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Protein switch curls bacterial propellers.


Without its flagella flagella /fla·gel·la/ (flah-jel´ah) [L.] plural of flagellum.
flagella
(fl
, many a bacterium would truly be up a creek without a paddle.

A bacterium may have a dozen or so of these corkscrew-shaped tails that act as little propellers. A rotary motor protein at the base twirls each flagellum flagellum

Hairlike structure that acts mainly as an organelle of movement in the cells of many living organisms. Characteristic of the protozoan group Mastigophora, flagella also occur on the sex cells of algae, fungi (see fungus), mosses, and slime molds.
 counterclockwise. To change course, a bacterium briefly reverses the flagellar flagellar /fla·gel·lar/ (flah-jel´ar) of or relating to a flagellum.

flagellar

of or pertaining to a flagellum.
 rotation and then tumbles about until heading off in the new direction.

This quick switch alters not only the bacterium's path, but the shape of the flagellum as well. Now, an international team of researchers has determined what happens to the complex structure of a flagellum when the bacterium throws its motors into reverse.

Keiichi Namba of the International Institute for Advanced Research at the Matsushita Electric Industrial Co. in Seika, Japan, and his colleagues have obtained high-resolution, X-ray fiber diffraction Fiber diffraction is a scattering technique in which molecular structure is determined from scattering data (usually of X-rays or electrons) from filaments composed of a regular array of molecules distinguished by a single direction (the fiber axis).  patterns of the three-dimensional structure of bacterial flagella. Their images reveal a mechanism that enables a flagellum to switch from its ordinary loose-corkscrew shape, wound in one direction, to a curlier corkscrew corkscrew

a deformity in which the affected part is spiraled like a corkscrew.


corkscrew claw
a probably heritable defect of the lateral claw, usually of the front feet, of cattle causing serious lameness.
 wound in the opposite direction.

The team's report appears in the February Nature Structural Biology Structural biology is a branch of molecular biology concerned with the study of the architecture and shape of biological macromolecules—proteins and nucleic acids in particular—and what causes them to have the structures they have. .

The findings represent "a dramatic step forward," says Donald L.D. Caspar of Florida State University Florida State University, at Tallahassee; coeducational; chartered 1851, opened 1857. Present name was adopted in 1947. Special research facilities include those in nuclear science and oceanography.  in Tallahassee. "The bacterial flagellar system has been one of the most significant models of switching mechanisms in biological structures."

A bacterial flagellum is a complex structure made of a bundle of 11 protein strands that wrap gently around each other like the fibers in a rope. In the dramatic change of shape, the strands of a flagellum slide past each other.

The corkscrew structure arises from the mix of two different types of strands in the bundle. Like mirror-image spiral staircases, one type has an intrinsically left-handed twist and the other a right-handed twist. Bacteria genetically mutated to produce only one type of strand have straight flagella--which don't make very good propellers, Caspar notes.

When a normal, corkscrew flagellum reverses rotation, mechanical stress forces the interlocking interlocking /in·ter·lock·ing/ (-lok´ing) closely joined, as by hooks or dovetails; locking into one another.
interlocking Obstetrics A rare complication of vaginal delivery of twins; the 1st
 protein strands to move past each other slightly and fasten together in different spots. "The slipping switch propagates over the entire length of a 10- to 15-micrometer-long flagellar filament filament, in astronomy: see chromosphere.  within a few tens of milliseconds," says Namba. This speedy shape shift occurs without major rearrangement of the strands, which remain entwined in the same order.

This subtle slip-and-click mechanism accounts for another observation concerning the lengths of the individual strands. Each strand consists of a chain of protein subunits linked end-to-end like the cars of a train. The subunits in the loose corkscrew flagella are about 0.08 nanometer farther apart than those in the curlier tails.

In a conventional scheme of protein refolding, says Caspar, "it's very hard to visualize a structural change in a protein molecule Noun 1. protein molecule - any large molecule containing chains of amino acids linked by peptide bonds
molecule - (physics and chemistry) the simplest structural unit of an element or compound
 that involves such a small displacement." The current mechanism can account for the tiny change, he adds, because the slippage causes the subunits on neighboring strands to mesh with only a slightly different spacing.

Namba expects that the switch might also be used in other motor proteins. He says that hemoglobin, the blood molecule that alters its structure when it binds to oxygen, also changes its overall shape without major rearrangements of its components.

Namba and his colleagues have already obtained even higher resolution images of flagellar filaments, which should show "the atomic detail of the subunit structure and subunit-subunit interactions," he says. "Once the crystal structure is solved and the atomic model is built, we will be able to look into the details of the slipping switch mechanism."
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Title Annotation:research on flagellum activity
Author:Wu, Corinna
Publication:Science News
Date:Feb 7, 1998
Words:580
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