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Nipah virus in Lyle's flying foxes, Cambodia.


We conducted a survey in Cambodia in 2000 on henipavirus infection among several bat species, including flying foxes, and persons exposed to these animals. Among 1,072 bat serum samples tested by enzyme-linked immunosorbent assay enzyme-linked immunosorbent assay
n.
ELISA.


Enzyme-linked immunosorbent assay (ELISA)
A diagnostic blood test used to screen patients for AIDS or other viruses.
, antibodies reactive to Nipah virus Nip·ah virus
n.
A single-stranded RNA virus that is transmitted from animals and causes fever and myalgias that can progress to encephalitis in humans.
 (NiV) antigen were detected only in Pteropus lylei species; Cynopterus sphinx, Hipposideros larvatus, Scotophilus kuhlii, Chaerephon plicata, Taphozous melanopogon, and T. theobaldi species were negative. Seroneutralization applied on a subset of 156 serum samples confirmed these results. None of the 8 human serum samples was NiV seropositive seropositive /se·ro·pos·i·tive/ (-poz´i-tiv) showing positive results on serological examination; showing a high level of antibody.

se·ro·pos·i·tive
adj.
 with the seroneutralization test. One virus isolate exhibiting cytopathic effect with syncytia was obtained from 769 urine samples collected at roosts of P. lylei specimens. Partial molecular characterization of this isolate demonstrated that it was closely related to NiV. These results strengthen the hypothesis that flying foxes could be the natural host of NiV. Surveillance of human cases should be implemented.

**********

The new genus Henipavirus contains 2 species, Hendra virus Hen·dra virus
n.
A paramyxovirus that causes encephalitis in humans and is transmitted from animals.



Hendra virus

the cause of a highly fatal respiratory virus disease of horses.
 (HeV) and Nipah virus (NiV), in the subfamily subfamily /sub·fam·i·ly/ (sub´fam-i-le) a taxonomic division between a family and a tribe.

sub·fam·i·ly
n.
A taxonomic category ranking between a family and a genus.
 of the Paramyxovirinae, which also includes Respirovirus, Rubulavirus, Morbillivirus Morbillivirus /Mor·bil·li·vi·rus/ (-vi?rus) measles-like viruses; a genus of viruses of the family Paramyxoviridae, including the agents of measles and canine distemper.

Mor·bil·li·vi·rus
n.
, and Avulavirus genera (1). HeV and NiV have emerged within the last 10 years and have been shown to be highly pathogenic in animals and humans. HeV was identified in 1994 in Brisbane during an outbreak of acute respiratory syndrome 'respiratory syndrome' A relatively specific immune response to high-dose rifampin therapy, characterized by a flu-like complex, dyspnea and wheezing, leukopenia, thrombocytopenia; other hypersensitivity reactions caused by rifampin include flushing, fever,  in 21 horses, of which 14 died. Two humans were also affected with the same syndrome, and 1 died (2,3). A second outbreak that occurred 1 year later [approximately equal to] 1,000 km north of Brisbane caused the death of 2 horses and their owner. Severe encephalitis encephalitis (ĕnsĕf'əlī`təs), general term used to describe a diffuse inflammation of the brain and spinal cord, usually of viral origin, often transmitted by mosquitoes, in contrast to a bacterial infection of the meninges  followed by mild meningitis affected the owner 1 year after his exposure (4). NiV was discovered in Malaysia during a major outbreak of acute respiratory syndrome in pigs in 1998; it caused severe acute encephalitis among >283 pig farmers (with 109 deaths) and among 35 abattoir abattoir (ăb'ətwär`) [Fr.], building for butchering. The abattoir houses facilities to slaughter animals; dress, cut and inspect meats; and refrigerate, cure, and manufacture byproducts.  workers in Singapore (5,6). In 2001, 2003, and 2004, this virus emerged in Bangladesh; 4 outbreaks were reported with high death rates (32%-75%) (7). Person-to-person transmission was suspected during the last outbreak (8), which raised concerns about human infection from an epizootic ep·i·zo·ot·ic
adj.
Affecting a large number of animals at the same time within a particular region or geographic area. Used of a disease.



ep
 or deliberate release of this highly virulent virus. Serologic se·rol·o·gy  
n. pl. se·rol·o·gies
1. The science that deals with the properties and reactions of serums, especially blood serum.

2.
 and virologic investigations suggested that these 2 viruses shared Pteropus bats or flying foxes as natural host reservoirs (9-12). Furthermore, 2 other paramyxo-oviruses belonging to the genus Rubulavirus have been associated with flying foxes: Menangle virus Menangle virus

a paramyxovirus in the genus Rubulavirus that causes a spectrum of reproductive diseases in pigs including abortion and fetal abnormalities; transmitted from bats.
, isolated in 1997 from pigs in Australia (13), and Tioman virus, isolated in 1999 from fruit bats in Malaysia (14).

Distribution of the henipaviruses is restricted so far to Australia, Malaysia, and Bangladesh. The distribution of flying foxes ([approximately equal to] 58 species), considered as natural hosts of these viruses, extends from the east coast of Africa across south and Southeast Asia, east to the Philippines and Pacific islands, and south to Australia (15). It could be conjectured that henipavirus or similar viruses occur in flying foxes elsewhere and could emerge as a human pathogen. Three species belonging to the genus Pteropus (Pteropus lylei, P. hypomelanus, and P. vampyrus) have been identified in Cambodia (15), and antibodies to NiV-like virus have recently been detected in Lyle's Flying Fox The Lyle's Flying Fox (Pteropus lylei) is a species of bat in the Pteropodidae family. It is found in Cambodia, Thailand, and Vietnam. Source
  • Chiroptera Specialist Group 1996. Pteropus lylei. 2006 IUCN Red List of Threatened Species.
 (P. lylei) (16).

We conducted a survey in Cambodia, initiated in 2000, on henipavirus infection among several bat species, especially flying foxes, and persons exposed to these animals. Here, we confirm the presence of NiV antibodies and report NiV isolation and characterization from Lyle's bats in Cambodia.

Materials and Methods

Sample Collection

A total of 1,303 bats were sampled from 35 locations in 9 Cambodian provinces, from September 2000 to May 2001. Of these, 467 came from restaurants in Phnom Penh and belonged to the species P. lylei. Blood samples were collected at the restaurants when the animals were killed for meat. The other 836 animals were captured in 9 provinces at roosts by hand and with hand nets, or along flyways by night with mist nets or harp traps. Anesthetized a·nes·the·tize also a·naes·the·tize  
tr.v. a·nes·the·tized, a·nes·the·tiz·ing, a·nes·the·tiz·es
To induce anesthesia in.



a·nes
 captured animals were euthanized by cardiac blood puncture. These animals belonged to 16 species representing 6 of the 7 bat families known from Cambodia (17). Serum samples from 1,072 animals were taken for serologic investigation.

Under 6 roosts of flying foxes (where individual bats from the 2 species P. lylei and P. vampyrus could live together), urine samples were collected from June 2003 to August 2004 on plastic sheets, following a published procedure (18). The roosts, of 400 to 600 flying foxes each, were located in Phnom Penh, Battambang, Kampong Cham, Kandal, Prey Veng, and Siem Reap Provinces (Figure 1). The roosts were visited 4 times, when the animals were present (the roosts are deserted from December to May). No roost of Variable Flying Foxes (P. hypomelanus) could be located. A total of 769 urine samples stored at 80[degrees]C were available for virologic investigation.

[FIGURE 1 OMITTED]

Serum samples were obtained in January 2001 from 8 persons who gave their oral consent and who were exposed to NiV-seropositive Lyle's Flying Fox bats. Four men worked in restaurants where bats are eaten and handled the animals; 4 women worked at the same place and slaughtered and cooked the bats.

Serologic Tests

Bat sera were first screened for antibodies against NiV by enzyme-linked immunosorbent assay (ELISA ELISA (e-li´sah) Enzyme-Linked Immuno-Sorbent Assay; any enzyme immunoassay using an enzyme-labeled immunoreactant and an immunosorbent.

ELISA
n.
), as described (19). Antigens were prepared in the biosafety level biosafety level Epidemiology A classification for the degree of caution required when working with specific groups of pathogens. See Maximum containment facility.  Laboratory Jean Merieux in Lyon from Vero E6 cells infected with NiV and inactivated inactivated

rendered inactive; the activity is destroyed.


inactivated viruses
treated so that they are no longer able to produce evidence of growth or damaging effect on tissue.
 by [gamma] irradiation as described (20). Sera were diluted 1:100. Peroxidase-labeled protein A/G (Pierce, Rockford, IL, USA) was used as conjugate conjugate /con·ju·gate/ (kon´jdbobr-gat)
1. paired, or equally coupled; working in unison.

2. a conjugate diameter of the pelvic inlet; used alone usually to denote the true conjugate diameter; see
. Three negative control serum samples and 1 positive control sample were included in each run.

Seroneutralization tests were carried out under biosafety level 4 conditions. Serum samples were heated for 30 min at 56[degrees]C and then were titrated ti·trate  
tr. & intr.v. ti·trat·ed, ti·trat·ing, ti·trates
To determine the concentration of (a solution) by titration or perform the operation of titration.
 with 3 dilutions (1:10; 1:20, and 1:40) in a 96-well microtiter plate (4 wells per dilution). Equal volume of NiV (100 50% tissue culture infective dose [TCI (Trustworthy Computing Initiative) An umbrella term from Microsoft for its efforts to improve security in Windows. TCI was announced in 2002 after viruses such as Code Red and Nimda had succeeded in attacking numerous Windows computers. [D.sub.50]] in 50 [micro]L) was added to all sera, and the plate was incubated for 1 h at 37[degrees]C. Veto E6 cells (5 x [10.sup.4] in 100 [micro]L) were added to all wells, and the plates were incubated at 37[degrees]C for 4 days in a C[O.sub.2] chamber at 37[degrees]C. Characteristic NiV cytopathic effect (CPE (Customer Premises Equipment) Communications equipment that resides on the customer's premises.

CPE - Customer Premises Equipment
) showing large syncytia was observed under a microscope in each well. The number of virus-positive wells was confirmed after fixation in 10% formaldehyde for 1 h and amido-schwartz staining for 30 min. Positive (anti-NiV serum obtained from a convalescent-phase specimen) and negative sera were included for controls in each plate. Toxicity of the sera for Veto cells was observed on uninfected cells in the presence of l:10 serum dilution. The neutralization neutralization, chemical reaction, according to the Arrhenius theory of acids and bases, in which a water solution of acid is mixed with a water solution of base to form a salt and water; this reaction is complete only if the resulting solution has neither acidic nor  titer of each sample was defined as the last dilution in which at least half of the monolayer mon·o·lay·er
n.
1. A film or layer one molecule thick formed at the interface between water and either oil or air by a substance such as a partially esterified fatty acid that contains both hydrophobic and hydrophilic groups in the same
 was intact (TCI[D.sub.50]).

Virus Isolation and Identification

Subconfluent Vero E6 cells (ATCC ATCC American Type Culture Collection, see there  CRL-1586) in flasks of 25 [cm.sup.2] with filter caps were inoculated with 500 [micro]L of viral transport medium containing the urine-impregnated cotton swab. The cell cultures were placed in a C[O.sub.2] incubator at 37[degrees]C and examined daily for CPE such as formation of multinucleated multinucleated

characterized by having more than one nucleus per cell.


multinucleated giant cell
see giant cell.
 giant cells. If a CPE was observed, supernatants and cells were collected separately and frozen at -80[degrees]C.

RNA RNA: see nucleic acid.
RNA
 in full ribonucleic acid

One of the two main types of nucleic acid (the other being DNA), which functions in cellular protein synthesis in all living cells and replaces DNA as the carrier of genetic
 was extracted from supernatants by using QIAMP viral RNA mini kit (Qiagen, Hilden, Germany) according to the manufacturer's procedure. Identification of paramyxoviruses or NiV were performed with reverse transcriptase-polymerase chain reaction (RT-PCR RT-PCR

reverse transcriptase-polymerase chain reaction. See PCR1.
) with specific primers for the phosphoprotein phosphoprotein /phos·pho·pro·tein/ (-pro´ten) a conjugated protein in which phosphoric acid is esterified with a hydroxy amino acid.

phos·pho·pro·tein
n.
 (P) gene of Paramyxoviridae or specific primers for the nucleoprotein nucleoprotein

Macromolecular complex consisting of a protein linked to a nucleic acid, either DNA or RNA. The proteins that combine with DNA are generally of characteristic types called histones and protamines.
 (N) gene of NiV (21).

Molecular Characterization

To amplify and sequence the coding domains of the N and glycoprotein glycoprotein (glī'kōprō`tēn), organic compound composed of both a protein and a carbohydrate joined together in covalent chemical linkage.  (G) genes, primers were designed by using Primer3 software (22), according to the published nucleotide sequences of NiV, with RNA extracted from supernatants of positive isolates. Reverse transcription reverse transcription
n.
The process by which DNA is synthesized from an RNA template.
 and amplification with these primers were conducted. The amplified products were observed after electrophoresis on a 1% agarose agarose

more highly purified form of agar with similar uses to agar and widely used in the separation of nucleic acid fragments.
 gel with ethidium bromide staining; then purified, amplified products were sequenced with the dye termination cycle sequencing technique (Genome Express Company, Meylan, France). Sequences sent by the company were verified and aligned by using ClustalW program version 1.83 (23). Phylogenetic phy·lo·ge·net·ic
adj.
1. Of or relating to phylogeny or phylogenetics.

2. Relating to or based on evolutionary development or history.
 analysis was conducted with PHYLIP PHYLIP Phylogeny Inference Package (genetics software)  sequence analysis package (version 3.6 alpha 3) (24).

Results

Serologic Testing

Results of ELISAs for antibodies reactive with NiV antigens in 1,072 bats serum samples are shown in the Table. A positive signal was identified only in P. lylei. Fifty (10.9%) of the 458 tested samples from this species were positive.

Forty-three of the 50 ELISA-positive bat serum samples were available for confirmation by serum neutralization test. One produced cell toxicity, 1 was negative (titer <1:10), and 41 were positive. Neutralization at dilutions of 1:10, 1:20, and [greater than or equal to] 1:40 was found in 1, 11, and 29 serum specimens, respectively. A subset (n = 156) of the 1,022 ELISA-negative serum specimens were tested by seroneutralization; 5 produced cell toxicity. Six among 43 ELISA-negative serum samples from P. lylei were positive (4 with a titer = 1:10 and 2 with a titer = 1:20). The 108 ELISA-negative serum samples from other captured species, Cynopterus sphinx (n = 15), Hipposideros larvatus (n = 15), S. kuhlii (n = 15), Chaerephon plicata (n = 27), Taphozous melanopogon (n = 12), and T. theobaldi (n = 24), were negative. None of the human sera were NiV seropositive with the seroneutralization test.

Virus Isolation and Molecular Characterization

Attempts to isolate viruses producing a CPE were positive for 2 samples among the 769 urine samples. These 2 samples, CSUR CSUR Computing Surveys 381 and CSUR382, were collected consecutively on the same morning (April 23, 2004) at the same roost of P. lylei specimens, located in a pagoda pagoda (pəgō`də), name given in the East to a variety of buildings of tower form that are usually part of a temple or monastery group and serve as shrines.  in the village of Bay Damran in Battambang Province. CPE showing syncytia was detected 6 days after injection into Vero E6 cells.

RT-PCR performed on RNA extracted from infected cell supernatants using specific primers for the P gene of Paramyxoviridae, as well as specific primers for the N gene of NiV, produced PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
 products of the expected size (138 bp and 228 bp, respectively). When the 2 partial N region products from the 2 Cambodian strains were sequenced, 2 identical nucleotide sequences were found that shared 97.4% homology to that of the NiV strain isolated in Malaysia, a finding that suggests that the Cambodian isolates belonged to the NiV species.

Further molecular characterization was achieved when the N and G genes of CSUR381 and CSUR382 isolates were amplified and sequenced. The nucleotide sequences of the 2 isolates were identical. The N sequence of CSUR381 was compared with the N sequences of the Malaysian NiV strains available in November 2004 in GenBank (AF212302, NC-0027281 derived from AF212303, AY029768, and AY029767 from human isolates; AJ564621, AJ564622, AJ564623, and AJ627196 from pig isolates; and AF376747 from a P. hypomelanus isolate). We observed that the Cambodian N nucleotide sequence shared 98% identity with the Malaysian AF21232 N sequence (32 nucleotides among 1,599 were divergent). The identity was 98.7% (525/532) for the N amino acid sequences (see online Appendix Figure 1, available at http://www.cdc.gov/ncidod/ EID/volllno07/ 04-1350-appG1 .htm). All the changes of the 532 amino acid (aa) N protein occurred at the carboxyl carboxyl /car·box·yl/ (kahr-bok´sil) the monovalent radical —COOH, occurring in those organic acids termed carboxylic acids.

car·box·yl
n.
 terminus, with the following mutations: I429V, G432E, N457D, 1502T, E511G, L518P, and A521T. The G sequence of the Cambodian CSUR381 strain was also compared to the available G sequences of the Malaysian NiV isolates. The percentage of nucleotide homology was 98.2% (32 nucleotide changes among 1,809), and the percentage of amino acid homology was 98.5% (593/602). Amino acid changes were N5S, V24I, R248K, G327D, I408V, V426I, L470Q, N478S, and N481D (see online Appendix Figure 2, available at http://www.cdc.gov/ncidod/EID/voll1no07/04-1350-appG2.htm). These results confirmed that the Cambodian isolates are closely related to the other NiV isolates.

[FIGURE 2 OMITTED]

Phylogenetic analysis using parsimony par·si·mo·ny  
n.
1. Unusual or excessive frugality; extreme economy or stinginess.

2. Adoption of the simplest assumption in the formulation of a theory or in the interpretation of data, especially in accordance with the rule of
 method (24) and different N sequences of viruses of the Paramyxovirinae subfamily confirmed that the Cambodian isolates and the Malaysian NiV isolates were significantly similar and that the Cambodian strains probably belong to the NiV species (Figure 2). Analyses performed by using other methods (neighbor joining and maximum likelihood) or using the G sequences reached the same conclusion (data not shown). The N and G nucleotide sequences of the isolate CSUR381 were deposited in GenBank (accession nos. AY858110 and AY858111).

Discussion

Our serologic study confirms the presence in Cambodia of antibodies to a NiV-like virus among Lyle's Flying Foxes (P. lylei), as reported by Olson et al. in 2002 (16). We could not detect antibodies against NiV among bats belonging to other genera, including insectivorous insectivorous

eating insects to the extent that they are significant as a contributor to the patient's diet.
 bats. Some Malaysian specimens of 2 frugivorous frugivorous

fruit-eating.
 species (Cynopterus brachyotis and Eonycteris spelaea) and 1 insectivorous species (S. kuhlii) have been found carrying neutralizing antibodies to NiV in Malaysia. These specimens were collected soon after an outbreak, when the virus was expected to circulate with high prevalence (10). Data on bat infection at sites of outbreaks in Bangladesh are limited, although antibodies against NiV have been detected in the Indian Flying Fox, P. giganteus, a species possibly conspecific con·spe·cif·ic  
adj.
Of or belonging to the same species.

n.
An organism belonging to the same species as another.

Noun 1.
 with P vampyrus (7). Although our sample is not representative of the bat population in Cambodia, our results strengthen the hypothesis that flying foxes could be the natural host of NiV. The results of both ELISA and neutralization tests used on this convenient panel of sera gave a relative sensitivity of 87% (41/47) and specificity of 99% (145/146). These findings are in accordance with the ELISA performance observed in other studies (25).

This description of NiV is the first in Cambodia. NiV has been isolated in 2 other countries. The NiV isolate obtained from P. lylei is the first isolate obtained from a Pteropus species different from P. hypomelanus, the first NiV-infected species in Malaysia. Investigation in Bangladesh, where the NiV outbreak occurred, did not detect any virus strains among bats; antibodies to Nipah-like virus were detected among specimens belonging to the species P. giganteus (7). Our results indicate that further henipavirus-related infection can be expected within the area of distribution of flying foxes and that NiV could emerge within this wide area.

Identification of the isolate was performed by molecular characterization on the N and G coding domains located at the 2 ends of structural proteins genes. We observed a higher amino acid diversity at the carboxyl terminus of the N protein between the Malaysian and Cambodian NiV isolates. The N central domain (from aa 171 to aa 383) of the members of the Paramyxovirinae family is the most conserved region, which seems to be involved in its interactions with other functional proteins, such as the phosphoprotein (P) and the polymerase (L). Moreover the N proteins of paramyxoviruses possess 3 highly conserved regions (26). The first region (QXW(I,V)XXXK(A,C)XT, X representing any amino acid) is located between aa 171 and aa 181, the second region (FXXT(I,L)(R,K)u (G,A)(L,I,V)XT, where u represents an aromatic amino acid) from aa 267 to aa 277, and the third region (FXXXXYPXXuSuAMG) from aa 322 to aa 336. All 3 regions were conserved in the sequence of the Cambodian NiV strain. Conversely, the C-terminal part of N (from aa 384 to aa 532) overlaps antigenic epitopes and is the most variable domain (26). However, no change occurred in the 29 aa C terminal region (aa 468-496) involved in the binding to the P protein (27). Lastly, the N481D change observed in the Cambodian NiV G protein induced the disappearance of 1 of the 8 N-linked glycosylation sites of the protein (28).

Only 2 NiV isolates were obtained from 6 roosts in 6 provinces that were investigated. This finding is not unusual with these pathogens and bats: no NiV strain was isolated from Variable Flying Foxes (P. hypomelanus) and Large Flying Foxes (P. vampyrus) during the 1999 Malaysian outbreak (11). Two NiV isolates were obtained in the postoutbreak period (August 1999-June 2000) from 263 urine samples of Variable Flying Fox bats (12) and, to our knowledge, no isolate from bats in Bangladesh has been reported. Furthermore, only 3 isolates of HeV were obtained from 652 bats tissue samples collected around the epidemic sites in Australia (9). The presence of antibodies in roosts from Kompong Cham Province suggests that the virus could be widely present in the country. However, the low rate of NiV recovery from P. lylei, when compared to the high number of NiV antibody-positive bats (10.9%), suggests that the virus may not be sustained lifelong in animals or that it may remain at low titers and occasionally emerges and is released in biologic fluids. The 8 persons exposed to Lyle's Flying Fox bats, some of which were NiV-seropositive, were NiV-seronegative. Thus, the animals may not have been carrying the virus during their captivity.

This is the first time an NiV has been isolated in a country where no outbreak has been reported. This situation requires strategies to manage this pathogen and to prevent an outbreak. Recommendations should be made to the population in areas where flying foxes' roosts are identified to minimize exposure to them. A national hospital-based surveillance of acute encephalitis should be implemented; in the upcoming months, such surveillance will be instituted in the area where the virus was isolated. Surveillance of respiratory syndrome among pigs has to be estimated, as intensive pig farming Intensive piggeries (or hog lots) are a type of factory farm specialized for the raising of domestic pigs up to slaughter weight. In this system of pig production, grower pigs are housed indoors in group-housing or straw-lined sheds, whilst pregnant sows are confined in sow  is not the rule in the area. The potential of the Cambodian NiV isolate to cause fatal encephalitis in hamsters will also be investigated (29). Lastly, ecologic studies, including the dynamics of flying fox populations and their relationships with NiV, should be considered for a better understanding of its transmission and maintenance among these populations.
Table. Seum samples from 1,072 bats, Cambodia, reactive by
enzyme-linked immunosorbent assay to Nipah virus, September
2000-May 2001

Species names                            Negative    Positive

Frugivorous
  Cynopterus brachyotis                       1          0
  Cynopterus sphinx                          68          0
  Macroglossus sobrinus                       1          0
  Pteropus lylei                            408         50
  Roussetus leschenaulti                     15          0
Insectivorous                                            0
  Chaerephon plicata                        153          0
  Hipposideros armiger                        1          0
  H.larvatus                                 81          0
  H. pomona                                   2          0
  Murina cyclotis                             1          0
  Rhinolophus acuminatus                      2          0
  R. luctus                                   1          0
  Scotophilus kuhlii                         98          0
  Taphozous melanopogon                      69          0
  T. theobaldi                              121          0
Total                                     1,022         50


Acknowledgments

We thank Kaw Bing Chua for providing Malaysian NiV strain and a positive human control serum for seroneutralization tests against NiV and Cambodian authorities for authorizing bats captures.

Sophie Molia and Dorian Counor were recipients of a fellowship from the Fondation de France, Jeunesse Internationale. Part of this work received financial support from the "Action Concertde des Instituts Pasteur."

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n.
See epidemic hemorrhagic fever.
 and hantavirus pulmonary syndrome hantavirus pulmonary syndrome An often fatal RTI caused by a hantavirus; the first cluster occurred in the Four Corners region of Southwestern US Epidemiology Mean age 32, 61% ♀, 72% Native American Case definition Unexplained bilateral interstitial . Seoul: WHO Collaborating Center for Virus Reference and Research; 1999. p. 87-91.

(20.) Guillaume V, Contamin H, Loth P, Georges-Courbot MC, Lefeuvre A, Marianneau P, et al. Nipah virus: vaccination and passive protection studies in a hamster model. J Virol. 2004;78:834-40.

(21.) Chua KB, Bellini WJ, Rota PA, Harcourt BH, Tamin A, Lam SK, et al. Nipah virus: a recently emergent deadly paramyxovirus. Science. 2000;288:1432-5.

(22.) Rozen S, Skaletsky H. Primer3 on the WWW WWW or W3: see World Wide Web.


(World Wide Web) The common host name for a Web server. The "www-dot" prefix on Web addresses is widely used to provide a recognizable way of identifying a Web site.
 for general users and for biologist programmers. In: Misener S, Krawetz SA, editors. Bioinformatics methods and protocols in the series Methods in Molecular Biology. Totowa (NJ): Humana Press; 2000. p. 365-86.

(23.) Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment A multiple sequence alignment (MSA) is a sequence alignment of three or more biological sequences, generally protein, DNA, or RNA. In general, the input set of query sequences are assumed to have an evolutionary relationship by which they share a lineage and are descended from a  through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994;22:4673-80.

(24.) Felsenstein J. PHYLIP: phylogeny inference package, version 3.6 alpha 3. Seattle (WA): University of Washington; 2002.

(25.) Daniels P, Ksiazek T, Eaton BT. Laboratory diagnosis of Nipah and Hendra virus infections. Microbes Infect. 2001;3:289-95.

(26.) Gill DR Takai S, Portner A, Kingsbury DW. Mapping of antigenic domains of Sendai virus nucleocapsid nucleocapsid /nu·cleo·cap·sid/ (noo?kle-o-kap´sid) a unit of viral structure, consisting of a capsid with the enclosed nucleic acid.

nu·cle·o·cap·sid
n.
 protein expressed in Escherichia coli. J Virol. 1988;62:4805-8.

(27.) Chan YP, Koh CL, Lam SK, Wang LF. Mapping of domains responsible for nucleocapsid protein-phosphoprotein interaction of henipaviruses. J Gen Virol. 2004;85:1675-84.

(28.) Harcourt BH, Tamin A, Kziazek TG, Rollin PE, Anderson LJ, Bellini WJ, et al. Molecular characterization of Nipah virus, a newly emergent paramyxovirus. Virology. 2000;271:334-9.

(29.) Wong KT, Grosjean I, Brisson C, Blanquier B, Fevre-Montange M, Bernard A, et al. A golden hamster for human acute Nipah virus infection. Am J Pathol. 2003;163:2127 37.

Jean-Marc Reynes, * Dorian Counor, * Sivuth Ong, * Caroline Faure, ([dagger]) Vansay Seng, * Sophie Molia, * Joe Walston, ([double dagger]) Marie Claude Georges-Courbot, ([dagger]) Vincent Deubel, ([dagger]) and Jean-Louis Sarthou *

* Institut Pasteur du Cambodge, Phnom Penh, Cambodia; ([dagger]) Institut Pasteur, Lyon, France; and ([double dagger]) Wildlife Conservation Society, Phnom Penh, Cambodia

Dr. Reynes is a veterinarian veterinarian /vet·er·i·nar·i·an/ (vet?er-i-nar´e-an) a person trained and authorized to practice veterinary medicine and surgery; a doctor of veterinary medicine.

vet·er·i·nar·i·an
n.
 and a medical virologist virologist

microbiologist specializing in virology.
. He is chief of the virology unit at the Institut Pasteur du Cambodge. His research interests include arboviruses arboviruses (ar´bōvī´rsz),
n.
, HIV HIV (Human Immunodeficiency Virus), either of two closely related retroviruses that invade T-helper lymphocytes and are responsible for AIDS. There are two types of HIV: HIV-1 and HIV-2. HIV-1 is responsible for the vast majority of AIDS in the United States. , rabies, and emerging infectious diseases.

Address for correspondence: Jean-Marc Reynes, Institut Pasteur de Madagascar, BP 1274, Ambatofotsikely, 101 Antananarivo, Republique de Madagascar; fax: 261-20-22-407-17; email: jmreynes@pasteur.mg
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Title Annotation:RESEARCH
Author:Sarthou, Jean-Louis
Publication:Emerging Infectious Diseases
Geographic Code:9CAMB
Date:Jul 1, 2005
Words:4071
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