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Mycobacterium tuberculosis Beijing genotype, the Netherlands.


To determine whether the Beijing genotype genotype (jēn`ətīp'): see genetics.
genotype

Genetic makeup of an organism. The genotype determines the hereditary potentials and limitations of an individual.
 of Mycobacterium tuberculosis Mycobacterium tuberculosis
n.
Tubercic bacillus.


Mycobacterium tuberculosis
 is emerging in the Netherlands, we collected data on 6,829 patients during 1993 to 2000. Six percent had the Beijing genotype. This genotype was associated with diagnosis in recent years, young age, nationality, and multidrug resistance multidrug resistance,
n the adaptation of tumor cells or infectious agents to resist chemotherapeutic agents.
.

**********

The Beijing genotype is found frequently in Asia (1-3) but also in outbreaks of multidrug-resistant tuberculosis (MDRTB) in various parts of the world, including Cuba, Germany, Russia, and Estonia (4-7). The largest known epidemic of MDRTB in North America North America, third largest continent (1990 est. pop. 365,000,000), c.9,400,000 sq mi (24,346,000 sq km), the northern of the two continents of the Western Hemisphere.  was caused by the W strain, a variant of the Beijing genotype (8 9). A recent study showed this strain's emergence and association with drug resistance in Vietnam (10). The Beijing genotype was also responsible for a recent outbreak of tuberculosis (TB) on the Canary Islands Canary Islands, Span. Islas Canarias, group of seven islands (1990 pop. 1,589,403), 2,808 sq mi (7,273 sq km), autonomous region of Spain, in the Atlantic Ocean off Western Sahara. They constitute two provinces of Spain. Santa Cruz de Tenerife (1990 pop.  (11).

The relatively high degree of genetic conservation of Beijing genotype strains found in a widespread area (12) suggests a recent dissemination and, hence, selective advantages associated with this genotype of Mycobacterium tuberculosis. Recently, Beijing genotype bacteria were reported to carry mutations in putative mutator A mutator may refer to:
  • In computer science:
  • A mutator method is an object method that changes the state of the object
 genes, which may explain a higher adaptability of these bacteria under stress conditions such as exposure to the intracellular environment or anti-TB drugs (13). These mutations may also be the basis of differential interaction between Beijing genotype bacteria and the host immune defense system suggested in a recent study in Indonesia (14).

In the Netherlands, MDRTB is affecting <1% of new TB patients, in particular immigrants (15-17). The incidence of the Beijing genotype has not yet been described. The goal of our study was to determine whether the Beijing genotype is emerging in the Netherlands and whether this genotype is associated with multidrug resistance.

The Study

Patient data were obtained from the Netherlands Tuberculosis Register, which is maintained by the Royal Netherlands Tuberculosis Association and has been in place since 1993. Municipal health services health services Managed care The benefits covered under a health contract , which are responsible for the followup of all TB patients, send information using standardized, precoded forms on all reported TB cases to the register. The register includes information on demographic characteristics, case detection, risk groups, type of disease, treatment, and treatment outcome.

Isolates obtained from all 8,210 culture-positive patients underwent restriction fragment length polymorphism restriction fragment length polymorphism
n. Abbr. RFLP
Intraspecies variations in the length of DNA fragments generated by the action of restriction enzymes and caused by mutations that alter the sites at which these enzymes act, changing
 (RFLP RFLP
abbr.
restriction fragment length polymorphism



RFLP

restriction fragment length polymorphism.

RFLP 
)-typing with IS6110 as a probe at the National Institute of Public Health and the Environment. The Beijing genotype was defined on the basis of spoligotype (no spacers 1-34; at least 4 of spacers 35-43) and a specific region A insertion (18). Certain IS6110 RFLP-genotype families (clades 47 and 61) were consistently found to be Beijing genotype (18). Isolates were assigned to the Beijing genotype on the basis of the IS6110 RFLP pattern (18). If any doubt about clade clade Cladus, subtype Genetics A branch of biological taxa or species that share features inherited from a common ancestor; a single phylogenetic group or line. See Inheritance, Species.  membership existed, we used spoligotyping for the final allocation.

The RFLP results for the period 1993-2000 were matched to patient data on the basis of date of birth, postal area code, and sex, resulting in a perfect match for 5,994 (73%) patients and a near-perfect match for 835 (10%) patients; overall, 83% of the samples matched (6,829 patients). During this period, the Beijing genotype was observed in 516 cultures, representing 6% of the 8,210 patients. In the matched dataset, 415 (6%) of 6,829 were of the Beijing genotype. The number of TB cases attributable to the Beijing genotype tended to increase over time (Figure; p>0.05). This tendency was observed both among Dutch patients (r-0.66, 95% confidence interval confidence interval,
n a statistical device used to determine the range within which an acceptable datum would fall. Confidence intervals are usually expressed in percentages, typically 95% or 99%.
 [CI]-0.08 to 0.93) and non-Dutch patients (r=0.59, 95% CI-0.20 to 0.91) (Figure). While the increase in the number of cases among immigrants may be associated with an overall increase of immigrants to the Netherlands during the study period, the increasing numbers among Dutch patients likely reflect an increasing incidence rate.

The proportion of TB patients who had the Beijing genotype was significantly associated in univariate analysis with a later year of diagnosis, young age, nationality (increased among immigrants from Asia and decreased among those from Morocco, Turkey, Somalia, and other African countries, compared with Dutch citizens), and multidrug resistance (Table). These associations persisted in multivariate analysis multivariate analysis,
n a statistical approach used to evaluate multiple variables.

multivariate analysis,
n a set of techniques used when variation in several variables has to be studied simultaneously.
 (Table).

The association between the proportion of TB cases with the Beijing genotype and age was observed in particular in Dutch patients ([chi square chi square (kī),
n a nonparametric statistic used with discrete data in the form of frequency count (nominal data) or percentages or proportions that can be reduced to frequencies.
.sub.trend] 15.5; p<0.0001), and was not clear among non-Dutch patients ([chi square.sub.trend] 0.8; p>0.2). Among Dutch patients, the Beijing genotype was more commonly found in new cases (6%, 133/2,130)

than among retreated cases (4%, 18/498; p<0.05). Among non-Dutch patients, the Beijing genotype was slightly more common in retreated cases (8%, 19/229) than in new cases (6%, 204/3,218); however, this occurrence was not significant (p>0.2). The incidence pattern by person and time appears consistent with transmission of the Beijing genotype from immigrants to the Dutch population (19).

The proportion of TB cases with the Beijing genotype was not substantially associated with HIV HIV (Human Immunodeficiency Virus), either of two closely related retroviruses that invade T-helper lymphocytes and are responsible for AIDS. There are two types of HIV: HIV-1 and HIV-2. HIV-1 is responsible for the vast majority of AIDS in the United States.  infection, pulmonary localization Customizing software and documentation for a particular country. It includes the translation of menus and messages into the native spoken language as well as changes in the user interface to accommodate different alphabets and culture. See internationalization and l10n. , RFLP clustering, or duration of stay in the Netherlands (Table). The lack of association with RFLP-clustering suggests that the Beijing genotype is not spreading more quickly than other M. tuberculosis M. tuberculosis,
n the bacterium responsible for tuberculosis, generally a respiratory infection in man; nonrespiratory tuberculosis is considered an indicator disease for AIDS. See also tuberculosis.
 strains.

Of the nine patients with the Beijing genotype and multidrug resistance, four were from central and eastern Europe The term "Central and Eastern Europe" came into wide spread use, replacing "Eastern bloc", to describe former Communist countries in Europe, after the collapse of the Iron Curtain in 1989/90. , three from Asia, one from Africa, and one from the Netherlands. One of these nine patients was RFLP-clustered; the other patient in that RFLP cluster had been diagnosed previously and had isolated isoniazid isoniazid (ī'sōnī`əzĭd), drug used to treat tuberculosis. Also known as isonicotinic acid hydrazide, isoniazid is the most effective antituberculosis drug currently available.  resistance.

During 1993 to 2000 in the Netherlands, the Netherlands, The
 officially Kingdom of The Netherlands byname Holland

Country, northwestern Europe. Area: 16,034 sq mi (41,528 sq km). Population (2005 est.): 16,300,000. Capital: Amsterdam. Seat of government: The Hague. Most of the people are Dutch.
 Beijing genotype represented 6% of TB cases. The Beijing genotype was associated with recent diagnoses, young age (in particular among Dutch citizens), nationality (Eastern Europe Eastern Europe

The countries of eastern Europe, especially those that were allied with the USSR in the Warsaw Pact, which was established in 1955 and dissolved in 1991.
 and Asia), and multidrug resistance. Although the Beijing genotype was associated with multidrug resistance, the number of MDRTB cases was small. No secondary cases were observed with the Beijing genotype and MDRTB. Of the nine cases of MDRTB, only one case may have been caused by transmission within the Netherlands from a case-patient who had isoniazid resistance at the start of treatment and may have acquired rifampicin rifampicin /rif·am·pi·cin/ (rif´am-pi-sin) rifampin.

rifampin, rifampicin

a derivative of rifamycin; an antibacterial and antifungal agent used in the treatment of mycobacterial infections, actinomycosis and histoplasmosis.
 resistance during treatment. However, the spread of the Beijing genotype among young people suggests the possible emergence of multidrug resistance and emphasizes the need for continued surveillance.
Table. Risk factors for the Beijing genotype of Mycobacterium
tuberculosis, the Netherlands, 1993-2000

Risk factor                       Beijing genotype    Total    %

Y of diagnosis
1993                                     23             669     3
1994                                     41             941     4
1995                                     56             863     6
1996                                     50             946     5
1997                                     64             872     7
1998                                     58             804     7
1999                                     74             879     8
2000                                     49             855     6

Sex
Male                                    254           4,135     6
Female                                  161           2,694     6

Age group
<25                                     120           1,522     8
25-34                                   123           1,925     6
35-44                                    64           1,080     6
45-54                                    23             614     4
55-64                                    24             493     5
65-74                                    40             517     8
75+                                      21             678     3

Nationality
Netherlands                             160           2,825     6
Europe (central and eastern)             20             231     9
Turkey                                    3             339     1
Morocco                                  19             650     3
Somalia                                  21             957     2
Africa (other)                           28             594     5
Asia                                    140             786    18
Other                                    19             345     6
Unknown                                   5             102     5

RFLP clustering (a)
No                                      212           3,227     7
Yes, first case                          57           1,052     5
Yes, later case                         146           2,550     6

Localization
Pulmonary                               268           4,064     7
Extrapulmonary                          113           2,122     5
Pulmonary and extrapulmonary             34             643     5

Residing in Netherlands
<6 months                                46             641     7
6-11 mo                                  12             301     4
12 23 mo                                 28             358     8
2-4 y                                    53             767     7
[greater than or equal to] 5 y          122           1,710     7
Born in Netherlands                     117           2,437     5
No information                           37             615     6

Drug resistance
Susceptible                             332           5,910     6
H only                                   11             227     5
S only                                   34             358     9
Other patterns                           26             221    12
Multidrug-resistant                       9              53    17
Unknown                                   3              60     5

Multidrug resistance
Yes                                       9              53    17
No                                      406           6,776     6

HIV infection
Yes                                      14             294     5
No                                      401           6.535     6

                                                Odds ratio

                                             Adjusted (b) (95%
Risk factor                       Crude    confidence intervals)

Y of diagnosis
1993                              1.09     1.08 (1.03 to 1.13)
1994                                            (per year)
1995
1996
1997
1998
1999
2000

Sex
Male                              1
Female                            0.97

Age group
<25                               1                  1
25-34                             0.80     0.69 (0.53 to 0.91)
35-44                             0.74     0.60 (0.43 to 0.83)
45-54                             0.45     0.36 (0.23 to 0.57)
55-64                             0.60     0.55 (0.35 to 0.88)
65-74                             0.98     0.78 (0.52 to 1.15)
75+                               0.37     0.30 (0.18 to 0.50)

Nationality
Netherlands                       1                  1
Europe (central and eastern)      1.58     1.27 (0.77 to 2.09)
Turkey                            0.15     0.12 (0.04 to 0.38)
Morocco                           0.50     0.41 (0.25 to 0.68)
Somalia                           0.37     0.27 (0.17 to 0.44)
Africa (other)                    0.82     0.63 (0.41 to 0.96)
Asia                              3.61     3.01 (2.32 to 3.91)
Other                             0.97     0.86 (0.53 to 1.42)
Unknown                           0.86     0.73 (0.29 to 1.84)

RFLP clustering (a)
No                                1
Yes, first case                   0.81
Yes, later case                   0.86

Localization
Pulmonary                         1
Extrapulmonary                    0.80
Pulmonary and extrapulmonary      0.79

Residing in Netherlands
<6 months                         1
6-11 mo                           0.54
12 23 mo                          1.10
2-4 y                             0.96
[greater than or equal to] 5 y    0.99
Born in Netherlands               0.65
No information                    0.83

Drug resistance
Susceptible                       1
H only                            0.86
S only                            1.76
Other patterns                    2.24
Multidrug-resistant               3.44
Unknown                           0.88

Multidrug resistance
Yes                               3.21     2.64 (1.22 to 5.74)
No                                1                  1

HIV infection
Yes                               0.76
No                                1

(a) RFLP, restriction fragment length polymorphism.

(b) Adjusted for year of diagnosis, age, nationality, and multidrug
resistance.


Acknowledgments

We thank all municipal health services in the Netherlands for their contribution to the Netherlands Tuberculosis Register.

This study was performed within the framework of Concerted Action project QLK2-2000-00630 on Molecular Epidemiology molecular epidemiology Molecular medicine An evolving field that combines the tools of standard epidemiology–case studies, questionnaires and monitoring of exposure to external factors with the tools of molecular biology–eg, restriction endonucleases,  of Tuberculosis.

References

(1.) van Soolingen D, Qian L, de Haas de Haas as a surname can refer to:
  • Dirk de Haas(17th century), Dutch merchant
  • Jacob de Haas
  • John Philip De Haas (1735-1786), American soldier
  • William de Haas (1830-1880), Dutch-born American painter
 PE, Douglas JT, Traore H, Portaels F, et al. Predominance pre·dom·i·nance   also pre·dom·i·nan·cy
n.
The state or quality of being predominant; preponderance.

Noun 1. predominance - the state of being predominant over others
predomination, prepotency
 of a single genotype of Mycobacterium tuberculosis in countries of East Asia East Asia

A region of Asia coextensive with the Far East.



East Asian adj. & n.
. J Clin Microbiol 1995;33:3234-8.

(2.) Chan MY, Borgdorff M, Yip CW, de Haas PE, Wong WS, Kam KM, et el. Seventy percent of the Mycobacterium tuberculosis isolates in Hong Kong Hong Kong (hŏng kŏng), Mandarin Xianggang, special administrative region of China, formerly a British crown colony (2005 est. pop. 6,899,000), land area 422 sq mi (1,092 sq km), adjacent to Guangdong prov.  represent the Beijing genotype. Epidemiol Infect 2001;127:169-71.

(3.) Bifani PJ, Mathema B, Kurepina NE, Kreiswirth BN. Global dissemination of the Mycobacterium tuberculosis W-Beijing family strains. Trends Microbiol 2002; 10:45-52.

(4.) Diaz R, Kremer K, de Haas PE, Gomez RI, Marrero A, Valdivia JA, et el. Molecular epidemiology of tuberculosis in Cuba outside of Havana, July 1994-June 1995: utility of spoligotyping versus IS6110 restriction fragment length polymorphism. Int J Tuberc Lung Dis 1998;2:743-50.

(5.) Niemann S, Rusch-Gerdes S, Richter E. IS6110 fingerprinting of drug-resistant Mycobacterium tuberculosis strains isolated in Germany during 1995. J Clin Microbiol 1997;35:3015-20.

(6.) Marttila HJ, Soini H, Eerola E, Vyshevskaya E, Vyshnevskyi BI, Otten TF. A Ser315Thr substitution in katG is predominant in genetically heterogeneous multi-drug resistant Mycobacterium tuberculosis isolates originating from the St. Petersburg area in Russia. Antimicrobiol Agents Chemother 1998;42:2443-5.

(7.) Kruuner A, Hoffner SE, Sillastu H, Danilovits M, Levina K, Svenson SB, et al. Spread of drug-resistant pulmonary tuberculosis pulmonary tuberculosis
n.
Tuberculosis of the lungs.


pulmonary tuberculosis Infectious disease Infection by Mycobacterium tuberculosis
 in Estonia. J Clin Microbiol 2001;39:3339-45.

(8.) Bifani PJ, Plikaytis BB, Kapur V, Stockbauer K, Pan X, Lutfey ML. Origin and interstate spread of a New York City New York City: see New York, city.
New York City

City (pop., 2000: 8,008,278), southeastern New York, at the mouth of the Hudson River. The largest city in the U.S.
 multidrug-resistant Mycobacterium tuberculosis clone family. JAMA JAMA
abbr.
Journal of the American Medical Association
 1996;275:452-7.

(9.) Frieden TR, Sherman LF, Maw KL, Fujiwara PI, Crawford JT, Nivin B, et al. A multi-institutional outbreak of highly drug-resistant tuberculosis: epidemiology and clinical outcomes. JAMA 1996;276:1229-35.

(10.) Anh DD, Borgdorff MW, Van LN, Lan NT, van Gorkom T. Kremer K, et al. Mycobacterium tuberculosis Beijing genotype emerging in Vietnam. Emerg Infect Dis 2000;6:302-5.

(11.) Caminero JA, Penn M J, Campos-Herrero MI, Rodriguez JC, Garcia I Garcia I might refer to:
  • García I of Castile (d.995)
  • García I of León (d. 914)
  • García I of Pamplona (d. 870)
, Cabrera P, et al. Epidemiological evidence of the spread of a Mycobacterium tuberculosis strain of the Beijing genotype on Gran Canaria Gran Canaria is the third largest island of the Canary Islands, an archipelago located in the Atlantic Ocean 210 km from the northwest coast of Africa and belonging to Spain. It is located southeast of Tenerife and west of Fuerteventura.  Island. Am J Respir Crit Care Med 2001;164:1165-70.

(12.) Glynn JR, Whiteley J, Bifani PJ, Kremer K, van Soolingen D. Worldwide occurrence of Beijing/W strains of Mycobacterium tuberculosis: a systematic review. Emerg Infect Dis 2002;8:843-9.

(13.) Rad ME, Bifani P, Martin C, Kremer K, Samper S, Rauzier J, et al. Mutations in putative mutator genes of Mycobacterium tuberculosis strains of the W-Beijing family. Emerg Infect Dis 2003;7:838-45.

(14.) Van Crevel R, Nelwan RH, de Lenne W, Veeraga Y, van der Zanden AG, Amin Z, et al. Mycobacterium tuberculosis Beijing genotype strains associated with febrile febrile /feb·rile/ (feb´ril) pertaining to or characterized by fever.

feb·rile
adj.
Of, relating to, or characterized by fever; feverish.
 response to treatment. Emerg Infect Dis 2001;7:880-3.

(15.) Espinal MA, Laszlo A, Simonsen L, Boulahbal F, Kim SJ, Reniero A, et al. Global trends in resistance to antituberculosis drugs Antituberculosis Drugs Definition

Antituberculosis drugs are medicines used to treat tuberculosis, an infectious disease that can affect the lungs and other organs.
. World Health Organization--International Union against Tuberculosis and Lung Disease lung disease Pulmonary disease Pulmonology Any condition causing or indicating impaired lung function Types of LD Obstructive lung disease–↓ in air flow caused by a narrowing or blockage of airways–eg, asthma, emphysema, chronic bronchitis;  Working Group on Anti-Tuberculosis Drug Resistance Surveillance. N Engl J Med 2001;344:1294-303.

(16.) Lambregts-van Weezenbeek CS, Jansen HM, Nagelkerke NJ, van Klingeren B, Veen J. Nationwide surveillance of drug-resistant tuberculosis in the Netherlands: rates, risk factors and treatment outcome. Int J Tuberc Lung Dis 1998;2:288-95.

(17.) Lambregts-van Weezenbeek CS, Jansen HM, Veen J, Nagelkerke NJ, Sebek MM, van Soolingen D. Origin and management of primary and acquired drug-resistant tuberculosis in the Netherlands: the truth behind the rates, Int J Tuberc Lung Dis 1998;2:296-302.

(18.) Kremer K, van den Brandt A, Kurepina NE, Glynn J, Bifani PJ, van Soolingen D. Definition of the Mycobacterium tuberculosis Beijing genotype. European Union European Union (EU), name given since the ratification (Nov., 1993) of the Treaty of European Union, or Maastricht Treaty, to the

European Community
 Concerted Action project meeting, Cascais, May 27-30, 2002. Abstract 019.

(19.) Borgdorff MW, Nagelkerke NJ, De Haas PE, Van Soolingen D. Transmission of tuberculosis depending on the age and sex of source cases. Am J Epidemiol 2001;154:934-43.

Martien W. Borgdorff, * Petra de Haas, ([double dagger double dagger
n.
A reference mark () used in printing and writing. Also called diesis.

Noun 1.
]) Kristin Kremer, ([double dagger]) and Dick van Soolingen ([double dagger])

* Royal Netherlands Tuberculosis Association, the Hague, the Hague, The (hāg), Du. 's Gravenhage or Den Haag, Fr. La Haye, city (1994 pop. 445,279), administrative and governmental seat of the Kingdom of the Netherlands, capital of South Holland prov., W Netherlands, on the North Sea.  Netherlands; ([dagger]) University of Amsterdam, Amsterdam, the Netherlands; and ([double dagger]) National Institute of Public Health and the Environment (RIVM RIVM Rijksinstituut voor Volksgezondheid en Milieu ), the Hague, the Netherlands

Dr. Borgdorff is the chief epidemiologist of the Royal Netherlands Tuberculosis Association (KNCV KNCV Koninklijke Nederlandse Chemische Vereniging (Royal Dutch Chemical Association)
KNCV Koninklijke Nederlandse Centrale Vereniging tot bestrijding der Tuberculose (Dutch Tuberculosis Foundation) 
) and professor of international health with special reference to tuberculosis at the University of Amsterdam. His areas of interest include the molecular epidemiology of tuberculosis and other communicable diseases communicable diseases, illnesses caused by microorganisms and transmitted from an infected person or animal to another person or animal. Some diseases are passed on by direct or indirect contact with infected persons or with their excretions. .

Address for correspondence: M.W. Borgdorff, Royal Netherlands Tuberculosis Association (KNCV), RO. Box 146, 2501 CC the Hague, the Netherlands; fax: +31 70 3584004; email: borgdorffm@kncvtbc.nl
COPYRIGHT 2003 U.S. National Center for Infectious Diseases
No portion of this article can be reproduced without the express written permission from the copyright holder.
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Title Annotation:Dispatches
Author:van Soolingen, Dick
Publication:Emerging Infectious Diseases
Geographic Code:4EUNE
Date:Oct 1, 2003
Words:2437
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