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Proximity to pollution sources and risk of amphibian limb malformation.


The cause of limb deformities in wild amphibian amphibian, in zoology
amphibian, in zoology, cold-blooded vertebrate animal of the class Amphibia. There are three living orders of amphibians: the frogs and toads (order Anura, or Salientia), the salamanders and newts (order Urodela, or Caudata), and the
 populations remains unclear, even though the apparent increase in prevalence of this condition may have implications for human health. Few studies have simultaneously assessed the effect of multiple exposures on the risk of limb deformities. In a cross-sectional survey of 5,264 hylid and ranid metamorphs in 42 Vermont wetlands, we assessed independent risk factors for nontraumatic limb malformation malformation /mal·for·ma·tion/ (-for-ma´shun)
1. a type of anomaly.

2. a morphologic defect of an organ or larger region of the body, resulting from an intrinsically abnormal developmental process.
. The rate of nontraumatic limb malformation varied by location from 0 to 10.2%. Analysis of a subsample sub·sam·ple  
n.
A sample drawn from a larger sample.

tr.v. sub·sam·pled, sub·sam·pling, sub·sam·ples
To take a subsample from (a larger sample).
 did not demonstrate any evidence of infection with the parasite Ribeiroia. We used geographic information system geographic information system (GIS)

Computerized system that relates and displays data collected from a geographic entity in the form of a map. The ability of GIS to overlay existing data with new information and display it in colour on a computer screen is used primarily to
 (GIS) land-use/land-cover data to validate field observations of land use in the proximity of study wetlands. In a multiple logistic regression In statistics, logistic regression is a regression model for binomially distributed response/dependent variables. It is useful for modeling the probability of an event occurring as a function of other factors.  model that included land use as well as developmental stage, genus, and water-quality measures, proximity to agricultural land use was associated with an increased risk of limb malformation (odds ratio = 2.26; 95% confidence interval confidence interval,
n a statistical device used to determine the range within which an acceptable datum would fall. Confidence intervals are usually expressed in percentages, typically 95% or 99%.
, 1.42-3.58; p < 0.001). The overall discriminant dis·crim·i·nant  
n.
An expression used to distinguish or separate other expressions in a quantity or equation.
 power of the statistical model was high (C = 0.79). These findings from one of the largest systematic surveys to date provide support for the role of chemical toxicants in the development of amphibian limb malformation and demonstrate the value of an epidemiologic approach to this problem. Key words: agriculture, amphibian, animal sentinel, malformation, teratogen teratogen /ter·a·to·gen/ (ter´ah-to-jen) any agent or factor that induces or increases the incidence of abnormal prenatal development.teratogen´ic

te·rat·o·gen
n.
, water pollution. Environ Health Perspect 113:1497-1501 (2005). doi:10.1289/ehp.7585 available via http://dx.doi.org/[Online 11 July 2005]

**********

In 1995, amphibians amphibians

members of the animal class Amphibia. Includes frogs, toads, newts, salamanders and cecilians all capable of living on land or in water.
 with severely malformed mal·formed
adj.
Abnormally or faultily formed.
 limbs were discovered in Minnesota (Blaustein and Johnson 2003). The next year, amphibians with truncated and missing limbs were found at several sites stretching along 120 miles of Vermont's Lake Champlain shoreline (Levey et al. 2003). Since then, elevated rates of developmental abnormalities have been found in most U.S. states and Canada, raising concern that amphibians are serving as animal sentinels This article or section may contain original research or unverified claims.

Please help Wikipedia by adding references. See the for details.
This article has been tagged since September 2007.
 of human environmental health hazards There are numerous health hazards that can affect people in their natural environment. Examples of environmental health hazards are :
  • allergens
  • anthrax
  • antibiotic agents in animals destined for human consumption
  • antibiotic resistance
  • arbovirus
 (Burkhart et al. 1998, 2000; Daszak et al. 2001; van der Schalie et al. 1999).

The exact etiology of amphibian limb abnormalities (including missing, extra, and malformed limbs) remains unclear. The major suspects have been ultraviolet B (UV-B UV-B or UVB
Noun

ultraviolet radiation with a range of 280-320 nanometres
) radiation, trauma, parasitic trematode trematode: see fluke; Platyhelminthes.  infestation infestation /in·fes·ta·tion/ (-fes-ta´shun) parasitic attack or subsistence on the skin and/or its appendages, as by insects, mites, or ticks; sometimes used to denote parasitic invasion of the organs and tissues, as by helminths. , and xenobiotic xen·o·bi·ot·ic
adj.
Foreign to the body or to living organisms. Used of chemical compounds.

n.
A xenobiotic chemical.



xenobiotic

any substance, harmful or not, that is foreign to the animal's biological system.
 pesticides or chemicals (Ouellet 2000). Although many researchers have searched for single causative agents, some have stated that the etiology is likely multifactorial multifactorial /mul·ti·fac·to·ri·al/ (mul?te-fak-tor´e-al)
1. of or pertaining to, or arising through the action of many factors.

2.
 (Linder et al. 2001).

In laboratory settings, some evidence has supported each of the etiologic hypotheses. Controlled exposure to UV radiation has produced amphibian dysmorphogenesis (Ankley et al. 1998, 2002) and truncated limbs (Levey et al. 2003; Meteyer et al. 2000; Ouellet et al. 1997). These studies, however, have generally failed to reproduce the spectrum of abnormalities occurring in wild populations. The abnormalities that result from experimental UV exposures are most often bilateral and symmetrical (Ankley et al. 1998, 2002), whereas abnormalities found in the wild are not (Levey et al. 2003; Meteyer et al. 2000; Ouellet et al 1997). Furthermore, the levels of UV exposure used in the laboratory experiments may not reflect real-world exposures.

Another primary etiologic hypothesis of limb abnormality is trauma related to predation predation

Form of food getting in which one animal, the predator, eats an animal of another species, the prey, immediately after killing it or, in some cases, while it is still alive. Most predators are generalists; they eat a variety of prey species.
. Although predation can account for some forms of abnormality in the wild, the hypothesis, more generally, has not been supported as the primary cause of increased amphibian abnormality rates in recent years (Blaustein and Johnson 2003; Levey et al. 2003). Although predation should always be considered in this field of research, it is likely that deformities caused by predation have a different etiologic pathway and therefore, in research, should be distinguished from the other hypotheses of dysmorphogenesis.

Macroparasite infection is the third etiologic hypothesis of amphibian limb abnormality. The parasite hypothesis continues to receive substantial attention and is perhaps the most thoroughly explored of all the hypotheses (Blaustein and Johnson 2003). The most commonly explored parasite is the trematode Ribeiraia ondatrae. Infestation with Ribeiroia is associated with limb abnormalities in some amphibian species (Johnson et al. 2001, 2002). Laboratory experiments suggest that the mechanism of Ribeiroia-induced abnormalities may involve mechanical disturbance of growing limb cells or interference with a retinoid-sensitive signaling pathway (Johnson and Sutherland 2003).

The role of exposure to potential chemical teratogens teratogens, (trat´ōjens),
n.pl agents that cause congenital malformations and developmental abnormalities if introduced during gestation.
 has also been investigated. Candidate toxicants have included nonpolar nonpolar

not having poles; not exhibiting dipole characteristics.
 organics, metals (Burkhart et al. 1998; Linder et al. 2001; Stocum 2000), herbicides, pesticides, and other components of agricultural runoff (Bishop et al. 1999; Ouellet et al. 1997), sewage (Linder et al. 2001; Ouellet 2000), and pharmaceuticals (Mizgireuv et al. 1984). Such chemical agents could directly affect amphibians' development or act indirectly by increasing amphibian susceptibility to other environmental stressors such as infectious disease Infectious disease

A pathological condition spread among biological species. Infectious diseases, although varied in their effects, are always associated with viruses, bacteria, fungi, protozoa, multicellular parasites and aberrant proteins known as prions.
, predation, and UV-B light. Investigations into chemically mediated limb abnormalities have used two major approaches. First, amphibian eggs and larvae Larvae, in Roman religion
Larvae: see lemures.
 have been exposed to water and sediment collected from field sites with high abnormality rates (Fort et al. 1999, 2001). Second, the specific suspected amphibian teratogens have been tested in the laboratory using toxicologic assays (Degitz et al. 2000, 2003; LaClair et al. 1998). Together, these studies have shown that exposure to field-collected water and sediment can result in limb abnormalities and that a number of chemicals can have severe teratogenic effects on amphibians related to dose or concentration (Burkhart et al. 1998). However, there are inconsistencies between laboratory and field results and no single causative chemical has been identified.

The chemical teratogen hypothesis has particular relevance to human health risk. If waterborne chemical toxicants are involved in amphibian malformations, there is potential for shared exposure with human populations through dermal dermal /der·mal/ (der´mal) pertaining to the dermis or to the skin.

der·mal or der·mic
adj.
Of or relating to the skin or dermis.
 contact, ingestion ingestion /in·ges·tion/ (-chun) the taking of food, drugs, etc., into the body by mouth.

in·ges·tion
n.
1. The act of taking food and drink into the body by the mouth.

2.
, and inhalation routes.

Despite the fact that multiple hypotheses have emerged to explain the phenomenon of amphibian limb abnormalities, few studies to date have made use of research techniques allowing examination of multiple factors. For example, most studies of chemical causes did not also collect data regarding infectious agents, and few of the studies have used multivariable statistical techniques to model the relative effects of different factors.

We performed a cross-sectional study cross-sectional study
n.
See synchronic study.


cross-sectional study,
n the scientific method for the analysis of data gathered from two or more samples at one point in time.
 of risk factors for deformities in a large systematic sample of amphibians. The large sample size allowed for the creation of a multivariate model to test the association between amphibian limb malformation and a number of independent risk factors. The types of land use adjacent to wetlands where amphibians were surveyed served as a proxy measure for possible sources of water pollution. We hypothesized that, after adjusting for confounding confounding

when the effects of two, or more, processes on results cannot be separated, the results are said to be confounded, a cause of bias in disease studies.


confounding factor
 factors, amphibians in wetlands adjacent to agriculture, septic systems, or lawns would be at greater risk for amphibian hind limb malformation due to the waterborne chemical runoff associated with such land uses.

Materials and Methods

Study sample. Between 24 May and 28 August 2002, amphibian specimens consisting of two species of hylids (Hyla versicolor versicolor /ver·si·co·lor/ (ver?si-kol´er) variegated; having a variety of colors, or changing in color.  and Pseudacris crucifer) and four species of ranids (Rana pipiens, Rana catesbeiana, Rana clamitans, and Rana sylvatica) were collected from 42 wetlands in the Lake Champlain Basin of Vermont. We selected wetlands in a representative fashion along an urbanization gradient ranging from relatively undisturbed forest habitat (Green Mountain National Forest Green Mountain National Forest is a national forest located in Vermont. It is roughly 300,000 acres (0 km), of various types of forest supporting many species of wildlife. ), to rural communities, to neighborhoods in Burlington. To collect specimens at each site, standardized collection methodology consisted of pipe samplers (steel pipe, 35-cm diameter, 0.91 m long) and dip nets (46 cm x 23 cm with 1-mm mesh). An attempt was made to collect up to 300 specimens from each site (a maximum of 100 during each of three visits). After capture, specimens were first anesthetized a·nes·the·tize also a·naes·the·tize  
tr.v. a·nes·the·tized, a·nes·the·tiz·ing, a·nes·the·tiz·es
To induce anesthesia in.



a·nes
 in a solution of tricaine methanesulfonate tricaine methanesulfonate

the most commonly used anesthetic for fish. It is dissolved in water and enters into the systemic circulation via the gills, producing a general anesthesia.
 and then placed in 70% ethanol, according to according to
prep.
1. As stated or indicated by; on the authority of: according to historians.

2. In keeping with: according to instructions.

3.
 protocols for the study that were approved by the Yale University Yale University, at New Haven, Conn.; coeducational. Chartered as a collegiate school for men in 1701 largely as a result of the efforts of James Pierpont, it opened at Killingworth (now Clinton) in 1702, moved (1707) to Saybrook (now Old Saybrook), and in 1716 was  Animal Care and Use Committee. Each specimen was later examined in the laboratory in order to determine genus and species, Gosner stage, and presence of malformation. A subsample of specimens was examined by dissection for the presence of parasite metacercariae, including Ribeiroia.

Exposure assessment. For each of the 42 wetlands, on-site field observations were used to determine whether agriculture or lawns were located proximate proximate /prox·i·mate/ (prok´si-mit) immediate or nearest.

prox·i·mate
adj.
Closely related in space, time, or order; very near; proximal.



proximate

immediate; nearest.
 to the wetland. The presence of agriculture and lawns were then scored as yes/no responses for each site. In addition, we independently estimated land use/land cover within 200 m of each amphibian sample site, which was calculated using geographic information system (GIS) data. The latitude and longitude latitude and longitude

Coordinate system by which the position or location of any place on the Earth's surface can be determined and described. Latitude is a measurement of location north or south of the Equator.
 coordinates of each site were used with land-use/land-cover GIS layers to map the land use within 200 m of each site. The Raster land-cover data set from Vermont GIS (U.S. Geological Survey The term geological survey can be used to describe both the conduct of a survey for geological purposes and an institution holding geological information.

A geological survey
 1999) was brought into ArcMap (Environmental Systems Research Institute, Redlands, CA) and was converted to vector data (polygons) to allow clipping of the features for each buffer zone buffer zone
n.
A neutral area between hostile or belligerent forces that serves to prevent conflict.

Noun 1. buffer zone
. These polygons were then clipped using the geoprocessing command by a 200 m buffer surrounding the GPS (global positioning satellite) coordinates representing the study site's general area. These clipped land-use/land-cover areas were then summarized for each location by their classification codes to calculate land-cover percentages represented in the data. For this analysis, the 21 possible land-use categories were used to determine the presence of agriculture or forest. We compared the GIS measures for agriculture and forest with field observations of agriculture and lawns. There was a strong correlation between GIS coded agriculture land-use and field observations of agriculture and lawn near the study site (p < 0.0001 for both). Both observed agriculture and lawns were negatively correlated with GIS land-use estimates for forest cover (p < 0.0001 for both).

Several quantitative measurements were made at each site, including pH, conductivity, dissolved oxygen, temperature, total nitrogen, and total phosphorus for the water samples. If more than one measurement took place at an individual wetland, the measurements were averaged together for that site.

As an additional investigation into the possible role of parasitic infection, a representative sample of snails from the study wetlands was investigated for evidence of Ribeiroia infection.

Case definition. Each individual specimen was examined by a trained technician and classified according to a case definition adapted from a well-established amphibian limb abnormality classification scheme (Meteyer et al. 2000). To be classified as a "case" of limb malformation, a specimen had to exhibit one of the following: missing or reduced hind limb elements, complete but malformed hind limb, and/or duplicated hind limb elements or segments.

For the analysis of limb malformations, we included only those specimens with Gosner stage of [greater than or equal to] 26 (Gosner 1960). At this stage, hind limbs are visible, and it is possible to assess whether gross deformities are present.

Of the original 5,983 specimens, this led to the exclusion of 684 with stage < 26, and 27 with missing stage, leaving 5,272. An additional 8 cases were excluded because of unknown length, leaving 5,264 in the final study sample. For our case definition, we excluded trauma deformities (abnormalities that appeared to be a result of trauma, including presence of open wounds, edema edema (ĭdē`mə), abnormal accumulation of fluid in the body tissues or in the body cavities causing swelling or distention of the affected parts. , scarring, bone fractures, etc.) because of the differing etiologies of trauma and nontrauma abnormalities.

Statistical analysis. All analyses were performed using SAS (1) (SAS Institute Inc., Cary, NC, www.sas.com) A software company that specializes in data warehousing and decision support software based on the SAS System. Founded in 1976, SAS is one of the world's largest privately held software companies. See SAS System.  software (version 8.02; SAS Institute SAS Institute Inc., headquartered in Cary, North Carolina, USA, has been a major producer of software since it was founded in 1976 by Anthony Barr, James Goodnight, John Sall and Jane Helwig.  Inc., Cary, NC).

Simple frequencies were calculated for categorical variables, including Gosner stage, genus, water-quality measures, presence of pollution sources, and presence of limb malformation. Means and SDs were calculated for continuous variables.

To determine bivariate bi·var·i·ate  
adj.
Mathematics Having two variables: bivariate binomial distribution.

Adj. 1.
 associations between exposures and rates of malformation, we performed simple logistic regression. Odds ratios (ORs) and 95% confidence intervals (CIs) were calculated for each individual factor. An OR calculates the odds of a risk factor being present in the affected cases compared with the odds that it is present in the non-affected individuals. A multivariate logistic regression model was developed to determine the independent predictors of malformation. To determine which variables to include in the multivariate model, we examined collinearity collinearity

very high correlation between variables.
 between independent variables using correlation coefficients. Variables with correlations above levels at which multicollinearity would be considered likely (r > 0.40) were excluded from the multivariable analyses. We found that a number of variables had significant collinearity, including nitrogen and phosphorus (r = 0.67) and pH and dissolved oxygen (r = 0.79). Therefore, neither phosphorus nor pH was included in the final multivariate model.

The multivariate logistic regression analysis used a backward selection process to eliminate nonsignificant non·sig·nif·i·cant  
adj.
1. Not significant.

2. Having, producing, or being a value obtained from a statistical test that lies within the limits for being of random occurrence.
 variables from the model (criteria for elimination from the model set at p > 0.05). ORs, 95% CIs, and p-values for association between individual risk factors and limb malformation were determined for variables remaining in the final model. The overall discriminant power of the model was assessed using a C-staristic.

Results

Characteristics of study sample. Table 1 shows the characteristics of 5,264 specimens meeting eligibility criteria (specimens with Gosner stage of [greater than or equal to] 26). The average Gosner stage was 36 (field stage 4: toes 3-5 separated). Overall, 83 specimens (1.6%) showed evidence of nontraumatic limb malformation. The study-site--specific rate of malformation ranged from 0 to 10.2%. The lowest rates were found in the wetlands located in the Green Mountain National Forest. Table 1 also shows the relative prevalence of subtypes of nontraumatic malformation. The most common type was malformed limb or element (68 of 83), followed by missing limb or element (25 of 83). Some individuals had more than one type of abnormality.

Examination of a subsample of individual specimens (n = 40) revealed no evidence of Ribeiroia infection. Similarly, representative samples of host snails from the sample wetlands did not demonstrate evidence of Ribeiroia infection (Skelly Skel´ly

v. i. 1. To squint.
n. 1. A squint.
 D, unpublished data).

Exposure assessment. Table 2 summarizes the exposure characteristics of the 42 wetland study sites. More than 40% of the wetlands had some degree of agriculture nearby; this ranged from pastureland to cropland crop·land  
n.
Land that is fit or used for growing crops.
 to intensive dairy farming dairy farming

Form of animal husbandry that uses mammals, primarily cows, for the production of milk and products processed from it (including butter, cheese, and ice cream).
. Lawns were present near > 35% of wetlands. The wide range of values for water-quality measures reflects, in part, variations in runoff sources; the wide variability of conductivity reflects proximity to roads treated with salt in winter. The highest nitrogen readings were found in a pond located downhill from a dairy barn.

Risk factor analysis. Table 3 shows the simple and multiple logistic regression measures of association between different risk factors and nontraumatic amphibian limb malformation. In the simple (bivariate) analyses, Gosner stage, proximity to agriculture, proximity to lawns, and dissolved oxygen each showed a positive association with malformation.

In the multivariate logistic regression model, Gosner stage remained highly significantly associated with malformation (OR = 1.18; p < 0.0001). In other words Adv. 1. in other words - otherwise stated; "in other words, we are broke"
put differently
, the risk of malformation increased 18% for each increase in Gosner stage. Although malformation rates were slightly higher in ranids than in hylids, the effect of genus was not significant in the multivariate model. Furthermore, analyzing risk factors for malformation in ranid species alone or hylid species alone produced results similar to those of our combined model (data not shown). In the multivariate model, proximity to agriculture remained a highly significant predictor of malformation risk (OR = 2.26; 95% CI, 1.42-3.58; p < 0.001). None of the other independent variables tested showed a significant association in the multivariate model. The discrimination and fit of the logistic regression model were good, with a C-statistic = 0.79 and a p-value for the Hosmer-Lemeshow goodness-of-fit test of 0.10.

Discussion

The results of this study, based on one of the largest systematic sampling of limb deformities in wild amphibian populations to date, suggest that the composition of landscapes surrounding wetlands affects rates of limb malformation. In particular, proximity to human-associated land uses, including agriculture and lawns, is associated with an increased risk. This positive association persists even after adjusting for the effect of developmental stage and variation in water-quality measures such as nitrogen and pH. Proximity to agriculture was associated with a more than doubling of the risk of limb malformation.

Major strengths of this study include its sample size and systematic design. Although other studies have assessed agricultural land use in relation to amphibian population size in specific geographic areas (Davidson et al. 2001, 2002; Ray et al. 2002), few studies have assigned exposure variables based on observed pollution sources in a systematic manner in order to assess malformation rates. Several studies have discussed land use and land-use change as drivers of the abnormality and decline phenomena (Collins and Storfer 2003; McCallum and Trauth 2003) but have not gone on to analyze outcomes with respect to these factors.

Unlike many previous studies, this study uses a human epidemiologic methodology to assess an ecologic problem (with possible relevance to human health). Evaluation of multiple stressors will require continued development of effective study methodologies and a movement away from the single-agent hypothesis testing of the past (Rabinowitz et al. 1999). To our knowledge, this is one of the first studies to use multivariate techniques (which require a large sample size) to evaluate the relative importance of multiple factors while adjusting for possible confounding. This reduces the possibility that an observed association between a risk factor (e.g., agriculture) and the outcome of interest (limb malformation) is due in fact to a confounding risk factor that is linked with both the exposure and the outcome in such a way that spurious etiologic associations are inferred.

What is the possible biologic basis of the observation that proximity to agricultural land use is associated with risk for amphibian limb malformation? We argue that exposure to sources of anthropogenic an·thro·po·gen·ic  
adj.
1. Of or relating to anthropogenesis.

2. Caused by humans: anthropogenic degradation of the environment.
 pollution is a likely explanation. Without identification of specific compounds, any specific hypothesis remains speculative. However, agricultural runoff may include a variety of chemicals, including pesticides, animal wastes, and fertilizers, that could threaten water quality. One study of an agricultural watershed found evidence of 38 pesticides in water samples, including 30 herbicides, 4 fungicides This page aims to list well-known chemical compounds, to stimulate the creation of Wikipedia articles.

This list is not necessarily complete or up to date – if you see an article that should be here but isn't (or one that shouldn't be here but is), please update the page
, 3 insecticides, and 1 metabolite metabolite, organic compound that is a starting material in, an intermediate in, or an end product of metabolism. Starting materials are substances, usually small and of simple structure, absorbed by the organism as food.  of one of the herbicides (Kreuger 1998). Waterborne toxicants in agricultural runoff could directly affect development, either singly or in chemical mixtures (Burkhart et al. 2000). Agricultural runoff has been associated with impaired hatching success (De et al. 2002). Other lipophilic lipophilic,
adj/n the ability to dissolve or attach to lipids.

lipophilic (lipōfil´ik),
adj 1. showing a marked attraction to, or solubility in, lipids.
2.
 chemicals in runoff may also play a role--recent studies found that exposing Rana pipiens tadpoles Tadpoles are a psychedelic rock band formed in 1990 in New York City by Todd Parker (guitars/vocals) and Michael Kite Audino (drums.) In 1992, Nick Kramer (guitars/vocals), David Max (bass) and Andrew Jackson (guitars) of the fledgling Manhattan group, Hit, joined the Tadpoles  to extracted compounds from semipermeable membrane semipermeable membrane Nephrology A dialysis membrane with a pore size that permits passage of solvent and some solute molecules. See Cell membrane.  devices in freshwater ponds could cause malformation in the presence of UV radiation (Bridges et al. 2004).

There are a number of biologic mechanisms by which chemicals in agricultural runoff could cause deformities. A recent study found an association between agricultural runoff including the herbicides atrazine atrazine

a triazine herbicide; it is not poisonous at levels of intake likely to be encountered in agriculture.

atrazine Toxicology A nonphytoestrogenic herbicide. See Phytoestrogen.
, deethyl-atrazine, simazine simazine

a triazine weedkiller that is toxic if livestock are allowed access shortly after the plants have been sprayed. Signs of toxicity include staggering in sheep and colic in horses.
, metolachlor, dimethenamide, chlopyralide, dicamba, and bentazone and plasma retinoid retinoid /ret·i·noid/ (ret´i-noid)
1. resembling the retina.

2. retinal, retinol, or any structurally similar natural derivative or synthetic compound, with or without vitamin A activity.
 levels in Rana catesbiana (Berube et al. 2005); retinoids Retinoids
A derivative of synthetic Vitamin A.

Mentioned in: Ichthyosis

retinoids (reˑ·t
 appear to function in signaling pathways for limb development (Stocum 2000). It is also possible that herbicides or other organic compounds could directly affect the expression of genes that help determine limb development. Because thyroid hormone Thyroid hormone

Any of the chemical messengers produced by the thyroid gland, including thyrocalcitonin, a polypeptide, and thyroxine and triiodothyronine, which are iodinated thyronines. See Hormone, Thyrocalcitonin, Thyroid gland, Thyroxine
 has been found to protect against the development of abnormalities in the experimental setting (Fort et al. 2001), chemically induced chemically induced,
adj initiating biologic action or response by the introduction of a chemical.
 alterations of thyroid function could potentially increase the malformation rate.

Another potential mechanism for the effect of agricultural chemicals on amphibian malformation could be through effects on either parasite population density or on host immune function Immune function
The state in which the body recognizes foreign materials and is able to neutralize them before they can do any harm.

Mentioned in: Herbalism, Traditional Chinese, Stress Reduction
 leading to increased rate of parasite infection parasite infection Infectious disease An infection by a parasite caused, in developed nations, by exposure to uncooked fish–sushi, linked to anisakiasis or uncooked meat–pork, linked to trichinosis, recent travel to a developing nation–eg,  (Christin et al. 2003). Our investigation considered the possibility that parasitic infection with Ribeiroia could have played a role in the etiology of limb deformities at the study sites. However, our analysis to date does not support the parasitic infection hypothesis. Examination of individual amphibians as well as representative samples of host snails from the study sites did not reveal evidence that either this parasite or trematode infection in general was playing a role in the causation of limb malformation.

Some studies have suggested that nutrient loads such as phosphorus and nitrogen, present in some agricultural runoff, could contribute to developmental abnormality risk by contributing to eutrophication eutrophication (ytrō'fĭkā`shən), aging of a lake by biological enrichment of its water. In a young lake the water is cold and clear, supporting little life.  (Johnson and Chase 2004). In this sample, we had the opportunity to adjust for the effect of measured nutrients in sampled water and found that these nutrients did not remain significant predictors of malformation in the multivariate model.

There are several possible reasons why the overall rate of nontraumatic hind limb abnormality in this study sample (1.6%) was lower than figures reported for amphibian limb abnormalities in some other surveys (Burkhart et al. 2000). First, there was variation in rates of malformations between study sites, with rates in excess of 10% at some sites. The systematic nature of the present survey was designed to reduce selection bias, and most study sites were consequently selected without prior knowledge of the site-specific rate of amphibian limb abnormalities. As a result, in some locations, no abnormalities were detected. Second, we used a more restrictive case definition than many other surveys, taking care to exclude trauma-induced limb deformities, thereby lowering the overall abnormality rate. Third, rates of abnormalities fluctuate from year to year in individual wetlands, and some of the ponds sampled had experienced abnormality rates as high as 30% in previous years (Levey et al. 2003). It therefore seems likely that the variability in malformation rates between ponds was related to environmental factors.

The study relied on a limited number of measurements of water quality, as well as visual observations of land use as an indicator of potential pollution sources. Therefore, the observed associations between runoff sources, measured water quality, and malformation rate must be viewed as preliminary. Determining exposure at the level of the group rather than the individual risks the "ecologic fallacy" of assigning potential causation to one factor when in fact another, unmeasured factor is actually responsible. Although the rate of malformation in ponds near agriculture was increased, it could be that this difference was due to other factors that were not assessed. Further studies involving direct measurements of toxicants in water, and case-control comparisons of affected and unaffected individuals need to be carried out in order to identify candidate toxicants or chemical mixtures that could be investigated in the laboratory setting.

Water-quality measures are dependent on multiple factors and vary over a season and year to year depending on runoff sources, rainfall, temperature, and other factors. By using a limited number of water-quality measures taken during a single year, it is possible that some exposure misclassification occurred, with water conditions during sensitive periods of amphibian development varying from the measurements at the time of sampling. However, such misclassification, in epidemiologic studies of cause and effect, tends to be nondifferential and bias the results toward observing no effect (Checkoway and Eisen 2005). Therefore, the fact that we found strong associations between a number of exposures and the rate of malformation indicates that such associations are real and significant. The good discrimination and fit of the multivariate logistic regression model further support the strength of the observed associations.

The human health relevance of these findings remains to be determined. If a chemical toxicant toxicant /tox·i·cant/ (tok´si-kant)
1. poisonous.

2. poison.


tox·i·cant
n.
1. A poison or poisonous agent.

2. An intoxicant.

adj.
 or mixture could be identified that is capable of causing limb malformations in wild amphibians, several additional lines of investigation could shed light on whether a risk to humans exists. First, it would be useful to know what human health outcome would be analogous to amphibian limb deformities; this could be explored if gene sequence homology homology (hōmŏl`əjē), in biology, the correspondence between structures of different species that is attributable to their evolutionary descent from a common ancestor.  between humans and amphibians was present for target genes affected by the toxicants. Second, it would be important to establish a dose-response relationship and determine whether environmental exposures to such a toxicant would be capable of causing human health effects. Finally, epidemiologic studies including both amphibian and human populations could determine whether rates of malformation in amphibians show a correlation with a suspected human health outcome. Although to date none of these connections have been established, they will be worthy of further exploration if confirmatory studies support the role of toxicant chemicals in the etiology of amphibian developmental abnormalities.

Received 15 September 2004; accepted 11 July 2005.

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Brynn Taylor, (1,2,3) David Skelly, (1) Livia K. Demarchis, (1) Martin D. Slade, (2) Deron Galusha, (2) and Peter M. Rabinowitz (2)

(1) School of Forestry and Environmental Studies, Yale University, New Haven, Connecticut, USA; (2) Occupational and Environmental Medicine Program and (3) Department of Epidemiology and Public Health, Yale University School of Medicine, New Haven, Connecticut, USA

Address correspondence to P.M. Rabinowitz, Yale University School of Medicine, Occupational and Environmental Medicine Program, 135 College St., New Haven, CT 06510 USA. Telephone: (203) 785-5885. Fax: (203) 785-7391. E-mail: peter.rabinowitz@yale.edu

We thank the field and laboratory research staff: S. Bolden, N. Cothran, B. Fellman, K. Freidenberg, N. Freidenfelds, and N. Rabinowitz. M.R. Cullen provided assistance with study design and analysis. M. Hines of the U.S. Geological Survey assisted with the geographic information system coding of land use. R. Levey provided critical logistical support and advice.

This study was funded in part by the National Institutes of Health/National Science Foundation Ecology of Infectious Diseases Program (National Institute of Environmental Health Sciences The National Institute of Environmental Health Sciences (NIEHS) is one of 27 Institutes and Centers of the National Institutes of Health (NIH),which is a component of the Department of Health and Human Services (DHHS). The Director of the NIEHS is Dr. David A. Schwartz.  grant 5R01 ES011067).

The authors declare they have no competing financial interests.
Table 1. Characteristics of the study population (n= 5,264).

Species                 No. (%)       Gosner stage     Malformation
                                     (mean [+ or -]       [n(%)]
                                           SD)

Hyla versicolor        235 (4.5)    36.0 [+ or -] 6.4     4 (1.7)
Pseudacris crucifer    895 (17.0)   34.8 [+ or -] 6.2     6 (0.7)
Total hylids          1,130 (21.5)  35.0 [+ or -] 6.2    10 (0.9)
Rana catesbeiana       319 (6.1)    37.7 [+ or -] 6.7     5 (1.6)
Rana clamitans        1,176 (22.3)  40.3 [+ or -] 6.2    32 (2.7)
Rana pipiens          1,702 (32.3)  35.8 [+ or -] 8.0    33 (1.9)
Rana sylvatica         937 (17.8)   31.7 [+ or -] 5.2     3 (0.3)
Total ranids          4,134 (78.5)  36.3 [+ or -] 7.5    73 (1.8)
Total                 5,264 (100)   36.0 [+ or -] 7.2    83 (1.6)

                          Malformation type (a)

Species               Missing   Malformed    Extra

Hyla versicolor         1           3          0
Pseudacris crucifer     3           3          0
Total hylids            4           6          0
Rana catesbeiana        2           3          0
Rana clamitans          9          28          2
Rana pipiens           10          28          0
Rana sylvatica          0           3          0
Total ranids           21          62          2
Total                  25          68          2

(a) Some individuals exhibited more than one type of malformed limb
or element.

Table 2. Exposure assessment for study sites (n = 42).

Characteristic                                  Exposure

Proximity to pollution sources
[n (%)]
  Agriculture nearby or adjacent                17 (40.5)
  Lawn nearby or adjacent                       15 (35.7)
Water-quality measures
  pH                                    7.6 [+ or -] 0.9 (5.7-9.7)
  Conductivity ((micro)S)             303.3 [+ or -] 307.8 (10-1,350)
  Dissolved oxygen (mg/L)               6.5 [+ or -] 3.4 (1.2-18.3)
  Temperature ([degrees]C)             21.2 [+ or -] 3.6 (12.8-29.1)
  Total nitrogen (mg/L)                 0.8 [+ or -] 0.8 (0.1-5.4)
  Total phosphorus (mg/L)               0.2 [+ or -] 0.4 (0.004-2.2)

[micro]S, micro-Siemens. Values shown are mean [+ or -] SD (range)
except where indicated.

Table 3. Risk factors for nontraumatic limb malformation.

                                    Bivariate analysis

Risk factor                           OR (95% CI)       p-Value
Characteristic
 Gosner stage                       1.20 (1.14-1.26)   <0.0001
 Genus (Rana vs. Hyla)              2.01 (1.04-3.91)    0.04
Proximity to pollution sources
 Agriculture (nearby or adjacent)   3.08 (1.96-4.85)   <0.0001
 Septic system or lawn adjacent     2.06 (1.34-3.19)   <0.001
Water-quality measures
 Conductivity ([micro]S)            1.00 (1.00-1.00)    0.46
 Dissolved oxygen (mg/L)            1.14 (1.06-1.23)   <0.001
 Temperature ([degrees]C)           1.05 (0.98-1.13)    0.14
 Total nitrogen (mg/L)              1.22 10.91-1.63)    0.18

                                    Multivariate model (a)

Risk factor                           OR (95% CI)       p-Value
Characteristic
 Gosner stage                       1.18 (1.13-1.24)    -0.0001
 Genus (Rana vs. Hyla)                     --             --
Proximity to pollution sources
 Agriculture (nearby or adjacent)   2.26 (1.42-3.58)    -0.001
 Septic system or lawn adjacent            --             --
Water-quality measures
 Conductivity ([micro]S)                   --             --
 Dissolved oxygen (mg/L)                   --             --
 Temperature ([degrees]C)                  --             --
 Total nitrogen (mg/L)                     --             --

[micro]S, micro-Siemens.

(a) Certain variables were removed from the model during backward
selection modeling (--; exclusion criteria, p > 0.05).
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