Lynx Announces Publication of Manuscript Describing ``Massive Attack on the Arabidopsis Transcriptome''.HAYWARD, Calif. -- MPSS MPSS Massively Parallel Signature Sequencing MPSS Methylprednisolone Sodium Succinate MPSS Multiple Page Size Support MPSS Ministry of Public Safety and Security (Canada) MPSS Mainz Pain Staging System Technology Maps New Gene Data on the Structure of a Higher Plant Species Lynx Therapeutics, Inc. (Nasdaq:LYNX) today announced the acceptance for publication of two peer-reviewed manuscripts that describe the use of Lynx's Massively Parallel See MPP. Signature Sequencing (MPSS(TM)) gene expression technology to document gene activity data for nearly every gene in the experimental plant species Arabidopsis thaliana Noun 1. Arabidopsis thaliana - a small invasive self-pollinating weed with small white flowers; much studied by plant geneticists; the first higher plant whose complete genome sequence was described mouse-ear cress . The data used in these manuscripts were generated through a National Science Foundation (NSF NSF - National Science Foundation )-sponsored project that further expands scientific knowledge about the genome sequence of this model plant. Arabidopsis thaliana is a small plant in the mustard family mustard family Family Brassicaceae (or Cruciferae), composed of 350 genera of mostly herbaceous plants with peppery-flavored leaves. The pungent seeds of some species lead the spice trade in volume traded. with one of the smallest genomes and the highest gene density so far identified in a flowering plant flowering plant Any of the more than 250,000 species of angiosperms (division Magnoliophyta) having roots, stems, leaves, and well-developed conductive tissues (xylem and phloem). . Decoding the DNA DNA: see nucleic acid. DNA or deoxyribonucleic acid One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes. of this model plant provides a complete catalog of all genes in the plant life cycle, from seed to flower and fruit. Researchers believe that what scientists learn from the study of Arabidopsis genes will be immediately applicable to economically important plant species. Thomas J. Vasicek, Ph.D., vice president of business development at Lynx, said, "In 2000, the plant biotechnology world reached a major milestone when the Arabidopsis genome was fully sequenced. A full understanding of how the genome sequence encodes all developmental programs and responds to environmental conditions is the next major challenge for every genome project genome project 1 The Human Genome Project, see there 2. A general term for a coordinated research initiative for mapping and sequencing the genome of any organism . This perspective requires complete functional knowledge of the genes and precise measurement of their activity in a range of contexts. Thus MPSS(TM) is critical in this quest since we believe it is the only technology that provides the total picture." The cover of the August 2004 issue of the journal Nature Biotechnology, one of the top scientific journals for biotechnology research, dubbed the paper a "Massive Attack on the Arabidopsis Transcriptome The transcriptome is the set of all messenger RNA (mRNA) molecules, or "transcripts", produced in one or a population of cells. The term can be applied to the total set of transcripts in a given organism, or to the specific subset of transcripts present in a particular cell type. ." The actual article, "The analysis of the transcriptional activity of Arabidopsis thaliana by massively parallel signature sequencing," provides details on research headed by Dr. Blake Meyers of the University of Delaware [3] The student body at the University of Delaware is largely an undergraduate population. Delaware students have a great deal of access to work and internship opportunities. , in conjunction with Lynx researchers, on the analysis of transcriptome data from Arabidopsis tissues. The article describes the complexity of transcripts produced from the Arabidopsis genome, using five MPSS(TM) libraries containing more than 12 million signature sequences (the current online database contains more than 36 million signature sequences from 14 tissues). The data from this NSF-sponsored project indicate that more than 18,000 genes are expressed among the five tissues. Additionally, this research resulted in the discovery of more than a 1,000 new genes, and demonstrated that alternative splicing and poly-adenylation are common and important features in plants. The research utilized MPSS(TM) instruments, which analyze millions of DNA molecules in parallel, providing comprehensive gene expression information with an unprecedented level of accuracy and sensitivity, according to Lynx scientists. They further noted that based on these data, researchers can classify genes according to their expression profile, deduce their physiological role and construct exhaustive lists of genes involved in specific functions. The second manuscript is scheduled to appear in the September 2004 journal Molecular Biology molecular biology, scientific study of the molecular basis of life processes, including cellular respiration, excretion, and reproduction. The term molecular biology was coined in 1938 by Warren Weaver, then director of the natural sciences program at the Rockefeller and Evolution. This paper, authored by members of the Institute of Cell, Animal & Population Biology (ICAPB ICAPB Institute of Cell, Animal and Population Biology ) at the University of Edinburgh (body, education) University of Edinburgh - A university in the centre of Scotland's capital. The University of Edinburgh has been promoting and setting standards in education for over 400 years. and co-authored by Dr. Meyers, describes the relationship between gene expression and molecular evolution in two closely related plant species Arabidopsis thaliana and Arabidopsis lyrata. The authors measured the correlation between the rate of protein evolution, gene expression, and the presence of particular transfer-RNAs in different tissues. "The addition of these two papers to the set already published by the NSF-sponsored project indicates the utility of these data and the importance of this publicly available information as a resource for the plant research community," added Dr. Vasicek. "This marks another significant response to the availability of these public MPSS(TM) expression data for a model plant. However, it is just the tip of the iceberg tip of the iceberg n. pl. tips of the iceberg A small evident part or aspect of something largely hidden: afraid that these few reported cases of the disease might only be the tip of the iceberg. . We expect the response to the mouse reference transcriptome to be substantially greater given the much larger size of the medical biotechnology community that uses the mouse as a model system." The Web site with the original data can be found at http://mpss.udel.edu/at. About University of Delaware Located in Newark, Delaware, the University of Delaware was founded in 1743 and is a state-assisted, privately controlled institution, with more than 16,000 undergraduates and nearly 3,000 graduate students. It is the major research university in Delaware. The Delaware Biotechnology Institute (DBI (DeciBel Isotropic) The measurement of gain in a directional antenna compared with a theoretical "isotropic antenna," which radiates the exact same energy in all directions. See isotropic and deciBel. ) is a statewide collaboration among universities, state government, and the private sector that houses faculty from diverse University of Delaware departments. It was founded to help establish Delaware as a center of excellence in biotechnology and the life sciences. About Lynx Lynx is a leader in the development and application of novel genomic analysis solutions. Lynx's MPSS(TM) instruments analyze millions of DNA molecules in parallel enabling genome structure characterization at an unprecedented level of resolution. As applied to gene expression analysis, MPSS(TM) provides comprehensive and quantitative digital information important to modern systems biology research in the pharmaceutical, biotechnology and agricultural industries. For more information, visit Lynx's Web site at www.lynxgen.com. This press release contains "forward-looking" statements, including statements related to the identification of differentially expressed genes, the potential success of collaboration arrangements, the addition of new collaborations and agreements and Lynx's performance of its genomics discovery services for current and future customers and collaborators. Any statements contained in this press release that are not statements of historical fact may be deemed to be forward-looking statements. Words such as "believes," "anticipates," "plans," "predicts," "expects," "envisions," "hopes," "estimates," "intends," "will," "continue," "may," "potential," "should," "confident," "could" and similar expressions are intended to identify forward-looking statements. There are a number of important factors that could cause the results of Lynx to differ materially from those indicated by these forward-looking statements, including, among others, risks detailed from time to time in Lynx's SEC reports, including its Annual Report on Form 10-K Form 10-K A report required by the SEC from exchange-listed companies that provides for annual disclosure of certain financial information. Form 10-K See 10-K. for the year ended December 31, 2003, as amended, and its Quarterly Report on Form 10-Q Form 10-Q See 10-Q. for the period ended June 30, 2004. Lynx does not undertake any obligation to update forward-looking statements. |
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