAH
abbr.
para-aminohippuric acid


PAH 1 Polycyclic aromatic hydrocarbon, see there 2. Pulmonary artery HTN
 compounds among these samples were variable, and there was no clear difference in the classifications of vehicles (e.g., high emitter One side of a bipolar transistor. See collector.  vs. normal emitter or gasoline vs. diesel) that emit TO EMIT. To put out; to send forth,
     2. The tenth section of the first article of the constitution, contains various prohibitions, among which is the following: No state shall emit bills of credit.
 higher proportions (as a weight fraction) of any of these classes. In contrast, the higher-emitting vehicles dearly showed higher proportions of the hopane and sterane compounds (components of lubricating oils).

Principal component analysis. The loading plot shown in Figure 2 was obtained from PCA on the toxicity data and shows the clustering of the 15 different toxicity measurements according to according to
prep.
1. As stated or indicated by; on the authority of: according to historians.

2. In keeping with: according to instructions.

3.
 their similarity Similarity is some degree of symmetry in either analogy and resemblance between two or more concepts or objects. The notion of similarity rests either on exact or approximate repetitions of patterns in the compared items.  in responses to the exhaust samples. The 11 lung toxicity responses clustered together in one group, whereas the four bacterial mutagenicity responses occurred at different spots. This indicated that the lung toxicity responses were associated with similar chemical components and that these components were different from those associated with the mutagenicity responses. As a consequence, regression modeling with PLS was done with the 11 lung toxicity end points simultaneously (it is advantageous to use multiple responses because they will support one another in the model), and the four mutagenicity end points were modeled separately.

[FIGURE 2 OMITTED]

PLS analysis of lung toxicity data. The goal in developing the PLS model was to explain the most variation in the data using the smallest number of PLS components. Initially, PLS was performed with all 184 compositional variables versus the 11 lung toxicity responses. Although it was possible to obtain a PLS model with high [R.sup.2] and relatively high [Q.sup.2] with all 184 predictor variables, validation by response permutation showed that the overall PLS model could be due to chance because of the large number of compositional variables relative to the relatively small number of samples. To alleviate Alleviate
To make something easier to be endured.

Mentioned in: Kinesiology, Applied
 this, we performed the PLS analysis after grouping most of the individual compositional variables by chemical class (e.g., hopanes) or subclass In programming, to add custom processing to an existing function or subroutine by hooking into the routine at a predefined point and adding additional lines of code.

subclass - derived class
 (e.g., two-ring PAHs).

The number of variables was reduced from 184 to 34, and PLS was carried out with these 34 variables versus the 11 lung toxicity responses. The resulting PLS model performance was acceptable ([R.sup.2] = 0.95; [Q.sup.2] = 0.35) with only two PLS components and was hence used only to obtain first-pass indication of which groups of compounds associated (covaried) most strongly with the lung toxicity responses. According to loadings and PLS regression coefficients Regression coefficient

Term yielded by regression analysis that indicates the sensitivity of the dependent variable to a particular independent variable. See: Parameter.


regression coefficient 
 (not shown), the variables that associated most strongly with the 11 toxicity responses were particulate organic carbon, select thermal fractions of the carbon analysis, and the hopane and sterane classes of compounds.

The 34-variable PLS model was followed by a PLS model in which some compositional variables were ungrouped into their individual compounds (the hopanes and steranes). This gave a final 68-variable X-matrix (Table 2) that performed well (Figure 3 shows performance for each lung toxicity measurement; overall model performance: [R.sup.2] = 0.93; [Q.sup.2] = 0.72), accounting for approximately 70% of the variation in the data by just two PLS components (53 and 15% by the first and second PLS components, respectively). Each of the 11 toxicity response PLS models showed satisfactory-to-excellent performance in the validation by permutation tests (results of validations not shown, except the example given in Appendix 2). The model performance indicators for each lung response category (Figure 3) indicated that the model had better predictive capability for direct measures of inflammation (e.g., cell count, histopathology his·to·pa·thol·o·gy
n.
The science concerned with the cytologic and histologic structure of abnormal or diseased tissue.


Histopathology
The study of diseased tissues at a minute (microscopic) level.
) than for indirect indicators (e.g., MIP-2). An example of the high quality of the model prediction is shown in Figure 4, which illustrates the observed versus predicted response for histologic evidence of lung inflammation.

[FIGURES 3-4 OMITTED]

Once the predictive model was determined, the strength of association (PLS loadings) between the chemical components and the individual lung toxicity responses was evaluated in a loading plot (Figure 5). This plot, analogous to the plot shown in Figure 2 for the 15 toxicity variables, shows the clustering of toxicity and chemical component variables, illustrating the chemical components that were most closely associated (covaried) with lung toxicity. The plot combines the covariance Covariance

A measure of the degree to which returns on two risky assets move in tandem. A positive covariance means that asset returns move together. A negative covariance means returns vary inversely.
 from the two PLS components that were required for the 68-variable model. The chemical variables have been abbreviated or grouped in the plot, and the full names associated with the abbreviations are given in Table 2 (the abbreviations give an indication of the chemical class). The components that had the strongest association with lung toxicity were most of the hopanes, steranes, and particle-phase organic carbon. The hopanes and steranes are compounds that are found in crude oil and are thus emitted as part of the crankcase oil emissions. These compounds are derived from the diagenesis diagenesis

Sum of all processes, chiefly chemical, that produce changes in a sediment after its deposition but before its final lithification. Usually, not all the minerals in a sediment are in chemical equilibrium, so changes in interstitial water composition or in
 of plant materials (e.g., conversion of phytosterols to steranes). Their characteristic structures have been described elsewhere (e.g., Rogge et al. 1993). The analysis of fuel and crankcase oil collected from the vehicles studied here (reported in Zielinska et al. 2004) showed that the hopanes and steranes were in high concentrations in oil (as expected) and only trace amounts of the steranes were observed in fuel. High-oil-burning vehicles will also show large amounts of particle-phase organic carbon. The most volatile thermal fractions from the carbon analysis along with one elemental carbon temperature fraction and nitrate also covaried with the lung toxicity responses. Other components, namely, the metals and PAHs, had little or no correlation with the lung responses.

[FIGURE 5 OMITTED]

PLS analysis of mutagenicity data. PLS of the mutagenicity data using either the complete set (184) or the first reduced set (34) of chemical variables in the X data matrix was performed without satisfactory results. The 34-variable data set grouped together the chemical components that were known, based on previous studies, to be mutagenic mutagenic

inducing genetic mutation.
. However, grouping by compound classes did not reveal associations between composition and mutagenicity and did not yield satisfactory performance in the PLS model. A separate strategy for configuring the X data matrix was adapted that ungrouped the individual nitro- and oxy-PAHs known to be direct mutagens and used them in a reduced data set of 23 variables (Table 3). The best model performance ([R.sup.2] = 0.98; [Q.sup.2] = 0.73) was obtained with these variables applied to the TA98 and TA100 strains without $9 metabolic activation. Figure 6 shows the observed versus predicted mutagenicity with this PLS model for strain TA100. The models for TA98 and TA100 could explain approximately 60% of the variation with three PLS components. In contrast, PLS models did not perform well for TA98 and TA100 strains with metabolic activation (not shown). This was not surprising because most of the mutagens that have been implicated in engine exhaust are direct acting (e.g., do not require metabolic activation). In addition, the presence of $9 may suppress To stop something or someone; to prevent, prohibit, or subdue.

To suppress evidence is to keep it from being admitted at trial by showing either that it was illegally obtained or that it is irrelevant.
 mutagenicity by inactivating or adsorbing certain mutagens (Shah Shah is a Persian term for a monarch (ruler) that has been adopted in many other languages. This term is a Post Islamic Revolution term for monarchs in Iran which is replaced by valie faghih or Supreme Leader.  et al. 1990).

[FIGURE 6 OMITTED]

Figure 7 shows the loading plot with combined mutagenicity and chemical variables. Similar to what was expected based on the known mutagenicity of these compounds, the particle-bound higher-molecular-weight nitro-PAH compounds had the highest association with mutagenicity, whereas most of the oxy-PAHs and volatile nitro-PAHs had poor or no association. The similarity between the PLS model associations identified in this study and chemical components that were previously known to drive mutagenicity helped validate To prove something to be sound or logical. Also to certify conformance to a standard. Contrast with "verify," which means to prove something to be correct.

For example, data entry validity checking determines whether the data make sense (numbers fall within a range, numeric data
 the PCA/PLS approach for evaluating composition-response relationships for lung toxicity, for which composition-response relationships were not known in advance.

[FIGURE 7 OMITTED]

Discussion

The present study represents a step toward a better understanding of the physical-chemical components of engine emissions presenting the greatest lung health hazards. There is growing recognition of the need to develop a more integrated understanding of the air quality-health relationship (Mauderly 2003; National Research Council 2001), but disentangling the relative roles of air contaminants in complex environmental pollution and source emissions has progressed slowly. Except for the biodirected fractionation approach that identified certain nitro-PAHs as driving bacterial mutagenic responses, there has been little progress in determining the specific species causing the effects of physically and chemically complex combustion combustion, rapid chemical reaction of two or more substances with a characteristic liberation of heat and light; it is commonly called burning. The burning of a fuel (e.g., wood, coal, oil, or natural gas) in air is a familiar example of combustion.  emission mixtures. Most epidemiology epidemiology, field of medicine concerned with the study of epidemics, outbreaks of disease that affect large numbers of people. Epidemiologists, using sophisticated statistical analyses, field investigations, and complex laboratory techniques, investigate the cause  and toxicology toxicology, study of poisons, or toxins, from the standpoint of detection, isolation, identification, and determination of their effects on the human body. Toxicology may be considered the branch of pharmacology devoted to the study of the poisonous effects of drugs.  has focused on specific pollutants pollutants

see environmental pollution.
 (e.g., unspeciated PM or nitrogen dioxide nitrogen dioxide
n.
A poisonous brown gas, NO2, often found in smog and automobile exhaust fumes and synthesized for use as a nitrating agent, a catalyst, and an oxidizing agent.

Noun 1.
) or treated complex emission exposure atmospheres as a single material. Studies comparing the effects of filtered and unfiltered Please wikify (format) this article or section as suggested in the Guide to layout and the Manual of Style.
Remove this template after wikifying. This article has been tagged since
 emissions (Maejima et al. 2001) or the effects of the elemental carbon and extractable organic fractions of diesel soot soot, black or dull brown deposit of fine powder resulting from incomplete combustion of fuel of high carbon content, e.g., coal, wood, and oil. It consists chiefly of amorphous carbon and tarry substances that cause it to adhere to surfaces.  (Nel et al. 2001) are examples of simplified biodirected fractionation but fall far short of testing the roles of the full range of emission species. Epidemiologists commonly employ multivariate analyses involving multiple environmental pollutants environmental pollutants,
n.pl the substances and conditions, including noise, that adversely affect the health and well-being of the people within a community.
, but have data for only a few pollutant pol·lut·ant
n.
Something that pollutes, especially a waste material that contaminates air, soil, or water.
 species and usually focus on determining the influence of copollutants on estimates of the effects of the single pollutant (or class, e.g., PM) of chief interest (Samet et al. 2000). In a study conceptually more similar to the present study, Wellenius et al. (2003) applied multivariate regression modeling to data from multiple exposures of dogs to concentrated ambient air PM to identify an association between silicon and cardiac effects, but studied only the PM fraction of pollution and did not have data on speciated organic compounds. There are no previous reports of the use of multivariate analyses to disentangle the roles of both the vapor vapor /va·por/ (va´por) pl. vapo´res, vapors   [L.]
1. steam, gas, or exhalation.

2. an atmospheric dispersion of a substance that in its normal state is liquid or solid.
 and PM organic phases of engine emissions.

This study, although certainly an over-simplification of environmental exposures to inhaled in·hale  
v. in·haled, in·hal·ing, in·hales

v.tr.
1. To draw (air or smoke, for example) into the lungs by breathing; inspire.

2.
 emissions, demonstrates that PCA/PLS has potential for exploring complex exposure composition-health response associations, given a suitable data set. The utility of this approach in identifying putative Alleged; supposed; reputed.

A putative father is the individual who is alleged to be the father of an illegitimate child.

A putative marriage is one that has been contracted in Good Faith and pursuant to ignorance, by one or both parties, that certain
 causal agents Noun 1. causal agent - any entity that produces an effect or is responsible for events or results
causal agency, cause

physical entity - an entity that has physical existence
 in diesel exhaust samples had been demonstrated but with only a single health response (mutagenicity) and a larger number of samples (Eide et al. 2002). A challenge in applying PLS in the present study was the inclusion of many health responses (15) and composition variables (184) but only seven samples--a very practical situation in view of the limited sample (or exposure) number and diversity typical of environmental studies. The approach worked well largely because of success in grouping covarying composition and response variables and reducing their relationships into a number of principal components smaller than the number of samples. Grouping compositional components by class, however, has the disadvantage of making the often-false assumption that all species within the class are equally toxic per unit of mass or that the proportions among the grouped compounds are similar. This assumption was certainly not true for mutagenicity, in which case total nitro-PAH mass was poorly predictive, but foreknowledge fore·knowl·edge  
n.
Knowledge or awareness of something before its existence or occurrence; prescience.


foreknowledge
Noun

knowledge of something before it actually happens

Noun 1.
 of the mutagenicity of particular species allowed development of a more focused and highly predictive model. In the absence of little previous information on the contributions of individual components, as was the case for lung toxicity, iterative it·er·a·tive  
adj.
1. Characterized by or involving repetition, recurrence, reiteration, or repetitiousness.

2. Grammar Frequentative.

Noun 1.
 approaches to grouping the composition into classes and disaggregating classes into individual compounds can be used to explore and optimize optimize - optimisation  models. The small number of samples also raised the possibility that apparently meaningful composition-response relationships could reflect random (nonsystematic) statistical associations. The cross-validation and confirmatory steps were critical to developing confidence that the associations portrayed por·tray  
tr.v. por·trayed, por·tray·ing, por·trays
1. To depict or represent pictorially; make a picture of.

2. To depict or describe in words.

3. To represent dramatically, as on the stage.
 by the models having the best fit and predictive performance were in fact systematic (nonrandom). Overall, the results suggested that PCA/PLS can be useful for identifying composition-response associations for complex exposures even when the number of exposure cases is small. An alternative to grouping and variable selection is hierarchical A structure made up of different levels like a company organization chart. The higher levels have control or precedence over the lower levels. Hierarchical structures are a one-to-many relationship; each item having one or more items below it.  PLS [described by Wold et al. (1996)], which was used (not shown) to confirm the conclusions of the PCA/PLS results presented in this article.

The use of collected and processed samples, wherein where·in  
adv.
In what way; how: Wherein have we sinned?

conj.
1. In which location; where: the country wherein those people live.

2.
 acetone was used to extract species from the collected exhaust material, was a limitation of this study. First, the exhaust collections account for only a portion of the exhaust. Although attempts were made to quantitatively remove 100% of the PM from the filters, only approximately 65-70% of the PM from diesel exhaust samples with high amounts of inorgarlic carbon could be removed. Although the vapor-phase SVOCs were collected, the samples did not include the most volatile vapor and gas components of the exhaust. In addition, it is known that chemical artifacts artifacts

see specimen artifacts.
 can be induced induced /in·duced/ (in-dldbomacst´)
1. produced artificially.

2. produced by induction.

induced,
adj artificially caused to occur.


induced

induction.
 during sample collection and processing (Arey et al. 1988), and it is possible that there were potentially important compositional differences between the collected samples used for this study and the original emissions. However, confidence in the present results derives from the fact that the hopanes and steranes having the strongest associations with toxicity are not formed by artifact A distortion in an image or sound caused by a limitation or malfunction in the hardware or software. Artifacts may or may not be easily detectable. Under intense inspection, one might find artifacts all the time, but a few pixels out of balance or a few milliseconds of abnormal sound , are chemically stable (not prone to decomposition decomposition /de·com·po·si·tion/ (de-kom?pah-zish´un) the separation of compound bodies into their constituent principles.

de·com·po·si·tion
n.
1.
), and are known components of lubricating oil. Thus, although the roles of components that might have been lost during sample processing could not be tested, the components most strongly associated with the lung responses were extremely unlikely to be artifacts.

Instillation instillation /in·stil·la·tion/ (in?sti-la´shun) administration of a liquid drop by drop.

instillation

administration of a liquid drop by drop.
 of extracted material into the lung has limitations in evaluation of the health hazard of materials that are inhaled in the environment. The instillation of collected non-volatile material could not accurately mimic the particle size-dependent deposition Deposition

Christ is taken from the cross and enshrouded. [N.T.: Matthew 27:57–60; Christian Art: Appleton, 55]

See : Passion of Christ
 pattern of inhaled PM. The comparative utility of dosing by inhalation inhalation /in·ha·la·tion/ (in?hah-la´shun)
1. the drawing of air or other substances into the lungs.inhala´tional

2. the drawing of an aerosolized drug into the lungs with the breath.

3.
 and instillation has been reviewed (Driscoll et al. 2000), and although inhalation remains the "gold standard" for hazard assessment, instillation has proven useful for comparing effects among samples and screening for potential cause-effect relationships. Exposure of cultured cells is another alternative to inhalation for comparative toxicity screening, but work preceding the present analysis demonstrated that lung responses to instilled samples and responses of cultured epithelial cells Epithelial cells
Cells that form a thin surface coating on the outside of a body structure.

Mentioned in: Corneal Transplantation
 and lung macrophages Macrophages
White blood cells whose job is to destroy invading microorganisms. Listeria monocytogenes avoids being killed and can multiply within the macrophage.
 to the same samples gave quite different sample rankings (Seagrave et al. 2003). Compared with cell culture, lung instillation was considered the more relevant approach for identifying potential public health hazards public health hazard A chemical or other substance known to be hazardous, based on the effects of long-term exposures thereto . In view of the difficulty, cost, and time requirements of conducting inhalation exposures to a wide range of vehicle emissions, the study provided a test of the utility of a practical, albeit limited, approach to identifying chemical composition-toxicity associations warranting closer examination.

However good the models developed from the present sample set might be, caution must be exercised in extrapolating these results broadly to all gasoline and diesel engine emissions. The concordance concordance /con·cor·dance/ (-kord´ins) in genetics, the occurrence of a given trait in both members of a twin pair.concor´dant

con·cor·dance
n.
 of the present results for mutagenicity with pre-existing information on the importance of nitrogenated PAHs in different combustion emissions (e.g., Lewtas et al. 1992) suggests that the mutagenicity model might be broadly applicable to normal- and high-emitting gasoline and diesel engines and lends confidence that the lung toxicity results are also likely to be valid beyond this sample set. However, it is clear that lung toxicity was driven largely by the coincident co·in·ci·dent  
adj.
1. Occupying the same area in space or happening at the same time: a series of coincident events. See Synonyms at contemporary.

2.
 differences in composition and toxicity between the samples from high-emitting and normal-emitting vehicles. The finding that lubricating oil tracers Tracers

Refers to investment trusts which are populated by corporate bonds. In October 2001, Morgan Stanley's Tradable Custodial Receipts (Tracers) was launched. Tracers contain a number of coporate bonds and credit default swaps which are selected for liquidity and diversity.
 were highly associated with lung toxicity in this sample set does not necessarily mean that oil emissions would be the major determinant determinant, a polynomial expression that is inherent in the entries of a square matrix. The size n of the square matrix, as determined from the number of entries in any row or column, is called the order of the determinant.  of lung toxicity in all engine emissions, and especially among emissions from engines having low oil consumption. The addition of more samples to the analysis, and especially samples differing even more markedly in composition, would bolster This article is about the pillow called a bolster. For other meanings of the word "bolster", see bolster (disambiguation).

A bolster (etymology: Middle English, derived from Old English, and before that the Germanic word bulgstraz
 confidence in the results and their applicability across a broader spectrum of engine emissions. Regardless, the present results strongly indicate that attention should be given to oil-derived as well as fuel-derived emissions and suggest that as total emissions from fuel combustion continue to fall, oil-derived emissions could contribute relatively more to any residual health hazards.

There is little information on the effects of motor oil in the lung. Subchronic inhalation exposure of rats to high concentrations of aerosolized Adj. 1. aerosolized - in the form of ultramicroscopic solid or liquid particles dispersed or suspended in air or gas
aerosolised

gaseous - existing as or having characteristics of a gas; "steam is water is the gaseous state"
 petroleum oils, including a formulation formulation /for·mu·la·tion/ (for?mu-la´shun) the act or product of formulating.

American Law Institute Formulation
 representing unused motor oil, produced only modest toxicity (Dalbey 2001). It is likely that the toxicity of motor oil increases with use. Zielinska et al. (2004) analyzed the composition of fuel and crankcase oil from the vehicles used in the present study. They reported that diesel fuel was enriched in light and semivolatile PAHs compared with gasoline fuel. In contrast, used oil from the gasoline-powered vehicles in this study was enriched in PAHs, includiug heavy, particle-phase PAHs, compared with used diesel oil. Lubricating oil in the gasoline vehicles apparently serves as a "sink" for the partitioning To divide a resource or application into smaller pieces. See partition, application partitioning and PDQ.  of combustion- or fuel-derived components; thus, it is important to consider the time in use of oil in studies of the contribution of oil components to the toxicity of engine emissions. Only one study has investigated the toxicity of used motor oil; Costa and Amdur (1979) reported a 28% increase in pulmonary resistance in guinea pigs guinea pig (gĭn`ē), domesticated form of the cavy, Cavia porcellus, a South American rodent. It is unrelated to the pig; the name may refer to its shrill squeal.  exposed to used motor oil, but the variability in the pulmonary measurements rendered the difference from control animals insignificant. Clearly, more work needs to be done to investigate the toxicity of used motor oil as it is emitted in motor vehicle emissions.

A final caveat is that the statistical composition-response associations resulting from this work do not prove causality. There is considerable information indicating that nitro-PAHs cause mutations in bacteria, but there is little information on the effects of hopanes and steranes in the lung. It is possible that these putative agents could have covaried in mass concentration with unknown proximal proximal /prox·i·mal/ (-mil) nearest to a point of reference, as to a center or median line or to the point of attachment or origin.

prox·i·mal
adj.
 causal causal /cau·sal/ (kaw´z'l) pertaining to, involving, or indicating a cause.

causal

relating to or emanating from cause.
 species, rather than actually causing the responses. Although the composition of the samples was determined in detail, the measured mass by organic speciation accounted for only a small percentage (average ~ 10%) of the total SVOC + PM mass. Additional samples having different toxicity and chemical composition would strengthen the confidence in the observed associations. The causality of specific chemical classes or components of exhaust can be examined in complementary studies, including exposure to inhaled emissions containing different contributions from crankcase oil, "doping doping, in electronics: see semiconductor.


Altering the electrical conductivity of a semiconductor material, such as silicon, by chemically combining it with foreign elements.
" samples with the putative causal agents, and/or progressive fractionation and testing of samples (i.e., bioassay Bioassay

A method for the quantitation of the effects on a biological system by its exposure to a substance, as well as the quantitation of the concentration of a substance by some observable effect on a biological system.
 directed fractionation).

The bioassay-directed fractionation approach may be useful for confirming and further evaluating the components that correlate with pulmonary toxicity. However, an important consideration in applying bioassay-directed fractionation for pulmonary toxicity is the much larger effort and cost of the in vivo in vivo /in vi·vo/ (ve´vo) [L.] within the living body.

in vi·vo
adj.
Within a living organism.



in vivo adv.
 assays relative to the simpler, less expensive bacterial mutagenicity assays that have been used. As mentioned above, in vitro in vitro /in vi·tro/ (in ve´tro) [L.] within a glass; observable in a test tube; in an artificial environment.

in vi·tro
adj.
In an artificial environment outside a living organism.
 testing with lung cells ranked the samples quite differently from the in vivo results (Seagrave et al. 2003). Because in vivo toxicity should be more relevant to human health hazard than in vitro results, it appears unlikely that biodirected fractionation for nonmutagenic lung toxicity can be done using in vitro assays.

Conclusions

Despite its several limitations, this study provides important insights into the physical-chemical components of engine emissions that most strongly influence the toxicity of inhaled emissions. We extend the previous conclusion (Seagrave et al. 2002) that high-emitting vehicles contribute disproportionately dis·pro·por·tion·ate  
adj.
Out of proportion, as in size, shape, or amount.



dispro·por
 to the health hazards of engine emissions, to conclude now that crankcase oil-derived, particle-associated organic compounds may contribute strongly to the inflammatory effects of inhaled emissions from high-emitting vehicles. Importantly, the chemicals most closely associated with pulmonary toxicity were different from the chemicals (e.g., nitro-PAHs and oxy-PAHs such as quinones) that were associated with bacterial mutagenicity. This is especially important considering the small amount of information available on chemicals that are associated with pulmonary toxicity. Further work is warranted to confirm the causality of specific classes and compounds, to confirm that oil-derived components are important to the toxicity of inhaled (as well as instilled) emissions, and to determine the relative importance of oil- versus fuel-derived components to the health hazards of emissions from a broader range of normal- and high-emitting vehicles. Moreover, we conclude that the PCA/PLS analytical analytical, analytic

pertaining to or emanating from analysis.


analytical control
control of confounding by analysis of the results of a trial or test.
 strategy shows promise for disentangling composition-response associations, even when the exposures are extremely complex, the number of exposures is limited, and multiple responses are measured. In such situations, the success of the approach hinges Hinges may refer to:
  • Plural form of hinge, a mechanical device that connects two solid objects, allowing a rotation between them.
  • Hinges, a commune of the Pas-de-Calais département, in northern France
 on the extent to which composition and response variables can be lumped into covarying groups such that predictive models require a number of principal components substantially less than the number of exposures.
Appendix 1. Entire compositional data set presented as weight fraction.

                                        BG          WG          HD

Total PM and SVOC
  Particle mass                       0.288877    0.689480    0.628759
  SVOC mass                           0.711123    0.310520    0.371241
Inorganic ions
  Chloride                            0.000891    0.000661    0.000017
  Nitrate                             0.000294    0.001022    0.000345
  Sulfate                             0.002643    0.002143    0.003073
  Ammonium                            0.001337    0.001251    0.001060
  Sodium                              0.000099    0.000227    0.000516
Carbon
  Particle organic carbon mass        0.195937    0.657895    0.488888
  Elemental carbon                    0.044261    0.020826    0.130267
  Total carbon                        0.207543    0.569073    0.537674
Carbon splits
  O1TC                                0.087617    0.197504    0.267370
  O2TC                                0.066411    0.297777    0.140208
  O3TC                                0.012191    0.032741    0.033965
  O4TC                                0.009070    0.009965    0.009971
  OPTC                                0.020649    0.119907    0.037376
  E1TC                                0.059643    0.110620    0.035683
  E2TC                                0.001662    0.009845    0.125607
  E3TC                                0.000164    0.000285    0.000121
Transition metals
  Titanium                            0.000008    0.000000    0.000000
  Vanadium                            0.000000    0.000004    0.000002
  Chromium                            0.000088    0.000009    0.000020
  Manganese                           0.000161    0.000008    0.000003
  Iron mass                           0.022771    0.000475    0.000280
  Cobalt                              0.000002    0.000003    0.000006
  Nickel                              0.000054    0.000002    0.000005
  Copper                              0.000352    0.000049    0.000002
  Zinc                                0.002677    0.000536    0.000389
  Yttrium                             0.000006    0.000007    0.000000
  Zirconium                           0.000030    0.000018    0.000000
  Molybdenum                          0.000017    0.000000    0.000000
  Palladium                           0.000022    0.000000    0.000003
  Silver                              0.000021    0.000000    0.000035
  Cadmium                             0.000012    0.000000    0.000000
  Lanthanum                           0.000000    0.000000    0.000000
  Gold                                0.000020    0.000004    0.000025
  Mercury                             0.000002    0.000009    0.000021
Other metals
  Magnesium                           0.000831    0.000449    0.000110
  Aluminum mass                       0.000254    0.000000    0.000000
  Potassium                           0.000069    0.000000    0.000000
  Calcium                             0.001574    0.000304    0.000668
  Gallium                             0.000003    0.000006    0.000018
  Rubidium                            0.000004    0.000008    0.000005
  Strontium                           0.000000    0.000003    0.000008
  Indium                              0.000028    0.000101    0.000107
  Barium                              0.000064    0.000234    0.000000
  Thallium                            0.000000    0.000025    0.000012
  Lead                                0.004843    0.000034    0.000046
  Uranium                             0.000001    0.000007    0.000021
Metalloids
  Silicon mass                        0.005000    0.000951    0.000918
  Arsenic                             0.000000    0.000000    0.000000
  Tin                                 0.000050    0.000064    0.000033
  Antimony                            0.000006    0.000031    0.000172
Nonmetal elements
  Sulfur                              0.002354    0.001825    0.001508
  Chlorine                            0.000726    0.000008    0.000016
  Phosphorous                         0.001334    0.000274    0.000152
  Selenium                            0.000001    0.000002    0.000006
  Bromine                             0.000028    0.000004    0.000003
Bicyclic or two-ring PAH Organic
    Compounds
  Naphthalene                         0.003309    0.003459    0.000626
  2-Menaphthalene                     0.001595    0.002445    0.000997
  1-Menaphthalene                     0.001034    0.002018    0.001099
  2,6 + 2,7-Dimenaphthalene           0.003518    0.002303    0.000676
  1,6 + 1,3+1,7-
    Dimethylnaphthalene               0.004080    0.003833    0.001158
  2,3 + 1,4+1,5-Dimenaphthalene       0.000883    0.001516    0.000371
  1,2-Dimethylnaphthalene             0.000401    0.000984    0.000195
  1-Ethyl-2-methylnaphthalene         0.002846    0.002836    0.000218
  Biphenyl                            0.001059    0.000927    0.000379
  2-Methylbiphenyl                    0.000169    0.000157    0.000102
  3-Methylbiphenyl                    0.000233    0.001011    0.000539
  4-Methylbiphenyl                    0.000104    0.000519    0.000207
  Bibenzyl                            0.000792    0.004328    0.000068
  [alpha]-Trimethylnaphthalene        0.000427    0.001258    0.000304
  1-Ethyl-2-methylnaphthalene         0.014773    0.003354    0.000028
  [beta]-Trimethylnaphthalene         0.000285    0.000986    0.000481
  [gamma]-Trimethylnaphthalene        0.000177    0.000925    0.000336
  2-Ethyl-l-methylnaphthalene         0.000020    0.000114    0.000009
  [epsilon]-Trimethylnaphthalene      0.000111    0.000475    0.000296
  f-Trimethylnaphthalene              0.000119    0.000455    0.000258
  2,3,5-Trimethylnaphthalene          0.000172    0.001039    0.000509
  2,4,5-Trimethylnaphthalene          0.000057    0.000399    0.000054
  j-Trimethyl naphtha lene            0.000048    0.000306    0.000125
  1,4,5-Trimethylnaphthalene          0.000644    0.000408    0.000065
  1,2,8-Trimethylnaphthalene          0.000295    0.000213    0.000011
Tricyclic or three-ring PAH
    organic compounds
  Acenaphthylene                      0.002691    0.004103    0.000115
  Acenaphthene                        0.000280    0.000414    0.000046
  Fluorene                            0.000879    0.003382    0.000238
  Phenanthrene                        0.001121    0.001538    0.000546
  [alpha]-Methylfluorene              0.000187    0.000616    0.000218
  1-Methylfluorene                    0.000126    0.000471    0.000166
  [beta]-Methylfluorene               0.000062    0.000177    0.000037
  [alpha]-Methyl phenanthrene         0.000159    0.000513    0.000238
  2-Methyl phenanthrene               0.000188    0.000629    0.000238
  [gamma]-Methyl phenanthrene         0.000176    0.000601    0.000135
  1-Methylphenanthrene                0.000147    0.000491    0.000110
  3,6-Dimethylphenanthrene            0.000031    0.000135    0.000058
  [alpha]-Dimethylphenanthrene        0.000052    0.000234    0.000071
  [beta]-Dimethylphenanthrene         0.000029    0.000138    0.000035
  [gamma]-Dimethylphenanthrene        0.000116    0.000606    0.000125
  1,7-Dimethyl phenanthrene           0.000073    0.000392    0.000057
  d-Dimethylphenanthrene              0.000024    0.000131    0.000026
  [epsilon]-Dimethylphenanthrene      0.000053    0.000353    0.000037
  Anthracene                          0.000228    0.000438    0.000041
  9-Methylanthracene                  0.000028    0.000098    0.000001
  Retene                              0.000010    0.000005    0.000003
Tetracyclic or four-ring PAH
    organic compounds
  2,3-Benzofluorene                   0.000156    0.001283    0.000003
  Fluoranthene                        0.000454    0.000778    0.000026
  Pyrene                              0.000344    0.000409    0.000058
  1-Methylfluorene +
    a-methylfluorene                  0.000002    0.000012    0.000001
  b-Methylpyrene +
    b-methylfluorene                  0.000122    0.000851    0.000009
  c-Methylpyrene +
    c-methylfluorene                  0.000084    0.000620    0.000002
  4-Methylpyrene                      0.000027    0.000109    0.000010
  1-Methylpyrene                      0.000023    0.000127    0.000006
  Benzo[c]phenanthrene                0.000032    0.000101    0.000001
  Benz[a]anthracene                   0.000065    0.000173    0.000002
  7-Methylbenz[a]anthracene           0.000001    0.000002    0.000000
  Chrysene                            0.000093    0.000250    0.000006
  5+6-Methyl chrysene                 0.000008    0.000055    0.000001
Five-ring PAH organic compounds
  Benzo[b+j+k]FL                      0.000071    0.000137    0.000003
  7-Methylbenzo[a]pyrene              0.000001    0.000003    0.000000
  Benzo[e]pyrene                      0.000031    0.000090    0.000002
  Perylene                            0.000010    0.000023    0.000000
  Benzo[a]pyrene                      0.000038    0.000099    0.000001
Six-ring PAH organic compounds
  Indeno[123-cd]pyrene                0.000035    0.000071    0.000001
  Benzo[ghi]perylene                  0.000104    0.000107    0.000002
  Dibenz[ah+ac]anthracene             0.000004    0.000015    0.000000
Seven-ring PAH organic compounds
  Coronene                            0.000056    0.000007    0.000001
Oxygenated PAH organic compounds
  9-Fluorenone                        0.007703    0.001677    0.000001
  Xanthone                            0.000000    0.000060    0.000071
  Acenaphthenequinone                 0.000000    0.000018    0.000002
  Perinaphthenone                     0.000000    0.000000    0.000020
  Anthraquinone                       0.000103    0.000466    0.000001
  9-Anthraldehyde                     0.000033    0.000000    0.000035
  Benz[a]anthracene-7,12-dione        0.000003    0.000050    0.000000
Sulfur-containing PAH
  Benzonaphthothiopene                0.000005    0.000064    0.000001
Nitro PAH organic compounds
  1-Nitronaphthalene                  0.000012    0.000007    0.000012
  2-Nitronaphthalene                  0.000005    0.000002    0.000002
  2-Methyl-1-nitronaphthalene         0.000001    0.000001    0.000000
  [alpha]-Methyl-1-
    nitronaphthalene                  0.000001    0.000001    0.000000
  [beta]-Methyl-l-nitronaphthalene    0.000003    0.000008    0.000003
  2-Nitrobiphenyl                     0.000000    0.000000    0.000000
  4-Nitrobiphenyl                     0.000005    0.000002    0.000012
  5-Nitroacenaphthene                 0.000000    0.000000    0.000000
  9-Nitroanthracene                   0.000000    0.000000    0.000000
  2-Nitrofluoranthene                 0.000000    0.000000    0.000000
  3-Nitrofluoranthene                 0.000000    0.000000    0.000000
  1-Nitropyrene                       0.000001    0.000001    0.000002
  7-Nitrobenz[a]anthracene            0.000000    0.000001    0.000000
  6-Nitrochrysene                     0.000002    0.000000    0.000001
  6-Nitrobenzo[a]pyrene               0.000000    0.000000    0.000001
Hopane/sterane organic compounds
  C27-20S-13[beta](H),17[alpha]
    (H)-diasterane                    0.000010    0.000011    0.000010
  C27-20R-13[beta](H),17[alpha]
    (H)-diasterane                    0.000007    0.000006    0.000005
  C27-20S-13[alpha](H),17[beta]
    (H)-diasterane                    0.000003    0.000003    0.000003
  C27-20R-13[alpha](H),17[beta]
    (H)-diasterane                    0.000004    0.000006    0.000004
  C28-20S-13[beta](H),17[alpha]
    (H)-diasterane                    0.000005    0.000004    0.000001
  C27-20S-5[alpha](H),14[alpha]
    (H)-cholestane                    0.000019    0.000007    0.000001
  C27-20R-5[alpha](H),14[beta]
    (H)-cholestane                    0.000019    0.000014    0.000018
  C27-20S-5[alpha](H),14[beta]
    (H),17[beta](H)-cholestane        0.000007    0.000009    0.000012
  C27-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-cholestane       0.000019    0.000022    0.000020
  C28-20S-5[alpha](H),14[alpha]
    (H),17[alpha](H)-ergostane        0.000003    0.000005    0.000003
  C28-20R-5[alpha](H),14[beta](H),
    17[beta](H)-ergostane             0.000007    0.000008    0.000010
  C29-20R-13[alpha](H),17[beta]
    (H)-diasterane                    0.000008    0.000016    0.000023
  C27-Tetracyclic terpane             0.000010    0.000016    0.000037
  C28-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-ergostane        0.000004    0.000007    0.000008
  C27-Tetracyclic terpane             0.000003    0.000002    0.000000
  C28-Tetracyclic terpane             0.000009    0.000007    0.000144
  C29-20S-5[alpha](H),14[alpha]
    (H),17[alpha](H)-stigmastane      0.000005    0.000012    0.000014
  C28-Tetracyclic terpane             0.000003    0.000019    0.000001
  C29-20R-5[alpha](H),14[beta](H),
    17[beta](H)-stigmastane           0.000010    0.000015    0.000021
  C29-20S-5[alpha](H),14[beta](H),
    17[beta](H)-stigmastane           0.000006    0.000010    0.000013
  18[alpha](H),21[beta](H)-22,29,
    30-trisnorhopane                  0.000002    0.000002    0.000009
  17[alpha](H),18[alpha](H),
    21[beta](H)-25,28,
    30-trisnorhopane                  0.000001    0.000002    0.000006
  C29-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-stigmastane      0.000008    0.000015    0.000016
  17[alpha](H),21[beta](H)-22,29,
    30-trisnorhopane                  0.000042    0.000083    0.000106
  17[alpha](H),18[alpha](H),
    21[beta](H)-28,30-bisnorhopane   0.0000010   0.0000022   0.0000019
  17[alpha](H),21[beta]
    (H)-30-norhopane                 0.0000319   0.0000690   0.0000000
  18[alpha](H),21[beta]
    (H)-30-norneohopane              0.0000040   0.0000099   0.0000027
  17[alpha](H),21[beta](H)-hopane    0.0000029   0.0000066   0.0000076
  17[beta](H),21[alpha](H)-hopane    0.0000020   0.0000023   0.0000081
  22S-17[alpha](H),21[beta]
    (H)-30-homohopane                0.0000146   0.0000345   0.0000514
  22R-17[alpha](H),21[beta]
    (H)-30-homohopane                0.0000090   0.0000258   0.0000351
  17[beta](H),21[beta](H)-hopane     0.0000031   0.0000123   0.0000040
  27S-17[alpha](H),21[beta](H)-30,
    31-bishomohopane                 0.0000072   0.0000199   0.0000544
  22R-17[alpha](H),21[beta](H)-30,
    31-bishomohopane                 0.0000045   0.0000136   0.0000342
  22S-17[alpha](H),21[beta](H)-30,
    31,32-trishomohopane             0.0000044   0.0000155   0.0000156
  22R-17[alpha](H),21[beta](H)-30,
   31,32-trishomohopane              0.0000032   0.0000098   0.0000093

                                         G       [G.sub.30]

Total PM and SVOC
  Particle mass                       0.162128     0.295583
  SVOC mass                           0.837872     0.704417
Inorganic ions
  Chloride                            0.001062     0.001106
  Nitrate                             0.000273     0.000422
  Sulfate                             0.004721     0.013193
  Ammonium                            0.004087     0.009031
  Sodium                              0.000001     0.000000
Carbon
  Particle organic carbon mass        0.084029     0.100675
  Elemental carbon                    0.040269     0.148137
  Total carbon                        0.110293     0.232034
Carbon splits
  O1TC                                0.031775     0.045685
  O2TC                                0.014997     0.018800
  O3TC                                0.013365     0.014883
  O4TC                                0.010214     0.013101
  OPTC                                0.013678     0.008207
  OPTC                                0.043630     0.053664
  E2TC                                0.007894     0.101237
  E3TC                                0.000233     0.000108
Transition metals
  Titanium                            0.000016     0.000004
  Vanadium                            0.000003     0.000018
  Chromium                            0.000051     0.000107
  Manganese                           0.000064     0.000086
  Iron mass                           0.012046     0.012934
  Cobalt                              0.000000     0.000000
  Nickel                              0.000029     0.000056
  Copper                              0.000119     0.000110
  Zinc                                0.001604     0.001206
  Yttrium                             0.000002     0.000003
  Zirconium                           0.000024     0.000054
  Molybdenum                          0.000002     0.000004
  Palladium                           0.000001     0.000001
  Silver                              0.000009     0.000000
  Cadmium                             0.000001     0.000010
  Lanthanum                           0.000020     0.000000
  Gold                                0.000016     0.000018
  Mercury                             0.000002     0.000001
Other metals
  Magnesium                           0.000296     0.000133
  Aluminum mass                       0.000292     0.000259
  Potassium                           0.000146     0.000087
  Calcium                             0.001825     0.001369
  Gallium                             0.000000     0.000001
  Rubidium                            0.000002     0.000003
  Strontium                           0.000004     0.000002
  Indium                              0.000012     0.000005
  Barium                              0.000101     0.000033
  Thallium                            0.000005     0.000003
  Lead                                0.000264     0.000397
  Uranium                             0.000004     0.000000
Metalloids
  Silicon mass                        0.007752     0.002787
  Arsenic                             0.000001     0.000002
  Tin                                 0.000032     0.000023
  Antimony                            0.000009     0.000004
Nonmetal elements
  Sulfur                              0.001716     0.002100
  Chlorine                            0.000236     0.000601
  Phosphorous                         0.000978     0.000591
  Selenium                            0.000003     0.000002
  Bromine                             0.000004     0.000001
Bicyclic or two-ring PAH Organic
    Compounds
  Naphthalene                         0.045334     0.003114
  2-Menaphthalene                     0.017146     0.002901
  1-Menaphthalene                     0.016027     0.002357
  2,6 + 2,7-Dimenaphthalene           0.008528     0.006724
  1,6 + 1,3+1,7-
    Dimethylnaphthalene               0.012884     0.009602
  2,3 + 1,4+1,5-Dimenaphthalene       0.004195     0.003289
  1,2-Dimethylnaphthalene             0.001914     0.001984
  1-Ethyl-2-methylnaphthalene         0.004541     0.004886
  Biphenyl                            0.005099     0.002949
  2-Methylbiphenyl                    0.000821     0.000306
  3-Methylbiphenyl                    0.005404     0.001538
  4-Methylbiphenyl                    0.002470     0.000749
  Bibenzyl                            0.006136     0.004549
  [alpha]-Trimethylnaphthalene        0.004647     0.002628
  1-Ethyl-2-methylnaphthalene         0.039013     0.033539
  [beta]-Trimethylnaphthalene         0.004565     0.002411
  [gamma]-Trimethylnaphthalene        0.004009     0.001965
  2-Ethyl-l-methylnaphthalene         0.000169     0.000150
  [epsilon]-Trimethylnaphthalene      0.002788     0.001094
  f-Trimethylnaphthalene              0.002878     0.001180
  2,3,5-Trimethylnaphthalene          0.005509     0.002367
  2,4,5-Trimethylnaphthalene          0.001224     0.000795
  j-Trimethyl naphtha lene            0.001293     0.000505
  1,4,5-Trimethylnaphthalene          0.002682     0.002074
  1,2,8-Trimethylnaphthalene          0.001438     0.001124
Tricyclic or three-ring PAH
    organic compounds
  Acenaphthylene                      0.008941     0.025590
  Acenaphthene                        0.001136     0.001579
  Fluorene                            0.012595     0.008075
  Phenanthrene                        0.008017     0.008055
  [alpha]-Methylfluorene              0.002117     0.000878
  1-Methylfluorene                    0.002054     0.000583
  [beta]-Methylfluorene               0.000477     0.000206
  [alpha]-Methyl phenanthrene         0.002131     0.000709
  2-Methyl phenanthrene               0.002574     0.000856
  [gamma]-Methyl phenanthrene         0.001923     0.000862
  1-Methylphenanthrene                0.001590     0.000521
  3,6-Dimethylphenanthrene            0.000637     0.000145
  [alpha]-Dimethylphenanthrene        0.000979     0.000184
  [beta]-Dimethylphenanthrene         0.000632     0.000108
  [gamma]-Dimethylphenanthrene        0.001837     0.000448
  1,7-Dimethyl phenanthrene           0.000940     0.000268
  d-Dimethylphenanthrene              0.000567     0.000103
  [epsilon]-Dimethylphenanthrene      0.000803     0.000248
  Anthracene                          0.001107     0.001244
  9-Methylanthracene                  0.000129     0.000052
  Retene                              0.000032     0.000010
Tetracyclic or four-ring PAH
    organic compounds
  2,3-Benzofluorene                   0.000957     0.001241
  Fluoranthene                        0.002844     0.003514
  Pyrene                              0.002116     0.001901
  1-Methylfluorene +
    a-methylfluorene                  0.000008     0.000007
  b-Methylpyrene +
    b-methylfluorene                  0.000769     0.000654
  c-Methylpyrene +
    c-methylfluorene                  0.000462     0.000573
  4-Methylpyrene                      0.000227     0.000084
  1-Methylpyrene                      0.000196     0.000078
  Benzo[c]phenanthrene                0.000207     0.000216
  Benz[a]anthracene                   0.000275     0.000293
  7-Methylbenz[a]anthracene           0.000002     0.000003
  Chrysene                            0.000849     0.000516
  5+6-Methyl chrysene                 0.000059     0.000031
Five-ring PAH organic compounds
  Benzo[b+j+k]FL                      0.000449     0.000326
  7-Methylbenzo[a]pyrene              0.000007     0.000006
  Benzo[e]pyrene                      0.000225     0.000147
  Perylene                            0.000010     0.000062
  Benzo[a]pyrene                      0.000089     0.000225
Six-ring PAH organic compounds
  Indeno[123-cd]pyrene                0.000204     0.000204
  Benzo[ghi]perylene                  0.000276     0.000279
  Dibenz[ah+ac]anthracene             0.000032     0.000024
Seven-ring PAH organic compounds
  Coronene                            0.000078     0.000103
Oxygenated PAH organic compounds
  9-Fluorenone                        0.012351     0.020705
  Xanthone                            0.000008     0.000099
  Acenaphthenequinone                 0.000000     0.000000
  Perinaphthenone                     0.000000     0.000000
  Anthraquinone                       0.000712     0.000507
  9-Anthraldehyde                     0.000309     0.000056
  Benz[a]anthracene-7,12-dione        0.000035     0.000055
Sulfur-containing PAH
  Benzonaphthothiopene                0.000091     0.000012
Nitro PAH organic compounds
  1-Nitronaphthalene                  0.000029     0.000008
  2-Nitronaphthalene                  0.000016     0.000011
  2-Methyl-1-nitronaphthalene         0.000000     0.000001
  [alpha]-Methyl-1-
    nitronaphthalene                  0.000001     0.000001
  [beta]-Methyl-l-nitronaphthalene    0.000003     0.000003
  2-Nitrobiphenyl                     0.000000     0.000000
  4-Nitrobiphenyl                     0.000003     0.000002
  5-Nitroacenaphthene                 0.000000     0.000000
  9-Nitroanthracene                   0.000001     0.000002
  2-Nitrofluoranthene                 0.000000     0.000000
  3-Nitrofluoranthene                 0.000000     0.000000
  1-Nitropyrene                       0.000001     0.000000
  7-Nitrobenz[a]anthracene            0.000000     0.000000
  6-Nitrochrysene                     0.000006     0.000001
  6-Nitrobenzo[a]pyrene               0.000000     0.000000
Hopane/sterane organic compounds
  C27-20S-13[beta](H),17[alpha]
    (H)-diasterane                    0.000002     0.000002
  C27-20R-13[beta](H),17[alpha]
    (H)-diasterane                    0.000002     0.000001
  C27-20S-13[alpha](H),17[beta]
    (H)-diasterane                    0.000001     0.000000
  C27-20R-13[alpha](H),17[beta]
    (H)-diasterane                    0.000001     0.000001
  C28-20S-13[beta](H),17[alpha]
    (H)-diasterane                    0.000001     0.000001
  C27-20S-5[alpha](H),14[alpha]
    (H)-cholestane                    0.000001     0.000002
  C27-20R-5[alpha](H),14[beta]
    (H)-cholestane                    0.000002     0.000002
  C27-20S-5[alpha](H),14[beta]
    (H),17[beta](H)-cholestane        0.000001     0.000002
  C27-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-cholestane       0.000003     0.000004
  C28-20S-5[alpha](H),14[alpha]
    (H),17[alpha](H)-ergostane        0.000001     0.000001
  C28-20R-5[alpha](H),14[beta](H),
    17[beta](H)-ergostane             0.000001     0.000001
  C29-20R-13[alpha](H),17[beta]
    (H)-diasterane                    0.000002     0.000003
  C27-Tetracyclic terpane             0.000005     0.000004
  C28-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-ergostane        0.000001     0.000001
  C27-Tetracyclic terpane             0.000001     0.000001
  C28-Tetracyclic terpane             0.000004     0.000004
  C29-20S-5[alpha](H),14[alpha]
    (H),17[alpha](H)-stigmastane      0.000001     0.000002
  C28-Tetracyclic terpane             0.000001     0.000001
  C29-20R-5[alpha](H),14[beta](H),
    17[beta](H)-stigmastane           0.000001     0.000003
  C29-20S-5[alpha](H),14[beta](H),
    17[beta](H)-stigmastane           0.000001     0.000002
  18[alpha](H),21[beta](H)-22,29,
    30-trisnorhopane                  0.000000     0.000000
  17[alpha](H),18[alpha](H),
    21[beta](H)-25,28,
    30-trisnorhopane                  0.000000     0.000000
  C29-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-stigmastane      0.000001     0.000003
  17[alpha](H),21[beta](H)-22,29,
    30-trisnorhopane                  0.000012     0.000016
  17[alpha](H),18[alpha](H),
    21[beta](H)-28,30-bisnorhopane   0.0000001    0.0000002
  17[alpha](H),21[beta]
    (H)-30-norhopane                 0.0000073    0.0000095
  18[alpha](H),21[beta]
    (H)-30-norneohopane              0.0000006    0.0000003
  17[alpha](H),21[beta](H)-hopane    0.0000003    0.0000009
  17[beta](H),21[alpha](H)-hopane    0.0000002    0.0000007
  22S-17[alpha](H),21[beta]
    (H)-30-homohopane                0.0000027    0.0000046
  22R-17[alpha](H),21[beta]
    (H)-30-homohopane                0.0000018    0.0000035
  17[beta](H),21[beta](H)-hopane     0.0000004    0.0000010
  27S-17[alpha](H),21[beta](H)-30,
    31-bishomohopane                 0.0000011    0.0000025
  22R-17[alpha](H),21[beta](H)-30,
    31-bishomohopane                 0.0000009    0.0000014
  22S-17[alpha](H),21[beta](H)-30,
    31,32-trishomohopane             0.0000006    0.0000015
  22R-17[alpha](H),21[beta](H)-30,
   31,32-trishomohopane              0.0000004    0.0000010

                                         D       [D.sub.30]

Total PM and SVOC
  Particle mass                       0.717567     0.693145
  SVOC mass                           0.282433     0.306855
Inorganic ions
  Chloride                            0.000637     0.000000
  Nitrate                             0.000254     0.000585
  Sulfate                             0.174578     0.049407
  Ammonium                            0.003130     0.001317
  Sodium                              0.000185     0.000117
Carbon
  Particle organic carbon mass        0.141816     0.461659
  Elemental carbon                    0.348723     0.123590
  Total carbon                        0.466659     0.508301
Carbon splits
  O1TC                                0.056771     0.099821
  O2TC                                0.025543     0.031097
  O3TC                                0.029318     0.038484
  O4TC                                0.026178     0.031534
  OPTC                                0.004008     0.260722
  OPTC                                0.196258     0.217269
  E2TC                                0.155739     0.123341
  E3TC                                0.000068     0.000244
Transition metals
  Titanium                            0.000027     0.000033
  Vanadium                            0.000012     0.000000
  Chromium                            0.000585     0.000473
  Manganese                           0.000078     0.000108
  Iron mass                           0.011622     0.026206
  Cobalt                              0.000005     0.000022
  Nickel                              0.000262     0.000311
  Copper                              0.000076     0.000113
  Zinc                                0.000879     0.001239
  Yttrium                             0.000006     0.000011
  Zirconium                           0.000010     0.000021
  Molybdenum                          0.000000     0.000000
  Palladium                           0.000000     0.000007
  Silver                              0.000065     0.000000
  Cadmium                             0.000001     0.000000
  Lanthanum                           0.000022     0.000000
  Gold                                0.000020     0.000039
  Mercury                             0.000002     0.000000
Other metals
  Magnesium                           0.000146     0.000140
  Aluminum mass                       0.000522     0.001545
  Potassium                           0.000057     0.000027
  Calcium                             0.001708     0.002423
  Gallium                             0.000001     0.000006
  Rubidium                            0.000005     0.000004
  Strontium                           0.000005     0.000008
  Indium                              0.000027     0.000023
  Barium                              0.000249     0.000000
  Thallium                            0.000017     0.000013
  Lead                                0.000041     0.000036
  Uranium                             0.000005     0.000000
Metalloids
  Silicon mass                        0.003295     0.004616
  Arsenic                             0.000004     0.000000
  Tin                                 0.000024     0.000047
  Antimony                            0.000000     0.000036
Nonmetal elements
  Sulfur                              0.028206     0.018411
  Chlorine                            0.000000     0.000000
  Phosphorous                         0.000139     0.000545
  Selenium                            0.000010     0.000008
  Bromine                             0.000010     0.000000
Bicyclic or two-ring PAH Organic
    Compounds
  Naphthalene                         0.003792     0.011416
  2-Menaphthalene                     0.002079     0.003719
  1-Menaphthalene                     0.002054     0.003757
  2,6 + 2,7-Dimenaphthalene           0.001017     0.001218
  1,6 + 1,3+1,7-
    Dimethylnaphthalene               0.001726     0.002036
  2,3 + 1,4+1,5-Dimenaphthalene       0.000562     0.000709
  1,2-Dimethylnaphthalene             0.000248     0.000252
  1-Ethyl-2-methylnaphthalene         0.000375     0.000480
  Biphenyl                            0.000635     0.000976
  2-Methylbiphenyl                    0.000167     0.000178
  3-Methylbiphenyl                    0.000921     0.001338
  4-Methylbiphenyl                    0.000355     0.000613
  Bibenzyl                            0.000701     0.001061
  [alpha]-Trimethylnaphthalene        0.000666     0.001060
  1-Ethyl-2-methylnaphthalene         0.000881     0.001511
  [beta]-Trimethylnaphthalene         0.000699     0.001057
  [gamma]-Trimethylnaphthalene        0.000616     0.000953
  2-Ethyl-l-methylnaphthalene         0.000014     0.000024
  [epsilon]-Trimethylnaphthalene      0.000414     0.000658
  f-Trimethylnaphthalene              0.000425     0.000666
  2,3,5-Trimethylnaphthalene          0.000790     0.001268
  2,4,5-Trimethylnaphthalene          0.000092     0.000252
  j-Trimethyl naphtha lene            0.000202     0.000303
  1,4,5-Trimethylnaphthalene          0.000288     0.000222
  1,2,8-Trimethylnaphthalene          0.000127     0.000132
Tricyclic or three-ring PAH
    organic compounds
  Acenaphthylene                      0.000486     0.002132
  Acenaphthene                        0.000107     0.000242
  Fluorene                            0.000760     0.003204
  Phenanthrene                        0.000650     0.001958
  [alpha]-Methylfluorene              0.000291     0.000519
  1-Methylfluorene                    0.000312     0.000509
  [beta]-Methylfluorene               0.000082     0.000117
  [alpha]-Methyl phenanthrene         0.000260     0.000519
  2-Methyl phenanthrene               0.000351     0.000633
  [gamma]-Methyl phenanthrene         0.000196     0.000473
  1-Methylphenanthrene                0.000242     0.000383
  3,6-Dimethylphenanthrene            0.000085     0.000160
  [alpha]-Dimethylphenanthrene        0.000123     0.000246
  [beta]-Dimethylphenanthrene         0.000087     0.000162
  [gamma]-Dimethylphenanthrene        0.000227     0.000460
  1,7-Dimethyl phenanthrene           0.000103     0.000231
  d-Dimethylphenanthrene              0.000070     0.000145
  [epsilon]-Dimethylphenanthrene      0.000091     0.000188
  Anthracene                          0.000046     0.000258
  9-Methylanthracene                  0.000021     0.000029
  Retene                              0.000006     0.000008
Tetracyclic or four-ring PAH
    organic compounds
  2,3-Benzofluorene                   0.000013     0.000192
  Fluoranthene                        0.000097     0.000688
  Pyrene                              0.000045     0.000548
  1-Methylfluorene +
    a-methylfluorene                  0.000001     0.000000
  b-Methylpyrene +
    b-methylfluorene                  0.000031     0.000164
  c-Methylpyrene +
    c-methylfluorene                  0.000009     0.000094
  4-Methylpyrene                      0.000006     0.000058
  1-Methylpyrene                      0.000003     0.000050
  Benzo[c]phenanthrene                0.000006     0.000052
  Benz[a]anthracene                   0.000004     0.000067
  7-Methylbenz[a]anthracene           0.000000     0.000000
  Chrysene                            0.000022     0.000227
  5+6-Methyl chrysene                 0.000027     0.000015
Five-ring PAH organic compounds
  Benzo[b+j+k]FL                      0.000008     0.000122
  7-Methylbenzo[a]pyrene              0.000003     0.000002
  Benzo[e]pyrene                      0.000003     0.000060
  Perylene                            0.000001     0.000002
  Benzo[a]pyrene                      0.000028     0.000022
Six-ring PAH organic compounds
  Indeno[123-cd]pyrene                0.000002     0.000056
  Benzo[ghi]perylene                  0.000003     0.000074
  Dibenz[ah+ac]anthracene             0.000000     0.000009
Seven-ring PAH organic compounds
  Coronene                            0.000002     0.000020
Oxygenated PAH organic compounds
  9-Fluorenone                        0.000564     0.000399
  Xanthone                            0.000048     0.000002
  Acenaphthenequinone                 0.000016     0.000000
  Perinaphthenone                     0.000000     0.000000
  Anthraquinone                       0.000034     0.000140
  9-Anthraldehyde                     0.000112     0.000085
  Benz[a]anthracene-7,12-dione        0.000004     0.000009
Sulfur-containing PAH
  Benzonaphthothiopene                0.000005     0.000024
Nitro PAH organic compounds
  1-Nitronaphthalene                  0.000012     0.000013
  2-Nitronaphthalene                  0.000004     0.000005
  2-Methyl-1-nitronaphthalene         0.000008     0.000001
  [alpha]-Methyl-1-
    nitronaphthalene                  0.000001     0.000000
  [beta]-Methyl-l-nitronaphthalene    0.000005     0.000003
  2-Nitrobiphenyl                     0.000000     0.000000
  4-Nitrobiphenyl                     0.000003     0.000007
  5-Nitroacenaphthene                 0.000000     0.000000
  9-Nitroanthracene                   0.000002     0.000002
  2-Nitrofluoranthene                 0.000000     0.000000
  3-Nitrofluoranthene                 0.000000     0.000000
  1-Nitropyrene                       0.000013     0.000010
  7-Nitrobenz[a]anthracene            0.000000     0.000001
  6-Nitrochrysene                     0.000002     0.000003
  6-Nitrobenzo[a]pyrene               0.000001     0.000005
Hopane/sterane organic compounds
  C27-20S-13[beta](H),17[alpha]
    (H)-diasterane                    0.000007     0.000004
  C27-20R-13[beta](H),17[alpha]
    (H)-diasterane                    0.000006     0.000002
  C27-20S-13[alpha](H),17[beta]
    (H)-diasterane                    0.000002     0.000001
  C27-20R-13[alpha](H),17[beta]
    (H)-diasterane                    0.000003     0.000001
  C28-20S-13[beta](H),17[alpha]
    (H)-diasterane                    0.000002     0.000001
  C27-20S-5[alpha](H),14[alpha]
    (H)-cholestane                    0.000006     0.000003
  C27-20R-5[alpha](H),14[beta]
    (H)-cholestane                    0.000010     0.000005
  C27-20S-5[alpha](H),14[beta]
    (H),17[beta](H)-cholestane        0.000005     0.000003
  C27-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-cholestane       0.000007     0.000008
  C28-20S-5[alpha](H),14[alpha]
    (H),17[alpha](H)-ergostane        0.000003     0.000002
  C28-20R-5[alpha](H),14[beta](H),
    17[beta](H)-ergostane             0.000007     0.000003
  C29-20R-13[alpha](H),17[beta]
    (H)-diasterane                    0.000006     0.000005
  C27-Tetracyclic terpane             0.000014     0.000007
  C28-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-ergostane        0.000004     0.000002
  C27-Tetracyclic terpane             0.000004     0.000003
  C28-Tetracyclic terpane             0.000009     0.000005
  C29-20S-5[alpha](H),14[alpha]
    (H),17[alpha](H)-stigmastane      0.000007     0.000004
  C28-Tetracyclic terpane             0.000005     0.000003
  C29-20R-5[alpha](H),14[beta](H),
    17[beta](H)-stigmastane           0.000008     0.000006
  C29-20S-5[alpha](H),14[beta](H),
    17[beta](H)-stigmastane           0.000006     0.000003
  18[alpha](H),21[beta](H)-22,29,
    30-trisnorhopane                  0.000001     0.000001
  17[alpha](H),18[alpha](H),
    21[beta](H)-25,28,
    30-trisnorhopane                  0.000001     0.000001
  C29-20R-5[alpha](H),14[alpha]
    (H),17[alpha](H)-stigmastane      0.000007     0.000004
  17[alpha](H),21[beta](H)-22,29,
    30-trisnorhopane                  0.000056     0.000030
  17[alpha](H),18[alpha](H),
    21[beta](H)-28,30-bisnorhopane   0.0000008    0.0000004
  17[alpha](H),21[beta]
    (H)-30-norhopane                 0.0000412    0.0000196
  18[alpha](H),21[beta]
    (H)-30-norneohopane              0.0000030    0.0000031
  17[alpha](H),21[beta](H)-hopane    0.0000030    0.0000014
  17[beta](H),21[alpha](H)-hopane    0.0000023    0.0000014
  22S-17[alpha](H),21[beta]
    (H)-30-homohopane                0.0000187    0.0000088
  22R-17[alpha](H),21[beta]
    (H)-30-homohopane                0.0000129    0.0000067
  17[beta](H),21[beta](H)-hopane     0.0000043    0.0000019
  27S-17[alpha](H),21[beta](H)-30,
    31-bishomohopane                 0.0000094    0.0000045
  22R-17[alpha](H),21[beta](H)-30,
    31-bishomohopane                 0.0000070    0.0000035
  22S-17[alpha](H),21[beta](H)-30,
    31,32-trishomohopane             0.0000055    0.0000023
  22R-17[alpha](H),21[beta](H)-30,
   31,32-trishomohopane              0.0000036    0.0000016


Appendix 2. Evaluation and Validation of PLS Model

Methods for evaluation of statistical modeling results. The PLS model results were evaluated based on indices of goodness of fit ([R.sup.2]) and prediction capacity ([Q.sup.2]). The [R.sup.2] goodness of fit coefficient coefficient /co·ef·fi·cient/ (ko?ah-fish´int)
1. an expression of the change or effect produced by variation in certain factors, or of the ratio between two different quantities.

2.
 is analogous to the multiple regression Multiple regression

The estimated relationship between a dependent variable and more than one explanatory variable.
 correlation coefficient (squared Pearson product-moment correlation between observed and predicted Y-values). Although this index provides insight into the strength of the observed association between model-predicted and observed health outcomes, it is not necessarily a reliable measure of the predictive capacity of models. [Q.sup.2] is calculated for this purpose. Based on the cross-validation technique described by Wold (1978), [Q.sup.2] assesses the model's ability to predict health outcomes for each individual sample when that sample is not used in the PLS model. The [Q.sup.2] goodness of prediction parameter (1) Any value passed to a program by the user or by another program in order to customize the program for a particular purpose. A parameter may be anything; for example, a file name, a coordinate, a range of values, a money amount or a code of some kind.  is similar to [R.sup.2] in that it is based on the sums of squares of prediction errors. However, unlike the prediction errors used in calculating [R.sup.2], the prediction errors for [Q.sup.2] are independent of the prediction itself, rendering [Q.sup.2] a more reliable index of prediction performance.

Both [R.sup.2] and [Q.sup.2] values were calculated for model predictions on the original data matrix as well as for 20 random orderings of the Y (health outcomes) data matrix, while keeping the X-matrix (emissions sample composition) fixed. As the randomly reordered Y-matrix ([Y.sub.r]) changes, the correlation between the original Y-values and reordered Y-values, (i.e., corr[[Y.sub.1], [Y.sub.r]), decreases to smaller and smaller values. If there is an underlying systematic (nonrandom) relationship between the Y- and X-matrices, a PLS model constructed on the randomly reordered Y-values (i.e., [Y.sub.r]) would be expected to exhibit predictive power The predictive power of a scientific theory refers to its ability to generate testable predictions. Theories with strong predictive power are highly valued, because the predictions can often encourage the falsification of the theory.  that decreases (decreased [Q.sup.2]) as corr[[Y.sub.1], [Y.sub.r] decreases. If this does not occur, and the predictive capability of a model based on random pairings of the health outcome data with their emission sample predictors is as good as the predictive capability of the model based on the observed pairing of health outcome and emissions sample data, there is good evidence that the model is based on chance as opposed to systematic (nonrandom) associations between the health outcome and emission composition. Thus, the test of model plausibility plau·si·ble  
adj.
1. Seemingly or apparently valid, likely, or acceptable; credible: a plausible excuse.

2. Giving a deceptive impression of truth or reliability.

3.
 is based upon the examination of relationship between corr[[Y.sub.1], [Y.sub.r] and the [Q.sup.2] associated with reordered Y-values (i.e., [Q.sup.2][[Y.sub.r]]). If the model is capturing a systematic (nonrandom) relationship, the scatter plot See scatter diagram.  of corr([Y.sub.1], [Y.sub.r] versus [Q.sup.2][[Y.sub.r]] should exhibit a linear relationship, and the estimated intercept intercept

in mathematical terms the points at which a curve cuts the two axes of a graph.
 should be near zero. The [R.sup.2] value may be in the acceptable range even when the variation in the Y-matrix yields an unacceptable [Q.sup.2], indicating that data exhibit correlations by chance but there are no clear differences in the associations between specific predictor variables and the dependent variables. This illustrates the importance of using the [Q.sup.2] criterion with permutation testing of these models, which is not always conducted and reported in the literature.

The overriding (programming) overriding - Redefining in a child class a method or function member defined in a parent class.

Not to be confused with "overloading".
 difficulty in performing the present analysis was the large number of predictor (composition) variables and relatively smaller number of emission samples on which to examine health outcomes. Without some strategy to group (and reduce) the number of composition variables, the identification of systematic (nonrandom) relationships between the composition variables and health outcomes might prove impossible. The strategy for grouping predictor variables focused on composites (sums) of chemical classes or subclasses. This strategy allowed greater interpretive in·ter·pre·tive   also in·ter·pre·ta·tive
adj.
Relating to or marked by interpretation; explanatory.



in·terpre·tive·ly adv.
 ability because the importance of specific classes of components could be identified. Compounds were also grouped because the lower number of predictor variables improved the model performance ([R.sup.2], [Q.sup.2]). The problem with grouping compounds in a particular chemical class is that the assumption is made that the individual compounds within that group contribute equally to toxicity. If there are differences among the toxicity of individual components, combining them might mask the effects of the most important components. In addition, grouping compounds masks the differences in the concentrations of individual compounds among the group.

Validation of statistical model example. Each iteration One repetition of a sequence of instructions or events. For example, in a program loop, one iteration is once through the instructions in the loop. See iterative development.

(programming) iteration - Repetition of a sequence of instructions.
 of the PLS model was systematically validated as described herein. This began with evaluation of the performance parameters ([R.sup.2] and [Q.sup.2], with 1.0 being perfect correlation or goodness of fit or prediction, respectively) of the base model, and was followed by validation by response permutation to ensure that the overall model was robust and not due to chance (random associations). As described, the final model plausibility was based on the relationship between corr[[Y.sub.1], [Y.sub.r]] and the [Q.sup.2] associated with reordered response (in this study, response is toxicity) data. Here we give one example (Figure A2-1) of the result from the validation by response permutation for the PLS prediction of lavage lavage /la·vage/ (lah-vahzh´)
1. the irrigation or washing out of an organ, as of the stomach or bowel.

2. to wash out, or irrigate.


lav·age
n.
 protein. Twenty random variations (permutations) of the ordering of the compositional data were modeled by PLS, and the scatter plot of corr([Y.sub.1], [Y.sub.r]) versus [Q.sup.2][[Y.sub.r]] (Figure A2-1) had an intercept near zero, indicating that the base model associations were nonrandom. An important point that is illustrated by this scatter plot is that each of the reordered Y-matrix models showed acceptable [R.sup.2], even when there was poor [Q.sup.2]. This is important because models that rely on [R.sup.2] alone may show correlations between variables that are actually random associations, and this would not be detected without validation using the [Q.sup.2] criteria.

[FIGURE A2-1 OMITTED]

Each of the individual models and iterations of the groupings of the compositional variables was evaluated by this permutation of the Y-matrix. Only models where the slope of corr([Y.sub.1], [Y.sub.r]) versus [Q.sup.2][[Y.sub.r]] was near zero were accepted and used to show associations between compositional components and lung or mutagenicity responses.
Table 1. Summary description of engine samples,
chemical measurements, and toxicity measurements.

Exhaust samples (a)
  Gasoline
    G
    [G.sub.30]
    WG
    BG
  Diesel
    Diesel
    [D.sub.30]
    HD
Chemical measurements (by class) (b)
  Total particle and SVOC mass
  Inorganic ions
  Carbon (organic, elemental, thermal fractions)
  Transition metals
  Other metals
  Metalloids
  Nonmetal elements
  Bicyclic or two-ring PAH organic compounds
  Tricyclic or three-ring PAH organic compounds
  Tetracyclic or four-ring PAH organic compounds
  Five-ring PAH organic compounds
  Six-ring PAH organic compounds
  Seven-ring PAH organic compounds
  Oxygenated PAH organic compounds (including quinones)
  Sulfur-containing PAHs
  Nitro-PAH organic compounds
  Hopane/sterane organic compounds (unique to oil)
Toxicity measurements (c)
  Lung toxicity
    Inflammation potency estimates
    Lavage macrophages
    Lavage neutrophils
    Total lavage leukocytes
    Histopathologic inflammation
    Macrophage inflammatory protein-2
  Cytotoxicity potency estimates
    Lactate dehydrogenase
    Lavage protein
    Histopathologic tissue injury
  Parenchymal change potency estimates
    Histopathologic structural remodeling
  General toxicity potency estimates
    Total histopathology
    Lung weight as percentage of body weight
  Bacterial mutagenicity
    Mutagenicity potency estimates
    TA98 - S9
    TA98 + S9
    TA100 - S9
    TA100 + S9

(a) Described by Whitney (2000). (b) Described by Zielinska
et al. (2004). (c) Described by Seagrave et al. (2002).

Table 2. Chemical/physical variables (X-matrix) included in the final
PLS model for lung toxicity.

                                                        Name used for
Chemical/physical component                              loading plot

Particulate mass                                              PM
Semivolatile organic mass                                    SVOC
Nitrate                                                   N[O.sub.3]
Sulfate                                                   S[O.sub.4]
Ammonium                                                  N[H.sub.4]
Particle organic carbon mass                               Particle
                                                        organic carbon
Elemental carbon                                              EC
Totalcarbon                                                   TC
1st carbon thermal fraction                                  01TC
2nd carbon thermal fraction                                  02TC
3rd carbon thermal fraction                                  03TC
4th carbon thermal fraction                                  04TC
5th carbon thermal fraction                                  OPTC
6th carbon thermal fraction                                  E1TC
7th carbon thermal fraction                                  E2TC
8th carbon thermal fraction                                  E3TC
Transition metals                                         Trans. met
Alkali earth metals                                       Earth met
Metalloids                                                Metalloids
Nonmetal elements                                          Non-met
Group 3A metals                                           3A metals
Group 4A metals                                           4A metals
Total PAHs                                                Total PAH
SVOC PAHs                                                  SVOC PAH
PM PAHs                                                     PM PAH
Two-ring PAHs                                             2-ring PAH
Three-ring PAHs                                           3-ring PAH
Four-ring PAHs                                            4-ring PAH
Five-ring PAHs                                            5-ring PAH
> Five-ring PAHs                                         > 5-ring PAH
Nitro-PAHs                                                Nitro-PAH
Oxygenated PAHs                                            Oxy-PAH
C27-20S-13[beta](H),17[alpha](H)-diasterane                   S1
C27-20R-13[beta](H),17[alpha](H)-diasterane                   S2
C27-20S-13[alpha](H),17[beta](H)-diasterane                   S3
C27-20R-13[alpha](H),17[beta](H)-diasterane                   S4
C28-20S-13[beta](H),17[alpha](H)-diasterane                   S5
C27-20S-5[alpha](H),14[alpha](H)-cholestane                   S6
C27-20R-5[alpha](H),14[beta](H)-cholestane                    S7
C27-20S-5[alpha](H),14[beta](H),                              S8
  17[beta](H)-cholestane
C27-20R-5[alpha](H),14[alpha](H),                             S9
  17[alpha](H)-cholestane
C28-20S-5[alpha](H),14[alpha](H),                            S10
  17[alpha](H)-ergostane
C28-20R-5[alpha](H),14[beta](H),17[beta](H)-ergostane        S11
C29-20S-13[alpha](H),17[beta](H)-diasterane                  S12
C27-tetracyclic terpane                                      S13
C28-20R-5[alpha](H),14[alpha](H),                            S14
  17[alpha](H)-ergostane
C27-tetracyclic terpane II                                   S15
C28-tetracyclic terpane                                      S16
C29-20S-5[alpha](H),14[alpha](H),                            S17
  17[alpha](H)-stigmastane
C28-tetracyclic terpane II                                   S18
C29-20R-5[alpha](H),14[beta](H),                             S19
  17[beta](H)-stigmastane
C29-20S-5[alpha](H),14[beta](H),                             S20
  17[beta](H)-stigmastane
18[alpha](H),21[beta](H)-22,29,30-trisnorhopane               H1
17[alpha](H),18[alpha](H),                                    H2
  21[beta](H)-25,28,30-trisnorhopane
C29-20R-5[alpha](H),14[alpha](H),                             H3
  17[alpha](H)-stigmastane
17[alpha](H),21[beta](H)-22,29,30-trisnorhopane               H4
17[alpha](H),18[alpha](H),                                    H5
  21[beta](H)-28,30-bisnorhopane
17[alpha](H),21[beta](H)-30-norhopane                         H6
18[alpha](H),21[beta](H)-30-norneohopane                      H7
17[alpha](H),21[beta](H)-hopane                               H8
17[beta](H),21[alpha](H)-hopane                               H9
22S-17[alpha](H),21[beta](H)-30-homohopane                   H10
22R-17[alpha](H),21[beta](H)-30-homohopane                   H11
17[beta](H),21[beta](H)-hopane                               H12
22S-17[alpha](H),21[beta](H)-30,31-bishomohopane             H13
2211-17[alpha](H),21[beta](H)-30,31-bishomohopane            H14
22S-17[alpha](H),21[beta](H)-30,31,32-trishomohopane         H15
22R-17[alpha](H),21[beta](H)-30,31,32-trishomohopane         H16

Table 3. Chemical/physical variables (X-matrix)
used for final PLS model of mutagenicity.

Oxygenated PAH organic compounds
  9-Fluorenone
  Xanthone
  Acenaphthenequinone
  Perinaphthenone
  Anthraqumone
  9-Anthraldehyde
  Benz[a]anthracene-7,12-dione

Nitro-PAH organic compounds
  1-Nitronaphthalene
  2-Nitronaphthalene
  2-Methyl-1 -nitronaphthalene
  [alpha]-Methyli-1-tronaphthalene
  [beta]-Methyl-l-nitronaphthalene
  2-Nitrobipheny
  4-Nitrobiphenyl
  5-Nitroacenaphthene
  9-Nitroanthracene
  2-Nitrofluoranthene
  3-Nitrofluoranthene
  1-Nitropyrene
  7-Nitrobenz[a]anthracene
  6-Nitrochrysene
  6-Nitrobenzo[a]pyrene


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Received 21 January 2004; accepted 14 July 2004.

Address correspondence to J.D. McDonald, Lovelace Respiratory Research Institute, 2425 Ridgecrest Dr. SE, Albuquerque, NM 87108 USA. Telephone: (505) 348-9455. Fax: (505) 348-4980. E-mail: jmcdonal@lrri.org

E. Johanson and S. Rannar (Umetrics, Umea, Sweden) provided valuable discussions.

This work was supported by the Office of Freedom Car and Vehicle Technologies, U.S. Department of Energy, The views and opinions of the authors do not necessarily reflect those of the U.S. Government or any agency thereof.

The authors declare they have no competing financial interests.

Jacob D. McDonald, (1) Ingvar Eide, (2) JeanClare Seagrave, (1) Barbara Zielinska, (3) Kevin Whitney, (4) Douglas R. Lawson, (5) and Joe L. Mauderly (1)

(1) Lovelace Respiratory Research Institute, Albuquerque, New Mexico “Albuquerque” redirects here. For other uses, see Albuquerque (disambiguation).
Albuquerque (pronounced [ˈæl.bə.kɚ.kiː], Spanish: [al.βu.
, USA; (2) Statoil Research Centre, Trondheim, Norway; (3) Desert Research Institute, Reno, Nevada, USA; (4) Southwest Research Institute, San Antonio, Texas “San Antonio” redirects here. For other uses, see San Antonio (disambiguation).
San Antonio is the second most populous city in Texas, the third most populous metropolitan area in Texas, and is the seventh most populous city in the United States. As of the 2006 U.S.
, USA; (5) National Renewable Energy Laboratory, Golden, Colorado The City of Golden is a home rule municipality that is the county seat of Jefferson County, Colorado, United States. Golden lies along Clear Creek at the eastern edge of the foothills of the Front Range of the Rocky Mountains. , USA
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