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Rapid increase of genetically diverse methicillin-resistant Staphylococcus aureus, Copenhagen, Denmark.


In Copenhagen, methicillin-resistant Staphylococcus aureus methicillin-resistant Staphylococcus aureus Methicillin-aminoglycoside resistant Staphylococcus aureus, MRSA An organism with multiple antibiotic resistances–eg, aminoglycosides, chloramphenicol, clindamycin, erythromycin, rifampin, tetracycline,  (MRSA MRSA Methicillin-resistant Staphylococcus aureus. See MARSA. ) accounted for <15 isolates per year during 1980-2002. However, since 2003 an epidemic increase has been observed, with 33 MRSA cases in 2003 and 110 in 2004. We analyzed these 143 cases epidemiologically and characterized isolates by pulsed-field gel electrophoresis gel electrophoresis
n.
Electrophoresis performed in a gel composed of agarose, polyacrylamide, or starch.
, Staphylococcus staphylococcus (stăf'ələkŏk`əs), any of the pathogenic bacteria, parasitic to humans, that belong to the genus Staphylococcus. The spherical bacterial cells (cocci) typically occur in irregular clusters [Gr.  protein A (spa) typing, multilocus sequence typing Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci. The procedure characterizes isolates of bacterial species using the DNA sequences of internal fragments of multiple (usually seven) housekeeping genes. , staphylococcal staphylococcal

pertaining to Staphylococcus spp.


staphylococcal clumping test
used as a means of measuring the quantity of fibrinogen-split products in a sample of blood.
 chromosome cassette (SCC SCC - strongly connected component ) mec typing, and detection of Panton-Valentine leukocidin Panton-Valentine leukocidin

a nonhemolytic toxin produced by Staphylococcus aureus which kills segmented neutrophils and macrophages.
 (PVL PVL Periventricular Leukomalacia
PVL Prevail
PVL Parameter Value Language
PVL Pade Via Lanczos (circuit modeling)
PVL Physical Volume Library
PVL Pascack Valley Line (New Jersey Transit commuter rail line) 
) genes. Seventy-one percent of cases were communityonset MRSA (CO-MRSA); of these, 36% had no identified risk factors. We identified 29 spa types (t) and 16 sequence types (STs) belonging to 8 clonal complexes and 3 ST singletons. The most common clonal types were t024/ST8-IV, t019/ST30-IV, t044/ST80-IV, and t008/ST8-IV (USA300). A total of 86% of isolates harbored SCCmec IV, and 44% had PVL. Skin and soft tissue infections dominated. CO-MRSA with diverse genetic backgrounds is rapidly emerging in a low MRSA prevalence area.

**********

For many years, methicillin-resistant Staphylococcus au reus (MRSA) has been a serious and common nosocomini pathogen Pathogen

Any agent capable of causing disease. The term pathogen is usually restricted to living agents, which include viruses, rickettsia, bacteria, fungi, yeasts, protozoa, helminths, and certain insect larval stages.
 in hospitals outside the Nordic countries and the Netherlands (1). Community-onset MRSA (CO-MRSA) was first reported in Western Australia Western Australia, state (1991 pop. 1,409,965), 975,920 sq mi (2,527,633 sq km), Australia, comprising the entire western part of the continent. It is bounded on the N, W, and S by the Indian Ocean. Perth is the capital.  in the early 1990s (2) and has, especially during the past 5 years, emerged as a global problem (1,3). CO-MRSA in the United States United States, officially United States of America, republic (2005 est. pop. 295,734,000), 3,539,227 sq mi (9,166,598 sq km), North America. The United States is the world's third largest country in population and the fourth largest country in area.  has mostly been caused by the Panton-Valentine leukocidin (PVL)-positive clones USA400 (sequence type [ST]l) and more recently by USA300 (ST8) (1,4-7). In Europe the increase in CO-MRSA has mostly been attributed to the PVL-positive ST80 clone (3,8). In Denmark, since 1980, MRSA has accounted for <100 MRSA isolates per year nationwide (www.danmap.org/pdffiles/danmap_2005.pdf). At our laboratory, MRSA has been isolated from <15 patients per year until 2002. Approximately half of the MRSA cases found in Denmark during these years were imported, i.e., through patients transferred from foreign hospitals (9).

Since 2003 the number of MRSA-positive persons increased both nationally and in Copenhagen. Nationally, the number increased from 50-105 new cases per year to 243 in 2003, 549 in 2004, and 864 in 2005. At Hvidovre Hospital, we found MRSA in 5 persons in 2001, 14 in 2002, 33 in 2003, 110 in 2004, and 170 in 2005. We describe the epidemiology of the emergence of MRSA in Copenhagen in 2003 and 2004 and characterize the genetic background of the isolates.

Materials and Methods

Setting

The Department of Clinical Microbiology Clinical microbiology

The adaptation of microbiological techniques to the study of the etiological agents of infectious disease. Clinical microbiologists determine the nature of infectious disease and test the ability of various antibiotics to inhibit or kill
, Hvidovre Hospital, services 4 of the 5 hospitals in Copenhagen and receives all microbiology samples from general practice in the Copenhagen and Frederiksberg Municipality (population 597,000). The total number of swabs received in the laboratory decreased slightly from 60,245 in 2000 to 55,223 in 2004. The principles for MRSA treatment, isolation of all hospitalized MRSA patients and hospital and household screening, were not changed before or during the study period. The only change was the introduction of new molecular typing methods.

Patient Data

Upon identification of an MRSA isolate, the patient's attending physician was contacted to ensure correct anti-microbial chemotherapy and isolation procedures. The patient's physician was interviewed about the patient to define types of infections, identify risk factors, and establish epidemiologic links between patients. Most interviews were followed up by 1-5 more contacts. All interview data were registered prospectively in case-report forms and entered into the patient record files of our laboratory information system. The National Health Care Database (NHCD NHCD National HUMINT Collection Directive ) was used to check for hospital admissions and ambulatory healthcare visits in Danish hospitals within the previous 2 years. These data enabled us to identify whether MRSA patients had been hospitalized in the same ward during the same period. The patients' home addresses, household members, and their general practitioners were identified in the NHCD. The patients were divided into 4 groups of acquisition mode of MRSA (8): l) hospital-acquired (HA)-MRSA, MRSA isolated in a sample taken >48 h after admission or known exposure in a Danish hospital (domestic HA-MRSA) or a hospital abroad (imported HAMRSA); 2) community-onset MRSA healthcare-associated (CO-HCA), MRSA isolated in a sample taken <48 hours after hospital admission or in general practice, with hospitalization and/or outpatient treatment in the previous year, having close contact to a person with HA-MRSA, residing in a nursing home, receiving in-home help or home nursing, being on dialysis, having cancer or diabetes, or being a drug abuser drug abuser nchi fa uso di droghe ; 3) CO-MRSA community risk (CO-CR), MRSA isolated in a sample taken <48 hours after hospital admission or in general practice and having close contact to a person with CO-MRSA or having recently traveled to a country with high MRSA endemicity (no known contact with healthcare); and 4) CO-MRSA with no known risk factors (CO-NR), MRSA isolated in a sample taken <48 hours after hospital admission or in general practice, with no healthcare association, no known community risk, and no travel risk.

MRSA Isolates and Antimicrobial antimicrobial /an·ti·mi·cro·bi·al/ (-mi-kro´be-al)
1. killing microorganisms or suppressing their multiplication or growth.

2. an agent with such effects.
 Susceptibility Testing

S. aureus The aureus (pl. aurei) was a gold coin of ancient Rome valued at 25 silver denarii. The aureus was regularly issued from the 1st century BC to the beginning of the 4th century AD, when it was replaced by the solidus.  isolates were identified by positive Staphaurex (Remel Europe Ltd., Dartford, UK) result and a positive coagulase coagulase /co·ag·u·lase/ (-las) an antigenic substance of bacterial origin, produced by staphylococci, which may be causally related to thrombus formation.

co·ag·u·lase
n.
 test result. Only the first MRSA isolate from each patient was included in our study, for a total of 143 isolates in 2003 and 2004.

Susceptibility testing was performed on Isosensitest agar by the disk-diffusion method (antibiotic disks; Oxoid, Basingstoke, UK) according to according to
prep.
1. As stated or indicated by; on the authority of: according to historians.

2. In keeping with: according to instructions.

3.
 recommendations of the Swedish Reference Group for Antibiotics (www.srga. org). Isolates were screened for resistance to methicillin methicillin /meth·i·cil·lin/ (meth?i-sil´in) a semisynthetic penicillin highly resistant to inactivation by penicillinase; used as the sodium salt.

meth·i·cil·lin
n.
 by a cefoxitin 10-[micro]g disk (10). Isolates were further tested against penicillin, cefuroxime, erythromycin erythromycin (ĭrĭth'rōmī`sĭn), any of several related antibiotic drugs produced by bacteria of the genus Streptomyces (see antibiotic). , clindamycin, gentamicin gentamicin /gen·ta·mi·cin/ (jen?tah-mi´sin) an aminoglycoside antibiotic complex isolated from bacteria of the genus Micromonospora, , vancomycin vancomycin (văn'kōmī`sĭn), antibiotic resembling penicillin in the way it acts. It is derived from the bacterium Streptomyces orientalis, which was isolated from soil of India and Indonesia. , fucidic acid, rifampin rifampin (rĭfăm`pĭn), antibiotic used in the treatment of tuberculosis. It is also used to eliminate the meningococcus microorganism from carriers and to treat leprosy, or Hansen's disease. , tetracycline tetracycline (tĕ'trəsī`klēn), any of a group of antibiotics produced by bacteria of the genus Streptomyces. They are effective against a wide range of Gram positive and Gram negative bacteria, interfering with protein , and moxifloxacin. Inducible clindamycin resistance was examined by using the double-disk method (11). All MRSA isolates were confirmed mecA positive by PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
 (12). Multidrug-resistant MRSA was defined as an isolate resistant to [greater than or equal to] non--[beta]-lactam antimicrobial agents Antimicrobial agents

Chemical compounds biosynthetically or synthetically produced which either destroy or usefully suppress the growth or metabolism of a variety of microscopic or submicroscopic forms of life.
.

Typing Methods

SmaI macrorestriction profiles were performed according to the HARMONY protocol (13) and analyzed with Bionumerics version 4.5 software (Applied Maths, Kortrijk, Belgium). Concatamerized phage phage: see bacteriophage.

phage - A program that modifies other programs or databases in unauthorised ways; especially one that propagates a virus or Trojan horse. See also worm, mockingbird. The analogy, of course, is with phage viruses in biology.
 [lambda] DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 (New England Biolabs New England Biolabs (NEB) produces and supplies reagents for the life science industry. NEB offers a large selection of recombinant and native enzymes for genomic research. It also offers products in the areas related to proteomics and drug discovery. , Ipswich, MA, USA) was loaded in every sixth lane as a molecular weight standard to normalize normalize

to convert a set of data by, for example, converting them to logarithms or reciprocals so that their previous non-normal distribution is converted to a normal one.
 the individual gels, and SmaI-digested S. aureus NCTC NCTC National Conservation Training Center
NCTC National Counterterrorism Center (9/11 Commission Report)
NCTC National Cable Television Cooperative
NCTC National Collection of Type Cultures (UK laboratory) 
 8325 was used to normalize the gels to each other. Only DNA fragments in the range of the X ladder (50-1,000 kb) were included in the analysis. Pulsed-field gel electrophoresis (PFGE PFGE Pulsed-Field Gel Electrophoresis ) clusters were identified on an UPGMA UPGMA Unweighted Pair Group Method, Arithmetic Mean  (unweighted pair-group method with arithmetic mean (mathematics) arithmetic mean - The mean of a list of N numbers calculated by dividing their sum by N. The arithmetic mean is appropriate for sets of numbers that are added together or that form an arithmetic series. ) dendrogram A dendrogram is a tree diagram frequently used to illustrate the arrangement of the clusters produced by a clustering algorithm (see cluster analysis). Dendrograms are often used in computational biology to illustrate the clustering of genes.  based on Dice coefficients, where optimization and band position tolerance Position Tolerance is a Geometric Dimensioning and Tolerancing (GD&T) location control used on engineering drawings to specify desired location as well as allowed non-conformitied to the position of a feature on a part.  were set at 1% and 2%, respectively. A similarity coefficient of 80% was selected to define the clusters. Reference strains used for PFGE were USA100-1100 (Centers for Disease Control and Prevention Centers for Disease Control and Prevention (CDC), agency of the U.S. Public Health Service since 1973, with headquarters in Atlanta; it was established in 1946 as the Communicable Disease Center. , Atlanta, GA, USA) and UK-MRSA 1, 3, 15, and 16 (HARMONY collection).

Sequencing of the staphylococcal protein A gene (spa typing) and multilocus sequence typing (MLST MLST Multi Locus Sequence Typing
MLST Medical Logistics Support Team
MLST Mini Losi Super Truck (1/18th scale radio control vehicle) 
) were performed as previously described (14,15), except that PCR products were enzymatically purified with exonuclease exonuclease /exo·nu·cle·ase/ (ek?so-noo´kle-as) any nuclease specifically catalyzing the hydrolysis of terminal bonds of deoxyribonucleotide or ribonucleotide chains, releasing mononucleotides.  I (New England Biolabs) and shrimp alkaline phosphatase alkaline phosphatase /al·ka·line phos·pha·tase/ (ALP) (fos´fah-tas) an enzyme that catalyzes the cleavage of orthophosphate from orthophosphoric monoesters under alkaline conditions.  (Amersham Biosciences, Piscataway, NJ, USA) before spa sequencing. Sequence reactions were performed on both DNA strands and analyzed on an ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother.


(Application Binary Interface) A specification for a specific hardware platform combined with the operating system.
 Prism 3100 (Applied Biosystems Applied Biosystems, Inc. (formerly NASDAQ: ABIO) is the original name of a pioneer biotechnology company founded in 1981 in Foster City, California, among the Silicon Valley cities of the southern San Francisco Bay Area. , Foster City, CA, USA). For PCR and sequencing of the spa gene, primers 1113F and 1496R were used. Designation of spa type was conducted by using the Ridom Staph staph
n.
Staphylococcus.



staph adj.
 Type program (www.ridom.de) (16). MLST was performed on 57 (40%) of the 143 isolates, representing all spa types, and on every fifth randomly chosen isolate if the spa type was t024, t019, t044, or t008. STs and clonal complexes (CCs) were assigned through the MLST database (www.mlst.net).

Staphylococcal chromosome cassette (SCC) mec types were determined by an in-house multiplex See multiplexing.  PCR strategy in which types I-V I-V Current/Voltage  were identified (17). Presence of PVL determinants was detected by PCR by using primers that overlap with previously published primer sequences (18,19). Primer sequences were forward 5'-TAG-GTAAAA-TGT-CTG-GAC-ATG-3' and reverse 5'-GCA-TCA-AST-GTA-TTG-GAT-AGC-3'.

Results

Patient and Infection Characteristics

In 2003 and 2004, 33 and 110 new cases of MRSA, respectively, were found. In 126 cases (88%) MRSA was from infection, and in 17 cases (12%) MRSA was found through screening of close family or hospital contacts to known MRSA patients.

Of the 143 MRSA cases, 42 (29%) were HA; 5 (3%) were imported, and 101 (71%) were CO. In 36 of the 101 CO-MRSA cases, the patient had a healthcare risk (COHCA), primarily due to hospitalization during the past year (21 cases) or residency in a nursing home (14 cases). Seven of the 36 patients were identified during the first 48 hours of hospitalization. For 30 patients a community risk (COCR COCR Central Ohio Competition Riders
COCR Common Outage Capacity Region
) was identified, and for 35, no risk factors (CO-NR) were identified.

MRSA was found in samples from 50 patients during their hospitalization. Seventeen of these patients were in single-bed rooms; for those in shared rooms, we had no data on possible roommates for 5 case-patients, and the roommates of 3 case-patients were not screened. For 21 case-patients, MRSA screening of roommates was performed. Screening showed 4 MRSA-positive roommates with MRSA strains of the same spa type as that of the index patient (3 t024, 1 t015). In 1 intensive care unit case, transmission presumably pre·sum·a·ble  
adj.
That can be presumed or taken for granted; reasonable as a supposition: presumable causes of the disaster.
 occurred from staff to a patient in an adjoining room, as the spa type found (t003) was unique among our isolates.

Transmission among the 93 patients that were not hospitalized was more common. Of these, 11 resided in nursing homes; 5 were in the same nursing home. Another 14 patients lived alone. For 15 patients it was not possible retrospectively to determine whether anyone had lived with the patient (in most cases the index patient had died). In the households of 11 index patients, another 13 persons were found to be MRSA positive. The spa type most often found in family members was t019/ST30. In 11 families, all household members were MRSA negative. Household screening was not performed for 18 families.

Most of our MRSA cases were in the Amager region of Copenhagen. The 2-year incidence of CO-MRSA (HCA HCA,
n.pr See acid, hydroxycitric.
 included) in Amager was 40:100,000 compared with 12:100,000 in the rest of Copenhagen. Skin and soft tissue infections dominated (91 [64%] of 143 cases), followed by 17 urinary tract infections urinary tract infection (UTI),
n infection in one or more of the structures that make up the urinary system. Occurs more often in women and is most commonly caused by bacteria.
 (UTIs, 12%), 9 deep-seated abscesses (6%), 5 lower respiratory tract infections While often used as a synonym for pneumonia, the rubric of lower respiratory tract infection can also be applied to other types of infection including lung abscess, acute bronchitis, and emphysema.  (LRTIs, 3%), and 4 cases of septicemia septicemia (sĕptĭsē`mēə), invasion of the bloodstream by virulent bacteria that multiply and discharge their toxic products. The disorder, which is serious and sometimes fatal, is commonly known as blood poisoning.  (3%) (Table 1; Figure). Patients with HA-MRSA and CO-HCA MRSA had similar median ages: 78 (range 28-94 years) and 82 years (6-95 years), respectively. The patients with CO-NR MRSA and CO-CR MRSA had median ages of 32 (range 0-90 years) and 27 years (1-74 years), respectively (Table 1). The HA-MRSA and CO-HCA MRSA patients as well as the CO-NR MRSA and CO-CR MRSA patients were in many aspects similar and will be described as 1 group each.

[FIGURE OMITTED]

Susceptibility Testing of Isolates

Resistance to macrolides was detected in 85 (59%) of 143 isolates and in all isolates of spa type t024 and 7 of 12 t008 isolates. Constitutive constitutive /con·sti·tu·tive/ (kon-stich´u-tiv) produced constantly or in fixed amounts, regardless of environmental conditions or demand.  macrolide resistance was found in 48% of erythromycin-resistant isolates. The resistance profiles of the 11 multiresistant isolates are described in the online Appendix Table (available from www.cdc.gov/EID/ content/13/10/1533-appT.htm) (3, 8).

HA and CO-HCA MRSA

Of 11 multidrug-resistant MRSA, 8 belonged to this group. Resistance to [beta]-lactams only was found in 6 CO-HCA MRSA isolates (6 [8%] of 78) that belonged to 5 different CCs and contained either SCCmec IV or V.

CO-NR MRSA and CO-CR MRSA

Of 11 multidrug-resistant MRSA, 3 were in this group and 2 patients had no identified risk factors (t002/CC5 and t044/ST80). Of 65 isolates, 23 (35%) were resistant only to [beta]-lactams, and all contained SCCmec IV. More data on resistance can be seen in the online Appendix Table.

PFGE, spa Typing, and MLST

There was a strong overall match between the clustering based on PFGE dendrogram, spa type, ST, or CC of the analyzed isolates (Table 2; online Appendix Figure, available from www.cdc.gov/EID/content/13/10/1533-appG. htm). The sequence-based typing methods showed 16 STs and 29 spa types (Table 2). MRSA isolates belonged to 8 CCs; CC8 was the most frequent (Table 2). The most common ST was ST8, represented by 72 isolates. The dominant spa type was t024/ST8, which accounted for 56 (39%) of 143 isolates. Other common MRSA were spa type t019/ ST30 (17 isolates), spa type t044/ST80 (16 isolates), and spa type t008/ST8 (12 isolates). The 5 imported MRSA belonged to CC5 (2 isolates), CC 8 (t037/ST239-III), CC 22, and ST111. One CC1 strain was placed far from the other 2 CC1 isolates. The first isolate was ST748, t127, PVL negative, and SCCmec V; the other 2 were ST1, t175, PVL positive, and SCCmec IV (USA400-1ike). PFGE could not discriminate between MRSA t008, PVL-positive isolates, and t024 PVL-negative isolates but intermingled these isolates.

HA and CO-HCA MRSA

The 78 isolates (42 HA and 36 CO-HCA MRSA) represented 20 different spa types and 1 nontypeable isolate. A total of 48 (86%) of the 56 spa t024 were in this group. The patients were predominately elderly persons living in nursing homes or receiving home-care nursing. Most isolates belonged to CC8 (72%) (Table 2). Thirty-seven of the HA-MRSA isolates were considered Danish nosocomial nosocomial /noso·co·mi·al/ (nos?o-ko´me-il) pertaining to or originating in a hospital.

nos·o·co·mi·al
adj.
1. Of or relating to a hospital.

2.
 isolates (domestic HA-MRSA), and 5 were from patients transferred from foreign hospitals (imported HA-MRSA).

CO-NR MRSA and CO-CR MRSA

The 65 isolates (35 CO-NR-MRSA and 30 CO-CR MRSA) represented 12 different spa types. All of the 17 t019/ST30, 15 of the 16 t044/ST80, and 10 of 12 of the t008/ST8 were found in this group. Only 8 patients with t024 were considered to have MRSA of CO-NR or CO-CR origin. Twenty-four cases were associated with household outbreaks, and transmission was suspected between children in 2 kindergarten classes.

Distribution of SCCmec Types and Prevalence of PVL Genes

SCCmec Type

SCCmec types could be determined for 140 (98%) of 143 isolates. SCCmec type IV was found in 122 (86%) of the isolates. Eighty-one percent of the HA and CO-HCA MRSA and 91% of the CO-NR/CO-CR isolates harbored SCCmec IV. The remaining isolates were represented by 5 type I (3.5%), 5 type II (3.5%), 2 type III Type III may stand for:
  • Glycogen storage disease type III, a genetic disorder
  • Hyperlipproteinemia type III, a risk factor for cardiovascular disease
  • The IBM Type-III Library, a distribution mechanism for unsupported IBM mainframe software such as CP/CMS
 (1.5%), 6 type V (4%), and 3 nontypeable (NT) (2%). Five CCs contained >1 SCCmec type: CC1 had IV and V; CC5 had I, II and IV; CC8 had llI, IV, and NT; CC22 had IV and NT; and CC 45 had IV and V (Table 2).

PVL

Sixty-three (44%) MRSA isolates carried the PVL genes. Twenty-nine (97%) of 30 abscesses were caused by PVL-positive MRSA. PVL-positive isolates were also seen in 19 patients with chronic wounds, 8 MRSA carriers, 4 patients with UTI UTI urinary tract infection.

UTI
abbr.
urinary tract infection



UTI

urinary tract infection.

UTI Urinary tract infection, see there
, 1 patient with LRTI LRTI Lower respiratory tract infection , 1 with ear infection, and 1 with pus pus, thick white or yellowish fluid that forms in areas of infection such as wounds and abscesses. It is constituted of decomposed body tissue, bacteria (or other micro-organisms that cause the infection), and certain white blood cells.  from a gallbladder, spa types and PVL were clearly correlated: all t019/ST30, t044/ST80, t008/ ST8, t002/ST5, and t003/ST5 were positive for the PVL genes. The remaining PVL-positive isolates were found in the following spa types: t175 (2/2), t355 (1/1), t359 (1/1), t376 (2/2), and t455 (1/1). None of the 56 spa t024 carried the PVL genes (Table 2).

HA and CO-HCA MRSA

Ten (13%) of the 78 isolates were PVL-positive. Three of them were part of a hospital outbreak with spa t003 imported in a patient from Germany.

CO-NR MRSA and CO-CR MRSA

Fifty-three (82%) PVL-positive isolates were found in the 65 strains in this group, 28 from patients with CO-NR MRSA and 25 from patients with CO-CR MRSA. PVL was present in 82% of CO-NR and CO-CR isolates, the isolates that we regard as truly community-acquired MRSA isolates.

Discussion

The high degree of genetic diversity (in both MLST background and SCCmec cassettes) found among MRSA isolates from a low-prevalence area is of global public health concern. The number of MRSA isolates doubled in <1 year in our area. Had the spread continued unhindered unhindered
Adjective

not prevented or obstructed: unhindered access

Adverb

without being prevented or obstructed: he was able to go about his work unhindered 
, MRSA would very rapidly have become a major source of illness as well as a healthcare financial concern for our hospitals and in the community. Although national guidelines to prevent MRSA transmission were first established in November 2006, an intervention program was introduced in Copenhagen in September 2005. We believe that our intervention program has had some effect: the number of cases in 2005 (170) increased to only 189 in 2006. While the current increase in CO-MRSA in the United States is predominantly by only 1 clone, USA300, we found 29 different spa types and 16 different STs in an area of<50 square miles. This finding suggests that the diversity has been caused not only by the spread of clones but also by the dissemination of the more mobile SCCmec elements IV and, to a lesser degree, V into methicillin-sensitive S. aureus (MSSA MSSA Methicillin-Sensitive Staphylococcus Aureus
MSSA Microscopy Society of Southern Africa
MSSA Maryland Saltwater Sportfishermen's Association
MSSA Military Selective Service Act
MSSA Mid-South Sociological Association
MSSA Minnesota Social Service Association
) (22). Typing MRSA with different methods gave additional information. The use of spa typing and PVL allowed the differentiation of MLST and PFGE identical isolates, and SCCmec typing could explain why MLST identical isolates had different PFGE patterns.

Our dominant clone, spa t024/ST8-IV, accounted for 39% of all isolates. The MRSA spa t024 clone is new in Denmark (8) and has been only sporadically reported, as MRSA or MSSA, to the SeqNet spa database (www. spaserver.ridom.de). The t024 clone was PVL negative but carried SCCmec IV, as did the typical PVL-positive community clones tO44/ST80, t019/ST30, and t008/ST8. t024 belongs to CC8, as did the archaic clone that caused hospital outbreaks in Denmark in the late 1960s and early 1970s (23). The PFGE pattern of t024 is almost identical to that of t008 (USA300) but can be differentiated by being PVL negative and having a spa type that has lost 24 consecutive bases (1 repeat). The PVL phenotype phenotype (fē`nətīp'): see genetics.
phenotype

All the observable characteristics of an organism, such as shape, size, colour, and behaviour, that result from the interaction of its genotype (total genetic makeup) with
 of t024 CC8 strains was more like HA-MRSA around the globe. t024 was predominantly associated with nursing home outbreaks and home care nursing in the same area of Copenhagen as the nursing homes. Hospitalization of these patients led to small MRSA outbreaks. Our infection control team trained staff in the affected nursing homes in infection control. Isolation procedures in nursing homes were modified, compared with hospital regimes, to respect the fact that the patients were living in their own home. The nursing home staff were predominantly social workers with rudimentary infection control education. This, combined with the fact that many patients were not eligible for eradication treatment because of chronic wounds, could explain some of the difficulties in limiting the spread in nursing homes.

On the basis of spa typing, we have seen some evolution of the t024 clone, spa type t430 has evolved from t024 by the loss of 24 consecutive bases. The 2 patients with t430 were identified late in the t024 outbreak, and we find it more likely that a deletion occurred in t024 rather than that a new MRSA clone was introduced or that the SCCmec was transmitted to MSSA. In support of this view, samples from 1 patient taken the same day had t024 (axilla axilla /ax·il·la/ (ak-sil´ah) pl. axil´lae   [L.] the armpit.ax´illary

ax·il·la
n. pl. ax·il·lae
See armpit.
 sample) and t430 (nose sample) (data not shown).

Some of the internationally well-known CO-MRSA clones were among our isolates (3,24). Most of the t008/ ST8-IV could be identified as MRSA USA300-0114 genotype genotype (jēn`ətīp'): see genetics.
genotype

Genetic makeup of an organism. The genotype determines the hereditary potentials and limitations of an individual.
 on the basis of PFGE typing (data not shown) (25). This finding is very troublesome because USA300 has evolved as the most rapidly spreading CO-MRSA in the United States and has become a dominant HA-MRSA in some hospitals (24). Special attention must be taken to control the spread of this clone. Sixteen (11%) isolates were t044/ST80-IV, which is a common CO-MRSA in Europe (3,26). This was a much more prevalent CO-MRSA clone in a national study of 81 Danish MRSA isolates from 2001, where 44% belonged to ST80-IV (8). We found that t019/ ST30-IV was the most common CO-MRSA (17 patients, 12%). The t019/ST30-IV clone is known as the Southwest Pacific clone, and many of our cases had a geographic link to the Far East (data not shown), t019 was PVL positive, generally susceptible to all non-[beta]-lactams, and caused severe abscesses. The PVL-positive MRSA clones were almost never associated with hospital outbreaks probably because these patients with skin and soft tissue infections were rapidly discharged.

Our findings of high prevalence of PVL-positive isolates (44%) are not surprising and are consistent with data from other studies (2 7-29) in which PVL is associated with skin and soft tissue infections, commonly described in COMRSA. Eighty-two percent of the CO-NR/CO-CR isolates contained the PVL genes, compared with only 13% of the HA/CO-HCA MRSA. We observed an age difference with a median age of 32 years (0-90 years) in the NR/CR group compared with 82 years (6-95 years) in the HCA group. These findings might indicate that the first group consists of patients with true community-onset MRSA and the second group is closely related to our HA-MRSA. Current definitions are becoming of decreasing usefulness as typical CO-MRSA strains invade hospitals.

A possible explanation for the increase in CO-MRSA could be a rise in outpatient antimicrobial drug use. Compared with other European countries (average 20 defined daily doses Defined daily doses (DDDs) are a WHO statistical measure of drug consumption. DDDs are used to standardise the comparative usage of various drugs between themselves or between different healthcare environments.  [DDD DDD Direct Distance Dialing
DDD Digital/Digital/Digital (audio CD format, recording/mixing/mastering)
DDD Degenerative Disc Disease
DDD Domain Driven Design
DDD Data Display Debugger (GNU Project) 
]/1,000 inhabitants/day) and the United States (26 DDD/1,000 inhabitants/day), Denmark had a low level of antimicrobial drug use in 2004 (14 DDD/1,000 inhabitants/day) (30). Although the use of systemic anti-microbial agents in Denmark has increased 14.7% from 2000 through 2004 (www.dfvf.dk/files/filer/zoonosecentret/publikationer/danmap/danmap_2004.pdf), it is unlikely that this is the only reason for the rise in MRSA.

Although we found a high number of CO-MRSA, our assessment of risk factors has some limitations. Having the data of all hospital admissions and outpatient hospital visits from the NHCD makes the division into the categories of HA-MRSA and CO-MRSA almost certain. However, because most of the patients were not directly interviewed about risk factors, some data might have been missed. Therefore, some of the CO-NR MRSA might actually be CO-CR or CO-HCA MRSA.

Previous guidelines used in Denmark for controlling MRSA in the hospitals by screening patients transferred from hospitals abroad are not sufficient to address today's CO-MRSA problems. In November 2006, the Danish National Health Board published national guidelines for preventing MRSA spread (www.sst.dk/publ/publ2006/cff/ mrsa/vejl_mrsa.pdf). These guidelines introduce new approaches to limit the spread of MRSA in hospitals and in the community, where isolation of patients is not an option. In some hospitals we now have introduced admittance Admittance

The ratio of the current to the voltage in an alternating-current circuit. In terms of complex current I and voltage V, the admittance of a circuit is given by Eq. (1), and is related to the impedance of the circuit Z by Eq. (2).
 MRSA screening of all patients who have wounds or urinary catheters and we are isolating all residents from MRSA-endemic nursing homes. The hospital infection control teams see all patients with MRSA. In the community we have improved the screening of close contacts of MRSA patients and initiated a task force that visits patients at home and plans the eradication of MRSA carriage for all persons in the household. Our initial regime is 5 days' treatment with 4% chlorhexidine chlorhexidine /chlor·hex·i·dine/ (klor-heks´i-den) an antibacterial effective against a wide variety of gram-negative and gram-positive organisms; used also as the acetate ester, as a preservative for eyedrops, and as the gluconate or  body wash once a day and 2% mupirocin nasal ointment ointment /oint·ment/ (oint´ment) a semisolid preparation for external application to the skin or mucous membranes, usually containing a medicinal substance.

oint·ment
n.
 3x each day combined with washing of towels and bed linen and improved housekeeping. For some patients the treatment needs to be repeated (31), and patients with MRSA carriage that is difficult to eradicate are sometimes treated with systemic antimicrobial agents (32). Unfortunately, not all patients are decolonized by this procedure, and the long-term effect of eradication treatment, including the possible development of resistance to the antimicrobial agents used, is not well documented (33). Long-term studies on new and more effective methods to eradicate MRSA carriage are needed.

The rapid increase and genetic diversity of CO-MRSA in a country with low prevalence of HA-MRSA are of great concern, as these CO-MRSA are sporadically appearing in our hospitals. Especially worrisome is the discovery that MRSA USA300 genotype is in our community, as this MRSA has recently shown its epidemic potential in both the US community and US hospitals (24). MRSA isolation rates are increasing in other Nordic countries (34,35), but we need more data on CO-MRSA from countries in which classic HA-MRSA dominate. The current search-and-destroy policies need to be updated, refined, and intensified if Denmark hopes to remain a country with low MRSA prevalence.

Acknowledgments

We thank Susanne M. Rohde for her technical assistance. Dr Bartels is a PhD student working with MRSA. She plans to specialize in clinical microbiology.

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(13.) Murchan S, Kaufmann ME, Deplano A, de Ryek R, Struelens M, Ziun CE, et al. Harmonization har·mo·nize  
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v.tr.
1. To bring or come into agreement or harmony. See Synonyms at agree.

2. Music To provide harmony for (a melody).
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(14.) Enright MC, Day NP, Davies CE, Peacock SJ, Spratt BG. Multilocus sequence typing for characterization of methicillin-resistant and methicillin-susceptible clones of Staphylococcus aureus. J Clin Microbiol. 2000;38:1008-15.

(15.) Shopsin B, Gomez M, Montgomery SO, Smith DH, Waddington M, Dodge DE, et al. Evaluation of protein A gene polymorphic polymorphic - polymorphism  region DNA sequencing DNA sequencing

The determination of the sequence of nucleotides in a sample of DNA.
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(16.) Harmsen D, Claus H, Witte W, Rothganger J, Claus H, Turnwald D, et al. Typing of methicillin-resistant Staphylococcus aureus in a university hospital setting by using novel software for spa repeat determination and database management. J Clin Microbiol. 2003;41:5442-8.

(17.) Boye Boye may refer to:
  • Anker Boye (born 1950), Danish politician
  • Jan Boye (born 1962), Danish politician
  • Karin Boye (1900-1941), Swedish poet and novelist
  • Mame Madior Boye (born 1940), former Prime Minister of Senegal
 K, Bartels MD, Andersen IS, Moiler JA, Westh H. A new multiplex PCR for easy screening of methicillin-resistant Staphylococcus aureus SCCmec types I-V. Clin Microbiol Infect. 2007;13: 725-7.

(18.) Johnsson D, Moiling P, Stralin K, Soderquist B. Detection of Panton-Valentine leukocidin gene in Staphylococcus aureus by LightCycler PCR: clinical and epidemiological aspects. Clin Microbiol Infect. 2004;10:884-9.

(19.) Lina G, Piemont Y, Godail-Gamot F, Bes M, Peter MO, Gauduchon V, et al. Involvement of Panton-Valentine leukocidin-producing Staphylococcus aureus in primary skin infections and pneumonia. Clin Infect Dis. 1999;29:1128-32.

(20.) Aires de Sousa M, Bartzavali C, Spiliopoulou 1, Sanches IS, Crisostomo MI, de Lencastre H. Two international methicillin-resistant Staphylococcus aureus clones endemic in a university hospital in Patras, Greece. J Clin Microbiol. 2003;41:2027-32.

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(22.) Robinson DA, Enright MC. Evolutionary models of the emergence of methicillin-resistant Staphylococcus aureus. Antimicrob Agents Chemother. 2003;47:3926-34.

(23.) Crisostomo MI, Westh H, Tomasz A, Chung M, Oliveira DC, de Lencastre H. The evolution of methicillin resistance in Staphylococcus aureus: similarity of genetic backgrounds in historically early methicillin-susceptible and -resistant isolates and contemporary epidemic clones. Proc Natl Acad Sci U S A. 2001 ;98:9865-70.

(24.) Seybold U, Kourbatova EV, Johnson JG, Halvosa SJ, Wang YF, King MD, et al. Emergence of community-associated methicillin-resistant Staphylococcus aureus USA300 genotype as a major cause of health care-associated blood stream infections. Clin Infect Dis. 2006;42:647-56.

(25.) Larsen A, Stegger M, Goering R, Sorum M, Skov R. Emergence and dissemination of the methicillin resistant Staphylococcus aureus USA300 clone in Denmark (2000-2005). Euro Surveill. 2007;12. PMID PMID PubMed-Indexed for MEDLINE
PMID Portable Multispectral Imaging Device
PMID Process Management Improvement & Deployment
PMID Physical Media Id
PMID Performance Metric Identifier
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(26.) Holmes A, Ganner M, McGuane S, Pitt TL, Cookson BD, Kearns AM. Staphylococcus aureus isolates carrying Panton-Valentine leucocidin genes in England and Wales England and Wales are both constituent countries of the United Kingdom, that together share a single legal system: English law. Legislatively, England and Wales are treated as a single unit (see State (law)) for the conflict of laws. : frequency, characterization, and association with clinical disease. J Clin Microbiol. 2005;43: 2384-90.

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(28.) Dufour P, Gillet Y, Bes M, Lina G, Vandenesch F, Floret D, et al. Community-acquired methicillin-resistant Staphylococcus aureus infections in France: emergence of a single clone that produces Panton-Valentine leukocidin. Clin Infect Dis. 2002;35:819 24.

(29.) Wanner WJ, Spalburg E, Heck ME, Pluister GN, Tiemersma E, Willems RJ, et al. Emergence of virulent methicillin-resistant Staphylococcus aureus strains carrying Panton-Valentine leucocidin genes in The Netherlands. J Clin Microbiol. 2005;43:3341-5.

(30.) Goossens H, Fereeh M, Coenen S, Stephens R Comparison of outpatient systemic antibacterial antibacterial /an·ti·bac·te·ri·al/ (-bak-ter´e-al) destroying or suppressing growth or reproduction of bacteria; also, an agent that does this.

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This occurs when a microorganism is found on or in a person without causing a disease.

Mentioned in: Isolation
 patients--an open uncontrolled clinical trial. Ann Clin Microbiol Antimicrob. 2004;3:9.

(32.) Kotilainen P, Routamaa M, Peltonen R, Evesti P, Eerola E, Salmenlinna S, et al. Eradication of methicillin-resistant Staphylococcous aureus from a health center ward and associated nursing home. Arch Intern Med. 2001 ; 161:859-63.

(33.) Mody L, Kauffman CA, McNeil SA, Galecki AT, Bradley SF. Mupirocin-based decolonization decolonization

Process by which colonies become independent of the colonizing country. Decolonization was gradual and peaceful for some British colonies largely settled by expatriates but violent for others, where native rebellions were energized by nationalism.
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: a randomized ran·dom·ize  
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(35.) Larssen KW, Jacobsen T, Bergh K, Tvete P, Kvello E, Seheel O. Outbreak of methicillin-resistant Staphylococcus aureus in two nursing homes in Central Norway Central Norway (Norwegian: Midt-Norge (bokmål); Midt-Noreg (nynorsk)) is an administrative division that includes the counties of Nord-Trøndelag, Sør-Trøndelag and Møre og Romsdal and is used by, for example, the Regional Health . J Hosp Infect. 2005;60:312-6.

Mette Damkjaer Bartels, * Kit Boye, * Anders Rhod Larsen, ([dagger]) Robert Skov, ([dagger]) and Henrik Westh * ([dagger])

* Hvidovre Hospital, Hvidovre, Denmark; and ([dagger]) Statens Serum Institut Statens Serum Institut (English: the State Serum Institute), or SSI for short, is a Danish sector research institute located on the island of Amager in Copenhagen. , Copenhagen, Denmark

Address for correspondence: Henrik Westh, Department of Clinical Microbiology 445, Hvidovre Hospital, DK-2650 Hvidovre, Denmark; email: henrik.westh@hvh.regionh.dk

The opinions expressed by authors contributing to this journal do not necessarily reflect the opinions of the Centers for Disease Control and Prevention or the institutions with which the authors are affiliated.
Table 1. Demographics, infection types, and
distribution of MRSA types in 143 cases of MRSA *

                             Community      Community    Hospital
                               onset,        onset,      acquired
                           community risk    no risk    in Denmark

No.cases                         30            35           37
Male, %                          67            46           57
Median age, y (range)        27 (1-74)      32 (0-90)   80 (28-94)
Carrier, no.                     8              1           2
Type of infection, no.
  SSTI                           22            29           17
  Blood                          0              0           2
Deep-seated abscess, no.         0              1           5
UTI                              0              4           8
LRTI                             0              0           3
Four most common CCs
(87% of all isolates)
  CC 8, %                        23            34           81
    t008, no.                    3              7           0
    t024, no.                    3              5           28
  CC 80, %                       20            34           3
  CC 30, %                       50             6           0
  CC 5, %                        3             11           5
Other MILST types,%              4             15           11
PVL positive, %                  83            80           8
SCCmec IV, %                     93            89           89

                           Community onset,
                              healthcare
                              associated        Imported

No.cases                          36
Male, %                           42
Median age, y (range)         82 (6-95)
Carrier, no.                      2           4 ([dagger])
Type of infection, no.
  SSTI                            23
  Blood                           2
Deep-seated abscess, no.          3
UTI                               5
LRTI                              1           1 ([dagger])
Four most common CCs
(87% of all isolates)
  CC 8, %                         69
    t008, no.                     2
    t024, no.                     20
  CC 80, %                        0
  CC 30, %                        0
  CC 5, %                         8
Other MILST types,%               23
PVL positive, %                   17
SCCmec IV, %                      81

* MRSA, methicillin-resistant Staphylococcus aureus; SSTI, skin and
soft tissue infection; UTI, urinary tract infection, LRTI, lower
respiratory tract infection; CC, clonal complex; MLST, multilocus
sequence typing; PVL, Panton-Valentine leukocidin; SCC, staphylococcal
chromosome cassette.

([dagger]) A t037/ST239-III was imported from Greece, where this MRSA
is common (20); ST239 is closely related to ST8 and is the well-known
pandemic Brazilian/Hungarian clone (21); t041/ST111 was imported from
an Italian hospital; t003/ST225-II (New York clone) was imported from
Germany; t354/ST22-IV, a variant of EMRSA15, was imported from
Lanzarote (Spain); and t067/ST125-I was imported from Spain.

Table 2. Genetic backgrounds and epidemiologic
information on MRSA isolates *

               Multilocus                         Isolates, no.
CC                 ST             Spa types       (total in CC)

CC1               ST1                t175               2
            ST748 ([dagger])         t127             1 (3)
CC5               ST5                t002               7
                 ST125               t067               1
                 ST225               t003            4 (12)
CC8               ST8          t024, t008, t430      56/12/2
                                  t064, t351           1/1
                 ST239               t037            3 (75)
CC15             ST15                t084               1
CC22              ST22         t005, t022, t354       2/1/1
                                     t541               1
            ST737 ([dagger])         t542             1 (6)
CC30              ST30               t019              17
CC45              ST45         t015, t026, t065       2/1/1
                                  t116, t350         1/1 (6)
CC97              ST97               t359               1
Singleton         ST80         t044, t376, t455    16/2/1 (19)
Singleton        ST111               t041               1
Singleton        ST152               t355               1
Total                                                  142

                                                        HA/HCA MRSA
                                                          or CR/NR
            No. PVL-positive       SCCmec types          MRSA % in
CC              isolates          (no. isolates)           the CC

CC1                2                    IV                  33/67
                   0                     V
CC5                7           I (3), II (1), IV (3)        58/42
                   0                     I
                   4                    II
CC8            12 (t008)                IV                  74/26
                   0                    IV
                   0              III (2), NT (1)
CC15               0                     V                  100/0
CC22               0               IV, NT (t022)            50/50
                   0                    IV
                   0                    IV
CC30               17                   IV                  0/100
CC45               0              IV, V (t026 and           100/0
                   0                   t116)
CC97               1                     V                  100/0
Singleton          19                   IV                   5/95
Singleton          0                     I                  100/0
Singleton          1                     V                  0/100
Total              63

* MRSA, methicillin-resistant Staphylococcus aureus; CC, clonal
complex; ST, sequence type, PVL, Panton-Valentine leukocidin,
SCC, staphylococcal chromosome cassette; HA/HCA/CR/NR, hospital
acquired/healthcare associated/community risk/no risk. One
isolate could only be typed by spa and multilocus sequence
typing and is not included in the table.

([dagger]) New ST.
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Title Annotation:RESEARCH
Author:Bartels, Mette Damkjaer; Boye, Kit; Larsen, Anders Rhod; Skov, Robert; Westh, Henrik
Publication:Emerging Infectious Diseases
Geographic Code:4EUDE
Date:Oct 1, 2007
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