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Isolate removal methods and methicillin-resistant Staphylococcus aureus surveillance.


The effect of duplicate isolate removal strategies on Staphylococcal staphylococcal

pertaining to Staphylococcus spp.


staphylococcal clumping test
used as a means of measuring the quantity of fibrinogen-split products in a sample of blood.
 aureus The aureus (pl. aurei) was a gold coin of ancient Rome valued at 25 silver denarii. The aureus was regularly issued from the 1st century BC to the beginning of the 4th century AD, when it was replaced by the solidus.  susceptibility susceptibility

the state of being susceptible. Refers usually to infectious disease but may be to physical factors such as wetting or to psychological factors such as harassment.
 to oxacillin oxacillin /ox·a·cil·lin/ (ok?sah-sil´in) a semisynthetic penicillinase-resistant penicillin used as the sodium salt in infections due to penicillin-resistant, gram-positive organisms.  was compared by using antimicrobial antimicrobial /an·ti·mi·cro·bi·al/ (-mi-kro´be-al)
1. killing microorganisms or suppressing their multiplication or growth.

2. an agent with such effects.
 test results for 14,595 isolates from statewide surveillance in Hawaii in 2002. No removal was compared to most resistant and most susceptible methods at 365 days and to the National Committee for Clinical Laboratory Standards (NCCLS NCCLS National Committee for Clinical Laboratory Standards ) and Cerner algorithms at 3-, 10-, 30-, 90-, and 365-day analysis periods. Overall, no removal produced the lowest estimates of susceptibility. Estimates with either NCCLS or Cerner differed by <2% when the analysis period was the same; with either method, the difference observed between a 90- and a 365day period was <1%. The effect of duplicate isolate removal was greater for inpatient inpatient /in·pa·tient/ (in´pa-shent) a patient who comes to a hospital or other health care facility for diagnosis or treatment that requires an overnight stay.

in·pa·tient
n.
 than outpatient settings. Considering the ease of implementation and comparability of results, we recommend using the first isolate of a given species per patient to calculate susceptibility frequencies for S. aureus to oxacillin.

**********

Surveillance of antimicrobial susceptibility is critical for developing strategies to control increasing antimicrobial resistance. Aggregation of institutional antibiograms is commonly proposed as a useful means of monitoring antimicrobial resistance trends in a population (1-3). However, inconsistencies in the methods used to generate antibiogram susceptibility reports, particularly with regard to duplicate isolate removal, make comparing data from different facilities problematic (2,4-6).

To address this situation, in 2002, the National Committee for Clinical Laboratory Standards (NCCLS, currently known as the Clinical and Laboratory Standards Institute) recommended using antimicrobial test results from the first species isolate per patient, per period of data analysis, to calculate susceptibility frequencies (7). Other approaches currently in use include not removing any isolates, counting only the most susceptible or most resistant isolate from a patient per surveillance period, and applying the Cerner laboratory management system, a widely used software program (4).

Studies comparing the potential effect of using different methods for duplicate isolate removal are limited, i.e., most existing analyses are based on data from a single facility or compared only a few of the many different options for duplicate isolate removal (4-6). We evaluated the effects of 13 distinct duplicate isolate removal strategies on Staphylococcus aureus Staphylococcus au·re·us
n.
A bacterium that causes furunculosis, pyemia, osteomyelitis, suppuration of wounds, and food poisoning.


Staphylococcus aureus Staphylococcus pyogenes
 susceptibility to oxacillin by using antimicrobial susceptibility test susceptibility test Antimicrobial susceptibility test, see there  results from a statewide antimicrobial resistance surveillance system in Hawaii.

Methods and Materials

Data Collection

All available susceptibility data for S. aureus isolates identified in Hawaii in 2002 were collected retrospectively from the laboratory information systems of participating facilities and transferred to the State of Hawaii Antimicrobial Resistance Project (SHARP) database. The SHARP system consists of laboratory data from 2 large commercial clinical laboratories and most acute-care hospitals. The 2 commercial laboratories serve most of Hawaii's population (N = 1,211,537) by providing susceptibility testing services for >85% of all nonhospital outpatient settings in Hawaii and performing susceptibility testing for 18 of the 24 acute-care hospitals in the state (8,9). The remaining 6 acute-care hospitals each maintain their own laboratory to perform susceptibility testing for their respective facility. Susceptibility results from 3 of these hospitals were incorporated into the SHARP database, yielding a final dataset that encompasses 21 (88%) of Hawaii's 24 acute-care hospitals. A review of antibiograms produced by all laboratories in Hawaii in 2001 indicates that the data sources used in the current analysis capture >90% of all S. aureus identified in our state annually.

Laboratories participating in SHARP provide isolate-level data, including the specimen collection date, source (e.g., blood, urine, and cerebrospinal fluid cerebrospinal fluid (CSF)

Clear, colourless liquid that surrounds the brain and spinal cord and fills the spaces in them. It helps support the brain, acts as a lubricant, maintains pressure in the skull, and cushions shocks.
), susceptibility test methods (e.g., Kirby-Bauer), and susceptibility test results. Limited demographic patient information is also included in the record, e.g., date of birth and sex, but detailed clinical histories and patient names are not available. The susceptibility testing method used by all laboratories during the study period was the Vitek automatic system, supported by the Kirby-Bauer disk diffusion diffusion, in chemistry, the spontaneous migration of substances from regions where their concentration is high to regions where their concentration is low. Diffusion is important in many life processes.  method (10). NCCLS criteria were used to interpret inhibitory zone diameters and MIC. Determination of methicillin methicillin /meth·i·cil·lin/ (meth?i-sil´in) a semisynthetic penicillin highly resistant to inactivation by penicillinase; used as the sodium salt.

meth·i·cil·lin
n.
 susceptibility is based on oxacillin susceptibility testing. The breakpoint The location in a program used to temporarily halt the program for testing and debugging. Lines of code in a source program are marked for breakpoints. When those instructions are about to be executed, the program stops, allowing the programmer to examine the status of the program  for oxacillin resistance was MIC [greater than or equal to] 4 [micro]g/mL or a zone diameter [less than or equal to] 10 mm. The breakpoint for intermediate isolates was MIC 2-4 [micro]g/mL or zone diameter 11-12 mm. The breakpoint for susceptible isolates was MIC [less than or equal to] 2 [micro]g/mL or zone diameter [greater than or equal to] 13mm.

For this analysis, S. aureus isolates from inpatients in intensive care units (ICUs), other inpatient settings (non-ICU), and outpatient settings (e.g., physician offices, community health centers, hospital outpatients, and emergency departments) were included. Isolates from patients in longterm care homes and prisons were excluded.

Detection of Duplicate Isolates

Duplicate isolates were identified by using Microsoft Access A database program for Windows, available separately or included in the Microsoft Office suite. Access is programmable using Visual Basic for Applications (VBA). Access can read Paradox, dBASE and Btrieve files, and using ODBC, Microsoft SQL Server, SYBASE SQL Server and Oracle data.  (Microsoft Corp., Redmond, WA, USA) to sort susceptibility data based on the patient's unique medical record number (MRN MRN Motor Racing Network
MRN Medical Record Number
MRN Magnetic Resonance Neurography
MRN Medicare Remittance Notice
MRN Matières Radioactives Naturelles
MRN Meteorological Rocket Network
MRN Manufacturers Resource Network
), if available, or an assigned patient identifier (APID APID Association of Professional Interior Designers
APID Application Process Identifier
APID Application Identification
APID Application Program Interface Division/Definition
APID Anchor Point Identifier
APID Air Photographic Interpretation Detachment
). When an MRN was not available, the APID was created from the patient's date of birth, sex, reporting laboratory, and identity of the hospital facility or private physician who ordered the culture. The ability of the APID to uniquely identify patients was assessed by generating an APID for the subset A group of commands or functions that do not include all the capabilities of the original specification. Software or hardware components designed for the subset will also work with the original.  of patients who also had MRNs. The corresponding APID was found to be unique for 99% of the records with a unique MRN and assessed to be an acceptable surrogate surrogate n. 1) a person acting on behalf of another or a substitute, including a woman who gives birth to a baby of a mother who is unable to carry the child. 2) a judge in some states (notably New York) responsible only for probates, estates, and adoptions. . The potential effect of using the APID in lieu of Instead of; in place of; in substitution of. It does not mean in addition to.  the MRN was assessed in a subanalysis that compared the results for records containing an MRN to those from records identified with the APID.

Methods for Duplicate Isolate Removal

Antimicrobial susceptibility frequencies were calculated by using each of the 5 duplicate isolate removal methods described. For the "no removal" method, susceptibility results for all S. aureus isolates in the 2002 database were included in the estimation of the proportion of isolates. For the "most resistant" method, during a 365-day period, irrespective of irrespective of
prep.
Without consideration of; regardless of.

irrespective of
preposition despite 
 the number of positive cultures, each patient was counted only once. For any given patient, if a resistant isolate was identified, the first resistant isolate identified was included in the analysis, and all other results, susceptible or resistant, were censored cen·sor  
n.
1. A person authorized to examine books, films, or other material and to remove or suppress what is considered morally, politically, or otherwise objectionable.

2.
. If no resistant isolates were identified for a patient during the period, the first sensitive isolate was included in the analysis. For the "most susceptible" method, during a 365-day period, irrespective of the number of positive cultures, each patient was counted only once. For any given patient, if a susceptible isolate was identified, the first susceptible isolate identified was included in the analysis, and all other results, susceptible or resistant, were excluded. If no susceptible isolates were identified for a patient during the period, the first resistant isolate was included in the analysis. For the NCCLS method, the susceptibility results for the first S. aureus isolate per patient per analysis period, irrespective of body site, antimicrobial susceptibility profile, or other phenotypic phe·no·type  
n.
1.
a. The observable physical or biochemical characteristics of an organism, as determined by both genetic makeup and environmental influences.

b.
 characteristics (e.g., biotype biotype /bio·type/ (bi´o-tip)
1. a group of individuals having the same genotype.

2. any of a number of strains of a species of microorganisms having differentiable physiologic characteristics.
), were included in the analysis (7). We applied NCCLS criteria for 5 different surveillance periods: 3, 10, 30, 90, and 365 days. Finally, for the Cerner method, a duplicate isolate was defined as from the same patient, same species, and same NCCLS susceptibility category to an individual antimicrobial agent as an immediately previous isolate (4). For this study, the Cerner method was modified to include surveillance periods commonly used with other duplicate isolate removal methods: 3, 10, 30, 90, and 365 days. Therefore, in our setting, duplicate S. aureus isolates were defined by the modified Cerner methods as the same patient and same susceptibility to oxacillin as the immediately previous isolate found during the same analysis period. Any isolate obtained from a given patient during the period of analysis that showed a change in susceptibility from that of the previous isolate was included in calculations of susceptibility.

For each method, the percentage of susceptible isolates was calculated by dividing the number of susceptible isolates by the number of total isolates eligible for the inclusion method in each particular analysis. Tables 1 and 2 show how the various strategies are applied to hypothetical patient isolates and illustrate how the susceptibility percentages were calculated for each scenario. Ninety-five percent confidence intervals confidence interval,
n a statistical device used to determine the range within which an acceptable datum would fall. Confidence intervals are usually expressed in percentages, typically 95% or 99%.
 (CIs) for proportions of susceptibility were calculated by using the binomial binomial (bī'nō`mēəl), polynomial expression (see polynomial) containing two terms, for example, x+y. The binomial theorem, or binomial formula, gives the expansion of the nth power of a binomial (x+  method. When susceptibility proportions for specific clinical settings (or institutions) were calculated, only isolates obtained in that particular setting (or institution) were eligible for analysis.

Results

Susceptibility testing results were identified for 14,595 S. aureus clinical isolates obtained from 10,892 patients. A total of 3,725 isolates were from 2,749 patients with an associated MRN; 10,870 were from 8,143 patients identified with an APID. For all patients, the isolate-to-patient ratio was 1.3.

Figure 1 depicts the effect of duplicate isolate removal on S. aureus susceptibility to oxacillin for all isolates. NCCLS and Cerner methods produced similar estimates of susceptibility for any given analysis period, i.e., the difference between the 2 methods was insignificant. Furthermore, the difference in susceptibility percentage between a 90-day and 365-day period was <1% by either NCCLS or Cerner criteria, which was insignificant. With both Cerner and NCCLS methods, the general trend for estimates of susceptibility increased as the period of analysis lengthened length·en  
tr. & intr.v. length·ened, length·en·ing, length·ens
To make or become longer.



lengthen·er n.
.

[FIGURE 1 OMITTED]

No removal resulted in the lowest susceptibility estimate (67%) observed, even lower than that for most resistant (Figure 1). Overall, an inverse relationship A inverse or negative relationship is a mathematical relationship in which one variable decreases as another increases. For example, there is an inverse relationship between education and unemployment — that is, as education increases, the rate of unemployment  was observed between number of isolates included in the analysis and proportion of susceptible isolates (Figure 1). For both Cerner and NCCLS methods, point estimates of susceptibility rose slightly as the period of analysis increased and the number of isolates included in the susceptibility calculations decreased.

The patterns observed for all isolates combined remained unchanged when stratified stratified /strat·i·fied/ (strat´i-fid) formed or arranged in layers.

strat·i·fied
adj.
Arranged in the form of layers or strata.
 by different clinical settings, i.e., ICU ICU intensive care unit.

ICU
abbr.
intensive care unit



ICU

see intensive care unit.

ICU 
, non-ICU, and outpatient (Table 3). Within a given clinical setting, the difference in susceptibility frequencies with the 90- and 365-day intervals by either Cerner or NCCLS was <1%.

Differences in the magnitude of the effect of duplicate isolate removal were observed across different clinical settings (Table 3). For example, the effect of removal in the non-ICU and ICU environments was an increase of 8% and 6%, respectively, in the susceptible proportion when comparing 365-day NCCLS results to no removal; this comparison resulted in an increase of 2% in the outpatient setting.

In a subanalysis restricted to the 2,749 patients (3,725 isolates) with an associated MRN, results were highly analogous to those observed for the larger cohort as a whole. Specifically, for each clinical setting, the difference in the susceptibility estimate between NCCLS and Cerner methods was insignificant for any given period of analysis, and the difference in susceptibility percentage between a 90- and 365-day time period was <1% with either NCCLS or Cerner. In addition, the outpatient setting continued to show the least effect of duplicate isolate removal when compared to inpatient settings.

Finally, we examined the effect of each deduplication strategy for inpatients (ICU and non-ICU) at major hospitals. Although the hospitals were of different sizes, and their respective rates of MRSA MRSA Methicillin-resistant Staphylococcus aureus. See MARSA.  differed by what was seen with no removal, the effects of deduplication observed for each hospital individually were similar to those observed for the population-based surveillance dataset as a whole. Figure 2 illustrates the results of isolate deduplication from 2 of the hospitals with the largest number of S. aureus isolates in 2002.

[FIGURE 2 OMITTED]

Discussion

To our knowledge, this report is the first to compare the effect of different deduplication strategies on susceptibility patterns derived from a statewide, population-based antimicrobial resistance surveillance system. The relatively large sample of S. aureus isolates in this study was obtained from multiple healthcare settings by a variety of clinical laboratories. Because of the diversity of practice patterns represented in the study, we believe our findings are likely to be applicable to other facilities and agencies conducting antimicrobial resistance surveillance for MRSA.

The major findings from this analysis are the following: 1) NCCLS and modified Cerner methods yield similar results for a given analysis period; 2) with both NCCLS and modified Cerner, the number of total isolates included and the percentage that are MRSA decrease slightly as the period of analysis increases; 3) point estimates of the proportion of MRSA produced for a 90- or 365-day analysis period were statistically similar by either NCCLS or Cerner; and 4) the effect of deduplication was greater for inpatient settings compared to outpatient settings.

We also found that no removal produced the highest estimates of MRSA resistance, even higher than most resistant for the same analysis period. While this finding may seem at first paradoxical, it demonstrates the influence that practice patterns may have on reported rates of MRSA and why deduplication is critical. In our setting, cultures of samples from patients with MRSA were obtained more frequently than cultures from those with methicillin-susceptible strains (MSSA MSSA Methicillin-Sensitive Staphylococcus Aureus
MSSA Microscopy Society of Southern Africa
MSSA Maryland Saltwater Sportfishermen's Association
MSSA Military Selective Service Act
MSSA Mid-South Sociological Association
MSSA Minnesota Social Service Association
) so that, on average, individual patients with MRSA contributed more isolates, which could be included in the estimation of MRSA rates. This fact also explains why we observed, for both NCCLS and Cerner, an inverse relationship between the length of the analysis period and the rate of MRSA, i.e., the greater number of isolates included with shorter periods of analysis meant more MRSA isolates relative to MSSA strains. If reculturing patient samples is influenced by prior susceptibility testing results, an institution's MRSA percentages might be determined by the practice patterns of physicians working within the institution. Furthermore, trends in antimicrobial resistance could be obscured if practice patterns changed and reculturing samples from MSRA MSRA Microsoft Research Asia
MsrA Methionine Sulfoxide Reductase
MSRA Microsoft Security Response Alliance
MSRA Minnesota Street Rod Association
MSRA Manitoba Street Rod Association
MSRA Mississippi Restaurant Association
MSRA Maryland State Retirement Agency
 patients became more or less common.

Duplicate isolate removal facilitates comparing data among institutions and monitoring trends over time. However, at present, no clear consensus has been reached on the definition of duplicate isolates, and duplicate isolates cannot be easily identified with certainty in clinical practice (2,4-6). Our study found that NCCLS and modified Cerner methods yield similar results, and for either a 90-day or a 365-day analysis period, the produced estimates fall between results produced by the most resistant and most susceptible methods. Thus, NCCLS and Cerner might both be considered reasonable approaches. However, the NCCLS method has 1 major advantage: NCCLS is the only method that does not require the infection control practitioner to simultaneously compare susceptibility results for multiple isolates obtained from a given patient during the analysis period. With NCCLS, one simply includes the susceptibility results for the first isolate obtained during the analysis period. This straightforward approach would minimize opportunity for error and result in more consistent implementation of the deduplication process (5).

Regardless of which deduplication strategy is selected, the question remains which analysis period to adopt (5,6,11). A longer surveillance period increases the probability that an isolate representing a truly new resistance event (rather than a duplicate) will be removed (11,12). The purpose of antimicrobial resistance surveillance is to assess temporal trends, evaluate intervention efforts, and ultimately improve clinical outcomes on a population-based level. While the treating clinician clinician /cli·ni·cian/ (kli-nish´in) an expert clinical physician and teacher.

cli·ni·cian
n.
 will need to consider the susceptibility results for each isolate obtained from the patient, and perhaps promptly change therapy in response to new developments (13,14), population-based recommendations for antimicrobial treatment are not likely to be altered on the basis of 3, 10, or even 30 days of surveillance data. Therefore, adopting either a 90- or 365-day analysis period for MRSA surveillance appears reasonable. At the statewide level in Hawaii, the results seen with the 90- and 365-day NCCLS methods were nearly identical, so either option would be appropriate.

Antibiograms should be individualized in·di·vid·u·al·ize  
tr.v. in·di·vid·u·al·ized, in·di·vid·u·al·iz·ing, in·di·vid·u·al·iz·es
1. To give individuality to.

2. To consider or treat individually; particularize.

3.
 for specific clinical areas within an institution (e.g., ICUs) (15,16). In Hawaii, we observed differences in both MRSA rates as well as the magnitude of the effect of deduplication among the ICU, non-ICU, and outpatient settings; outpatient settings had the least effect. The greater effect of deduplication among inpatients may result from both the higher rate of MRSA among hospitalized patients and a greater likelihood of inpatients, especially those with MRSA, to have samples recultured compared to outpatients.

A major limitation of this analysis is that, because of medical confidentiality issues, we did not have patients' names. Since unique identities were determined by using an MRN generated by the treating facility or medical plan, a patient whose sample was cultured in >1 clinical facility during the analysis period might be miscounted as 2 persons. A related concern is that some laboratories did not provide the patient's MRN; for these patients, we had to use other information to generate an APID. While the APID process was not perfect and a small proportion of persons may have been misclassified as nonunique, a subanalysis that used only records with MRNs produced the same pattern of results as the analysis that used the larger dataset that incorporated the APID. This finding suggests that any misclassifications that resulted from using the APID did not substantially alter the relative effect of the different deduplication strategies we studied.

A second limitation is that we only assessed oxacillin resistance among S. aureus, so that conclusions regarding the effect of deduplication on other microorganisms must be made with caution. In addition, our analysis was not stratified by specific anatomic anatomic /ana·tom·ic/ (an?ah-tom´ik) anatomical.
Anatomic
Related to the physical structure of an organ or organism.
 culture site (e.g., blood vs. skin); therefore, the effect of various deduplication strategies on isolates from specific culture sites could not be addressed.

A third limitation is that we did not include deduplication methods that take into account patterns of phenotypic resistance to multiple antimicrobial agents Antimicrobial agents

Chemical compounds biosynthetically or synthetically produced which either destroy or usefully suppress the growth or metabolism of a variety of microscopic or submicroscopic forms of life.
 simultaneously (i.e., antibiotypes), as is practiced in some European countries (12). Tracking resistance by antibiotypes may show the actual number of infectious events or the selection of resistance occurring within the surveillance period. While these tasks are important for surveillance in some settings, the main purpose of our study was to evaluate a variety of uncomplicated strategies for generating communitywide susceptibility reports to specifically monitor MRSA trends and guide selection of empiric therapy Empiric therapy is a medical term referring to the initiation of treatment prior to determination of a firm diagnosis. It is most often used when antibiotics are given to a person before the specific microorganism causing an infection is known. . Nevertheless, further work is needed to examine the role of antibiotype surveillance in population-based antimicrobial surveillance systems.

We conclude that the NCCLS recommendation of including the first isolate of a given species per patient per analysis period, irrespective of body site, antimicrobial susceptibility profile, or other phenotypic characteristics, yielded results similar to other duplicate isolate removal methods and is straightforward in its implementation. Application of the techniques we examined had the same effect regardless of the institution. To aid our understanding of MRSA in both infection control practice and public health, we urge the widespread adoption of an industry standard. We suggest that adopting the 90- or 365-day NCCLS method would be appropriate, taking into account the goals of surveillance and the resources required.

Acknowledgments

We thank all participating laboratories and hospitals, including the Diagnostic Laboratory Services, Inc., Hawaii; Clinical Laboratories of Hawaii; Kaiser Permanente Kaiser Permanente is an integrated managed care organization, based in Oakland, California, founded in 1945 by industrialist Henry J. Kaiser and physician Sidney R. Garfield. ; Straub Clinic and Hospital; and Tripler Army Medical Center Tripler Army Medical Center is the headquarters of the Pacific Regional Medical Command of the armed forces administered by the United States Army in the State of Hawaii. It is the largest military hospital in the Asian and Pacific Rim region and serves a military sphere of .

This study was supported by the Centers for Disease Control and Prevention Centers for Disease Control and Prevention (CDC), agency of the U.S. Public Health Service since 1973, with headquarters in Atlanta; it was established in 1946 as the Communicable Disease Center.  Epidemiology epidemiology, field of medicine concerned with the study of epidemics, outbreaks of disease that affect large numbers of people. Epidemiologists, using sophisticated statistical analyses, field investigations, and complex laboratory techniques, investigate the cause  and Laboratory Capacity Cooperative Agreement (grant no.U50/CCU 923810-01).

References

(1.) Diekema D J, BootsMiller BJ, Vaughn TE, Woolson RE, Yankey JW, Ernst EJ, et al. Antimicrobial resistance trends and outbreak frequency in United States United States, officially United States of America, republic (2005 est. pop. 295,734,000), 3,539,227 sq mi (9,166,598 sq km), North America. The United States is the world's third largest country in population and the fourth largest country in area.  hospitals. Clin Infect infect /in·fect/ (in-fekt´)
1. to invade and produce infection in.

2. to transmit a pathogen or disease to.


in·fect
v.
1.
 Dis. 2004;38:78-85.

(2.) Fridkin SK, Edwards JR, Tenover FC, Gaynes RP. McGowan JE. Antimicrobial resistance prevalence rates in hospital antibiograms reflect prevalence rates among pathogens associated with hospital-acquired infections Hospital-Acquired Infections Definition

A hospital-acquired infection is usually one that first appears three days after a patient is admitted to a hospital or other health care facility.
. Clin Infect Dis. 2001;33:324-30.

(3.) Van Beneden CA, Lexau C, Baughman W, Barnes B, Bennett N, Cassidy PM, et al. Aggregated antibiograms and monitoring of drug-resistant Streptococcus pneumoniae Streptococcus pneu·mo·ni·ae
n.
Pneumococcus.


Streptococcus pneumoniae Microbiology A pathogenic streptococcus with 90 serotypes associated with pneumonia, bacteremia, meningitis Transmission Person to person Incidence
. Emerg Infect Dis. 2003;9:1089-95.

(4.) White RL, Friedrich LV, Burgess BURGESS. A magistrate of a borough; generally, the chief officer of the corporation, who performs, within the borough, the same kind of duties which a mayor does in a city. In England, the word is sometimes applied to all the inhabitants of a borough, who are called burgesses sometimes it  DS, Brown EW, Scott LE. Effect of removal of duplicate isolates on cumulative susceptibility reports. Diagn Microbiol Infect Dis. 2001;39:251-6.

(5.) Shannon KP, French GL. Validation of the NCCLS proposal to use results only from the first isolate of a species per patient in the calculation of susceptibility frequencies. J Antimicrob Chemother. 2002;50:965-9.

(6.) Shannon KP, French GL. Antibiotic resistance antibiotic resistance,
n the ability of certain strains of microorganisms to develop resistance to antibiotics.

antibiotic resistance 
: effect of different criteria for classifying isolates as duplicates on apparent resistance frequencies. J Antimicrob Chemother. 2002;49:201-4.

(7.) National Committee for Clinical Laboratory Standards. Analysis and presentation of cumulative antimicrobial susceptibility test data; approved guideline guideline Medtalk A series of recommendations by a body of experts in a particular discipline. See Cancer screening guidelines, Cardiac profile guidelines, Gatekeeper guidelines, Harvard guidelines, Transfusion guidelines. , document M39-A ([SBN SBN Society for Behavioral Neuroendocrinology
SBN Standard Book Number (now ISBN)
SBN Strontium Barium Niobate
SBN Site Builder Network
SBN Sociedade Brasileira de Neurocirurgia (Brazilian Society of Neurosurgery) 
 1-56238-463-5). Wayne (PA): The Committee; 2002.

(8.) Hawaii census 2000, Hawaii state data center tables, redistricting redistricting: see legislative apportionment.  data (Public Law 94-171), table 1: state and county population [data on the Internet]. [cited 2005 Apt 12]. Available from: http://www.hawaii.gov/dbedt/census2k/pltable1.xls

(9.) Diagnostic Laboratory Services, Inc [homepage on the Internet]. [cited 2005 Apt 19]. Available from: http://www.dlslab.com/dls/ page_server/Drafts/About%20DLS DLS
abbr.
Doctor of Library Science
%20Draft/4958E344AD76D419 ECE ECE Electrical and Computer Engineering
ECE Economic Commission for Europe
ECE Ecole Centrale d'Electronique (France)
ECE Educational Credential Evaluators Inc
ECE East Central Europe
ECE Endothelin Converting Enzyme
468B5AF.html

(10.) National Committee for Clinical Laboratory Standards. Performance standards for antimicrobial susceptibility testing; twelfth informational supplement M100-S12. Wayne (PA): The Committee; 2002.

(11.) Rodriguez JC, Sirvent E, Lopez-Lozano JM, Royo G. Criteria of time and antibiotic antibiotic, any of a variety of substances, usually obtained from microorganisms, that inhibit the growth of or destroy certain other microorganisms. Types of Antibiotics
 susceptibility in the elimination of duplicates when calculating resistance frequencies. J Antimicrob Chemother. 2003;52: 132-4.

(12.) Cornaglia G, Hryniewicz W, Jarlier V, Kahlmeter G, Mittermayer H, Stratchounski L, et al. European recommendations for antimicrobial resistance surveillance. Clin Microbiol Infect. 2004;10:349-83.

(13.) Thomson RB, File TM, Burgoon RA. Repeat antimicrobial susceptibility testing of identical isolates. J Clin Microbiol. 1989;27:1108-11.

(14.) Manian FA, Meyer L, Jenne J, Owen A, Taff T. Loss of antimicrobial susceptibility in aerobic aerobic /aer·o·bic/ (ar-o´bik)
1. having molecular oxygen present.

2. growing, living, or occurring in the presence of molecular oxygen.

3. requiring oxygen for respiration.

4.
 gram-negative bacilli bacilli /ba·cil·li/ (bah-sil´i) plural of bacillus.

bacilli

see bacillus.
 repeatedly isolated from patients in intensive-care units. Infect Control Hosp Epidemiol. 1996:17:222-6.

(15.) Itokazu GS, Quinn JP, Bell-Dixon C, Kahan FM, Weinstein RA. Antimicrobial resistance rates among aerobic gram-negative bacilli recovered from patients in intensive care units: evaluation of a national postmarketing surveillance Postmarketing surveillance is the practice of monitoring a pharmeceutical drug or device after it has been released on the market. Since drugs are approved on the basis of clinical trials which involve relatively small numbers of people who have been "controlled" for--meaning they  program. Clin Infect Dis. 1996;23:779-84.

(16.) O'Brien TF. The global epidemic nature of antimicrobial resistance and the need to monitor and manage it locally. Clin Infect Dis. 1997;24(Suppl 1):S2-8.

Fenfang Li, * Tracy L. Ayers, ([dagger]) Sarah Y. Park, ([dagger]) F. DeWolfe Miller, * Ralph MacFadden, ([dagger]) Michele Nakata, ([dagger]) Myra Ching For the Chinese surname Ching 程, see .

For the Chinese dynasty, see .
The ching (Thai: ฉิ่ง; sometimes romanized as chhing) are small bowl-shaped finger cymbals of thick and heavy bronze, with a broad rim commonly used in Cambodia and
 Lee, ([dagger]) and Paul V Paul V, 1552–1621, pope (1605–21), a Roman named Camillo Borghese; successor of Leo XI. He was created cardinal (1596) by Clement VIII and was renowned for his knowledge of canon law. . Effler [(dagger])

* University of Hawaii (body, education) University of Hawaii - A University spread over 10 campuses on 4 islands throughout the state.

http://hawaii.edu/uhinfo.html.

See also Aloha, Aloha Net.
 School of Medicine, Honolulu, Hawaii For the city and county of Honolulu, see City & County of Honolulu.

“Honolulu” redirects here. For other uses, see Honolulu (disambiguation).
Honolulu is the capital as well as the most populous community of the State of Hawaii, United States.
, USA; and ([dagger]) Hawaii Department of Health, Honolulu, Hawaii, USA

Mrs Li is a PhD candidate majoring in biomedical sciences Noun 1. biomedical science - the application of the principles of the natural sciences to medicine
bioscience, life science - any of the branches of natural science dealing with the structure and behavior of living organisms
 with an emphasis on epidemiology at the John A. Burns School of Medicine

The John A. Burns School of Medicine
, University of Hawaii. Her research interests are infectious disease Infectious disease

A pathological condition spread among biological species. Infectious diseases, although varied in their effects, are always associated with viruses, bacteria, fungi, protozoa, multicellular parasites and aberrant proteins known as prions.
 epidemiology and establishing active national infectious disease surveillance systems in developing countries.

Address for correspondence: Fenfang Li, Disease Outbreak Control Division, Hawaii Department of Health, 1132 Bishop St, Suite 1900, Honolulu, HI 96813, USA; tax: 808-586-4595; email:fenfang@ hawaii.edu
Table 1. Hypothetical data for Staphylococcus aureus
susceptibility to oxacillin *

                        Day

Patient   1   2   4   11   20   31   100

1         R   S   R   R    S    S     S
2         R   R   R   R    R    R     R
3         S   S   S   S    S    R     R

* R, resistant; S, susceptible.

Table 2. Application of different methods of duplicate isolate
removal based on hypothetical data in Table 1 *

Method             No. isolates   No. susceptible (%) ([dagger])

No removal              21                    9 (43)
Cerner, 3 d             19                    8 (42)
NCCLS, 3 d              18                    7 (39)
Cerner, 10 d            15                    6 (40)
NCCLS, 10 d             12                    4 (33)
Cerner, 30 d            12                    5 (42)
NCCLS, 30 d              9                    3 (33)
Cerner, 90 d            10                    4 (40)
NCCLS, 90 d              6                    2 (33)
Cerner, 365 d            7                    3 (43)
NCCLS, 365 d             3                    1 (33)
Most resistant           3                      0
Most susceptible         3                    2 (67)

* d, days; NCCLS, National Committee for Clinical Laboratory Standards.

([dagger]) Susceptibility percentage is calculated as the proportion of
the number of susceptible isolates divided by the number of total
isolates tested and eligible for inclusion according to the analysis
method used.

Table 3. Effect of duplicate isolate removal on Staphylococcus
aureus susceptibility to oxacillin, by clinical setting *

                               ICU

                                  No. susceptible
Method             No. isolates     (%, 95% CI)

No removal              843       465 (55, 52-59)
Cerner, 3 d             712       387 (54, 51-58)
NCCLS, 3 d              708       384 (54, 51-58)
Cerner, 10 d            629       355 (56, 53-60)
NCCLS, 10 d             616       352 (57, 53-61)
Cerner, 30 d            589       345 (59,55-63)
NCCLS, 30 d             574       341 (59, 55-63)
Most resistant          545       317 (58, 54-62)
Cerner, 90 d            574       339 (59, 55-63)
NCCLS, 90 d             558       335 (60, 56-64)
Cerner, 365 d           564       336 (60, 56-64)
NCCLS, 365 d            545       332 (61, 57-65)
Most susceptible        545       334 (61, 57-65)

                              Non-ICU

                                   No. susceptible
Method             No. isolates      (%, 95% CI)

No removal             3,894      1,971 (51, 49-52)
Cerner, 3 d            3,363      1,705 (51, 49-52)
NCCLS, 3 d             3,328      1,682 (51, 49-52)
Cerner, 10 d           3,090      1,614 (52, 50-54)
NCCLS, 10 d            3,038      1,584 (52, 50-54)
Cerner, 30 d           2,849      1,569 (55, 53-57)
NCCLS, 30 d            2,772      1,534 (55, 53-57)
Most resistant         2,426      1,355 (56, 54-58)
Cerner, 90 d           2,681      1,525 (57, 55-59)
NCCLS, 90 d            2,563      1,480 (58, 56-60)
Cerner, 365 d          2,578      1,485 (58, 56-60)
NCCLS, 365 d           2,426      1,420 (59, 57-60)
Most susceptible       2,426      1,468 (61, 59-62)

                            Outpatient

                                   No. susceptible
Method             No. isolates      (%, 95% CI)

No removal             9,858      7,281 (74, 73-75)
Cerner, 3 d            9,590      7,101 (74, 73-75)
NCCLS, 3 d             9,559      7,078 (74, 73-75)
Cerner, 10 d           9,500      7,045 (74, 73-75)
NCCLS, 10 d            9,461      7,020 (74, 73-75)
Cerner, 30 d           9,280      6,907 (74, 74-75)
NCCLS, 30 d            9,222      6,875 (75, 74-75)
Most resistant         8,427      6,295 (75, 74-76)
Cerner, 90 d           8,905      6,667 (75, 74-76)
NCCLS, 90 d            8,802      6,617 (75, 74-76)
Cerner, 365 d          8,589      6,444 (75, 74-76)
NCCLS, 365 d           8,427      6,368 (76, 75-76)
Most susceptible       8,427      6,433 (76, 75-77)

* ICU, intensive care unit; NCCLS, National Committee for Clinical
Laboratory Standards; CI, confidence interval.
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Author:Effler, Paul V.
Publication:Emerging Infectious Diseases
Geographic Code:1U9HI
Date:Oct 1, 2005
Words:4291
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