New drugs with that enzymatic touch.New drugs with that enzymatic touch Serendipity serendipity happy finding of an unexpected object or solution while searching for something else. was key in the discoverynearly 60 years ago that a common mold produced a substance fatal to bacteria -- leading to the broad availability of penicillin. But the present-day search for new drugs, combining computers with chemical acumen, is a far more premediated pursuit. Two studies reported this week, which target specific enzymes essential to disease-causing microorganisms, show just how calculating drug design has become. At Astra Alab in Sodertalje, in Sweden,scientists have made finely tuned inhibitors of an enzyme needed in the synthesis of lipopolysaccharide lipopolysaccharide /lipo·poly·sac·cha·ride/ (-pol?e-sak´ah-rid) 1. a molecule in which lipids and polysaccharides are linked. 2. (LPS LPS - Sets with restricted universal quantifiers. ["Logic Programming with Sets", G. Kuper, J Computer Sys Sci 41:44-64 (1990)]. ). LPS is found exclusively in the cell walls of gram-negative bacteria, a broad classification that includes Salmonella species, Escherichia coli Escherichia coli (ĕsh'ərĭk`ēə kō`lī), common bacterium that normally inhabits the intestinal tracts of humans and animals, but can cause infection in other parts of the body, especially the urinary tract. and many others. Because the inhibitor's target enzyme is not present in mammalian cells, the new class of synthetic drugs will attack certain bacteria and be nontoxic to the host, say the scientists in the June 25 NATURE. But the group found that making theinhibitors is not enough, since the "foreign" structures cannot pass through the cytoplasmic cytoplasmic pertaining to or included in cytoplasm. cytoplasmic inclusions include secretory inclusions (enzymes, acids, proteins, mucosubstances), nutritive inclusions (glycogen, lipids), pigment granules (melanin, lipofuscin, membranes of bacteria in large engogh amounts to be lethal. The scientists thus used a surprise-attack approach: They linked the inhibitors to protein fragments recognized by several bacterial transport mechanisms, enabling them to be taken into the unsuspecting cells. Once inside, the fragments are degraded and the inhibitors are released, killing the bacteria. Another study, also reported inNATURE, attempts to optimize the effectiveness of azidothymidine azidothymidine: see AZT. (AZT AZT or zidovudine (zīdō`vy dēn'), drug used to treat patients infected with the human immunodeficiency virus (HIV), which causes AIDS; also called ), the only drug thus far approved in the United States for the treatment of AIDS (SN: 3/28/87, p.198). Scientists at the Wellcome Research Laboratories in Kent, England, cloned the gene for reverse transcriptase, the enzyme necessary for replication of the AIDS virus and the target for AZT. Mutations induced in the gene at selected sites can eliminate activity of the enzyme, say the scientists, who are now inserting the mutant genes back into viruses to see whether such mutations will affect virus growth.
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