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Global distribution of Panton-Valentine leukocidin--positive methicillin-resistant Staphylococcus aureus, 2006.


We determined the agr type, multilocus sequence type, protein A gene type (spa typing), toxin gene profile, and antimicrobial antimicrobial /an·ti·mi·cro·bi·al/ (-mi-kro´be-al)
1. killing microorganisms or suppressing their multiplication or growth.

2. an agent with such effects.
 drug resistance profile of 469 isolates of Panton-Valentine leukocidin--positive community-acquired methicillin-resistant Staphylococcus aureus methicillin-resistant Staphylococcus aureus Methicillin-aminoglycoside resistant Staphylococcus aureus, MRSA An organism with multiple antibiotic resistances–eg, aminoglycosides, chloramphenicol, clindamycin, erythromycin, rifampin, tetracycline,  isolates (PVL-positive CA-MRSA CA-MRSA Community Acquired Methicillin-Resistant Staphylococcus Aureus ). The isolates had been collected from around the world from 1999 through 2005 by the French National Reference Center for Staphylococci staph·y·lo·coc·cus  
n. pl. staph·y·lo·coc·ci
A spherical gram-positive parasitic bacterium of the genus Staphylococcus, usually occurring in grapelike clusters and causing boils, septicemia, and other infections.
. We found that some continent-specific clones described in 2003, such as clone ST8, have now spread all over the world. Likewise, some PVL-positive CA-MRSA have spread to several countries on various continents. New clones have emerged (e.g., ST377) on new genetic backgrounds. PVL-positive CA-MRSA that were usually susceptible to most antistaphylococcal antimicrobial agents Antimicrobial agents

Chemical compounds biosynthetically or synthetically produced which either destroy or usefully suppress the growth or metabolism of a variety of microscopic or submicroscopic forms of life.
 have acquired new resistance determinants (e.g., to gentamicin gentamicin /gen·ta·mi·cin/ (jen?tah-mi´sin) an aminoglycoside antibiotic complex isolated from bacteria of the genus Micromonospora, ) in certain countries. The major trait shared by all these clones is a short staphylococcal staphylococcal

pertaining to Staphylococcus spp.


staphylococcal clumping test
used as a means of measuring the quantity of fibrinogen-split products in a sample of blood.
 chromosomal cassette mec element of type IV or V.

**********

By definition, community-acquired methicillin-resistant Staphylococcus aureus (CA-MRSA) strains infect patients with no risk factors for acquiring an MRSA MRSA Methicillin-resistant Staphylococcus aureus. See MARSA.  strain of hospital origin. CA-MRSA infections usually affect previously healthy young patients (1). These infections are mostly of skin and soft tissue, but deep-seated infections such as necrotizing pneumonia Necrotizing pneumonia
Pneumonia that causes the death of lung tissue. It often precedes the development of lung abscess.

Mentioned in: Lung Abscess

necrotizing pneumonia Pulmonology 1 Aspiration pneumonia, see there 2.
 and disseminated invasive osteomyelitis osteomyelitis (ŏs'tēōmī'əlī`tĭs), infection of the bone and bone marrow. Direct infection of bone usually occurs through open fractures, penetrating wounds, or surgical operations.  have been described (2). Many CA-MRSA isolates produce Panton-Valentine leukocidin Panton-Valentine leukocidin

a nonhemolytic toxin produced by Staphylococcus aureus which kills segmented neutrophils and macrophages.
 (PVL PVL Periventricular Leukomalacia
PVL Prevail
PVL Parameter Value Language
PVL Pade Via Lanczos (circuit modeling)
PVL Physical Volume Library
PVL Pascack Valley Line (New Jersey Transit commuter rail line) 
) and harbor a type IV staphylococcal chromosomal cassette mec (SCCmec) element, but some isolates harboring the SCCmec V element have been reported (3). PVL-positive CA-MRSA clones have spread throughout the world (4).

In 2003, Vandenesch et al. described continent-specific PVL-positive CA-MRSA clones (mainly on an agr3 background) and characterized them by their sequence type (ST) (4). The main European clone, ST80, was detected in France, Switzerland, the Netherlands, England, Belgium, and Germany (5,6), but also in northern Europe (e.g., Denmark), where MRSA strains are rare in hospitals (7). One of the most prevalent PVL-positive CA-MRSA clones in the United States United States, officially United States of America, republic (2005 est. pop. 295,734,000), 3,539,227 sq mi (9,166,598 sq km), North America. The United States is the world's third largest country in population and the fourth largest country in area.  (USA300) belongs to ST8 (8); other US clones include USA400 (ST1), USAI USAI United States Army Intelligence
USAI United States Association of Immigrants
000 (ST59), and USA1100 (ST30) (9). ST30 is also a major clone in Asia and Oceania (10,11) and is referred to as the South West Pacific clone (11). In Singapore, an international travel hub, several clones belonging to ST80, ST30, and ST59 have been reported (12). The prevalence of PVL-positive CA-MRSA varies considerably from continent to continent. In the United States, MRSA were isolated from 50% of patients with skin and soft-tissue infections seen in emergency departments of 11 cities (97% of isolates belonged to clone USA300) (13). In Europe, the prevalence is lower, at [approximately equal to] 13% (14).

Since 1999, the French National Center for Staphylococci has characterized 469 PVL-positive CA-MRSA isolates collected throughout the world. The isolates were typed by multilocus sequence type (MLST MLST Multi Locus Sequence Typing
MLST Medical Logistics Support Team
MLST Mini Losi Super Truck (1/18th scale radio control vehicle) 
), protein A gene type (spa typing), antimicrobial drug resistance profiling, and toxin and resistance gene analysis. We describe the evolution and spread of PVL-positive CA-MRSA clones since their initial description.

Materials and Methods

Bacterial Isolates

From 1999 through 2005, the French National Reference Center for Staphylococci received 469 PVL-positive CA-MRSA isolates from 17 countries. These isolates were voluntarily sent to the center for PVL for gene detection and genomic characterization (clone designation). A single strain was selected per patient. Twenty-two isolates corresponded to an outbreak linked to a maternity unit that occurred in France in 2002-2003.

DNA Extraction DNA extraction is a routine procedure to collect DNA for subsequent molecular or forensic analysis. Outline of a DNA extraction
There are three basic steps in a DNA extraction, the details of which may vary depending on the type of sample and any substances that may
 and Identification of agr Alleles

The strains were grown on brain-heart infusion agar or in brain-heart infusion broth at 37[degrees]C overnight. Genomic DNA genomic DNA
n.
The full complement of DNA contained in the genome of a cell or organism.
 was extracted with a standard procedure (15). Amplification of gyrA was used to confirm the quality of each DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 extract and the absence of PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
 inhibitors. All PCR products were analyzed by electrophoresis on ethidium bromide-stained 1% agarose agarose

more highly purified form of agar with similar uses to agar and widely used in the separation of nucleic acid fragments.
 gels (Sigma, Lyon, France). The agr group (agr 1-4) was determined by PCR as previously described (15).

Detection of the mecA Gene and SCCmec Typing

The mecA gene (coding for methicillin methicillin /meth·i·cil·lin/ (meth?i-sil´in) a semisynthetic penicillin highly resistant to inactivation by penicillinase; used as the sodium salt.

meth·i·cil·lin
n.
 resistance) was detected by PCR as previously described (3). The staphylococcal chromosomal cassette mec (SCCmec I-IV) was detected as described by Oliveira et al. (16), and SCCmec type V was detected as previously described (3). The following reference strains were used as controls: COL (SCCmec I), BK2464 (SCCmec II), HU106 (SCCmec III), and BK2529 (SCCmec IV).

Detection of Toxin Genes

Using PCR, we determined the presence of 22 specific staphylococcal virulence Virulence

The ability of a microorganism to cause disease. Virulence and pathogenicity are often used interchangeably, but virulence may also be used to indicate the degree of pathogenicity.
 genes, as described previously (15,17). We detected sequences specific for staphylococcal enterotoxin Noun 1. staphylococcal enterotoxin - a soluble exotoxin produced by some strains of staphylococcus; a cause of food poisoning
enterotoxin - a cytotoxin specific for the cells of the intestinal mucosa
 genes (sea-e, seh, sek, sem, seo), as well as the toxic-shock syndrome toxin gene (tst), exfoliative ex·fo·li·a·tive
adj.
Marked by exfoliation, desquamation, or profuse scaling.
 toxin genes (eta, etb, etd), PVL genes (lukS-PV-lukF-PV), LukE-lukD leukocidin genes (lukE-lukD), the class F lukM leukocidin gene (lukM), hemolysin hemolysin /he·mol·y·sin/ (he-mol´i-sin) a substance that liberates hemoglobin from erythrocytes by interrupting their structural integrity.

he·mol·y·sin
n.
 genes (gamma [hlg], gamma variant [hlgv] and [beta] [hlb]), and epidermal cell Noun 1. epidermal cell - any of the cells making up the epidermis
epidermis, cuticle - the outer layer of the skin covering the exterior body surface of vertebrates

skin cell - any of the cells making up the skin
 differentiation inhibitor genes (edinA/B/C).

Antimicrobial Susceptibility Testing

MICs of penicillin, oxacillin oxacillin /ox·a·cil·lin/ (ok?sah-sil´in) a semisynthetic penicillinase-resistant penicillin used as the sodium salt in infections due to penicillin-resistant, gram-positive organisms. , cefoxitin, kanamycin kanamycin /kan·a·my·cin/ (kan?ah-mi´sin) an aminoglycoside antibiotic derived from Streptomyces kanamyceticus, effective against aerobic gram-negative bacilli and some gram-positive bacteria, including mycobacteria; used as the , tobramycin tobramycin /to·bra·my·cin/ (to?brah-mi´sin) an aminoglycoside antibiotic derived from a complex produced by Streptomyces tenebrarius, , gentamicin, erythromycin erythromycin (ĭrĭth'rōmī`sĭn), any of several related antibiotic drugs produced by bacteria of the genus Streptomyces (see antibiotic). , clindamycin, tetracycline tetracycline (tĕ'trəsī`klēn), any of a group of antibiotics produced by bacteria of the genus Streptomyces. They are effective against a wide range of Gram positive and Gram negative bacteria, interfering with protein , pristinamycin, ofloxacin, fusidic acid fusidic acid

a lipophilic steroid antibioitic, the product of Fusidium coccineum; mainly active against gram-positive bacteria.
, vancomycin vancomycin (văn'kōmī`sĭn), antibiotic resembling penicillin in the way it acts. It is derived from the bacterium Streptomyces orientalis, which was isolated from soil of India and Indonesia. , teicoplanin, fosfomycin, trimethoprim/sulfamethoxazole, rifampin rifampin (rĭfăm`pĭn), antibiotic used in the treatment of tuberculosis. It is also used to eliminate the meningococcus microorganism from carriers and to treat leprosy, or Hansen's disease. , mupirocin, quinupristin/dalfopristin, and linezolid were determined by using the standard agar dilution technique, as recommended by the French Society for Microbiology. Structural genes for resistance to tetracycline, aminoglycosides, and macrolide-lincosamide-streptogramin (18) were identified by PCR. DNA was amplified in a model 2400 thermal cycler The Thermal cycler (also known as a thermocycler, PCR machine or DNA amplifier) is a laboratory apparatus used for PCR. The device has a thermal block with holes where tubes with the PCR reaction mixtures can be inserted.  (Perkin-Elmer Cetus, Norwalk, CT, USA) with Taq (Qbiogene, Inc., Carlsbad, CA, USA) or Pfu (Stratagene, La Jolla La Jolla (lə hoi`yə), on the Pacific Ocean, S Calif., an uninc. district within the confines of San Diego; founded 1869. The beautiful ocean beaches, in particular La Jolla shores and Black's Beach, and sea-washed caves attract visitors and , CA, USA) DNA polymerase DNA polymerase /DNA po·lym·er·ase/ (pah-lim´er-as) any of various enzymes catalyzing the template-directed incorporation of deoxyribonucleotides into a DNA chain, particularly one using a DNA template. , as recommended by the manufacturers. PCR elongation elongation, in astronomy, the angular distance between two points in the sky as measured from a third point. The elongation of a planet is usually measured as the angular distance from the sun to the planet as measured from the earth.  times and temperatures were adjusted to the expected size of the PCR product and to the nucleotide sequences of the primers, respectively.

spa Typing

spa typing was performed on PVL-positive MRSA isolates as previously described (19). The x region of the spa gene was amplified by PCR. spa types were determined with the Ridom Staph staph
n.
Staphylococcus.



staph adj.
 Type software (Ridom GmbH, Wurzburg, Germany), which automatically detects spa repeats and assigns a spa type according to according to
prep.
1. As stated or indicated by; on the authority of: according to historians.

2. In keeping with: according to instructions.

3.
 Harmsen et al. (20) (http://spaserver.ridom.de). When the recently developed algorithm BURP (Based Upon Repeat Patterns) was applied, spa types were clustered into different groups with calculated cost between members of a group [less than or equal to] 6. spa types shorter than 3 repeats were excluded from analysis because no reliable deduction about ancestries can be made from these types. In addition to point mutation point mutation
n.
A mutation that involves a single nucleotide and may consist of loss of a nucleotide, substitution of one nucleotide for another, or the insertion of an additional nucleotide.
 events, the new algorithm takes all other modifications that can occur (repeat or duplication or deletion) into account when the relatedness of different spa types is calculated. Because of speed constrains, a heuristic A method of problem solving using exploration and trial and error methods. Heuristic program design provides a framework for solving the problem in contrast with a fixed set of rules (algorithmic) that cannot vary.

1.
 version of the EDSI-Alignment (Excisions, Duplications, Substitutions, Insertions), as described by Sammeth et al., was used (21). BURP spa clonal complexes (spa-CC) were automatically assigned by the Ridom Staph Type software (www.ridom. de/staphtype/).

MLST

MLST was performed on representative strains of each clonal group, as described elsewhere (22). The allelic al·lele  
n.
One member of a pair or series of genes that occupy a specific position on a specific chromosome.



[German Allel, short for Allelomorph, allelomorph, from English
 profile of each strain was obtained by sequencing internal fragments of 7 housekeeping genes (arcC, aroE, glpF, gmk, pta, tpi, yqiL) and entering them on the MLST home page (http://saureus.mlst.net), where 7 numbers depicting the allelic profile were assigned that defined a ST (22). Similar STs were grouped into clonal complexes (CC).

Results

agr and STs

The 469 PVL-positive CA-MRSA isolates were agr type 1 (n = 46, 9.8%), agr2 (n = 9, 1.9%), or agr3 (n = 414, 88.3%); none was agr4 (Table 1). The 469 PVL-positive isolates belonged to 11 STs: the agr1 isolates were ST8, ST59, ST22, ST766, or ST377; the agr2 isolates were all ST5; and the agr3 isolates were ST80, ST30, ST37, ST93, or ST1 (Table 1). None of the STs were shared by different agr types. The most frequent ST was ST80 (n = 357, 76.1%), which corresponded to the European clone.

spa Types and spa Clonal Complexes

The spa types were specific for agr type and ST. Minor variations of spa types (deletions or duplications of SSR (Scalable Sampling Rate) See AAC.

SSR - Scalable Sampling Rate
 units) were observed in several isolates within the same ST. For instance, 9 spa types were recognized among the 357 ST80 isolates, but t044 was the major spa type (n = 333, 93.3%); 8 of these spa types belonged to the same spa CC. A unique spa CC corresponded to each ST, except for ST1 isolates, which formed 3 different spa CC (Table 1).

Geographic Origin and Spread

A previous study (4) showed a limited number of clones and a limited geographic distribution. Schematically, ST80 was detected in Europe, ST8 and ST1 in the United States, and ST30 in Oceania. The results of our study suggest intercontinental exchanges of several clones (Table 1): 1) the ST8 clone (USA300) from the United States toward Europe; 2) the ST1 clone (USA400) from the United States toward Europe and Asia; 3) the ST59 clone (USA1000) from the United States toward Asia; 4) the ST80 clone from Europe toward Asia (12); and 5) the ST30 clone from Oceania toward Europe. Countries with numerous international exchanges (e.g., Singapore) have the highest clonal diversity.

New clones have been detected since 2003. One, ST22, has been found in Europe only. Another new clone, ST766, which belongs to the same CC (CC22) as ST22, was found in Singapore (12). Clone ST377 (with a type V SCCmec) was reported simultaneously in Europe and Australia (3). Clone ST5 was detected in Europe only. Clone ST93 (the Queensland clone), described in Australia before 2003, has not yet been detected in other countries (11).

Toxin Gene Content

The toxin gene distributions were compared to determine the genetic background of the different clones with minor variations. For instance, ST80 isolates were all positive for etd, lukS-PV, lukF-PV, and edinA/B/C; very few lacked lukDE or hlgv or harbored hlB (Table 2). Superantigenic toxin genes were detected in isolates that belonged to the different STs, except for ST377, ST80, and ST93 (Table 2).

Antimicrobial Drug Resistance

Isolates of each ST were grouped according to the number of antimicrobial drug resistance determinants they harbored. Initial PVL-positive CA-MRSA isolates were susceptible to most antimicrobial agents. For instance, 8 of the 25 ST8 isolates included in this study between 2003 through 2005 were resistant to penicillin and oxacillin alone, as were 17 of the 32 ST1 isolates and 18 of the 20 ST30 isolates (Online Appendix Table, available at www.cdc.gov/EID/content/13/4/594-appT.htm). ST80 isolates were initially resistant to penicillin, oxacillin, kanamycin, and tetracycline, and intermediate to fusidic acid. Since 2003, new antimicrobial resistance determinants have been acquired (e.g., gentamicin and ofloxacin). One ST8 isolate was resistant to penicillin, oxacillin, kanamycin, erythromycin, tetracycline, and ofloxacin; 1 ST1 isolate was resistant to penicillin, oxacillin, kanamycin, tobramycin, and gentamicin. A few ST80 isolates from Algeria were resistant to multiple antimicrobial agents. Most PVL-positive CA-MRSA strains with multiple antimicrobial resistant determinants were detected in Asia (Singapore, People's Republic People's Republic
n.
A political organization founded and controlled by a national Communist party.
 of China) or Africa (Algeria).

Antimicrobial Resistance Genes

Antimicrobial resistance genes were sought in a subset of 153 ST80 isolates. The aph3'-III gene, which encodes high-level resistance to kanamycin and neomycin neomycin (nē'ōmī`sĭn), broad spectrum antibiotic effective against both gram positive and gram negative bacteria (see Gram's stain).  but also to amikacin and isepamycin, was detected in all 153 isolates (100%). The tetK efflux efflux Medtalk That which flows outward  gene was detected in 125 (82%) of tetracycline-resistant isolates. The ermC gene, an erythromycin ribosome ribosome: see cell; nucleic acid.
ribosome

Tiny particle, the site of protein synthesis, that is present in large numbers in living cells. They occur both as free particles within cells and, in eukaryotes, as particles attached to the membranes of
 methylase, was detected in 61 (40%) of erythromycin-resistant isolates. The far-1 gene was detected in 133 (87%) of fusidic acid-intermediate isolates.

SCCmec Types

SCCmec type was determined for 22 agr1 isolates (10 ST8, 1 ST59, 1 ST22, and 10 ST377); 5 agr2 isolates (ST5); 190 agr3 isolates (179 ST80, 9 ST30, 2 ST93, and 7 ST1). All the isolates were SCCmec type IV, except for the 10 ST377 isolates, which were SCCmec type V.

Discussion

This study has several findings. First, the continent-specific clones of PVL-positive CA-MRSA described in 2003 by Vandenesch et al. (4) have now spread to other continents. For instance, the ST1 clone USA400 is now detected in Europe and Asia. Some PVL-positive clones, such as ST1 and ST30, can now be considered pandemic pandemic /pan·dem·ic/ (pan-dem´ik)
1. a widespread epidemic of a disease.

2. widely epidemic.


pan·dem·ic
adj.
Epidemic over a wide geographic area.

n.
, as they are detected in America, Europe, and Asia. Second, on a given continent, PVL-positive CA-MRSA have spread from country to country. For instance, in Europe, PVL-positive CA-MRSA were recently detected in Slovenia, Romania, and Croatia. Third, new PVL-positive CA-MRSA clones are emerging in strains with different genetic backgrounds. While most of the clones described in 2003 by Vandenesch et al. (4) had an agr3 background, the newly described clones are agr1 or agr2. Fourth, PVL-positive CA-MRSA, which were initially susceptible to most antistaphylococcal antimicrobial agents, have acquired new antimicrobial resistance determinants, to gentamicin and ofloxacin, for instance.

The global ST distribution of PVL-positive CA-MRSA isolates in this study depends, of course, on the sources of the isolates received by the French National Reference Center for Staphylococci and does not reflect the current epidemiology. Our collection represents a passive surveillance study and is related to the increased attention paid to CA-MRSA by certain regions. Nevertheless, our results agree with other reports which confirm that ST80 is mainly found in Europe (e.g., Denmark [7], Finland [27], and Greece [24]), but also in Libya (28); ST30 is pandemic (34).

PVL-negative, hospital-acquired MRSA belong to 5 major CCs (CC5, CC8, CC22, CC30, CC45). PVL-positive CA-MRSA of the same clonal classes were also detected in our study, with the exception of CC45, but the PVL + MRSA strains showed a broader CC diversity. For instance, none of the ST80 isolates belonged to CCs harboring hospital strains. PVL-positive CA-MRSA are gradually causing an increasing number of hospital-acquired infections Hospital-Acquired Infections Definition

A hospital-acquired infection is usually one that first appears three days after a patient is admitted to a hospital or other health care facility.
 in countries, such as the United States, where their prevalence is high (35). Kourbatova et al. reported that, during the period 2003-2004, five prosthetic pros·thet·ic
adj.
1. Serving as or relating to a prosthesis.

2. Of or relating to prosthetics.



prosthetic

serving as a substitute; pertaining to prostheses or to prosthetics.
 joint infections were caused by USA300 strains (36).

The worldwide spread of PVL-positive CA-MRSA is likely related to international travel. ST80 isolates recovered in France were mainly detected in patients who were originally from Algeria, a country that reported a high rate of community- and hospital-acquired infections due to ST80 isolates in 2006 (37). Maier et al. recovered ST22 strains from Turkish migrants in Germany (38). Acquisition of new antimicrobial resistance determinants could be related to misuse of antimicrobial agents; the spread of multidrug-resistant strains could be facilitated by poor hygiene, regardless of country.

It is not known whether PVL-positive CA-MRSA clones arose through acquisition of the PVL phage phage: see bacteriophage.

phage - A program that modifies other programs or databases in unauthorised ways; especially one that propagates a virus or Trojan horse. See also worm, mockingbird. The analogy, of course, is with phage viruses in biology.
 by strains with a methicillin resistance background or, conversely, through acquisition of the SCCmec element by strains with a PVL-positive background. On analyzing the database of the French National Reference Center for Staphylococci, which contains >5,000 toxin gene profiles, we found isolates that were related to the PVL-positive MRSA clone ST80 but lacked either the PVL genes (5 isolates) or the mecA gene (7 isolates) (data not shown). These isolates, like the ST80 clone, were agr3, etd+, edinA/B/C+; 1 isolate (PVL- mecA+) was ST80, and another (PVL+ mecA-) was ST635 (a single-locus variant of ST80). These "atypical" isolates were discovered in Algeria, Switzerland, and France. We are unable to state whether they are ancestors or descendants of the most prevalent strains.

Deep-seated infections due to PVL-positive S. aureus The aureus (pl. aurei) was a gold coin of ancient Rome valued at 25 silver denarii. The aureus was regularly issued from the 1st century BC to the beginning of the 4th century AD, when it was replaced by the solidus.  can be extremely severe. For example, necrotizing pneumonia carries a mortality rate close to 75% (39). Whether the pathogenesis of these acute infections is related to the effect of PVL alone or in combination with other virulence factors such as superantigenic toxins is unclear. We found that some PVL-positive CA-MRSA clones (ST80) lacked any superantigenic toxin genes. Among the S. aureus virulence factors (not screened for here), ST30 strains harbor the bbp gene, which encodes bone sialoprotein Bone sialoprotein (BSP) is a component of mineralized tissues such as bone, dentin, cementum and calcified cartilage. BSP is a significant component of the bone extracellular matrix and has been suggested to constitute approximately 8% of all non-collagenous proteins found in bone  (34). The SCCmec elements detected in our collection were type IV or V and corresponded to the smallest SCCmec element.

PVL-positive CA-MRSA are usually susceptible to most antistaphylococcal antimicrobial agents. Clone ST80 is usually resistant to tetracycline (mediated by the tetK gene), intermediate to fusidic acid (far1 gene), and resistant to kanamycin (aph3'-III gene). We observed the emergence of rare isolates with multiple resistances to antimicrobial agents such as gentamicin and ofloxacin. From the therapeutic viewpoint, all the isolates were susceptible to trimethoprim-sulfamethoxazole, glycopeptides, and linezolid.

The involvement of PVL in CA-MRSA infections has not been proved in mouse sepsis Sepsis Definition

Sepsis refers to a bacterial infection in the bloodstream or body tissues. This is a very broad term covering the presence of many types of microscopic disease-causing organisms.
 and abscess abscess, localized inflamation associated with tissue necrosis. Abscesses are characterized by inflamation, which is due to the accumulation of pus in the local tissues, and often painful swelling.  models developed by Voyich et al.: isogenic isogenic /iso·gen·ic/ (-jen´ik) syngeneic.
isogenic (ī´sōjen´ik),
adj originating from a common source; possessing the same genetic composition.
 PVL-negative strains of USA300 and 400 were as lethal as wild-type strains, and they caused comparable skin diseases (40). Other experiments have to be conducted to determine if PVL is secreted in such a model.

In summary, since 2003 we have observed an impressive worldwide spread of PVL-positive CA-MRSA clones initially described at the beginning of this decade, and we have also detected PVL-positive CA-MRSA strains of other lineages. To counter this emerging global threat to public health, systematic surveillance of both hospital and community isolates is required, together with measures designed to limit their spread.

Acknowledgments

We thank the bacteriologists throughout the world who sent us PVL-positive CA-MRSA strains; Herminia de Lencastre and Alexander Tomasz for providing reference strains; C. Courtier, C. Gardon, M. Rougier, J. Thomas, C. Girard-Blanc and B. Short for technical help; D. Harmsen for helpful advice; and David Young David Young could refer to:
  • David 'Dai' Young, Former Welsh rugby union and Rugby league international and British Lion
  • David Young (Ontario politician)
  • David Young (NC politician)
 for editorial assistance.

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1. produced by or derived from the blood.

2. disseminated through the blood stream.


he·ma·tog·e·nous
adj.
1.
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n.
A bacterium that causes furunculosis, pyemia, osteomyelitis, suppuration of wounds, and food poisoning.


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(10.) Ho PL, Cheung C, Mak GC, Tse CW, Ng TK, Cheung CH, et al. Molecular epidemiology molecular epidemiology Molecular medicine An evolving field that combines the tools of standard epidemiology–case studies, questionnaires and monitoring of exposure to external factors with the tools of molecular biology–eg, restriction endonucleases,  and household transmission of community-associated methicillin-resistant Staphylococcus aureus in Hong Kong Hong Kong (hŏng kŏng), Mandarin Xianggang, special administrative region of China, formerly a British crown colony (2005 est. pop. 6,899,000), land area 422 sq mi (1,092 sq km), adjacent to Guangdong prov. . Diagn Microbiol Infect Dis. 2006;[Sep 19; Epub ahead of print]

(11.) Vlack S, Cox L, Peleg AY, Canuto C, Stewart C, Conlon A, et al. Carriage of methicillin-resistant Staphylococcus aureus in a Queensland indigenous community. Med J Aust. 2006; 184:556-9.

(12.) Hsu LY, Tristan A, Koh TH, Bes M, Etienne J, Kurup A, et al. Community associated methicillin-resistant Staphylococcus aureus, Singapore. Emerg Infect Dis. 2005; 11:341-2.

(13.) Moran GJ, Krishnadasan A, Gorwitz RJ, Fosheim GE, McDougal LK, Carey RB, et al. Methicillin-resistant S. aureus infections among patients in the emergency department. N Engl J Med. 2006;355:666-74.

(14.) Del Giudice P, Blanc V, Durupt F, Bes M, Martinez JP, Counillon E, et al. Emergence of two populations of methicillin-resistant Staphylococcus aureus with distinct epidemiological, clinical and biological features, isolated from patients with community-acquired skin infections. Br J Dermatol. 2006; 154:118-24.

(15.) Jarraud S, Mougel C, Thioulouse J, Lina G, Meugnier H, Forey F, et al. Relationships between Staphylococcus aureus genetic background, virulence factors, agr groups (alleles), and human disease. Infect Immun. 2002;70:631-41.

(16.) Oliveira DC, de Lencastre H. Multiplex See multiplexing.  PCR strategy for rapid identification of structural types and variants of the mec element in methicillin-resistant Staphylococcus aureus. Antimicrob Agents Chemother. 2002;46:2155-61.

(17.) Tristan A, Ying L, Bes M, Etienne J, Vandenesch F, Lina G. Use of multiplex PCR to identify Staphylococcus aureus adhesins involved in human hematogenous infections. J Clin Microbiol. 2003 ;41:4465-7.

(18.) Strommenger B, Kettlitz C, Weruer G, Witte W. Multiplex PCR assay for simultaneous detection of nine clinically relevant antibiotic resistance antibiotic resistance,
n the ability of certain strains of microorganisms to develop resistance to antibiotics.

antibiotic resistance 
 genes in Staphylococcus aureus. J Clin Microbiol. 2003;41:4089-94.

(19.) Mellmann A, Friedrich AW, Rosenkotter N, Rothganger J, Karch H, Reintjes R, et al. Automated DNA sequence-based early warning system for the detection of methicillin-resistant Staphylococcus aureus outbreaks. PLoS Med. 2006;3:e33.

(20.) Harmsen D, Claus H, Witte W, Rothganger J, Turnwald D, Vogel U. Typing of methicillin-resistant Staphylococcus aureus in a university hospital setting by using novel software for spa repeat determination and database management. J Clin Microbiol. 2003;41:5442-8.

(21.) Sammeth M, Weiniger T, Harmsen D, Stoye J. Alignment of Tandem Repeats with Excision, Duplication, Substitution and Indels (EDSI EDSI Engineering Design Systems, Inc (Roanoke, VA)
EDSI Engineering Documentation Systems Incorporated
). Proceedings of WABI (Windows ABI) Software from former Sun division SunSoft that emulated Windows applications under Unix by converting the calls made by Windows applications into X Window calls. Since it executed native code, it ran Windows applications at a high performance level. , Mallorca, Spain, 2005 Oct 3-6. In: Casadio R, Myers G, editors. Algorithms in bioinformatics. Vol. 3692. New York New York, state, United States
New York, Middle Atlantic state of the United States. It is bordered by Vermont, Massachusetts, Connecticut, and the Atlantic Ocean (E), New Jersey and Pennsylvania (S), Lakes Erie and Ontario and the Canadian province of
: Springer-Verlag; 2005.

(22.) Enright MC, Day NP, Davies CE, Peacock SJ, Spratt BG. Multilocus sequence typing Multilocus sequence typing (MLST) is a technique in molecular biology for the typing of multiple loci. The procedure characterizes isolates of bacterial species using the DNA sequences of internal fragments of multiple (usually seven) housekeeping genes.  for characterization of methicillin-resistant and methicillin-susceptible clones of Staphylococcus aureus. J Clin Microbiol. 2000;38:1008-15.

(23.) Hanssen AM, Fossum A, Mikalsen J, Halvorsen DS, Bukholm G, Sollid JU. Dissemination of community-acquired methicillin-resistant Staphylococcus aureus clones in northern Norway: sequence types 8 and 80 predominate. J Clin Microbiol. 2005;43:2118-24.

(24.) Chini V, Petinaki E, Foka A, Paratiras S, Dimitracopoulos G, Spiliopoulou I. Spread of Staphylococcus aureus clinical isolates carrying Panton-Valentine leukocidin genes during a 3-year period in Greece. Clin Microbiol Infect. 2006;12:29-34.

(25.) Wang CC, Lo WT, Chu ML, Siu LK. Epidemiological typing of community-acquired methicillin-resistant Staphylococcus aureus isolates from children in Taiwan. Clin Infect Dis. 2004;39:481-7.

(26.) Holmes A, Gannet gannet: see booby.
gannet

Any of three oceanic bird species (family Sulidae) closely related to the booby. Gannets are found in the North Atlantic, where they are the largest seabirds, and in temperate waters around Africa, Australia, and New
 M, McGuane S, Pitt TL, Cookson BD, Kearns AM. Staphylococcus aureus isolates carrying Panton-Valentine leucocidin genes in England and Wales England and Wales are both constituent countries of the United Kingdom, that together share a single legal system: English law. Legislatively, England and Wales are treated as a single unit (see State (law)) for the conflict of laws. : frequency, characterization, and association with clinical disease. J Clin Microbiol. 2005;43:2384-90.

(27.) Salmenlinna S, Lyytikainen O, Vuopio-Varkila J. Community-acquired methicillin-resistant Staphylococcus aureus, Finland. Emerg Infect Dis. 2002;8:602-7.

(28.) Harbarth S, Francois P, Shrenzel J, Fankhauser-Rodriguez C, Hugonnet S, Koessler T, et al. Community-associated methicillin-resistant Staphylococcus aureus, Switzerland. Emerg Infect Dis. 2005;11:962-5.

(29.) Krzyszton-Russjan J, Tambic-Andrasevic A, Bukovski S, Sabat A, Hryniewicz W. First community-acquired methicillin-resistant Staphylococcus aureus (MRSA) strains in Croatia. Clin Microbiol Infect. 2006;12:697-8.

(30.) Miklasevics E, Haeggman S, Balode A, Sanchez B, Martinsons A, Olsson-Liljequist B, et al. Report on the first PVL-positive community acquired MRSA strain in Latvia. Euro Surveill. 2004;9:29-30.

(31.) Ribeiro A, Dias C, Silva-Carvalho MC, Berquo L, Ferreira FA, Santos RN, et al. First report of infection with community-acquired methicillin-resistant Staphylococcus aureus in South America South America, fourth largest continent (1991 est. pop. 299,150,000), c.6,880,000 sq mi (17,819,000 sq km), the southern of the two continents of the Western Hemisphere. . J Clin Microbiol. 2005;43:1985-8.

(32.) Ma XX, Galiana A, Pedreira W, Mowszowicz M, Christophersen I, Machiavello S, et al. Community-acquired methicillin-resistant Staphylococcus aureus, Uruguay. Emerg Infect Dis. 2005;11:973-6.

(33.) Mulvey MR, MacDougall L, Cholin B, Horsman G, Fidyk M, Woods S. Community-associated methicillin-resistant Staphylococcus aureus, Canada. Emerg Infect Dis. 2005;11:844-50.

(34.) Otsuka T, Saito K, Dohmae S, Takano T, Higuchi W, Takizawa Y, et al. Key adhesin gene in community-acquired methicillin-resistant Staphylococcus aureus. Biochem Biophys Res Commun. 2006;346: 1234-44.

(35.) Seybold U, Kourbatova EV, Johnson JG, Halvosa S J, Wang YF, King MD, et al. Emergence of community-associated methicillin-resistant Staphylococcus aureus USA300 genotype genotype (jēn`ətīp'): see genetics.
genotype

Genetic makeup of an organism. The genotype determines the hereditary potentials and limitations of an individual.
 as a major cause of health care-associated blood stream infections. Clin Infect Dis. 2006;42:647-56.

(36.) Kourbatova EV, Halvosa JS, King MD, Ray SM, White N, Blumberg HM. Emergence of community-associated methicillin-resistant Staphylococcus aureus USA 300 clone as a cause of health care-associated infections among patients with prosthetic joint infections. Am J Infect Control. 2005;33:385-91.

(37.) Ramdani-Bouguessa N, Bes M, Meugnier H, Forey F, Reverdy ME, Lina G, et al. Detection of methicillin-resistant Staphylococcus aureus strains resistant to multiple antibiotics and carrying the Panton-Valentine leukocidin genes in an Algiers hospital. Antimicrob Agents Chemother. 2006;50:1083-5.

(38.) Maier J, Melzl H, Reischl U, Drubel I, Witte W, Lehn N, et al. H. Panton-Valentine leukocidin-positive methicillin-resistant Staphylococcus aureus in Germany associated with travel or foreign family origin. Eur J Clin Microbiol Infect Dis. 2005;24:637-9.

(39.) Gillet Y, Issartel B, Vanhems P, Fournet JC, Lina G, Bes M, et al. Association between Staphylococcus aureus strains carrying gene for Panton-Valentine leukocidin and highly lethal necrotising pneumonia in young immunocompetent im·mu·no·com·pe·tent
adj.
Having the normal bodily capacity to develop an immune response following exposure to an antigen.



im
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Address for correspondence: Anne Tristan, Centre National de Reference des Staphylocoques, INSERM INSERM Institut National de la Santé et de la Recherche Médicale (French Institute of Health and Medical Research)  E0230, Faculte de Medecine Laennec, 7 rue Guillaume Paradin, 69008 Lyon, France; email: anne.tristan@ chu-lyon.fr

Anne Tristan, * Michele Bes, * Helene Meugnier, * Gerard Lina, * Bulent Bozdogan, ([dagger]) Patrice Courvalin, ([dagger]) Marie-Elisabeth Reverdy, * Mark C. Enright, ([double dagger double dagger
n.
A reference mark () used in printing and writing. Also called diesis.

Noun 1.
]) Francois Vandenesch, * and Jerome Etienne *

* INSERM, Lyon, France; ([dagger]) Institut Pasteur, Paris, France; and ([double dagger]) Imperial College London History
Imperial College was founded in 1907, with the merger of the City and Guilds College, the Royal School of Mines and the Royal College of Science (all of which had been founded between 1845 and 1878) with these entities continuing to exist as "constituent colleges".
, London, United Kingdom
Table 1. Geographic distribution of PVL-positive CA-MRSA clones
according to their agr-type, ST, and spa type *

                                                            Location

agr                             spa type                    Detected
type    ST (CC)      No. (%)    (spa CC)      No. (%)     before 2003

agr1                46 (9.8)
        ST8 (8)     25 (54.3)                               USA (4)
                                t008 (s)    25 (100.0)
          ST59      7 (15.2)                                USA (4)
                                t437 (8)     6 (85.7)
                                t216 (8)     1 (14.3)
       ST22 (22)     3 (6.5)
                                t005 (4)     2 (66.7)
                                t310 (4)     1 (33.3)
       ST766 (22)    1 (2.2)
                                t1276 (4)    1 (100.0)
         ST377      10 (21.7)

                                t355 (6)     9 (90.0)
                                t595 (6)     1 (10.0)
agr2                 9 (1.9)
        STS (5)     9 (100.0)
                                t311 (5)     5 (55.5)
                                  t1277      3 (33.3)
                                  t450       1 (11.1)
agr3                414 (88.3)
          ST80      357 (83.2)                              France,
                                                          Switzerland
                                                              (4)
                                t044 (1)    333 (93.3)
                                t131 (1)      9 (2.5)
                                t376 (1)      8 (2.2)
                                t639 (1)      2 (0.6)
                                t237 (1)      1 (0.3)
                                t1199 (1)     1 (0.3)
                                t1201 (1)     1 (0.3)
                                t1206 (1)     1 (0.3)
                                t1200 (t)     1 (0.3)
       ST30 (30)    20 (4.8)                              New Zealand,
                                                            Western
                                                           Samoa (4)
                                t019 (2)     17 (75.0)
                                t021 (2)      1 (5.0)
                                t318 (2)      1 (5.0)
                                t1273 (2)     1 (5.0)
       ST37 (30)     1 (0.2)
                                t914 (2)     1 (100.0)
          ST93       4 (1.0)                              Australia (4)
                                t202 (s)     4 (100.0)
          ST1       32 (7.7)                                USA (4)
                                t128 (3)     18 (56.2)
                                t125 (3)      3 (9.4)
                                t558 (3)      1 (3.1)
                                t175 (7)      8 (25.0)
                                t1274 (7)     1 (3.1)
                                t1272 (s)     1 (3.1)

                                             Location
agr
type    ST (CC)      No. (%)        Newly detected (this work)

agr1                46 (9.8)
        ST8 (8)     25 (54.3)       Netherlands, France, Spain,
                                  Switzerland, French Polynesia
          ST59       7 (15.2)          Netherlands, France,
                                            Singapore
       ST22 (22)     3 (6.5)           Netherlands, Germany
       ST766 (22)    1 (2.2)                Singapore
         ST377      10 (21.7)      Netherlands, France, Greece,
                                      Switzerland, Australia
agr2                 9 (1.9)
        STS (5)      9 (100.0)     France, Switzerland, Algeria
agr3                414 (88.3)
          ST80      357 (83.2)     Algeria, Singapore, Romania,
                                    Germany, Belgium, Greece,
                                      Slovenia, Netherlands
       ST30 (30)     20 (4.8)     Netherlands, Australia, Japan,
                                     Switzerland, Singapore,
                                     China, French Polynesia
       ST37 (30)      1 (0.2)               Netherlands
          ST93        4 (1.0)
          ST1        32 (7.7)           France, Singapore

agr
type    ST (CC)      No. (%)       Other reports in literature

agr1                 46 (9.8)
        ST8 (8)      25 (54.3)            N. Norway (23)
                                           Greece (24)
          ST59        7 (15.2)             Taiwan (25)
       ST22 (22)      3 (6.5)
       ST766 (22)     1 (2.2)
         ST377       10 (21.7)
agr2                  9 (1.9)
        STS (5)       9 (100.0)
agr3                414 (88.3)
          ST80      357 (83.2)       Denmark (7), Sweden (7),
                                      notheren Norway (23),
                                   England (26), Finland (27),
                                    Libya (28), Croatia (29),
                                    Scotland (7), Greece (24)
       ST30 (30)     20 (4.8)       Sweden (30), Brazil (31),
                                   Uruguay (32), England (26),
                                          Hong Kong (10)
       ST37 (30)      1 (0.2)
          ST93        4 (1.0)
          ST1        32 (7.7)           Switzerland (28),
                                           Canada (33)

* PVL, Panton-Valentine leukodin; CA-MRSA, community-acquired
methicillin-resistant Staphylococcus aureus; agr, accessory gene
regulator; ST, sequence type; CC, clonal complexes; spa CC, spa clonal
complexes.

([dagger]) Excluded because [less than or equal to] 3 repeats;
s, singleton.

Table 2. Toxin gene content of PVL-positive community-acquired
methicillin-resistant Staphylococcus aureus clones *

                                           Toxin genes always
agr type     ST       No. (%)                detected (100%)

agr1                 46 (9.8)
            ST8      25 (54.3)                lukPV, lukDE
            ST59      7 (15.2)                 lukPV, hlgv
            ST22      3 (6.5)             sem, seo, lukPV, hlg
           ST766      1 (2.2)             sem, seo, lukPV, hlg
           ST 377    10 (21.7)         lukPV, edinA/B/C, hlB, hlg
agr2                  9 (1.9)
            ST5       9 (100)         sem, seo, lukPV, lukED, hlgv
agr3                414 (88.3)
            ST80    357 (83.2)            etd, lukPV, edinA/B/C
            ST30     20 (4.8)             sem, seo, lukPV, hlg
            ST37      1 (0.2)        sec, sem, seo, tst, lukPV, hlg
            ST93       4 (1)                      lukPV
            ST1      32 (7.7)            lukPV, seh, lukDE, hlgv

agr type     ST       No. (%)      Toxin genes sometimes detected (%)

agr1                 46 (9.8)
            ST8      25 (54.3)    hlgv (95.8), sek (91.7), sed (16.7),
                                          seb (4.2), hlB (4.2)
            ST59     7 (15.2)            hlB (87.5), sek (87.5),
                                        seb (62.5), lukDE (12.5)
            ST22      3 (6.5)
           ST766      1 (2.2)
           ST 377    10 (21.7)
agr2                  9 (1.9)
            ST5       9 (100)               edinA/B/C (55.5)
agr3                414 (88.3)
            ST80    357 (83.2)    lukDE (99.7), hlgv (99.7), hlB (0.8)
            ST30     20 (4.8)             sek (5.0), tst (5.0)
            ST37      1 (0.2)
            ST93      4 (1)
            ST1      32 (7.7)      sea (78.1), sec (68.7), sek (68.7),
                                       seb (25.0), edinA/B/C (3.1)

* PVL, Panton-Valentine leukocidin; ST, sequence type; lukPV, PVL
genes; IukDE, LukE-lukD leukocidin genes; gamma (hlg), gamma variant
(hlgv), and [beta] (hlb) hemolysin genes; sea to see, seh, sem, seo,
staphylococcal enterotoxin type A to E, H, K, M, and O genes,
respectively; tst, toxic shock toxin gene; eta, etb, etd: exfoliative
toxin type A, B, and D genes, respectively; edinA/B/C, epidermal cell
differentiation inhibitor; agr, accessory gene regulator.
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Title Annotation:RESEARCH
Author:Etienne, Jerome
Publication:Emerging Infectious Diseases
Date:Apr 1, 2007
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