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New Study Shows Embryonic Stem Cell Lines Classified by ``MicroRNA'' Expression; Applied Biosystems TaqMan MicroRNA Assays Quantify Minute Changes in MicroRNA Expression during Stem Cell Differentiation.


SAN FRANCISCO -- Results May Have Implications in Determining Optimal Stem Cell Lines for Therapeutic Research

In conjunction with the International Society for Stem Cell stem cell

In living organisms, an undifferentiated cell that can produce other cells that eventually make up specialized tissues and organs. There are two major types of stem cells, embryonic and adult.
 Research (ISSCR ISSCR International Society for Stem Cell Research ) Annual Meeting, Applied Biosystems Group (NYSE NYSE

See: New York Stock Exchange
:ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother.


(Application Binary Interface) A specification for a specific hardware platform combined with the operating system.
), an Applera Corporation business, and the University of Colorado University of Colorado may refer to:
  • University of Colorado at Boulder (flagship campus)
  • University of Colorado at Colorado Springs
  • University of Colorado at Denver and Health Sciences Center
  • University of Colorado system
 today presented data using a preliminary version of Applied Biosystems TaqMan(R) MicroRNA Assays to profile microRNA (miRNA) expression in mouse stem cells stem cells, unspecialized human or animal cells that can produce mature specialized body cells and at the same time replicate themselves. Embryonic stem cells are derived from a blastocyst (the blastula typical of placental mammals; see embryo), which is very young .

The collaborative research study shows embryonic stem cells can be classified according to miRNA expression profiles, potentially having implications in determining optimal stem cell lines. Using TaqMan miRNA assays, researchers were able to accurately determine expression levels across a large panel of miRNAs and reveal precise changes in individual miRNA expression during stem cell differentiation. The assays discriminated between miRNAs differing by as little as a single nucleotide and between mature miRNAs and their precursors, even in single cells.

Increasing evidence indicates miRNAs, a recently discovered class of small RNA RNA: see nucleic acid.
RNA
 in full ribonucleic acid

One of the two main types of nucleic acid (the other being DNA), which functions in cellular protein synthesis in all living cells and replaces DNA as the carrier of genetic
 molecules, play a powerful gene regulatory role in cell differentiation and developmental biology Developmental biology

A large field of investigation that includes the study of all changes associated with an organism as it progresses through the life cycle. The life cycles of all multicellular organisms exhibit many similarities.
, cancer, and other diseases.

"The different microRNA expression profiles in embryonic stem cells suggest some embryonic cell cultures may contain variable subpopulations of spontaneously differentiated cells," said William M. Strauss, Ph.D., Assistant Research Professor, Department of Molecular, Chemical and Developmental Biology (MCDB MCDB Molecular, Cellular, and Developmental Biology
MCDB Monte Carlo Data Base (knowledge base for the LHC event samples)
MCDB Master Calibration Database
), University of Colorado, Boulder. "Our newly identified microRNAs could one day be used as molecular markers for monitoring differentiation within embryonic stem cell lines."

Researchers examined the expression levels of 252 mouse and human miRNAs in four mouse embryonic stem cell lines, differentiated embryoid bodies, and six mouse tissues. Preliminary results found embryonic stem cells could be accurately classified and differentiated from embryoid bodies and adult tissue using their distinct miRNA expression signatures.

"We are excited about the potential of our novel TaqMan(R) MicroRNA Assays to provide further insights about the role of miRNAs in cell differentiation," said Dennis Gilbert, Ph.D., Chief Scientific Officer, Applied Biosystems. "This is the first time a technology has been able to quantify miRNAs easily and accurately using starting samples as small as a single cell. These findings may hold promise for stem cell researchers as they identify optimal cell lines for use in therapeutic research."

In addition, data showed a total of 55 percent (138) of miRNAs studied were up-regulated by more than a fold, while only one percent (3) were down-regulated during the development of embryonic stem cells into embryoid bodies, suggesting miRNA expression levels globally increase during embryonic stem cell differentiation and may play an important role in activating lineage-specific genes.

Applied Biosystems TaqMan(R) MicroRNA Assays distinguish between mature miRNAs and their precursor form by using a proprietary stem-loop technology for reverse transcription reverse transcription
n.
The process by which DNA is synthesized from an RNA template.
 (RT) of the mature miRNA, followed by quantitative real-time PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
. Applied Biosystems currently has a large set of the miRNA assays in development and plans to commercialize its miRNA assay technology based on TaqMan(R) 5' nuclease nuclease /nu·cle·ase/ (noo´kle-as) any of a group of enzymes that split nucleic acids into nucleotides and other products.

nu·cle·ase
n.
 chemistry for real-time PCR.

The poster (#53), titled "TaqMan-Based MiRNA Profiles Classify Embryonic Stem Cells (ES) and Differentiated Cells," will be presented at ISSCR today, June 23, from 5:30 to 7 p.m. and during an ISSCR tutorial, titled "Real-Time PCR Applications for Stem Cell Research," from 7 to 8 p.m. To register for the tutorial go to http://info.appliedbiosystems.com/isscr. A copy of the poster can be downloaded at http://miRNA.appliedbiosystems.com.

About University of Colorado

The University of Colorado is a three-campus system with campuses in Boulder and Colorado Springs, and the recently consolidated Denver and Health Sciences Center campuses located in Denver and at the former Fitzsimons Army Base in Aurora. For further information, please contact Michele McKinney in the CU System Office of Institutional Relations at (303) 492-6206.

About Applera Corporation and Applied Biosystems

Applera Corporation consists of two operating groups. The Applied Biosystems Group serves the life science industry and research community by developing and marketing instrument-based systems, consumables, software, and services. Customers use these tools to analyze nucleic acids Nucleic acids
The cellular molecules DNA and RNA that act as coded instructions for the production of proteins and are copied for transmission of inherited traits.
 (DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 and RNA), small molecules, and proteins to make scientific discoveries, develop new pharmaceuticals, and conduct standardized testing. Applied Biosystems is headquartered in Foster City, CA, and reported sales of $1.7 billion during fiscal 2004. The Celera Genomics Group (NYSE:CRA See Community Reinvestment Act. ) is engaged principally in the discovery and development of targeted therapeutics for cancer, autoimmune and inflammatory diseases. Celera Genomics is leveraging its proteomic, bioinformatic, and genomic capabilities to identify and validate drug targets, and to discover and develop small molecule therapeutics. It is also seeking to advance therapeutic antibody and selected small molecule drug programs in collaboration with global technology and market leaders. Celera Diagnostics, a 50/50 joint venture between Applied Biosystems and Celera Genomics, is focused on discovery, development, and commercialization of diagnostic products. Information about Applera Corporation, including reports and other information filed by the company with the Securities and Exchange Commission, is available at http://www.applera.com, or by telephoning 800.762.6923. Information about Applied Biosystems is available at www.appliedbiosystems.com.

Applied Biosystems Forward Looking Statements

Certain statements in this press release are forward-looking. These may be identified by the use of forward-looking words or phrases such as "plan," "expect," and "should," among others. These forward-looking statements are based on Applera Corporation's current expectations. The Private Securities Litigation Reform Act The Private Securities Litigation Reform Act of 1995 (PSLRA) implemented several significant substantive changes affecting certain cases brought under the federal securities laws, including changes related to pleading, discovery, liability, class representation and awards fees and  of 1995 provides a "safe harbor Safe Harbor

1. A legal provision to reduce or eliminate liability as long as good faith is demonstrated.

2. A form of shark repellent implemented by a target company acquiring a business that is so poorly regulated that the target itself is less attractive.
" for such forward-looking statements. In order to comply with the terms of the safe harbor, Applera Corporation notes that a variety of factors could cause actual results and experience to differ materially from the anticipated results or other expectations expressed in such forward-looking statements. These factors include but are not limited to (1) rapidly changing technology and dependence on the development and customer acceptance of new products; (2) sales dependent on customers' capital spending capital spending

Spending for long-term assets such as factories, equipment, machinery, and buildings that permits the production of more goods and services in future years.
 policies and government-sponsored research; (3) Applied Biosystems' dependence on the operation of computer hardware, software, and Internet applications and related technology; (4) unproven use of genomics information to develop or commercialize products; and (5) other factors that might be described from time to time in Applera Corporation's filings with the Securities and Exchange Commission. All information in this press release is as of the date of the release, and Applera does not undertake any duty to update this information, including any forward-looking statements, unless required by law.

For Research Use Only. Not for use in diagnostic procedures.

The PCR process and the 5' nuclease process are covered by patents owned by Roche Molecular Systems, Inc. and F. Hoffmann-La Roche Ltd.

Copyright(C) 2005. Applera Corporation. All rights reserved. Applied Biosystems and Celera are registered trademarks and Applera is a trademark of Applera Corporation or its subsidiaries in the U.S. and/or certain other countries. TaqMan is a registered trademark of Roche Molecular systems, Inc.
COPYRIGHT 2005 Business Wire
No portion of this article can be reproduced without the express written permission from the copyright holder.
Copyright 2005, Gale Group. All rights reserved. Gale Group is a Thomson Corporation Company.

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Geographic Code:1USA
Date:Jun 23, 2005
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