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Francisella tularensis in rodents, China.


A total of 420 rodents in China were examined for Francisella tularensis Francisella tu·la·ren·sis
n.
A bacterium of the genus Francisella that causes tularemia in humans.
 by polymerase chain reaction polymerase chain reaction (pŏl`ĭmərās') (PCR), laboratory process in which a particular DNA segment from a mixture of DNA chains is rapidly replicated, producing a large, readily analyzed sample of a piece of DNA; the process is . The infection rates were 4.76% in total, and 11.65%, 10.00%, 6.56%, 1.77%, and 0% in Jilin, Xinjiang, Heilongjiang, Inner Mongolia Inner Mongolia
 Chinese Nei Mongol or Nei-meng-ku

Autonomous region (pop., 2002 est.: 23,790,000), China. Stretching some 1,800 mi (2,900 km) across north-northeastern China, it has an area of 454,600 sq mi (1,177,500 sq km); its capital is Hohhot.
, and Zhejiang, respectively. Sequence analysis showed that all the detected agents belonged to F. tularensis subsD. holarctica.

**********

Tularemia tularemia (tlərē`mēə) or rabbit fever, acute, infectious disease caused by Francisella tularensis (Pasteurella tularensis).  is a disease caused by Francisella tularensis, a gram-negative, facultative intracellular bacterium. F. tularensis is generally believed to be confined to be in childbed.

See also: Confine
 to the Northern Hemisphere and has been reported in many American and Eurasian countries, for example, the United States United States, officially United States of America, republic (2005 est. pop. 295,734,000), 3,539,227 sq mi (9,166,598 sq km), North America. The United States is the world's third largest country in population and the fourth largest country in area. , Mexico, Canada, Japan, the former Soviet Union, Spain, Sweden, and Norway (1). Terrestrial and aquatic mammals such as ground squirrels, rabbits, hares, voles, and water rats
For the Australian TV series, see Water Rats (TV series).
For the animal, see Water Rat.
For the British charity, see Grand Order of Water Rats


"Water Rats"
 are animal reservoirs for transmission of F. tularensis to humans (2).

In China, F. tularensis was isolated in Daurian ground squirrels (Spermophilus dauricus) from Tongliao, Inner Mongolia Autonomous Region, in 1957. An outbreak of tularemia caused by contact with infected hares was first reported in Heilongjiang Province in 1959 (3). Thereafter, 6 cases were diagnosed in Qinghai Province in 1965 (4). Epidemiologic investigation identified several natural foci of the disease in Tibet from 1962 to 1972 and in Xinjiang Autonomous Region in 1986 (5,6), where F. tularensis was isolated from patients, Ixodes liberelis and Dermacentor marginatus ticks, and woolly hares (Lepus oiostolos). The latest outbreak occurred in 1986 at a food-processing factory in Shandong Province, where 31 of 36 workers who slaughtered hares became ill (7). Since then, no cases of F. tularensis infection have been reported in either humans or animal hosts. Whether the foci have become quiescent or the disease is underreported is unclear because tularemia is not a reportable disease re·port·a·ble disease
n.
See notifiable disease.
 in China. The objectives of this study were to investigate the presence of F. tularensis in rodents and to determine the subspecies subspecies, also called race, a genetically distinct geographical subunit of a species. See also classification.  type of the agent in China.

The Study

During the spring and summer seasons of 2004 and 2005, rodents were captured with baited snap traps at 5 sites (Figure): Inner Mongolia Autonomous Region, Heilongjiang Province, Jilin Province, Xinjiang Autonomous Region, and Zhejiang Province. The first 3 sites are forested highlands in northeastern China. The study site in Xinjiang Autonomous Region is grassland in northwestern China Northwestern China (西北, Xīběi) includes the autonomous regions of Xinjiang and Ningxia and the provinces of Shaanxi, Gansu, and Qinghai. See also
  • Ma clique
  • Tangut
. The study site in Zhejiang Province is wooded foothills in southern China.

After the species of the captured rodents was determined, a small piece of the spleen (500 mg) from each animal was used to extract DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
. Briefly, each spleen specimen was crushed with Trizol (Invitrogen, Carlsbad, CA, USA) to separate DNA from RNA RNA: see nucleic acid.
RNA
 in full ribonucleic acid

One of the two main types of nucleic acid (the other being DNA), which functions in cellular protein synthesis in all living cells and replaces DNA as the carrier of genetic
 after centrifugation Centrifugation

A mechanical method of separating immiscible liquids or solids from liquids by the application of centrifugal force. This force can be very great, and separations which proceed slowly by gravity can be speeded up enormously in centrifugal
, according to according to
prep.
1. As stated or indicated by; on the authority of: according to historians.

2. In keeping with: according to instructions.

3.
 the manufacturer's instructions. Nested polymerase chain reaction Nested polymerase chain reaction is a modification of polymerase chain reaction intended to reduce the contaminations in products due to the amplification of unexpected primer binding sites.  (PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
) that targeted the FopA gene of F. tularensis was first performed as described previously (8). To further identify the agents in the samples by nested PCR and determine their genotype, PCR using the primer pair of C1 and C4 was performed to amplify the ppI-helicase region of F. tularensis gene structure (9,10). Then the products were gel purified by using Qiaquick Gel Extraction In molecular biology, gel extraction or gel isolation is a technique used to isolate a desired fragment of intact DNA from an agarose gel following agarose gel electrophoresis.  Kit (Qiagen, Hilden, Germany) and sequenced with an automated DNA sequencer A DNA sequencer is an instrument used to automate the DNA sequencing process.

DNA sequencers have become more important due to large genomics projects and the need to increase productivity.
 (ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother.


(Application Binary Interface) A specification for a specific hardware platform combined with the operating system.
 Prism 377, Perkin-Elmer, Foster City, CA, USA). To minimize contamination, DNA extraction DNA extraction is a routine procedure to collect DNA for subsequent molecular or forensic analysis. Outline of a DNA extraction
There are three basic steps in a DNA extraction, the details of which may vary depending on the type of sample and any substances that may
, reagent setup, amplification, and agarose gel electrophoresis Agarose gel electrophoresis is a method used in biochemistry and molecular biology to separate DNA, RNA, or protein molecules by size. This is achieved by moving negatively charged nucleic acid molecules through an agarose matrix with an electric field (electrophoresis).  were performed in separate rooms.

Of 420 rodents tested by nested PCR, 20 were positive for the FopA gene of F. tularensis. The overall infection rate was 4.76% with a 95% confidence interval confidence interval,
n a statistical device used to determine the range within which an acceptable datum would fall. Confidence intervals are usually expressed in percentages, typically 95% or 99%.
 (CI) of 2.72%-6.78%. A total of 14 species of rodents were identified in the study. Seven species, including Apodemus peninsulae, A. agrarius, Cricetus migratorius, C. triton, Eutamias sibiricus, Meriones lybicus, and Clethrionomys rufocanus, were positive for F. tularensis (Table). Although E. sibiricus and M. lybicus were most likely to be infected, with positive rates of 25% and 22.2%, respectively, no significant difference in infection rate was found among the 7 positive rodent species ([chi square chi square (kī),
n a nonparametric statistic used with discrete data in the form of frequency count (nominal data) or percentages or proportions that can be reduced to frequencies.
] = 11.82, degrees of freedom [dj] = 6, p = 0.066).

The prevalence of F. tularensis in rodents varied with the geographic origin (Table). The infection rate was highest in rodents in Jilin Province (11.65%), followed by Xinjiang Autonomous Region (10.00%), Heilongjiang Province (6.54%), and Inner Mongolia Autonomous Region (1.76%). No F. tularensis infection was found in rodents collected from Zhejiang Province. The geographic difference in infection rate was significant ([chi square] = 20.91, df= 4, p = 0.0003). PCR assay, targeting the ppI-helicase region in combination with sequence analysis, identified F. tularensis in rodents in China as type B. The nucleotide sequences of the 20 positive specimens were identical to the published sequences of F. tularensis subsp, holarctica strain (GenBank accession no. AF247642.2).

Conclusions

This study is the first PCR-based study on F. tularensis infection in rodents in China. Heilongjiang Province, Inner Mongolia, and Xinjiang Autonomous Regions were recognized as the natural foci of tularemia [approximately equal to]40 years ago. The high prevalence of F. tularensis infection in rodents indicates that tularemia natural foci still exist in these areas. F. tularensis was detected for the first time in Jilin Province, which borders Heilongjiang Province and had similar landscape characteristics. Whether this newly described natural focus in Jilin Province is associated with human infection should be further investigated. In any case, this finding demonstrates that F. tularensis seems to be distributed more widely in China than expected. The extensive presence of F. tularensis indicates a potential threat to human health. The fact that rodents trapped from Zhejiang Province (southern China) were negative for the bacterium verifies our belief that F. tularensis is present only in northern China. The geographic variation in infection rate is likely attributable to the difference in biologic characteristics of each study site or a selection bias. Further studies are needed to clarify this question.

Rodents are efficient natural reservoirs for F. tularensis (2,11). In recent years, reports on human tularemia transmitted from small animals have been increasing (12). In this study, several rodent species were found to harbor F. tularensis, but which species are the main hosts in China is still unknown because no significant difference in infection rate was observed among rodents, regardless of their geographic origin. Systematic epidemiologic studies are required to investigate characteristics of natural foci and the role of both wild and domestic animals in transmission of F. tularensis to humans.

This work was supported by the National 973 Program of China (2002CB513201).

Dr Zhang is an epidemiologist in the Department of Epidemiology, Beijing Institute of Microbiology and Epidemiology, People's Republic of China. Her primary research interests are epidemiology and control of emerging and reemerging infectious diseases.

References

(1.) Tarnvik A., Berglund L. Tularemia. Eur Respir J. 2003;21:361-73.

(2.) Ellis J, Oyston PCF PCF - A simply typed, functional language.

["Fully Abstract Translations Between Functional Languages", J. Riecke, 18th POPL, pp. 245-254 (1991)].

["LCF Considered as a Programming Language", Theor CS 5:223, 1977].
, Green M. Tularemia. Clin Microbiol Rev. 2002;15:631-46.

(3.) Kang CG. An epidemiological investigation on the first epidemic of human tularemia in China. Chin J Epidemiol. 1980;1:248-51.

(4.) Zhu HJ, Wang WH, Zhou AQ. Six cases report of tularemia. Chin J Epidemiol. 1980;1:251-3.

(5.) Li L, Kou ZM. Preliminary study of tularemia in Ta-cheng District of the Xinjiang Uygur Autonomous Region. Chin J Epidemiol. 1985;6:20-2.

(6.) Guo CH, Zeng QG, Wang SC, Shi TF, Wu FL, Jia MH. Preliminary study of tularemia in Tibet Autonomous Region This article is about the administrative region of the People's Republic of China. For the historical/cultural region, see Tibet. For other uses, see Tibet (disambiguation). . Chin J Epidemiol. 1981;2:176-81.

(7.) Pen ZC, Gen YL, Xiao YT, Cheng BY. The investigation of the first outbreak of tularemia in Shandong Peninsula. Chin J Epidemiol. 1987;8:261-3.

(8.) Fulop M, Leslie D, Titball R. A rapid, highly sensitive method for the detection of Francisella tularensis in clinical samples using the polymerase chain reaction. Am J Trop Med Hyg. 1996;54:364-6.

(9.) Goethert HK, Shani I, Telford SR. Genotypic diversity of Francisella tularensis infecting Dermacentor variabilis Dermacentor var·i·a·bi·lis
n.
A tick that transmits tularemia and is the principal vector of Rocky Mountain spotted fever in the central and eastern US; the American dog tick.
 ticks on Martha's Vineyard, Massachusetts. J Clin Microbiol. 2004;42:4968-73.

(10.) Liu W, He J, Duan Q, Zhang PH, Zhao QM, Wu XM, et al. Genotyping of Francisella tularensis strains isolated from China by short-sequence tandem repeat region analysis. Chin J Microbiol Immunol. 2003;23:826-8.

(11.) Kortepeter MG, Parker GW. Potential biological weapons threats. Emerg Infect Dis. 1999;5:523-7.

(12.) Avashia SB, Petersen JM, Lindley CM, Schriefer ME, DeMarcus KL, Kim DK, et al. First reported prairie dog-to human tularemia transmission, Texas, 2002. Emerg Infect Dis. 2004;10:483-6.

Address for correspondence: Wu-Chun Cao, Beijing Institute of Microbiology and Epidemiology, State Key Laboratory of Pathogens and Biosecurity, 20 Dong-Da St, Fengtai District, Beijing 100071, People's Republic of China; email: caowc@nic.bmi.ac.cn

Fang Zhang, * Wei Liu, * May C. Chu, ([dagger]) Jun He,* Qing Duan, * Xiao-Ming Wu, * Pan-He Zhang,* Qiu-Min Zhao, * Hong Yang, * Zhong-Tao Xin, ([double dagger]) and Wu-Chun Cao *

* Beijing Institute of Microbiology and Epidemiology, Beijing, People's Republic ef China; ([dagger]) World Health Organization, Geneva Geneva, canton and city, Switzerland
Geneva (jənē`və), Fr. Genève, canton (1990 pop. 373,019), 109 sq mi (282 sq km), SW Switzerland, surrounding the southwest tip of the Lake of Geneva.
, Switzerland; and ([double dagger]) Beijing Institute of Basic Medical Sciences, Beijing, People's Republic of China
Table. Results of detection for Francisella tularensis in rodents by
species and qeoqraphic oriqin in China

                                  No. positive/no. detected (%)

                                                             Inner
Rodent species                Jilin        Heilongjiang     Mongolia

Apodemus peninsulae        9/43 (20.93)       0/129           0/5
A. agrarius                    0/24            0/12       2/36 (5.56)
Cricetus barabensis             --              --            0/5
Cricetus migratorius            --              --             --
Cricetus triton              1/5 (20)           --             --
Clethrionomys rutilus           --              --            0/13
Clethrionomys rufocanus        0/23        4/37 (10.81)       0/2
Rattus losea                    --              --             --
R. norvegicus                  0/1                            0/11
R. confucianus                  --              --             --
Mus musculus                 0/4 (0)            --             --
Microtus maximoviczii           --              --            0/35
Meriones lybicus                --              --             --
Eutamias sibiricus         2/3 (66.67)          --            0/6

Total                     12/103 (11.65)   4/61 (6.56)    2/113 (1.77)

                              No. positive/no. detected (%)

Rodent species            Xinjiang    Zhejiang       Total

Apodemus peninsulae          --          --        9/60 (15)
A. agrarius                  --          17       2/79 (2.5)
Cricetus barabensis          --          --           0/5
Cricetus migratorius      1/4 (25)    0/13 (0)    1/17 (5.88)
Cricetus triton              --          --        1/5 (20)
Clethrionomys rutilus        --          --          0/13
Clethrionomys rufocanus      --          --       4/62 (6.45)
Rattus losea                 --         0/30         0/30
R. norvegicus                0/1        0/3          0/16
R. confucianus               --         0/70         0/70
Mus musculus                0/11         --          0/15
Microtus maximoviczii        --          --          0/35
Meriones lybicus          1/4 (25)       --        1/4 (25)
Eutamias sibiricus           --          --       2/9 (22.22)

Total                     2/20 (10)    0/123     20/420 (4.76)

* --, no rodents captured.
COPYRIGHT 2006 U.S. National Center for Infectious Diseases
No portion of this article can be reproduced without the express written permission from the copyright holder.
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Title Annotation:DISPATCHES; infectious diseases research; includes statistical table
Author:Cao, Wu-Chun
Publication:Emerging Infectious Diseases
Geographic Code:9CHIN
Date:Jun 1, 2006
Words:1699
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