Multidrug-resistant strains of Salmonella enterica Typhimurium, United States, 1997-1998 (1).To evaluate multidrug-resistant strains of Salmonella enterica Salmonella enterica is a rod shaped, flagellated, Gram-negative bacterium, and a member of the genus Salmonella.[1] Serovars S. enterica has an extraordinarily large number of serovars serotype serotype /se·ro·type/ (ser´o-tip) the type of a microorganism determined by its constituent antigens; a taxonomic subdivision based thereon. se·ro·type n. See serovar. v. Typhimurium, including definitive type 104 (DT104) in the United States United States, officially United States of America, republic (2005 est. pop. 295,734,000), 3,539,227 sq mi (9,166,598 sq km), North America. The United States is the world's third largest country in population and the fourth largest country in area. , we reviewed data from the National Antimicrobial antimicrobial /an·ti·mi·cro·bi·al/ (-mi-kro´be-al) 1. killing microorganisms or suppressing their multiplication or growth. 2. an agent with such effects. Resistance Monitoring System (NARMS NARMS National Antimicrobial Resistance Monitoring System NARMS National Association of Rug Makers and Sculptors ). In 1997 to 1998, 703 (25%) of 2,767 serotyped Salmonella isolates received at NARMS were S. Typhimurium; antimicrobial susceptibility testing susceptibility test Antimicrobial susceptibility test, see there and phage phage: see bacteriophage. phage - A program that modifies other programs or databases in unauthorised ways; especially one that propagates a virus or Trojan horse. See also worm, mockingbird. The analogy, of course, is with phage viruses in biology. typing were completed for 697. Fifty-eight percent (402) were resistant to [greater than or equal to] 1 antimicrobial agent. Three multidrug-resistant ([greater than or equal to] 5 drugs) strains accounted for (74%) 296 of all resistant isolates. Ceftriaxone ceftriaxone /cef·tri·ax·one/ (cef?tri-ak´son) a semisynthetic, ß–resistant, third-generation cephalosporin effective against a wide range of gram-positive and gram-negative bacteria, used as the sodium salt. resistance was present in 8 (3%), and nalidixic acid nalidixic acid /nal·i·dix·ic ac·id/ (nal-i-dik´sik) a synthetic antibacterial agent used in the treatment of genitourinary infections caused by gram-negative organisms. na·li·dix·ic acid n. resistance in 4 (1%), of these multidrug-resistant strains. By phage typing, 259 (37%) of S. Typhimurium isolates were DT104, 209 (30%) were of undefined type and 103 (15%) were untypable. Fifty percent (202) of resistant ([greater than or equal to] 1 drug) isolates were DT104. Multidrug-resistant S. Typhimurium isolates, particularly DT104, account for a substantial proportion of S. Typhimurium isolates; ceftriaxone resistance is exhibited by some of these strains. ********** Salmonella enterica serotype Typhimurium is the most common Salmonella serotype in the United States, accounting for 29% of the approximately 30,000 laboratory-confirmed Salmonella infections reported annually to the Centers for Disease Control and Prevention Centers for Disease Control and Prevention (CDC), agency of the U.S. Public Health Service since 1973, with headquarters in Atlanta; it was established in 1946 as the Communicable Disease Center. (CDC See Control Data, century date change and Back Orifice. CDC - Control Data Corporation ) from 1968 to 1998 (1). Among Salmonella serotypes, Typhimurium exhibits one of the highest prevalences of antimicrobial resistance (2,3). Of particular concern is a multidrug-resistant strain of S. Typhimurium defined by phage typing as definitive type 104 (DT104). Multidrug-resistant DT104 was first detected in the United Kingdom in 1984 and was first isolated in the United States in 1985 (4,5). In addition to the phage reactions, this strain is characterized by its multiple antimicrobial-resistance pattern to ampicillin ampicillin (ăm'pĭsĭl`ĭn), a penicillin-type antibiotic that is effective against both gram-negative microorganisms and gram-positive microorganisms such as Escherichia coli. , chloramphenicol chloramphenicol (klōr'ămfĕn`əkŏl'), antibiotic effective against a wide range of gram-negative and gram-positive bacteria (see Gram's stain). It was originally isolated from a species of Streptomyces bacteria. , streptomycin streptomycin (strĕp'tōmī`sĭn), antibiotic produced by soil bacteria of the genus Streptomyces and active against both gram-positive and gram-negative bacteria (see Gram's stain), including species resistant to other , sulfamethoxazole sulfamethoxazole /sul·fa·meth·ox·a·zole/ (-meth-ok´sah-zol) a sulfonamideantibacterial and antiprotozoal, particularly used in acute urinary tract infections. sul·fa·me·thox·a·zole n. , and tetracycline tetracycline (tĕ'trəsī`klēn), any of a group of antibiotics produced by bacteria of the genus Streptomyces. They are effective against a wide range of Gram positive and Gram negative bacteria, interfering with protein (R-type ACSSuT). The number of reported human isolates of DT104 R-type ACSSuT in the United Kingdom increased from 259 isolates in 1990 to 4,006 isolates in 1996 (6). In the United States, antimicrobial susceptibility testing determined that the proportion of S. Typhimurium isolates that were R-type ACSSuT increased from <1% in 1980 to 34% in 1996 (7). Although phage typing of S. Typhimurium isolates is not routinely done in the United States, 93% of the R-type ACSSuT isolates tested from a national sample of isolates from all state and public health laboratories conducted in 1995 were DT104, which suggests that 9% of all human Salmonella infections in this country in 1995 were caused by S. Typhimurium DT104 R-type ACSSuT (5,7). The objectives of this analysis were to determine the antimicrobial-resistance patterns seen among S. Typhimurium isolates received at CDC through the National Antimicrobial Resistance Monitoring System (NARMS) from 1997 through 1998 and describe the distribution of phage types, including DT104, among S. Typhimurium isolates with the most common resistance patterns. Methods In 1996, NARMS was established to prospectively monitor the patterns of antimicrobial-drug resistance among human enteric enteric /en·ter·ic/ (en-ter´ik) within or pertaining to the small intestine. en·ter·ic adj. 1. Of, relating to, or within the intestine. 2. pathogens, including nontyphoidal Salmonella isolates received at select public health laboratories in the United States (8). NARMS began as collaboration between CDC, the U.S. Food and Drug Administration Center for Veterinary Medicine Center for Veterinary Medicine regulates the manufacture and distribution of food additives and drugs that will be given to animals. These include animals from which human foods are derived, as well as food additives and drugs for pet (or companion) animals. , and 12 state health departments (California, Colorado, Connecticut, Florida, Georgia, Kansas, Massachusetts, Minnesota, New Jersey, Oregon, Washington, and West Virginia West Virginia, E central state of the United States. It is bordered by Pennsylvania and Maryland (N), Virginia (E and S), and Kentucky and, across the Ohio R., Ohio (W). Facts and Figures Area, 24,181 sq mi (62,629 sq km). Pop. ) and two local health departments (Los Angeles Los Angeles (lôs ăn`jələs, lŏs, ăn`jəlēz'), city (1990 pop. 3,485,398), seat of Los Angeles co., S Calif.; inc. 1850. County and New York City New York City: see New York, city. New York City City (pop., 2000: 8,008,278), southeastern New York, at the mouth of the Hudson River. The largest city in the U.S. ). Two additional state health departments (Maryland and New York New York, state, United States New York, Middle Atlantic state of the United States. It is bordered by Vermont, Massachusetts, Connecticut, and the Atlantic Ocean (E), New Jersey and Pennsylvania (S), Lakes Erie and Ontario and the Canadian province of )joined NARMS in 1997. According to according to prep. 1. As stated or indicated by; on the authority of: according to historians. 2. In keeping with: according to instructions. 3. 1998 U.S. postcensus estimates (available from http://www.census.gov/population/estimates/state), the population served by these 16 state and local health departments was approximately 97 million persons, 37% of the U.S. population. From 1997 through 1998, NARMS-participating public health laboratories forwarded every 10th nontyphoidal Salmonella isolate serotyped at their laboratory to CDC for susceptibility testing. At CDC, partial range MICs were determined by using broth broth liquid media for culturing microorganisms. cooked meat broth a medium useful for culturing anaerobic bacteria. enrichment broth one modified to permit growth by selected bacteria. microdilution (Sensititre, Trek Diagnostics, Westlake, OH) for 16 antimicrobial agents Antimicrobial agents Chemical compounds biosynthetically or synthetically produced which either destroy or usefully suppress the growth or metabolism of a variety of microscopic or submicroscopic forms of life. : amikacin, amoxicillin-clavulanie acid (CI), ampicillin (A), apramycin (Ap), ceftiofur (a third-generation cephalosporin cephalosporin (sĕf'əlōspôr`ĭn), any of a group of more than 20 antibiotics derived from species of fungi of the genus Cephalosporium and closely related chemically to penicillin. Cephalosporins, e.g. used in veterinary medicine veterinary medicine, diagnosis and treatment of diseases of animals. An early interest in animal diseases is found in ancient Greek writings on medicine. Veterinary medicine began to achieve the stature of a science with the organization of the first school in the ) (Cef), ceftriaxone (Cx), cephalothin cephalothin a first generation cephalosporin antibiotic. Sensitive organisms include many penicillin-resistant staphylococci. cephalothin Cefalotin® Infectious disease A parenteral semisynthetic derivative of cephalosporin C, and 3 (Cep), chloramphenicol (C), ciprofloxacin ciprofloxacin /cip·ro·flox·a·cin/ (sip?ro-flok´sah-sin) a synthetic antibacterial effective against many gram-positive and gram-negative bacteria; used as the hydrochloride salt. cip·ro·flox·a·cin n. , gentamicin gentamicin /gen·ta·mi·cin/ (jen?tah-mi´sin) an aminoglycoside antibiotic complex isolated from bacteria of the genus Micromonospora, (G), kanamycin kanamycin /kan·a·my·cin/ (kan?ah-mi´sin) an aminoglycoside antibiotic derived from Streptomyces kanamyceticus, effective against aerobic gram-negative bacilli and some gram-positive bacteria, including mycobacteria; used as the (K), nalidixic acid (N), streptomycin (S), sulfamethoxazole (Su), tetracycline (T), and trimethoprim-sulfamethoxazole (Tm) (NARMS 1997, 1998 Annual Reports; available from http://www.cdc.gov/narms). National Committee for Clinical Laboratory Standards (NCCLS NCCLS National Committee for Clinical Laboratory Standards ) interpretive criteria were used when available (9); resistance to ceftiofur, apramycin, and streptomycin was defined as an MIC [greater than or equal to] 8 [micro]g/mL, [greater than or equal to] 32 [micro]g/mL, mad [greater than or equal to] 64 [micro]g/mL, respectively. Isolates that exhibited decreased susceptibility to third-generation cephalosporins Cephalosporins Definition Cephalosporins are medicines that kill bacteria or prevent their growth. Purpose Cephalosporins are used to treat infections in different parts of the body—the ears, nose, throat, lungs, sinuses, and (ceftiofur or ceftriaxone) were confirmed as Salmonella and tested for the full range of MICs for ceftriaxone by broth microdilution using NCCLS standards and by further molecular characterization (10,11). All isolates with intermediate susceptibilities were categorized cat·e·go·rize tr.v. cat·e·go·rized, cat·e·go·riz·ing, cat·e·go·riz·es To put into a category or categories; classify. cat as susceptible for this analysis with the understanding that an intermediate susceptibility to some drugs, in particular, ceftriaxone, would remove this drug as a clinical option. Phage types were determined by using a scheme of 31 S. Typhimurium typing phages based on the method of Anderson et al. (12) and the interpretive guide supplied by the Public Health Laboratory Service (PHLS PHLS Public Health Laboratory Service PHLS Portable Helicopter Lighting Set ) in Colindale, United Kingdom. At the time this set of S. Typhimurium isolates was tested, additional S. Typhimurium typing phages 1, 2, 3, and 18 (which would have enabled designation of definitive types 193, 194, 195, and 208) were not used. S. Typhimurium isolates phage typed as definitive type 104, 104a, 104b, 104c, or U302 (closely related definitive types) were classified together as DT104 complex (hereafter In the future. The term hereafter is always used to indicate a future time—to the exclusion of both the past and present—in legal documents, statutes, and other similar papers. referred to as DT104). Those S. Typhimurium isolates that reacted to phages but did not conform to Verb 1. conform to - satisfy a condition or restriction; "Does this paper meet the requirements for the degree?" fit, meet coordinate - be co-ordinated; "These activities coordinate well" any defined pattern were classified as RDNC RDNC Resource Discovery Network Centre (UK) (reacts but does not conform), and those that did not react with any of the typing phages used at the time were classified as untypable. Isolates that did not have antimicrobial susceptibility test results or phage type results were excluded from analysis. Invasive isolates were classified as those isolated from specimens collected from normally sterile sites, such as blood or cerebral spinal fluid spinal fluid n. See cerebrospinal fluid. ; enteric isolates were those isolated from stool specimens or rectal swabs. Isolates from specimens collected from other (e.g., urine) or unknown sources were excluded from analysis by specimen source. Statistical analysis was performed with Epi Info Epi Info is a public domain statistical software for epidemiology developed by Centers for Disease Control and Prevention. Developed by the Centers for Disease Control and Prevention (CDC) in Atlanta, Georgia (USA), Epi Info has been in existence for over 20 years and is 6.04 (CDC, Atlanta, GA) and SAS (1) (SAS Institute Inc., Cary, NC, www.sas.com) A software company that specializes in data warehousing and decision support software based on the SAS System. Founded in 1976, SAS is one of the world's largest privately held software companies. See SAS System. 6.12 software (SAS Institute SAS Institute Inc., headquartered in Cary, North Carolina, USA, has been a major producer of software since it was founded in 1976 by Anthony Barr, James Goodnight, John Sall and Jane Helwig. Inc., Cary, NC). Statistical testing of differences in proportions was conducted using the chi-square test chi-square test: see statistics. ; p values <0.05 were considered significant. Results Resistance Testing A total of 2,767 serotyped nontyphoidal Salmonella isolates were received at CDC through NARM NARM National Association of Recording Merchandisers NARM North American Registry of Midwives NARM National Association of Reunion Managers NARM Navy Resource Model NARM North American Reciprocal Museums NARM North Alabama Railroad Museum, Inc S from 1997 through 1998; 1,301 in 1997 and 1,466 in 1998. Of these, 703 (25%) were Salmonella serotype Typhimurium (including serotype Typhimurium var. Copenhagen); 326 (25%) in 1997 and 377 (26%) in 1998. Antimicrobial susceptibility testing and phage typing was completed on 697 isolates. The antimicrobial agents to which S. Typhimurium isolates demonstrated the highest level of resistance were sulfamethoxazole (53%), streptomycin (51%), tetracycline (50%), ampicillin (48%), chloramphenicol (35%), kanamycin (16%), amoxicillin-clavulanic acid (5%), cephalothin (5%), gentamicin (4%), trimethoprim-sulfamethoxazole (4%), ceftiofur (2%), ceftriaxone (1%), and nalidixic acid (1%). No isolates were resistant to amikacin, apramycin, or ciprofloxacin. Overall, 402 (58%) S. Typhimurium isolates were resistant to [greater than or equal to] 1 antimicrobial agent tested, 379 (54%) were resistant to [greater than or equal to] 2 antimicrobial agents, and 312 (45%) were resistant to [greater than or equal to] 5 antimicrobial agents (Table 1). Three distinct multidrug-resistant patterns were found among the 312 isolates resistant to [greater than or equal to]_5 agents: 209 (67%) were resistant to ampicillin, chloramphenicol, streptomycin, sulfamethoxazolc and tetracycline (R-type ACSSuT), 26 (8%) were additionally resistant to kanamycin (R-type ACKSSuT) and 61 (20%) were resistant to ampicillin, kaoamycin, streptomycin, sulfamethoxazole, and tetracycline (R-type AKSSuT). The proportion of S. Typhimurium isolates that were R-type ACSSuT, R-type ACKSSuT, or R-type AKSSuT varied among the 16 NARMS sites. Among the 14 sites that submitted [greater than or equal to] 10 S. Typhimurium isolates, New York State had the highest proportion of isolates that were one of these phenotypes (64%), and Minnesota had the lowest (17%) (p < 0.001) (Table 2). S. Typhimurium R-type ACSSuT was found in all states, and the proportion of S. Typhimurium isolates that were R-type ACSSuT ranged from 4% in Minnesota to 64% in New York State (Table 2). S. Typhimurium R-type ACKSSuT isolates were not found in California, New York State, Oregon, or West Virginia. Salmonella Typhimurium Salmonella ty·phi·mu·ri·um n. A bacterium that causes food poisoning. R-type AKSSuT isolates were not found in New York State, Washington, or West Virginia, and among other sites ranged from 4% in Maryland and Colorado to 20% in Massachusetts (Table 2). Both R-type ACSSuT and R-type AKSSuT isolates were identified in all months of the 2-year surveillance period. In contrast, R-type ACKSSuT resistance was first noted in isolates collected during June 1997; from this point forward, R-type ACKSSuT isolates were found every month. For each year, the proportion of S. Typhimurium isolates that were R-type ACSSuT in the winter (January-March) was 45% (61/135), compared with 20% (41/201) in the summer (July September) (p < 0.001). The proportion of multidrug-resistant isolates that were R-type ACSSuT varied significantly by age (p < 0.01) for the 542 isolates for which patient's age was known. Those from patients 40-49 years of age had the highest proportion of R-type ACSSuT isolates (41%), and those 10-19 years of age had the lowest proportion (19%). R-type ACSSuT strains were significantly more likely to be isolated from a sterile site (p < 0.01) than from stool when compared with other R-types or with pansusceptible S. Typhimurium isolates. Nine percent (19/203) of R-type ACSSuT isolates were from blood compared with 3% (9/291) of pansusceptible isolates. This association was not seen with other R-types. Of the 209 S. Typhimurium R-type ACSSuT isolates, 15 (7%) were also resistant to amoxicillin-clavulanic acid, 4 (2%) were resistant to nalidixic acid, 3 (1%) were resistant to cephalothin, 2 (1%) were resistant to trimethoprim trimethoprim /tri·meth·o·prim/ (-meth´o-prim) an antibacterial closely related to pyrimethamine; almost always used in combination with a sulfonamide, primarily for the treatment of urinary tract infections. , 2 (1%) were resistant to gentamicin, 1 was resistant to ceftiofur, and 1 was resistant to ceftriaxone. Of 26 S. Typhimurium R-type ACKSSuT isolates, 10 (39%) were resistant to cephalothin, 6 (23%) were resistant to amoxicillin-clavulanic acid, 6 (23%) were resistant to ceftiofur, 6 (23%) were resistant to ceftriaxone, 5 (19%) were resistant to trimethoprim, and 3 (12%) were resistant to gentamicin. Of the 61 S. Typhimurium R-type AKSSuT isolates, 9 (15%) were resistant to cephalothin, 4 (7%) were resistant to gentamicin, 2 (3%) were resistant to amoxicillin-clavulanic acid, 1 was resistant to ceftiofur, 1 was resistant to ceftriaxone, and 1 was resistant to nalidixic acid (Table 1). Although no S. Typhimurium isolates were resistant to ciprofloxacin, two isolates had reduced susceptibility to ciprofloxacin (both had MIC = 0.250 [micro]g/mL), and both isolates were R-type ACSSuT. Twelve S. Typhimurium isolates had ceftriaxone MICs [greater than or equal to] 32 [micro]g/mL; 11 were resistant (MIC [greater than or equal to] 64 [micro]g/mL). Nine (82%) of the 11 ceftriaxone resistant isolates were from children [less than or equal to] 18 years of age; 7 were from children <6 years of age. As a group, these 11 isolates were among the most highly resistant seen, with 8 isolates (80%) resistant to >9 antimicrobial agents; 6 were R-type ACKSSuT, 1 was R-type ACSSuT, and 1 was R-type AKSSuT. Phage Testing Of the 697 S. Typhimurium phage typed, 259 (37%) were DT104, 209 (30%) were RDNC, 103 (15%) were untypable; 35 other phage types were identified at low frequency (<3% of total) among the remaining 126 S. Typhimurium isolates (Table 3). Among the 295 pansusceptible S. Typhimurium isolates, there were 37 different phage types; 144 (49%) were RDNC, 33 (11%) were DT104, 26 (9%) were untypable, 20 (7%) were DT46, 14 (5%) were DT10, and 10 (3%) were DT2 isolates. Among the 296 isolates that were R-type ACSSuT, ACKSSuT, or AKSSuT, seven different phage types were found; 202 (68%) were DT104, 54 (18%) were untypable, 17 (6%) were RDNC, 7 (2%) were DT12/12A, 6 (2%) were DT21, 6 (2%) were DT 110/110B, and 4 (1%) were DT120. All three of these multidrug-resistant S. Typhimurium isolates included some DT104 isolates; 179 (86%) of the 209 R-type ACSSuT isolates, 14 (54%) of the 26 R-type ACKSSuT isolates, and 9 (15%) of the 61 R-type AKSSuT isolates were DT104 (Figure). All four of the nalidixic acid resistant R-type ACSSuT isolates were DT 104. Two other prevalent phage categories among multidrug-resistant S. Typhimurium isolates were RDNC (and did not necessarily exhibit the same lysis lysis /ly·sis/ (li´sis) 1. destruction or decomposition, as of a cell or other substance, under influence of a specific agent. 2. mobilization of an organ by division of restraining adhesions. 3. pattern) and untypable. Six (3%) of the R-type ACSSuT isolates, one (4%) of the R-type ACKSSuT isolates, and 10 (3%) of the R-type AKSSuT isolates were RDNC. Six (3%) of the R-type ACSSuT isolates, 11 (42%) of the R-type ACKSSuT isolates, and 37 (61%) of the R-type AKSSuT isolates were untypable. Compared with other phage types, DT104 isolates were more likely to be R-type ACSSuT (86% vs. 3%; p < 0.01), and untypable isolates were more likely to be R-type AKSSuT (61% vs. 16%; p < 0.01). Discussion This comprehensive study of phage type and antimicrobial resistance among S. Typhimurium isolates in the United States confirms that multidrug resistance multidrug resistance, n the adaptation of tumor cells or infectious agents to resist chemotherapeutic agents. is common among S. Typhimurium isolates and that DT104 is the dominant phage type. We found that 42% of S. Typhimurium collected during 1997-1998 belonged to one of three multidrug-resistant phenotypes: R-type ACSSuT, R-type ACKSSuT, and R-type AKSSuT. Overall, 68% of these isolates belonging to one of the multidrug-resistant phenotypes were DT104, with the greatest proportion of DT104 among the R-type ACSSuT isolates (86%); taken together, 28% of all S. Typhimurium isolates were DT104 R-type ACSSuT. Since an estimated 1.4 million persons are infected with Salmonella each year in the United States (13), these data suggest that approximately 100,000 persons were infected annually with S. Typhimurium DT104 R-type ACSSuT in 1997 and 1998 in this country. This study also contributes to our understanding of the descriptive epidemiology descriptive epidemiology see descriptive epidemiology. of S. Typhimurium R-type ACSSuT. S. Typhimurium R-type ACSSuT isolates were found in all sites with the highest proportion from New York and the lowest from Minnesota. The proportion of S. Typhimurium isolates that were R-type ACSSuT increased during the winter and declined during the summer. S. Typhimurium R-type ACSSuT isolates were also most likely to be found in persons 40-49 years of age and least likely to be from those 10-19 years of age. S. Typhimurium R-type ACSSuT isolates were more likely to be isolated from sterile sites than were other multidrug-resistant or susceptible S. Typhimurium isolates. Further studies are needed to determine if S. Typhimurium R-type ACSSuT isolates are more invasive than other S. Typhimurium isolates. The other two predominant multidrug-resistant S. Typhimurium seen were R-type ACKSSuT and AKSSuT. Those isolates were largely RDNC or untypable by phage typing. At the time phage typing was done, additional typing phages 1, 2, 3 and 18 of the Colindale scheme were not used. These additional typing phages assist in defining what would otherwise be interpreted as untypable. The untypable categories described here could include isolates that would now be designated as DT193, 194, 195, or 208 if these additional typing phages were applied. Multidrug resistance has been described among DT193 and 208 isolates identified in other studies (14,15). DT193 and 208 represented 10.9% of the pentaresistant S. Typhimurium from animals submitted to the U. S. National Veterinary Services Laboratory in 1998 (15), and DT193 was also the most prevalent phage type among 155 multidrug-resistant S. Typhimurium tested in southern Italy between 1992 and 1997 (16). The number of phage-untypable isolates within ACKSSuT and AKSSuT resistance patterns raises the question of whether multidrug resistance is associated with untypability. Within R-type ACKSSuT, 42% of isolates were untypable and within R-type AKSSuT, 61% were untypable. Transformation of Salmonella enterica serotype Enteritidis (S. Enteritidis) with drug resistance plasmids resistance plasmid n. Any of the conjugative or nonconjugative plasmids carrying genes responsible for antibiotic or antibacterial drug resistance among bacteria. Also called resistance factor, R factor, R plasmid. has been documented to cause changes in phage type (17,18). Brown et al. (17) showed a shift of PT8 to 13a upon acquisition of IncX plasmid plasmid Genetic element not contained within a chromosome. It occurs in many bacterial strains. Plasmids are circular DNA molecules that replicate independently of the bacterial chromosome. They are not essential for the bacterium but may give it a selective advantage. pOG670, which confers resistance to ampicillin and kanamycin. Threlfall et al. (18) reduced susceptibility to phages within the S. Enteritidis typing set in several S. Enteritidis isolates, and in two cases produced untypable isolates by transforming isolates with an IncN plasmid that contained ampicillin and streptomycin resistance factors. Further work to explore the plasmid and prophage prophage /pro·phage/ (pro´faj) the latent stage of a phage in a lysogenic bacterium, in which the viral genome becomes inserted into a specific portion of the host chromosome and is duplicated in each cell generation. content of isolates from each resistance type, may clarify the importance of these extrachromosomal elements ex·tra·chro·mo·so·mal element n. See plasmid. in determinating resistance and phage type. The emergence of clinically important antimicrobial resistance is cause for concern. Occurrence of third-generation cephalosporin resistance among the multidrug-resistant subpopulation sub·pop·u·la·tion n. A part or subdivision of a population, especially one originating from some other population: microbial subpopulations. Noun 1. of S. Typhimurium isolates is notable. Third-generation cephalosporins (e.g., ceftriaxone) are important in treating invasive Salmonella infections, particularly in children (19). In fact, most isolates we describe with ceftriaxone resistance came from children [less than or equal to] 18 years of age. A plasmid-mediated blaCMY-2 mechanism has been described as the source for the expanded-spectrum [beta]-lactam resistance among Salmonella that includes ceftriax-one seen in recent years in the United States (10). The prevalence of blaCMY-2 has continued to increase among multidrug-resistant Salmonella, especially serotype Newport, in more recent years (20,21). Occurrence of nalidixie acid resistance among multidrug-resistant S. Typhimurium R-type ACSSuT DT104 is also notable. Fluoroquinolones are also important in treating invasive Salmonella infections, particularly in adults. Although no fluoroquinolone fluoroquinolone /flu·o·ro·quin·o·lone/ (-kwin´o-lon) any of a subgroup of fluorine-substituted quinolones, having a broader spectrum of activity than nalidixic acid. fluor·o·quin·o·lone n. resistant isolates were identified in this study, four R-type ACSSuT isolates were resistant to nalidixic acid; patients with nalidixic acid resistant Salmonella DT 104 R-type ACSSuT infections have failed treatment with fluoroquinolones (19). Resistance to multiple antimicrobial agents is common among S. Typhimurium. With continued selective pressure that is created by antimicrobial drug use in humans, agriculture, and particularly food animals, we can expect to see a continued high prevalence of multidrug resistance among S. Typhimurium. Identification and subtyping of S. Typhimurium isolates is essential for understanding and controlling multidrug-resistant S. Typhimurium infections. Phage typing provides a useful, although resource-intensive, subtyping tool for this common serotype, although isolates that are RDNC and untypeable need to be categorized into groups that reflect the circulating S. Typhimurium strains found in the United States. Continued surveillance of antimicrobial resistance and phage types among S. Typhimurium will monitor dissemination of multidrug-resistant strains and strains resistant to clinically important antimicrobial agents, including cephalosporins and fluoroquinolones. This work was supported in part by the Connecticut Emerging Infections Program and a Cooperative Agreement (U50/CCU111188-07) from the Centers for Disease Control and Prevention.
Table 1. R-type and phage type distribution among Salmonella
Typhimurium isolates, NARMS 1997-1998
All isolates,
R-type (a) N (%) DT104, N (%)
ACSSuT 187 (27) 160 (62)
ACSSuT+Cl 11 (1) 10 (4)
ACSSuT+G 2 (<1) 2 (<1)
ACSSuT+N 4 (<1) 4 (2)
ACSSuT+Tm 1 (<1) 0
ACSSuT+Cl+Cep 2 (<1) 1 (<1)
ACSSuT+Cl+Tm 1 (<1) 1 (<1)
ACSSuT+Cl+Cef+Cx+Cep 1 (<1) 1 (<I)
ACSSuT total 209 (30) 179 (69)
ACKSSUT 16 (2) 13 (5)
ACKSSuT+Cep+Tm 4 (<1) 0
ACKSSuT+Cl+Cef+Cx+Cep 3 (<1) 0
ACKSSuT+Cl+Cef+Cx+Cep+G 2 (<1) 1 (<1)
ACKSSuT+Cl+Cef+Cx+Cep+G+Tm 1 (<1) 0
ACKSSuT total 26 (4) 14 (5)
AKSSuT 51 (7) 5 (2)
AKSSuT+Cep 4 (<1) 1 (<1)
AKSSuT+G 1 (<1) 0
AKSSuT+Cl+Cep 1 (<1) 0
AKSSuT+Cep+G 2 (<1) 2 (<1)
AKSSuT+Cl+Cep+G 1 (<1) 1 (<1)
AKSSuT+Cef+Cx+Cep+N 1 (<1) 0
AKSSuT total 61 (9) 9 (4)
Pansusceptible 295 (42) 33 (13)
Resistant to 1 antimicrobial agent 23 (3) 5 (2)
Resistant to 2 antimicrobial agents 19 (3) 7 (3)
Resistant to 3 antimicrobial agents 21 (3) 4 (2)
Resistant to 4 antimicrobial agents 27 (4) 5 (2)
Resistant to 5 antimicrobial agents 6 (<1) 3 (1)
Resistant to 6 antimicrobial agents 4 (<1) 0
Resistant to 7 antimicrobial agents 5 (<1) 0
Resistant to 9 antimicrobial agents 1 (<1) 0
Total 697 (100) 259 (100)
Untypeable,
R-type (a) RDNC (b), N (%) N (%)
ACSSuT 6 (3) 6 (6)
ACSSuT+Cl 0 0
ACSSuT+G 0 0
ACSSuT+N 0 0
ACSSuT+Tm 0 0
ACSSuT+Cl+Cep 0 0
ACSSuT+Cl+Tm 0 0
ACSSuT+Cl+Cef+Cx+Cep 0 0
ACSSuT total 6 (3) 6 (6)
ACKSSUT 1 (<1) 2 (2)
ACKSSuT+Cep+Tm 0 4 (4)
ACKSSuT+Cl+Cef+Cx+Cep 0 3 (3)
ACKSSuT+Cl+Cef+Cx+Cep+G 0 1 (1)
ACKSSuT+Cl+Cef+Cx+Cep+G+Tm 0 1 (1)
ACKSSuT total 1 (<1) 11 (11)
AKSSuT 8 (4) 34 (33)
AKSSuT+Cep 1 (<1) 2 (2)
AKSSuT+G 1 (<1) 0
AKSSuT+Cl+Cep 0 0
AKSSuT+Cep+G 0 0
AKSSuT+Cl+Cep+G 0 0
AKSSuT+Cef+Cx+Cep+N 0 1 (1)
AKSSuT total 10 (5) 37 (36)
Pansusceptible 144 (69) 26 (25)
Resistant to 1 antimicrobial agent 11 (5) 3 (3)
Resistant to 2 antimicrobial agents 8 (4) 1 (1)
Resistant to 3 antimicrobial agents 10 (5) 4 (4)
Resistant to 4 antimicrobial agents 11 (5) 10 (10)
Resistant to 5 antimicrobial agents 2 (1) 1 (1)
Resistant to 6 antimicrobial agents 1 (<1) 0
Resistant to 7 antimicrobial agents 2 (1) 1 (1)
Resistant to 9 antimicrobial agents 0 1 (1)
Total 209 (100) 104 (100)
(a) NARMS, National Antimicrobial Resistance Monitoring System;
Cl, amoxicillin-clavulanic acid; A, ampicillin; Ceft, ceftiofur;
Cx, ceftriaxone; Cep, cephalothin; C, chloramphenicol; G, .gentamicin;
K, kanamycin; N, nalidixic acid; S, streptomycin; Su, sulfamethoxazole;
T, tetracycline; Tm, trimethoprim-sulfamethoxazole.
(b) Reacts bill does not conform.
Table 2. Salmonella Typhimurium isolates with ACSSuT, ACKSSuT, or
AKSSuT resistance patterns by site, NARMS 1997-1998
Site ACSSuT, N (%) ACKSSuT, N (%) AKSSuT, N (%)
California (b) 8 (32) 0 3 (12)
Colorado 16 (36) 2 (4) 2 (4)
Connecticut 15 (39) 1 (3) 4 (10)
Florida 4 (45) 1 (11) 1 (11)
Georgia 21 (26) 1 (1) 6 (8)
Kansas 2 (11) 2 (11) 1 (5)
Los Angeles (c) 15 (25) 3 (5) 7 (12)
Maryland 12 (44) 1 (4) 1 (4)
Massachusetts 21 (24) 3 (3) 18 (21)
Minnesota 2 (4) 2 (4) 5 (9)
New Jersey 28 (32) 5 (6) 4 (5)
New York City (d) 10 (21) 2 (4) 7 (15)
New York State (e) 21 (64) 0 0
Oregon 8 (30) 0 2 (7)
Washington 25 (48) 3 (6) 0
West Virginia 1 (14) 0 0
Total 209 (30) 26 (4) 61 (9)
Other R-types, Pansusceptible,
Site N (%) N (%) Total N
California (b) 5 (20) 9 (36) 25
Colorado 8 (18) 17 (38) 45
Connecticut 6 (15) 13 (33) 39
Florida 0 3 (33) 9
Georgia 9 (11) 43 (54) 80
Kansas 5 (26) 9 (47) 19
Los Angeles (c) 18 (31) 16 (27) 59
Maryland 2 (7) 11 (41) 27
Massachusetts 9 (10) 37 (42) 88
Miimesota 12 (23) 32 (60) 53
New Jersey 11 (13) 38 (44) 86
New York City (d) 7 (15) 22 (45) 48
New York State (e) 2 (6) 10 (30) 33
Oregon 2 (7) 15 (56) 27
Washington 7 (13) 17 (33) 52
West Virginia 3 (43) 3 (43) 7
Total 106 (15) 295 (42) 697
(a) NARMS, National Antimicrobial Resistance Monitoring System.
(b) San Francisco and Alameda Counties.
(c) Los Angeles County.
(d) Five counties of New York City (Bronx, Kings, New York,
Queens, Richmond).
(e) Excluding New York City.
Table 3. Salmonella Typhimurium isolates by phage type, 1997-1998
Phage type N (%)
104 168 (24)
104A 24 (3)
104B 27 (4)
104C 4 (1)
U302 36 (5)
DT104 259 (37)
RDNC 209 (30)
Untypeable 103 (15)
1 6 (1)
2 14 (2)
4A 1 (<1)
9 1 (<1)
10 14 (2)
12/12A 10 (1)
21 6 (1)
22 2 (<1)
18 1 (<1)
36 1 (<1)
38 1 (<1)
40/40 VAR 3 (<1)
41/41A 3 (<1)
46 20 (3)
66 2 (<1)
69 2 (<1)
87 1 (<1)
105 1 (<1)
106 3 (<)
107 1 (<1)
110/110B 10 (2)
114 1 (<1)
120 6 (1)
124 2 (<1)
126 5 (<1)
156 3 (<1)
160 2 (<1)
164 1 (<1)
167 1 (<1)
170 1 (<1)
U291 1 (<1)
Total 697 (100)
Figure. Distribution of Salmonella Typhimurium phage types
among resistance patterns.
R-type ACSSuT
RDNC 3%
Untypable 3%
Others 1%
DT 104 85%
PT 110 3%
PT 120 2%
PT 12A 3%
R-type ACKSSuT
DT 104 54%
RDNC 4%
Untypable 42%
R-type AKSSuT
DT 104 15%
RDNC 16%
Untypable 61%
PT 21 8%
Note: Table made from pie chart.
References (1.) Centers for Disease Control and Prevention. An atlas of Salmonella in the United States. Serotype-specific surveillance 1968-1998. Atlanta: U.S. Department of Health and Human Services Noun 1. Department of Health and Human Services - the United States federal department that administers all federal programs dealing with health and welfare; created in 1979 Health and Human Services, HHS ; 2000. (2.) National Antimicrobial Resistance Monitoring System (NARMS): Enteric bacteria Noun 1. enteric bacteria - rod-shaped Gram-negative bacteria; most occur normally or pathogenically in intestines of humans and other animals enterics, enterobacteria, entric . 2000 Annual report. Atlanta: Centers for Disease Control and Prevention; 2001. (3.) Brisabois A, Cazin I, Breuil J, Collatz E. Surveillance of antibiotic resistance antibiotic resistance, n the ability of certain strains of microorganisms to develop resistance to antibiotics. antibiotic resistance in Salmonella. Eurosurveillance 1997;2:19-20. (4.) Threlfall EJ, Frost JA, Ward LR, Rowe B. Increasing spectrum of resistance in multiresistant Salmonella Typhimurium. Lancet 1996;347:1053-4. (5.) Ribot EM, Wierzba RK, Angulo FJ, Barrett TJ. Salmonella enterica serotype Typhimurium DT104 isolated from humans, United States, 1985, 1990, and 1995. Emerg Infect Dis 2002;8:387-91. (6.) Threlfall EJ, Ward LR, Skinner JA, Rowe B. Increase in multiple antibiotic resistance in nontyphoidal salmonellas from humans in England and Wales England and Wales are both constituent countries of the United Kingdom, that together share a single legal system: English law. Legislatively, England and Wales are treated as a single unit (see State (law)) for the conflict of laws. : a comparison of data for 1994 and 1996. Microb Drug Resist 1997;3:263-6. (7.) Glynn MK, Bopp C, Dewitt W, Dabney P, Mokhtar M, Angulo F. Emergence of multidrugresistant Salmonella enterica serotype Typhimurium DT 104 infectious in the United States. N Engl J Med 1998;338:1333-8. (8.) Establishment of a national surveillance program for antimicrobial resistance in Salmonella. MMWR MMWR Morbidity & Mortality Weekly Report Epidemiology A news bulletin published by the CDC, which provides epidemiologic data–eg, statistics on the incidence of AIDS, rabies, rubella, STDs and other communicable diseases, causes of mortality–eg, Morb Mortal Wkly Rep 1996;45:110-1. (9.) National Committee for Clinical Laboratory Standards. Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically. Approved standard M7-A4. Wayne (PA): National Committee for Clinical Laboratory Standards; 1997. (10.) Dunne EF, Fey P, Kludt P, Reporter R, Mostashari F, Shillam P, et al. Emergence of domestically acquired ceftriaxone-resistant Salmonella infections associated with AmpC [beta]-lactamase. JAMA JAMA abbr. Journal of the American Medical Association 2000 284:3151-6. (11.) Carattoli A, Tosini F, Giles WP, Rupp ME, Hinrichs SH, Angulo FJ, et al. Characterization of plasmids carrying CMY-2 from expanded-spectrum cephalosporin-resistant Salmonella strains isolated in the United States between 1996 and 1998. Antimicrob Agents Chemother 2002;46:1269-72. (12.) Anderson ES, Ward LR, Saxe MJ, de Sa JD. Bacteriophage-typing designations of Salmonella typhimurium. J Hyg (Lond) 1977;78:297-300. (13.) Mead PS, Slusker L, Dietz V, McCraig LF, Bresee JS, Shapiro C, et al. Food-related illness and death in the United States. Emerg Infect Dis 1999;5:607-25. (14.) Daly M, Fanning S. Characterization and chromosomal mapping of antimicrobial resistance genes in Salmonella enterica serotype Typhimurium. Appl Environ Microbiol 2000;66:4842-8. (15.) Frana T, Carlson S Carl·son , Chester Floyd 1906-1968. American inventor of the xerographic process for copying documents (first patented in 1940). , Griffith RW. Relative distribution and conservation of genes encoding See encode. aminoglycoside-modifying enzymes in ST phage type DT 104. Appl Environ Microbiol 2001;67:445-8. (16.) Nastasi A, Mammina C. Surveillance of multidrug-resistant strains of Salmonella enterica serotype Typhimurium in southern Italy in the years 1992-1997. Eur J Epidemiol 2000;16:135-9. (17.) Brown, DJ, Baggesen DL, Platt DJ, Olsen, JE. Phage type conversion in Salmonella enterica serotype Enteritidis caused by the introduction of a resistance plasmid of incompatibility group incompatibility group Molecular biology A number of different types of plasmid, often related to each other, that are unable to stably coexist in the same cell X (IncX). Epidemiol Infect 1999;122:19-22. (18.) Threlfall EJ. Chart H, Ward LR, de Sa JDH JDH Journal of Dental Hygiene JDH Jodhpur, India (Airport Code) JDH Joint Distribution Host , Rowe B. Interrelationships between strains of Salmonella enteritidis Salmonella en·ter·it·i·dis n. Gärtner's bacillus. belonging to phage types 4, 7, 7a, 8, 13, 13a, 23, 24, 30. J Appl Bacteriol 1993; 75:43-8. (19.) Molbak K, Baggesen DL, Aarestrup FM, Ebbesen JM, Enberg J, Frydendahl K, et al. An outbreak of multi-drug resistance, quinolone-resistant Salmonella enterica serotype Typhimurium DT104. N Engl J Med 1999;341:1420-5. (20.) Whichard J, Joyce K, Fey PD, McClellan J, Angulo F, Barrett T, et al. Extended spectrum beta-lactam resistance among human clinical Enterobacteriaceae in the United States: results and characterization of 2000 NARMS surveillance. In: Program and abstracts of the International Conference on Emerging Infectious Diseases The ICEID or International Conference on Emerging Infectious Diseases is a conference for public health professionals on the subject of emerging infectious diseases. (ICEID ICEID International Conference on Emerging Infectious Diseases ICEID International Commission of Inquiry on Darfur (UN Security Council) ), Atlanta, Georgia, 2002. Washington: American Society for Microbiology The American Society for Microbiology (ASM) is a scientific organization, based in the United States although with over 43,000 members throughout the world. It is the largest single life science professional organization and its members include those whose interests encompass basic ; 2002. (21.) Centers for Disease Control and Prevention. Outbreak of multidrug-resistant Salmonella Newport United States, January April 2002. MMWR Morb Mortal Wkly Rep 2002;51:545-8. Ms. Rabatsky-Ehr is an epidemiologist at the Connecticut Department of Public Health, Epidemiology and Emerging Infections Division. Her professional interests include infectious disease Infectious disease A pathological condition spread among biological species. Infectious diseases, although varied in their effects, are always associated with viruses, bacteria, fungi, protozoa, multicellular parasites and aberrant proteins known as prions. surveillance, molecular epidemiology molecular epidemiology Molecular medicine An evolving field that combines the tools of standard epidemiology–case studies, questionnaires and monitoring of exposure to external factors with the tools of molecular biology–eg, restriction endonucleases, , and antimicrobial resistance among bacterial pathogens. Address for correspondence: Therese Rabatsky-Ehr, Connecticut Department of Public Health, Epidemiology and Emerging Infections, 410 Capital Avenue, MS # Epi 11, P.O. Box 340308, Hartford, CT 06134, USA; fax:203-977-5882; email: Therese.Rabatsky-Ehr@po.state.ct.us Therese Rabatsky-Ehr, * Jean Whichard, ([dagger]) Shannon Rossiter, ([dagger]) Ben Holland, ([dagger]) Karen Stamey, ([dagger]) Marcia L. Headrick, ([double dagger double dagger n. A reference mark ( ) used in printing and writing. Also called diesis.Noun 1. ]) Timothy J. Barrett, ([dagger]) Frederick J. Angulo, ([dagger]) and the NARMS Working Group * Yale University Yale University, at New Haven, Conn.; coeducational. Chartered as a collegiate school for men in 1701 largely as a result of the efforts of James Pierpont, it opened at Killingworth (now Clinton) in 1702, moved (1707) to Saybrook (now Old Saybrook), and in 1716 was School of Medicine, New Haven New Haven, city (1990 pop. 130,474), New Haven co., S Conn., a port of entry where the Quinnipiac and other small rivers enter Long Island Sound; inc. 1784. Firearms and ammunition, clocks and watches, tools, rubber and paper products, and textiles are among the many , Connecticut, USA; ([dagger]) Centers for Disease Control and Prevention, Atlanta, Georgia, USA; and ([double dagger]) U.S. Food and Drug Administration, Bethesda, Maryland Bethesda is an urbanized, but unincorporated, area in southern Montgomery County, Maryland, just Northwest of Washington, D.C. It takes its name from a church located there, the Bethesda Presbyterian Church, built in 1820 and rebuilt in 1850, which in turn took its name from , USA (1) Presented in part at the International Conference on Emerging Infectious Diseases, July 2000, Atlanta, Georgia, USA. |
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