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Harvard/Partners Center for Genetics and Genomics Uses HP Solutions to Speed Biomedical Analysis, Collaboration Among Researchers.


BOSTON -- HP (NYSE NYSE

See: New York Stock Exchange
:HPQ HPQ Hewlett-Packard Corporation (NYSE)
HPQ High Priority Queue
) (Nasdaq:HPQ) today announced that it is enabling faster, more collaborative biomedical research Biomedical research (or experimental medicine), in general simply known as medical research, is the basic research or applied research conducted to aid the body of knowledge in the field of medicine.  for the Harvard Medical School Harvard Medical School (HMS) is one of the graduate schools of Harvard University. It is a prestigious American medical school located in the Longwood Medical Area of the Mission Hill neighborhood of Boston, Massachusetts.  -- Partners HealthCare Partners HealthCare is a non-profit organization that owns several hospitals in Massachusetts, primarily in the Boston area. Massachusetts General Hospital and Brigham and Women's Hospital founded the organization in 1994.  Center for Genetics and Genomics (HPCGG), one of the nation's premier biomedical research organizations, with the delivery of a high-performance HP server cluster based on Linux.

HP will develop a computational infrastructure capable of facilitating the use of genetic, genomic and proteomic technologies in both research and clinical medicine.

Today's announcement is part of a multi-year, multi-million dollar sponsorship agreement that began in September 2003, in which HP will provide solutions, services and research collaboration to support Partners' efforts to accelerate clinical genomics and advance the concept of individualized in·di·vid·u·al·ize  
tr.v. in·di·vid·u·al·ized, in·di·vid·u·al·iz·ing, in·di·vid·u·al·iz·es
1. To give individuality to.

2. To consider or treat individually; particularize.

3.
 medicine.

HPCGG, based in Cambridge, Mass., is a joint enterprise between Harvard Medical School and Partners HealthCare dedicated to accelerating the realization of personalized medicine The external links in this article or section may require cleanup to comply with Wikipedia's content policies.  by discovering and integrating genetic knowledge into the healthcare system.

HP has installed a 64-node HP Cluster Platform 4000 using its Linux-based XC System Software as an integral part of the Partners Research Grid, a collaborative project between HP and Partners designed to facilitate collaboration among researchers and clinicians at member institutions.

The Partners Research Grid, using the breadth of HP's Linux portfolio, delivers customers a competitive edge by helping them to dynamically manage their IT resources, become more agile and, at the same time, lowering their overall IT cost -- key elements of HP's Adaptive Enterprise strategy.

HP's secure, flexible and reliable open source and Linux solutions with support services support services Psychology Non-health care-related ancillary services–eg, transportation, financial aid, support groups, homemaker services, respite services, and other services  enable researchers at these institutions to share resources and data for analysis in the areas of proteomics and genomics as well as to effectively utilize the computing and storage resources and databases that are distributed across these institutions.

"With this system, analysis that used to take a month to run will only take days," said Isaac Kohane, M.D., Ph.D., HPCGG director of bioinformatics and principal investigator of the I2B I2B Intelligence to Business 2 National Center for Biomedical bi·o·med·i·cal
adj.
1. Of or relating to biomedicine.

2. Of, relating to, or involving biological, medical, and physical sciences.
 Computing. "It opens up an exciting new world of opportunities for collaborative healthcare research here in the Boston area."

Partners' new system will enable the consolidation of computational resources for the research community. The 64-node system provides the foundation for shared research computing environment, which provides the power for the larger computational challenges and reduces management costs for the Partners research community. The centralized solution also gives smaller research centers the added advantage of increased computational power in the shared environment.

The cluster will be managed by HP XC System Software, integrating Linux, Platform Computing's LSF LSF Lisofylline, see there  software, HP's MPI MPI - Message Passing Interface  (message passing interface (communications, protocol) Message Passing Interface - A de facto standard for communication among the nodes running a parallel program on a distributed memory system. MPI is a library of routines that can be called from Fortran and programs. ), as well as open source components such as Systemimager, SLURM and Nagios into a single, supported environment. The Cluster Platform 4000 deployed by Partners uses HP ProLiant DL145 and DL585 nodes, which boast two AMD (Advanced Micro Devices, Inc., Sunnyvale, CA, www.amd.com) A major manufacturer of semiconductor devices including x86-compatible CPUs, embedded processors, flash memories, programmable logic devices and networking chips.  Opteron(TM) 2.2-gigahertz processors and 4 gigabytes of memory per node, and Gigabit Ethernet connectivity. The XC software and HP Cluster Platform are part of HP's Unified Cluster Portfolio, announced last year at SC2004.

"Partners' new HP Cluster Platform will be a faster, more reliable and more stable environment for the important research that takes place at its institutions," said Winston Prather, vice president and general manager, High Performance Computing Division, HP. "HP's work in helping Partners to more effectively manage clinical innovation is extremely rewarding. Providing tools for its researchers to access and process critical information will benefit all of us."

The new system will be demonstrated at the LinuxWorld Conference and Expo LinuxWorld Conference and Expo is a conference and trade show that focuses on open source and Linux solutions in the information technology sector.

The show is owned and managed by IDG World Expo, a business unit of International Data Group (IDG).
, held in Boston from Feb. 15-17, at HP's exhibit in booth 801.

More information about HP's Linux solutions and presence at LinuxWorld is available in an online press kit at www.hp.com/go/opteronlinuxworld.

About Partners Healthcare

Partners HealthCare was founded in 1994 by Brigham and Women's Hospital Brigham and Women's Hospital (BWH) is a hospital in the Longwood Area of the Boston, Massachusetts neighborhood of Mission Hill. With Massachusetts General Hospital, it is one of the two founding members of Partners HealthCare.  and Massachusetts General Hospital Massachusetts General Hospital Health care The major teaching hospital for Harvard Medical School, widely regarded as one of the best health care centers in the world . Partners is an integrated healthcare delivery system that offers patients throughout the region a continuum of coordinated, high-quality care. The system includes primary care and specialty physicians, community hospitals, the two founding academic medical centers, specialty facilities, community health centers, home-based services and other health-related entities. Partners HealthCare is a non-profit organization. More information is available at www.partners.org.

About Harvard Medical School-Partners HealthCare Center for Genetics and Genomics

HPCGG combines world-class scientific talent with access to a population of more than 2 million patients and their physicians, providing a continuum of resources and expertise to rapidly translate scientific discoveries into diagnoses and treatments that benefit patients. Through its educational programs at Harvard Medical School and other academic institutions, the center has created the infrastructure to educate the medical profession on personalized medicine approaches. The center also operates full-service clinics for patients with known or suspected genetic conditions, as well as core facilities and services for genetic study design, DNA sequencing, genotyping, proteomics, bioinformatics and microarrays. More information is available at www.hpcgg.org.

About HP

HP is a technology solutions provider to consumers, businesses and institutions globally. The company's offerings span IT infrastructure, global services, business and home computing, and imaging and printing. For the four fiscal quarters ended Oct. 31, 2004, HP revenue totaled $79.9 billion. More information about HP is available at www.hp.com.

Linux is a U.S. registered trademark of Linus Torvalds. AMD Opteron is a trademark of Advanced Micro Devices, Inc.

This news release contains forward-looking statements that involve risks and uncertainties, as well as assumptions that, if they ever materialize or prove incorrect, could cause the results of HP and its consolidated subsidiaries to differ materially from those expressed or implied by such forward-looking statements and assumptions. All statements other than statements of historical fact are statements that could be deemed forward-looking statements, including the expected development, performance or rankings of products or services; statements of expectation or belief; and any statement of assumptions underlying any of the foregoing. Risks, uncertainties and assumptions include the development, performance and market acceptance of products and services and other risks that are described from time to time in HP's Securities and Exchange Commission reports, including but not limited to HP's Annual Report on Form 10-K Form 10-K

A report required by the SEC from exchange-listed companies that provides for annual disclosure of certain financial information.


Form 10-K

See 10-K.
 for the fiscal year ended Oct. 31, 2004. HP assumes no obligation and does not intend to update these forward-looking statements.

(C) 2005 Hewlett-Packard Development Company, L.P. The information contained herein is subject to change without notice. The only warranties for HP products and services are set forth in the express warranty statements accompanying such products and services. Nothing herein should be construed as constituting an additional warranty. HP shall not be liable for technical or editorial errors or omissions contained herein.
COPYRIGHT 2005 Business Wire
No portion of this article can be reproduced without the express written permission from the copyright holder.
Copyright 2005, Gale Group. All rights reserved. Gale Group is a Thomson Corporation Company.

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Date:Feb 15, 2005
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