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Exposure to ultrafine particles from ambient air and oxidative stress-induced DNA damage.


Particulate matter particulate matter
n. Abbr. PM
Material suspended in the air in the form of minute solid particles or liquid droplets, especially when considered as an atmospheric pollutant.

Noun 1.
 (PM) in ambient air is an important risk factor for acute and long-term adverse effects related to pulmonary and cardiovascular diseases, cancer, and mortality (Pope and Dockery 2006). Traffic-related PM may be particularly relevant to these health effects, as indicated by studies on both acute and long-term effects (Hoek et al. 2002; Peters et al. 2004). The ultrafine particle (UFP UFP United Federation of Planets (Star Trek)
UFP Union des Forces Progressistes (French: Union of the Forces Progressists, Quebec provincial party)
UFP URL Filtering Protocol
) fraction of PM with a diameter of < 100 nm typically consists of "fresh" combustion emissions of which vehicle engines are the primary source in urban areas (Sioutas et al. 2005). For UFPs, the size, surface area, chemical composition, and ability to translocate trans·lo·cate
v.
1. To change from one place or one position to another; to displace.

2. To transfer a chromosomal segment to a new position; to cause to undergo translocation.
 through the epithelium of terminal bronchioles and alveoli Alveoli
Small air sacs or cavities in the lung that give the tissue a honeycomb appearance and expand its surface area for the exchange of oxygen and carbon dioxide.
 are thought to be important in relation to adverse health effects (Delfino et al. 2005; Oberdorster et al. 2005). The mechanisms of action of PM are thought to involve inflammation and oxidative stress oxidative stress,
n an imbalance of the prooxidant antioxidant ratio in which too few antioxidants are produced or ingested or too many oxidizing agents are produced.
, with small particles being more potent than larger particles because of their higher surface area and reactivity (Borm et al. 2004; Knaapen et al. 2004). Experimental studies in animals and cell cultures indicate that DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 can be oxidized oxidized

having been modified by the process of oxidation.


oxidized cellulose
see absorbable cellulose.
 by both [UFP.sub.s] and larger [PM.sup.10]; PM with aerodynamic diameter Drug particles for pulmonary delivery are typically characterized by aerodynamic diameter rather than geometric diameter. The velocity at which the drug settles is proportional to the aerodynamic diameter, da.  < 10 [micro]m) particle size modes (Knaapen et al. 2004; Risom et al. 2005). DNA damage has been studied mainly as DNA strand breaks (SBs) and guanine guanine (gwä`nēn), organic base of the purine family. It was reported (1846) to be in the guano of birds; later (1879–84) it was established as one of the major constituents of nucleic acids.  oxidation products. The oxidation of guanine studied is primarily 8-oxoguanine, which is mutagenic mutagenic

inducing genetic mutation.
 (Moriya 1993) and related to carcinogenesis car·ci·no·gen·e·sis
n.
The production of cancer.



carcinogenesis

production of cancer.


biological carcinogenesis
viruses and some parasites are capable of initiating neoplasia.
 (Loft and Moller 2006; Loft et al. 2006). Biomonitoring studies have shown associations between exposure to UFPs, [PM.sub.2.5] (PM with aerodynamic diameter < 2.5 [micro]m), and transition metals (both mass and content) in urban air and the level of oxidized guanine in DNA of peripheral blood peripheral blood Cardiology Blood circulating in the system/body  mononuclear mononuclear /mono·nu·cle·ar/ (-noo´kle-er)
1. having but one nucleus.

2. a cell having a single nucleus, especially a monocyte of the blood or tissues.


mon·o·nu·cle·ar
adj.
 cells (PBMC PBMC Peripheral Blood Mononuclear Cell .sub.s]) (Avogbe et al. 2005; Sorensen et al. 2003b, 2005b; Vinzents et al. 2005). However, these studies did not address the time course of DNA oxidation during exposure, identify responsible size modes or sources, or control confounding confounding

when the effects of two, or more, processes on results cannot be separated, the results are said to be confounded, a cause of bias in disease studies.


confounding factor
 from other air pollutants, including gases and volatile organic compounds volatile organic compound Environment Any toxic cabon-based (organic) substance that easily become vapors or gases–eg, solvents–paint thinners, lacquer thinner, degreasers, dry cleaning fluids .

Moreover, 8-oxoguanine is removed from DNA by (7),(8)-dihydro-8-oxoguanine-DNA glycosylase (OGG1), whereas the nucleoside nucleoside

Any of a class of organic compounds, including structural subunits of nucleic acids. Each consists of a molecule of a five-carbon sugar (ribose in RNA, deoxyribose in DNA) and a nitrogen-containing base, either a purine or a pyrimidine.
 diphosphate di·phos·phate
n.
An ester of phosphoric acid containing two phosphate groups.
 linked moiety moiety: see clan.  X-type motif 1 (NUDT NUDT National University of Defense Technology (Changsha, China) 1) enzyme removes 8-oxo-2'-deoxyguanosine 5'-triphosphate (8-oxo-dGTP) from the nucleotide pool, preventing incorporation of 8-oxoguanine during repair processes or replication (Loft and Mller 2006). Experimental studies indicate that acute exposure to PM induces DNA oxidation in target organs, whereas long-term exposure appears to increase the OGG1 repair activity and the oxidative stress response and defense enzyme heme oxygenase-1 (HO-1); this new steadystate situation during continued exposure may be associated with unchanged levels of DNA damage because of increased repair activity (Risom et al. 2003, 2005). If this situation also occurs in human cells, the actual ongoing oxidative stress and detrimental effects of PM may be underestimated by the levels of oxidatively damaged DNA in PBMCs.

Our objective in this study was to use carefully controlled exposure of healthy adults to real-life ambient air particles to delineate the relationship between source-specific particle size modes and oxidation in DNA of PBMCs. Physical exercise was included in the study to mimic real-life exposure because it increases the dose by an increase in the ventilation rate (Daigle et al. 2003), whereas the deposition rates of particles (12-320 nm) may be unaffected by exercise (Londahl et al. 2007). Chamber air was monitored continuously for size distribution, total particle numbers, and concentration of gases. DNA damage, assessed as SBs and oxidized guanines in [PBMC.sub.s], and OGG1 repair activity were determined by the comet assay, whereas mRNA expression was measured by realtime reverse transcriptase-polymerase chain reaction (RT-PCR RT-PCR

reverse transcriptase-polymerase chain reaction. See PCR1.
).

Materials and Methods

Study population. We invited volunteers to participate by posting a notice in a local newspaper and on campus at the University of Copenhagen The University of Copenhagen (Danish: Københavns Universitet) is the oldest and largest university and research institution in Denmark. . After preliminary screening we recruited 30 nonsmoking non·smok·ing  
adj.
1. Not engaging in the smoking of tobacco: nonsmoking passengers.

2. Designated or reserved for nonsmokers: the nonsmoking section of a restaurant.
, healthy volunteers with no personal history of cardiovascular disease. The sample size was based on prestudy considerations of statistical power. In our earlier studies we detected statistically significant associations between 24-and 48-hr cumulated personal exposure and levels of damaged DNA by repeated measurements in 15-50 volunteers (Sorensen et al. 2003a, 2003b; Vinzents et al. 2005).

Twenty-nine of the 30 volunteers completed the entire program. The participants consisted of 20 men and 9 women, 20-40 years of age (median age, 25 years), with normal lung function (baseline forced expiratory volume forced expiratory volume
n. Abbr. FEV
The maximum volume of air that can be expired from the lungs in a specific time interval when starting from maximum inspiration.
 in 1 sec: 4.53 [+ or -] 0.8 L) and a mean body mass index of 23.0 [95% confidence interval confidence interval,
n a statistical device used to determine the range within which an acceptable datum would fall. Confidence intervals are usually expressed in percentages, typically 95% or 99%.
 (CI), 22-24]. Participants were taking no medications other than contraception (5 women) and vitamin/mineral supplements (10 participants).

The study was approved by the local ethics committee ethics committee A multidisciplinary hospital body composed of a broad spectrum of personnel–eg, physicians, nurses, social workers, priests, and others, which addresses the moral and ethical issues within the hospital. See DNR, Institutional review board.  and in accordance with the Declaration of Helsinki For the political accords, see .
. There is also another Declaration of Helsinki, dealing with the Information Society.[1] Introduction
The Declaration of Helsinki,[2] was developed by the World Medical Association[3]
. All participants gave written, informed consent before the study commenced.

Study design. We used a single blind twofactor cross-over study design with randomized ran·dom·ize  
tr.v. ran·dom·ized, ran·dom·iz·ing, ran·dom·iz·es
To make random in arrangement, especially in order to control the variables in an experiment.
 exposure to particles and/or cycling scenarios. Each participant was his/her own control, which excluded confounding by factors that are stable within an individual over time but vary between participants. To avoid a diurnal diurnal /di·ur·nal/ (di-er´nal) pertaining to or occurring during the daytime, or period of light.

di·ur·nal
adj.
1. Having a 24-hour period or cycle; daily.

2.
 effect, participants entered the exposure chamber at the same time of the morning on each visit at either 0700 or 0730 hours and stayed for the following 24 hr. The exposure chambers were small offices with a volume of 30 [m.sup.3]. Two exposure scenarios were simulated by pumping either nonfiltered air (NFA NFA - Finite State Machine ) with UFP-or particlefiltered air (PFA PFA Pacific Film Archive
PFA Professional Footballers Association
PFA Paraformaldehyde
PFA Predictive Failure Analysis
PFA Perfluoroalkoxy
PFA Protection From Abuse
PFA Parent-Faculty Association
PFA Popular Flying Association
) into the chambers located on the fifth floor above one of Copenhagen's busiest roads (Tagensvej). This road consists of three vehicle laneways and a busway. The traffic density on Tagensvej in 2005 was 49,200 vehicles/ 24 hr (weekdays), including 4-6% heavy duty vehicles > 3.5 tons) such as buses, lorries, and larger vans (Municipality of Copenhagen 2006). Outdoor air was pumped directly into the chamber using a KVR-100 channel ventilator ([EMPTY SET]land A/S, Ballerup, Denmark) (230 [m.sup.3]/hr, P = 100 Pa) giving continuous air exchange. A heating device kept the air at room temperature. For the particle-free environment a Camfil FARR HEPA HEPA  
abbr.
1. high-efficiency particulate air

2. high-efficiency particulate arresting
 filter (226002A1; Camfil A/S, Stockholm, Sweden) was inserted in-line downstream of the ventilator. Gases including nitrogen oxides [NO.sub.x] NO + nitric oxide nitric oxide or nitrogen monoxide, a colorless gas formed by the combustion of nitrogen and oxygen as given by the reaction: energy + N2 + O2 → 2NO; m.p. −163.6°C;; b.p. −151.8°C;.  [NO.sub.2]], ozone [O.sub.3], and carbon monoxide carbon monoxide, chemical compound, CO, a colorless, odorless, tasteless, extremely poisonous gas that is less dense than air under ordinary conditions. It is very slightly soluble in water and burns in air with a characteristic blue flame, producing carbon dioxide;  (CO) were present in both exposure scenarios and continuously monitored. Each exposure scenario included two episodes of 90-min physical exercise on an ergometer ergometer /er·gom·e·ter/ (er-gom´e-ter) a dynamometer.

bicycle ergometer  an apparatus for measuring the muscular, metabolic, and respiratory effects of exercise.
 bicycle after an exposure time of 1 and 8 hr, respectively. The intensity was controlled by a heart rate monitor (Polar S720i; Polar Electro ApS, Holte, Denmark) and participants worked at 65-75% of their maximal heart rate defined as 220 beats per minute beats per minute Cardiac pacing The unit of measure for the frequency of heart depolarizations or contractions each minute–or pulse rate  minus age in years.

All measurements were completed within a 5-month period beginning in February 2005. The median interval between individual exposures for each participant was 12 days. Each volunteer was allowed to leave the chamber to visit the bathroom, kitchen, or for measurement of lung function (not reported here). The median 24-hr period outside the chamber for these visits was 99 min. Data on individual diet throughout the study were obtained from self-administered food frequency questionnaires. Blood was sampled after 6 and 24 hr of exposure. Eight blood samples were lost during the study.

Peripheral mononuclear blood cell separation. [PBMC.sub.s] were collected and isolated in Vacutainer Cell Preparation Tubes (CPT CPT

See: Carriage Paid To
; Vacutainer Systems, Plymouth, UK) according to the manufacturer's instructions and frozen at -80[degress]C in a mixture containing 50% fetal bovine serum Fetal bovine serum ( or foetal bovine serum) is serum taken from the fetuses of cows. Fetal Bovine Serum (or FBS) is the most widely used serum in the culturing of cells. In some papers the expression foetal calf serum is used.  (FBS FBS
abbr.
fasting blood sugar


FBS Fasting blood sugar. See Fasting glucose.
; GibcoRBL, Renfrewshire, UK), 40% culture medium (RPMI RPMI Rapid Prototyping & Manufacturing Institute
RPMI Roswell Park Memorial Institute
RPMI Royal Park Memorial Institute (culture medium) 
 1640; GibcoRBL), and 10% dimethylsulfoxide di·meth·yl·sulf·ox·ide
n.
DMSO.
 (DMSO DMSO dimethyl sulfoxide.

DMSO
n.
Dimethyl sulfoxide; a colorless hygroscopic liquid obtained from lignin, used as a penetrant to convey medications into the tissues.


DMSO,
n.
).

DNA damage measured by the Comet assay. The levels of SBs and formamidopyrimidine DNA glycolase (FPG FPG Fasting plasma glucose, see there ) sites were detected by single cell gel electrophoresis (Comet assay), including incubation with buffer and FPG enzyme for detection of SBs and oxidized purines in PBMCs as previously described (Moller 2005; Vinzents et al. 2005). This assay has been validated in an interlaboratory trial [European Standards Committee on Oxidative DNA damage (ESCODD) 2003]. Coded samples from each participant were analyzed in the same batch along with a quality control PBMC sample. The score of 100 comets per slide with a five-class scoring system (arbitrary score range: 0-400) was translated into lesions per [10.sup.6] bp by means of a calibration curve based on induction of SBs by X ray, which has a known yield (ESCODD 2003; Moller et al. 2004). We used a conversion factor of 0.0261 Gy equivalents per score and the assumption that a human diploid cell contains 4 X [10.sup.12] Da DNA, corresponding to 6 x [10.sup.9] bp.

Measurement of OGG1 activity. The repair activity of PBMCs was determined as the incision activity of substrate DNA treated with Ro19-8022/white light, which generates 8-oxoguanine (Collins 2004; Collins et al. 2001). We introduced oxidized bases into PBMC substrate nuclei by irradiating cells in phosphate-buffered saline solution saline solution
n.
A solution of any salt, usually an isotonic sodium chloride solution. Also called salt solution.


Saline solution
A solution of sterile water and salt used in a variety of medical procedures.
 with 1 [micro]M Ro 19-8022 (Hoffman-LaRoche, Basel, Switzerland) at 0[degress]C. The cells were washed and resuspended in a mixture containing 50% fetal bovine serum, 40% culture medium, and 10% DMSO, (3 x [10.sup.6] cells/mL) and frozen at -80[degress]C.

For the preparation of PBMC extracts, the cells were centrifuged (300 x g, 5 min, 4[degress]C), and the pellet was resuspended in buffer A (45 mM HEPES HEPES N-2-Hydroxyethylpiperazine-N'-2-Ethanesulfonic Acid , 0.4 M KCl, 1 mM EDTA EDTA: see chelating agents. , 0.1 mM dithiothreitol, 10% glycerol glycerol, glycerin, glycerine, or 1,2,3-propanetriol (prō`pāntrī'ŏl), CH2OHCHOHCH2OH, colorless, odorless, sweet-tasting, syrupy liquid. , pH 7.8) at a volume of 20 [micro]L per [10.sup.6] cells. The resuspended cells were divided in aliquots of 50 [micro]L to which 12 [micro]L 1% Triton X-100 was added. The lysate ly·sate
n.
The cellular debris and fluid produced by lysis.
 was centrifuged (700 x g, 5 min, 4[degress]C), and the supernatant supernatant /su·per·na·tant/ (-na´tant) the liquid lying above a layer of precipitated insoluble material.

supernatant

the liquid lying above a layer of precipitated insoluble material.
 was mixed with 200 [micro]L buffer B (40 mM HEPES, 0.1 M KCl, 0.5 mM [NA.sub.2]EDTA, 0.2 mM bovine serum albumin serum albumin
n.
See seralbumin.
, pH 8). Approximately 3 x [10.sup.4] substrate cells were embedded in agarose agarose

more highly purified form of agar with similar uses to agar and widely used in the separation of nucleic acid fragments.
 and lysed as described for the Comet assay. Repair incisions were detected by incubation of the agarose-embedded nuclei with 60 [micro]L PBMC extract or buffer B for 20 min at 37[degress]C. The subsequent alkaline treatment and electrophoresis were identical to the conditions used to determine DNA damage using the Comet assay (Vinzents et al. 2005). The level of repair incisions was obtained as the difference in scores of parallel slides incubated with and without PBMC extract. An assaycontrol (PBMC) was included in each electrophoresis run.

Expression levels of HO-1, OGG1, and NUDT1 mRNA by real-time RT-PCR. The PBMCs were isolated in Vacutainer tubes and cryopreserved in TRIzol reagent (Invitrogen, A/S, Taastrup, Denmark) at -80[degress]C. On the day of analysis the samples were thawed rapidly, and the RNA RNA: see nucleic acid.
RNA
 in full ribonucleic acid

One of the two main types of nucleic acid (the other being DNA), which functions in cellular protein synthesis in all living cells and replaces DNA as the carrier of genetic
 was extracted according to the manufacturer's instructions. Approximately 0.4 [micro]g RNA was used for cDNA synthesis in a reaction volume of 20 [micro]L using the TaqMan GeneAmp RT-PCR kit as recommended by Applied Biosystems (Naerum, Denmark). Quantative PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
 reactions were carried out in ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother.


(Application Binary Interface) A specification for a specific hardware platform combined with the operating system.
 PRISM 7900HT (Applied Biosystems), using primers and cDNA-specific probes purchased from Applied Biosystems. We used as the reference gene 18S rRNA, which is commercially available as a probe and primer solution (Eukaryotic eukaryotic /eu·kary·ot·ic/ (u?kar-e-ot´ik) pertaining to a eukaryon or to a eukaryote.

eukaryotic

pertaining to eukaryosis.


eukaryotic cells
see cell.
 18S rRNA Endogenous Control, 4352930E; Applied Biosystems). Below are probes and primers for the genes. Sequence accession ID numbers are from GenBank (http://www.ncbi.nlm.nih. gov/Genbank/; accessed 12 February 2007):

hHO-1: forward primer: 5-CAT GAG GAA GAA Goals Against Average (Hockey)
GAA Gaelic Athletic Association
GAA Gravure Association of America (Rochester, NY)
GAA German Agro Action
GAA Global Aquaculture Alliance
GAA Gay Activists Alliance
 CTT CTT Correios (Portuguese Postal Service)
CTT Certified Technical Trainer
CTT Charity Technology Trust
CTT Cholesterol Treatment Trialists' (collaboration)
CTT Common Task Training
 TCA TCA

1. trichloroacetic acid.

2. tricarboxylic acid cycle (Krebs cycle).

TCA Tricyclic antidepressant, see there
 GAA GGG GGG German Goo Girls (pornography website)
GGG Giggle (email, USENET, chat slang)
GGG Gadolinium Gallium Garnet
GGG Gimme Gimme Gimme (TV show) 
 C-3; reverse primer: GAT GTG (chat) gtg - Got to go. The user is about to stop chatting.  GTA GTA Grand Theft Auto (legal)
GTA Grand Theft Auto (video game)
GTA Greater Toronto Area (Canada)
GTA Graduate Teaching Assistant
 CAG CAG 1 Chronic atrophic gastritis 2 Coronary angiography, see there  GGA GGA Generalized Gradient Approximation
GGA Good Game All
ggA Geschützte Geographische Angabe (German: Protected Geographical Indication)
GGA Global Gecko Association
GGA Georgia Geocachers Association
 GGC GGC Girl Guides of Canada
GGC Greenwood Genetic Center (South Carolina)
GGC Gwasanaeth Gwaed Cymru (Welsh Blood Service)
GGC Generalized Goppa Code
GGC Grosvenor Gallery Company
 CAT-3; TaqMan probe: 5-6-FAM-TGA CCC CCC

A very speculative grade assigned to a debt obligation by a rating agency. Such a rating indicates default or considerable doubt that interest will be paid or principal repaid. Also called Caa.
 GAG ACG ACG American College of Gastroenterology; angiocardiography; apexcardiogram.
AcG accelerator globulin (coagulation factor V).

AcG

accelerator globulin (clotting factor V).
 GCT (programming, tool) GCT - A test-coverage tool by Brian Marick <marick@testing.com>, based on GNU C. Version 1.4 was ported to Sun-3, Sun-4, RS/6000, 68000, 88000, HP-PA, IBM 3090, Ultrix, Convex, SCO but not Linux, Solaris, or Microsoft Windows.  TCA AGC AGC Automatic Gain Control
AGC Automotive Glass Cartridge (fuse)
AGC Associated General Contractors
AGC Associated General Contractors of America
AGC Atypical Glandular Cells
AGC Attorney-General's Chambers
 AGC TG-TAMRA-3 (NM_002133).

hOGG1: forward primer: 5-AAA TTC TTC Trying To Conceive
TTC Toronto Transit Commission
TTC Trans Texas Corridor
TTC Toutes Taxes Comprises (French)
TTC Trident Technical College (North Charleston, SC)
TTC Temporary Traffic Control
 CAA Caa

See CCC.
 GGT GGT

?-glutamyl transferase.

GGT Gammaglutamyltransferase, see there
 GTG CGA (Color/Graphics Adapter) The first video display standard for the IBM PC. This low-resolution system was superseded by EGA and then VGA. CGA required a digital RGB Color Display monitor. See PC display modes.

CGA - Color Graphics Adapter
 CTG-3; reverse primer: 5-GCG ATG ATG antithymocyte globulin.
lymphocyte immune globulin (antithymocyte globulin equine, ATG, ATG equine, LIG)

Atgam

Pharmacologic class: Immunoglobulin

Therapeutic class: Immunosuppressant
 TTG tTG Tissue Transglutaminase
TTG Telltale Games (website)
TTG TiVo To Go
TTG Time-To-Go
TTG Tonalite-Trondhjemite-Granodiorite
TTG Tea Tree Gully (South Australia)
TTG Tom Tom Go
 TTG TTG GAG GA-3; TaqMan probe: 5-6-FAM-CAA GAC GAC Great American Country
GAC Global Assembly Cache (Microsoft .NET)
GAC Global Assembly Cache
GAC Granular Activated Carbon
GAC Gustavus Adolphus College (St.
 CCC ATC ATC Air Traffic Control
ATC Average Total Cost
ATC Certified Athletic Trainer
ATC At the Center (Hartford, Maine retreat center)
ATC Applied Technology Council
ATC All Things Considered
 GAA TGC TGC The Golf Channel
TGC The Game Creators (forum)
TGC Trading Card Game
TGC Time-Gain Compensation
TGC The Gungan Council
TGC The Golden Compass (Phillip Pullman book)
TGC Take Good Care
 CTT TTC TCT TCT The Capital Times (Madison, WI newspaper)
TCT Transcatheter Cardiovascular Therapeutics
TCT The Coroner's Toolkit
TCT Trans Canada Trail
TCT Tcl Core Team
TCT Tsukuba College of Technology (Japan) 
 TTTAMRA-3 (U96710).

hNUDT1: forward primer: 5-CAT CGA GGA TGG TGG The Great Gatsby (novel F. Scott Fitzgerald; movie)
TGG Kuala Terengganu, Malaysia - Sultan Mahmood (Airport Code)
TGG Temporary Geographic Grid
TGG Third Generation Gyro
TGG Triple Graph Grammar
 GGC TAG-3; reverse primer: CAG AAG AAG Association of American Geographers (Washington, DC)
AAG Assistant Attorney General
AAG Asociación Argentina de Golf
AAG Anti-Aircraft Gun
AAG Assistant Adjutant General
AAG Australian Association of Gerontology
 ACA ACA - Application Control Architecture  TGC ACG TCC TCC The Car Connection (web site)
TCC Tidewater Community College
TCC Tallahassee Community College
TCC Temporary Continuation of Coverage
TCC Tucson Convention Center (Tucson, AZ, USA) 
 ATG A-3; TaqMan probe: 5-6-FAM-TCG CCC ACG AAC (Advanced Audio Coding) An audio compression technology that is part of the MPEG-2 and MPEG-4 standards. AAC, especially MPEG-4 AAC, provides greater compression and better sound quality than MP3, which also came out of the MPEG standard.  TCA AAC ACG ATC T-TAMRA-3 (D16581).

We performed the PCR reactions in triplicate using TaqMan Fast Universal PCR Master Mix (Applied Biosystems) according to the manufacturer's protocol. For the PCR reaction the following protocol was used: activation of TAQ polymerase for 20 sec at 95[degress]C, followed by a total of 45 temperature cycles for 0.01 sec. at 95[degress]C and 20 sec at 60[degress]C. In each run a standard was included and verified on the efficiency plot, and the variation coefficients of the repeated measurements were 2.98%.

Size distribution, concentration, and elemental composition of PM. In the exposure chambers, the size distribution and number concentration (NC) of fine particles (6-700 nm) were continuously monitored using a custom-built differential mobility particle sizer (Wahlin et al. 2001), whereas concentrations of [O.sub.3], NO, [No.sub.2], and CO were measured continuously using monitors from Teledyne API (Advanced Pollution Instrumentation (Teledyne, San Diego, CA, USA). NFAcumulated 24-hr particle samples were collected using dichotomous di·chot·o·mous  
adj.
1. Divided or dividing into two parts or classifications.

2. Characterized by dichotomy.



di·chot
 stacked filter units (Luhana et al. 2001) as fine (< 2.5 [micro]m diameter) and coarse fractions ([10.sup.-2.5] [micro]m diameter). Sampling filters were polycarbonate A category of plastic materials used to make a myriad of products, including CDs and CD-ROMs.  membrane filters (Nucleopore Costar Corp., Cambridge, MA, USA). We determined particle mass in NFA gravimetrically and elemental composition using proton induced X-ray emission as previously described (Wahlin et al. 2006). Filter-based measurements were not performed on PFA because of the low particle levels.

Outdoor levels of UFPs and gases were also measured at fixed monitoring stations. The first was located on the roof of the 20-m high H.C. orsteds campus building (considered background) at the University of Copenhagen in a park area in the center of Copenhagen, approximately 300 m from Tagensvej. The second was located on the curb of H.C. Andersen's Boulevard (busy street), which has 60,000 vehicles per workday (Kemp et al. 2006).

We calculated particle aerodynamic surface areas and volumes (V) by integrating with respect to particle NC and using particle diameters d. The following integrals were used: area = [integral][pi] [d.sup.2] X dNC and V = 1/6 [integral][pi]?[d.sup.3] X dNC.

Results of size distribution and NC of particles from 6-700 nm in diameter were fitted using four log-normal modes, [NC.sup.12] (median diameter 11.7 nm, geometric width 1.24), [NC.sup.23] (22.6 nm, 1.48), [NC.sup.57] (57.1 nm, 1.96), and [NC.sup.212] (212 nm, 1.72), where the functional dependence of the modes on d was defined by Equation 1:

exp (- logd - [logd.sub.m] log/2[(log[sigma]).sup.2]). [1]

The first three modes represent the characteristic traffic particle modes that have been observed in busy streets in Copenhagen (Wahlin et al. 2004). The last mode represents secondary long-range transport and a large fraction of particle mass.

Finally, when volunteers were outside the chambers (median, 99 min/24 hr), each carried a Condensed con·dense  
v. con·densed, con·dens·ing, con·dens·es

v.tr.
1. To reduce the volume or compass of.

2. To make more concise; abridge or shorten.

3. Physics
a.
 Particle Counter (TSI TSI Total Solar Irradiance (sum solar light in energy per unit of time)
TSI Trading Standards Institute (UK)
TSI Transportation Safety Institute (US DOT) 
 3007; TSI Inc., St. Paul, MN, USA). These instruments monitored [NC.sup.total] (10-700 nm), with total exposure concentrations adjusted for these periods.

Statistical strategy. We investigated the effect of exposure on the outcome variables SBs, FPG sites, mRNA expression of DNA repair genes, and OGG1 repair activity using mixed-effects models by the PROC (language) PROC - The job control language used in the Pick operating system.

["Exploring the Pick Operating System", J.E. Sisk et al, Hayden 1986].
 MIXED procedure of SAS (1) (SAS Institute Inc., Cary, NC, www.sas.com) A software company that specializes in data warehousing and decision support software based on the SAS System. Founded in 1976, SAS is one of the world's largest privately held software companies. See SAS System.  (version 8.2; SAS Institute Inc., Cary, NC, USA). Subject nested within gender was included as a random factor variable to account for interindividual variation. Exposure in terms of presence or absence of particle filter in the air inlet, length of exposure (6 and 24 hr), performance of exercise as well as use of contraceptive pills and consumption of multivitamin mul·ti·vi·ta·min
adj.
Containing many vitamins.

n.
A preparation containing many vitamins.


multivitamin 
 supplements were included as categorical explanatory variables. Consumption amounts of fruit and vegetables (grams per day) were included as continuous variables. Subsequently, we investigated dose-response relationships related to exposure in terms of the average NC of particles within each of the four size modes, with mean diameters of (12), (23), (57), and 212 nm. Effects of each of the four size modes were investigated by mutual adjustment with inclusion of all as continuous variables simultaneously in the model. Finally, we estimated effects of exposure adjusted for possible confounding by including length of exposure and exercise as categorical variables and [O.sub.3], CO, [NO.sub.x], and age as continuous variables. The distributions of the exposure concentrations, the DNA damage, and mRNA expression were skewed skewed

curve of a usually unimodal distribution with one tail drawn out more than the other and the median will lie above or below the mean.

skewed Epidemiology adjective Referring to an asymmetrical distribution of a population or of data
; therefore all statistical analyses were performed on the natural logarithm Natural logarithm

Logarithm to the base e (approximately 2.7183).
 of these data, with model estimates representing slopes on the logarithmic scale. Significant differences between concentrations of NC, and gaseous parameters [O.sub.3], NO, [NO.sub.x], and CO) according to the two exposure scenarios were determined by a t-test. In all analyses, p < 0.05 was considered to be statistically significant.

Results

Exposure characterization. Table 1 summarizes levels and size distribution of PM and levels of gases during the two different exposure scenarios and during the corresponding period at nearby monitoring stations at a busy street and in an urban background. The 24-hr total NC ranged from 91-542/[cm.sup.3] and 6,169-15,362/[cm.sub.3] for PFA and NFA, respectively. The filter effectively removed particles assessed by all variables (all p < 0.01, t-test). [NO.sub.x] and NO were unaffected by removal of PM by filtering the air, whereas [O.sub.3] was significantly (p < 0.01, t-test) reduced (possibly because of a reaction with the filter material) and CO significantly increased (p = 0.04, t-test). During the NFA scenario the levels of PM and gases in the chambers resembled the composition of urban background air with penetration and mixing with busy street air. The daily 24-hr average of [NC.sub.total] was resolved in four size modes (Figure 1). [NC.sub.57] was the most abundant and also represented the major part of the surface area in both indoor and outdoor (background and urban) air (Table 1). Finally, the chemical composition of air during the NFA exposure scenario (Table 2) shows that the [PM.sub.2.5] fraction was rich in sulfur, which is consistent with substantial contributions from long-range transport. This fraction was also rich in metals and carried relatively high concentrations of transition metals (vanadium vanadium (vənā`dēəm), metallic chemical element; symbol V; at. no. 23; at. wt. 50.9415; m.p. about 1,890°C;; b.p. 3,380°C;; sp. gr. about 6 at 20°C;; valence +2, +3, +4, or +5. Vanadium is a soft, ductile, silver-grey metal. , chromium, iron, copper).
Table 1. Total and size mode allocated number concentrations (NC),
surface area, and volume of particles (aerodynamic diameter, 6-700 nm)
as well as gases. (a)

                                                  Exposure
                                                   chamber

                                                     NFA

[NC.sub.total] (no./[cm.sup.3])                        10,067
                                               (6,169-15,362)

[NC.sub.12] (no./[cm.sup.3]) (b)                        1,187
                                                  (521-1,320)

[NC.sub.23] (no./[cm.sup.3]l) (c)                       2,891
                                                (1,978-4,356)

[NC.sub.57] (no./[cm.sup.3])d                           6,136
                                                (4,629-8,345)

[NC.sub.212] (no./[cm.sup.3]) (e)               226 (121-376)

[Area.sub.total]                                193 (163-308)
([micro][m.sup.2]/[cm.sup.3])

[Area.sub.12] ([micro][m.sup.2]/[cm.sup.3])              0.56
                                                  (0.25-0.63)

[Area.sub.23] ([micro][m.sup.2]/[cm.sup.3])              6.30
                                                  (4.31-9.49)

[Area.sub.57] ([micro][m.sup.2]/[cm.sup.3])     156 (117-212)

[Area.sub.212] ([micro]m.sup.2]/[cm.sup.3])        57 (31-95)

Volumetotal ([micro][m.sup.3]/[cm.sup.3])            6 (5-11)

[Volume.sub.12] ([micro][m.sup.3]/[cm.sup.3])            0.00
                                                  (0.00-0.00)

[Volume.sub.23] ([micro][m.sup.3]/[cm.sup.3])            0.03
                                                  (0.02-0.05)

[Volume.sub.57] ([micro][m.sup.3]/[cm.sup.3])   4.6 (3.5-6.3)

[Volume.sub.212]([micro][m.sup.3]/[cm.sup.3])   4.2 (2.3-7.0)

[NO.sub.x] (ppb)                                        25.83
                                                (13.01-49.56)

NO (ppb)                                                 3.24
                                                 (0.72-14.49)

CO (ppm)                                                 0.35
                                                  (0.25-0.49)

[O.sub.3] (ppb)                                         12.08
                                                 (5.68-18.85)

                                                 Exposure
                                                  chamber

                                                    PFA

[NC.sub.total] (no./[cm.sup.3])                 235 (91-542)

[NC.sub.12] (no./[cm.sup.3]) (b)                   15 (5-91)

[NC.sub.23] (no./[cm.sup.3]l) (c)                89 (25-134)

[NC.sub.57] (no./[cm.sup.3])d                  166 (107-314)

[NC.sub.212] (no./[cm.sup.3]) (e)                   8 (5-14)

[Area.sub.total]                                    7 (4-12)
([micro][m.sup.2]/[cm.sup.3])

[Area.sub.12] ([micro][m.sup.2]/[cm.sup.3])             0.01
                                                 (0.00-0.04)

[Area.sub.23] ([micro][m.sup.2]/[cm.sup.3])             0.19
                                                 (0.05-0.29)

[Area.sub.57] ([micro][m.sup.2]/[cm.sup.3])    4.2 (2.7-8.0)

[Area.sub.212] ([micro]m.sup.2]/[cm.sup.3])    2.0 (1.3-3.6)

Volumetotal ([micro][m.sup.3]/[cm.sup.3])      0.3 (0.2-0.4)

[Volume.sub.12] ([micro][m.sup.3]/[cm.sup.3])           0.00
                                                 (0.00-0.00)

[Volume.sub.23] ([micro][m.sup.3]/[cm.sup.3])           0.00
                                                 (0.00-0.00)

[Volume.sub.57] ([micro][m.sup.3]/[cm.sup.3])           0.13
                                                 (0.08-0.24)

[Volume.sub.212]([micro][m.sup.3]/[cm.sup.3])           0.15
                                                 (0.09-0.26)

[NO.sub.x] (ppb)                                       28.03
                                               (14.43-52.56)

NO (ppb)                                                3.21
                                                (0.72-17.42)

CO (ppm)                                                0.41
                                                 (0.28-0.57)

[O.sub.3] (ppb)                                         4.29
                                                (1.99-10.49)

                                                  Outdoor
                                                 monitoring
                                                 stations

                                                   Urban
                                                 background

[NC.sub.total] (no./[cm.sup.3])                        6,571
                                               (4,530-9,645)

[NC.sub.12] (no./[cm.sup.3]) (b)                191 (35-484)

[NC.sub.23] (no./[cm.sup.3]l) (c)                        931
                                                 (169-2,090)

[NC.sub.57] (no./[cm.sup.3])d                          4,516
                                               (3,096-6,848)

[NC.sub.212] (no./[cm.sup.3]) (e)               177 (34-467)

[Area.sub.total]                                157 (99-278)
([micro][m.sup.2]/[cm.sup.3])

[Area.sub.12] ([micro][m.sup.2]/[cm.sup.3])             0.09
                                                 (0.02-0.23)

[Area.sub.23] ([micro][m.sup.2]/[cm.sup.3])             2.03
                                                 (0.37-4.55)

[Area.sub.57] ([micro][m.sup.2]/[cm.sup.3])     115 (79-174)

[Area.sub.212] ([micro]m.sup.2]/[cm.sup.3])       45 (9-119)

Volumetotal ([micro][m.sup.3]/[cm.sup.3])           5 (3-11)

[Volume.sub.12] ([micro][m.sup.3]/[cm.sup.3])           0.00
                                                 (0.00-0.00)

[Volume.sub.23] ([micro][m.sup.3]/[cm.sup.3])           0.01
                                                 (0.00-0.02)

[Volume.sub.57] ([micro][m.sup.3]/[cm.sup.3])  3.4 (2.3-5.2)

[Volume.sub.212]([micro][m.sup.3]/[cm.sup.3])  3.3 (0.6-8.7)

[NO.sub.x] (ppb)                                       11.56
                                                (7.43-18.36)

NO (ppb)                                                1.22
                                                 (0.41-3.05)

CO (ppm)                                                0.21
                                                 (0.17-0.29)

[O.sub.3] (ppb)                                        30.05
                                               (23.24-35.27)

                                                   Outdoor
                                                 monitoring
                                                   stations

                                                 Busy urban
                                                   street

[NC.sub.total] (no./[cm.sup.3])                         22,809
                                               (13,499-31,977)

[NC.sub.12] (no./[cm.sup.3]) (b)                         1,692
                                                    (774-2970)

[NC.sub.23] (no./[cm.sup.3]l) (c)                        7,759
                                                (3,537-13,413)

[NC.sub.57] (no./[cm.sup.3])d                           10,115
                                                (6,713-14,950)

[NC.sub.212] (no./[cm.sup.3]) (e)                296 (104-626)

[Area.sub.total]                                 361 (249-541)
([micro][m.sup.2]/[cm.sup.3])

[Area.sub.12] ([micro][m.sup.2]/[cm.sup.3])               0.80
                                                   (0.37-1.41)

[Area.sub.23] ([micro][m.sup.2]/[cm.sup.3])              16.91
                                                  (7.71-29.23)

[Area.sub.57] ([micro][m.sup.2]/[cm.sup.3])      257 (171-380)

[Area.sub.212] ([micro]m.sup.2]/[cm.sup.3])        75 (26-159)

Volumetotal ([micro][m.sup.3]/[cm.sup.3])            12 (8-19)

[Volume.sub.12] ([micro][m.sup.3]/[cm.sup.3])             0.00
                                                   (0.00-0.00)

[Volume.sub.23] ([micro][m.sup.3]/[cm.sup.3])             0.09
                                                   (0.04-0.16)

[Volume.sub.57] ([micro][m.sup.3]/[cm.sup.3])  7.6 (5.1-11.26)

[Volume.sub.212]([micro][m.sup.3]/[cm.sup.3])   5.5 (1.9-11.7)

[NO.sub.x] (ppb)                                         59.52
                                                 (37.94-88.17)

NO (ppb)                                                    --

CO (ppm)                                                  0.55
                                                   (0.39-0.76)

[O.sub.3] (ppb)                                          19.52
                                                 (11.88-26.67)

(a) Values are median (interquartile range) of 24-hr average exposure
scenarios and outdoor monitoring data. (b) Nucleation mode of vehicle
exhaust system sulfur compounds with low vapor pressure and a median
aerodynamic diameter of 11.7 nm. (c) Nucleation mode of volatile
organic compounds with a median aerodynamic diameter of 22.6 nm.
(d) Size mode with a median aerodynamic diameter of 57.1 nm and found
mainly in soot. (e) Secondary long-range transported particles with a
median aerodynamic diameter of 212 nm.
Table 2. Particle mass [median (interquartile range)] and chemical
composition (ng/[m.sup.3]) of particles in the exposure chamber air
without filtering.

Exposure chamber  Total mass
PM
mass              ([micro]g/[m.sup.3])  Mass
concentrations                          concentrations
                                        of elements

[PM.sub.10-2.5]   12.6 (7.5-15.8)       Ti (6.26), V (0.43), Cr
                                        (0.49), Mn (1.43), Fe
                                        (88.11), Ni (0.45), Cu
                                        (4.91), Zr (0.59), Mo
                                        (0.34), K (51.82), Rb
                                        (0.17), Ca (205.52), Sr
                                        (4.15), Ba (1.85), Al (80.76),
                                        Zn (7.52), Ga (0.0), Sn
                                        (0.6), Pb (0.88), Si
                                        (153.93), S (79.05),
                                        As (0.0), Se (0.02), Sb
                                        (0.65), Cl (124.59), Br
                                        (1.30)

[PM.sub.2.5]      9.7 (7.0-11.6)        Ti (3.81), V (4.81), Cr
                                        (4.18), Mn (2.08), Fe
                                        (129.02), Ni (1.78), Cu
                                        (7.43), Zr (0.61), Mo
                                        (0.59), K 59.12), Rb
                                        (0.18), Ca (124.59), Sr
                                        (2.60), Ba (4.50),
                                        Al (16.49), Zn (12.16), Ga
                                        (0.03), Sn (1.35), Pb
                                        (4.01), Si (65.94), S
                                        (466.39), As (0.09), Se
                                        (0.25), Sb (0.98), Cl
                                        (20.94), Br (1.51)

Abbreviations: Al, aluminum; As, arsenic; Ba, barium; Ca, calcium;
Cl, chlorine; Cr, chromium; Cu, copper; Fe, iron;
Ga, gallium; K, potassium; Mo, molybdenum; Mn, manganese;
Ni, nickel; Pb, lead; Rb, rubidium; S, sulfur; Sb, antimony;
Se, selenium; Si, silicon; Sn, tin; Sr, strontium; Ti, titanium;
V, vanadium; Zn, zinc; Zr, zirconium


Biomarkers. A summary of the levels of DNA damage, OGG1 activity, and mRNA levels according to exposure, exercise, and length of exposure is presented in Table 3. The levels of SBs and FPG sites were significantly increased during NFA exposure compared with PFA exposure independent of the length of the exposure. Exercise had no significant effect, although the exposure-related difference between the median levels of SBs and FPG sites appeared higher during periods of exercise than during periods of rest (Table 3). There were no effects of exposure on the OGG1 activity or mRNA levels of OGG1, NUDT1, or HO-1. The effect estimates in the regression model of the relationships between SB and FPG sites and the exposure variables are presented in Table 4 and this association is shown graphically in Figure 2. The levels of SBs and FPG sites were significantly associated with the NC of all size modes when assessed individually. However, in the regression model, including all size modes, SBs were only significantly associated with [NC.sub.57], whereas FPG sites were significantly associated with [NC.sub.23] and [NC.sub.57]. Adjustment for gases, including [O.sub.3], [NO.sub.x], and CO (Table 4), fruit and vegetable intake, or use of multivitamin supplements or contraceptive pills (data not shown) had no significant effects on the predictive value pre·dic·tive value
n.
The likelihood that a positive test result indicates disease or that a negative test result excludes disease.



predictive value

a measure used by clinicians to interpret diagnostic test results.
 of main exposure variables, which were not significantly associated with any of the biomarkers. There were no significant associations between exposure and either the OGG1 activity (p = 0.26) or mRNA expression levels of repair enzymes (p > 0.13) including HO-1, OGG1, and NUDT1.
Table 3. Median (interquartile range) of DNA damage, repair activity
(OGG1), and mRNA levels according to exposure, physical activity,
and length of exposure.
                                         All

Biomarker                      NFA (a)           PFA

SBs/[10.sup.6] bp (a)          0.24 (0.14-0.35)  0.16 (0.09-0.25)
FPG/[10.sup.6] bp (b)          0.53 (0.37-0.65)  0.38 (0.31-0.53)
OGG1 activity (a.u.) (c)       50.1 (36.8-64.1)  47.0 (39.9-60.3)
OGG1 mRNA (X[10.sup.-6]) (d)   6.0 (1.9-20.1)    5.7 (1.8-25.0)
NUDT1 mRNA (X[10.sup.-5]) (e)  2.14 (1.2-6.6)    2.9 (1.0-7.0)
HO-1 mRNA (X[10.sup.-7]) (f)   7.35 (4-24)       10.9 (4.5-33)

                                        Rest

Biomarker                      NFA               PFA

SBs/[10.sup.6] bp (a)          0.23 (0.13-0.35)  0.17 (0.09-0.24)
FPG/[10.sup.6] bp (b)          0.52 (0.37-0.7)   0.40 (0.32-0.53)
OGG1 activity (a.u.) (c)       50.8 (39.3-64.6)  48.1 (38.9-60.4)
OGG1 mRNA (X[10.sup.-6]) (d)   7.1 (2.1-41)      4.3 (1.8-18)
NUDT1 mRNA (X[10.sup.-5]) (e)  2.8 (1.3-8.8)     2.9 (0.95-7.3)
HO-1 mRNA (X[10.sup.-7]) (f)   6.3 (4.7-28)      9.5 (4.7-33)

                                     Bicycling

Biomarker                 NFA               PFA
SBs/[10.sup.6] bp (a)     0.25 (0.15-0.35)  0.14 (0.08-0.25)
FPG/[10.sup.6] bp (b)     0.53 (0.40-0.65)  0.37 (0.27-0.53)
OGG1 activity (a.u.) (c)  47.8 (38.3-61.9)  46.4 (41.5-59.5)
OGG1 mRNA (X10-6) (d)     5.5 (1.9-14)      8.1 (2.6-37)
NUDT1 mRNA (X10-5) (e)    2.1 (1.1-4.4)     2.9 (1.3-7.0)
HO-1 mRNA (X10-7) (f)     7.5 (4.5-18)      11 (4-44)

                                 6-hr exposure

Biomarker                 NFA               PFA

SBs/[10.sup.6] bp (a)     0.24 (0.15-0.36)  0.17 (0.09-0.24)
FPG/[10.sup.6] bp (b)     0.52 (0.37-0.70)  0.37 (0.30-0.51)
OGG1 activity (a.u.) (c)  50.8 (39.3-64.6)  46.4 (38.6-58.8)
OGG1 mRNA (X10-6) (d)     4.1 (1.8-19)      4.3 (1.7-19)
NUDT1 mRNA (X10-5) (e)    2.0 (1.0-6.6)     3.0 (1.3-9.4)
HO-1 mRNA (X10-7) (f)     7.5 (4.5-24)      9.4 (4.5-31)

                                24-hr exposure

Biomarker                 NFA               PFA

SBs/[10.sup.6] bp (a)     0.24 (0.13-0.33)  0.15 (0.08-0.23)
FPG/[10.sup.6] bp (b)     0.53 (0.37-0.63)  0.39 (0.31-0.55)
OGG1 activity (a.u.) (c)  49.8 (37.0-65.4)  47.9 (42.4-60.6)
OGG1 mRNA (X10-6) (d)     7.0 (2.4-35)      7.9 (2.4-25)
NUDT1 mRNA (X10-5) (e)    2.5 (1.3-7.4)     2.7 (1.0-6.4)
HO-1 mRNA (X10-7) (f)     6.5 (3.6-18)      12 (4.2-36)

(a) DNA strand breaks. (b) Oxidized purines as for mamidopyrimidine
DNA glycosylase sites. (c) Repair incision (arbitrary units).
(d) mRNA expression of OGG1. (e) mRNA expression of NUDT1.
(f) mRNA expression of HO-1.
Table 4. Effect estimates of the relationship between SB and FPG and
exposure variables expressed as categorical and size mode allocated
continuous 24-hr average [NC.sub.12],[NC.sub.23],[NC.sub.57], and
[NC.sub.212]. (a)

                    Single-size             Single-size
                   mode exposure                mode
                       model                  exposure
                                            model with
                                            adjustment
                                             for gases

Outcome variable,      Estimates        %      Estimates       %
exposure               (95% CI)     increase    (95% CI)     increase
variable

DNA SBs/[10.sup.6] bp

Categorical                0.459        --        0.580        --
                     (0.34-0.58)            (0.41-0.75)
                             (b)                    (b)

[NC.sub.12]                0.080       5.7        0.082       5.8
                    (0.05-0.11)b            (0.04-0.12)
                                                    (b)

[NC.sub.23]                0.091       6.5        0.079       5.6
                     (0.06-0.12)            (0.03-0.12)
                             (b)                    (b)

[NC.sub.57]                0.119       8.6        0.134       9.7
                     (0.09-0.15)            (0.09-0.18)
                             (b)                    (b)

[NC.sub.212]               0.102       7.3        0.109       7.8
                     (0.07-0.14)            (0.06-0.16)
                             (b)                    (b)

FPG sites/[10.sup.6] sites/[10.sup.6]

Categorical                0.267        --        0.221        --
                     (0.17-0.36)            (0.09-0.35)
                             (b)                    (b)

[NC.sub.12]                0.045       3.1        0.040       2.8
                     (0.03-0.06)            (0.01-0.07)
                             (b)                    (b)

[NC.sub.23]                0.066       4.7        0.054       3.8
                     (0.04-0.09)            (0.02-0.09)
                             (b)                    (b)

[NC.sub.57]                0.070       5.0        0.055       3.8
                     (0.04-0.09)            (0.02-0.09)
                             (b)                    (b)

[NC.sub.212]               0.065       4.6        0.047       3.3
                     (0.04-0.09)            (0.01-0.08)
                             (b)                    (b)

                          Multiple-size
                         mode exposure
                         model with mutual
                        adjustment and
                        adjustment for gases

Outcome variable,  Estimates (95%      %
exposure                 CI)         increase
variable

DNA SBs/[10.sup.6] bp

Categorical                    --        --

[NC.sub.12]                 0.055       3.8
                     (-0.02-0.14)

[NC.sub.23]                -0.101      -6.7
                     (-0.21-0.00)

[NC.sub.57]                 0.126       9.1
                      (0.04-0.22)
                              (b)

[NC.sub.212]                0.029       2.0
                     (-0.06-0.11)

FPG sites/[10.sup.6] bp

Categorical                    --        --

[NC.sub.12]                -0.033      -2.3
                     (-0.07-0.01)


[NC.sub.23]                 0.066       4.7
                      (0.01-0.13)
                              (b)

[NC.sub.57]                 0.040       2.8
                      (0.00-0.09)
                              (b)

[NC.sub.212]        excluded (p =        --
                            0.98)

CI, 95% confidence interval. (a) We used mixed model regression
regarding subject nested in gender as random factor. All model
estimates in Table 4 are adjusted for age, exercise, and time of
sampling. These three parameters were not significant predictors of SBs
or FPG sites in any of the models. The natural logarithms of outcome
variables were included and the predictive value (% increase) of
estimates is expressed per doubling in exposure variable. Adjustment
for gases included [O.sub.3], [NO.sub.x], and CO as the natural
logarithm of the average gas concentration, which were not significant
predictors per se in any case. (b) Statistically significant
(p < 0.05).


Discussion

We found that controlled exposure to UFPs, especially the fraction with a median diameter of 57 nm, was associated with oxidative stress in terms of SBs and FPG sites in PBMCs, with possible minor effects of exercise during exposure. We found no sign of up-regulation of the oxidative stress response or DNA repair systems.

DNA damage is considered to be an important initial event in carcinogenesis. Moreover, oxidized DNA in PBMCs is an indicator of systemic oxidative stress relevant for cardiovascular and other outcomes (Li et al. 2003; Schins et al. 2004). The FPG enzyme used in this study recognizes mainly oxidized purines, primarily guanine, such as the premutagenic 8-oxoguanine lesion and the ring-opened formamidopyrimidine bases (Collins 2004). In a previous panel study of individuals living in Copenhagen, we found associations between oxidative stress in terms of 8-oxoguanine and oxidation products of proteins and lipids, respectively, and personal accumulated 48-hr exposure to [PM.sub.2.5] expressed as mass and soot (Sorensen et al. 2003a, 2003b). In that study, however, traffic-related sources could not be identified and indoor sources, including candle burning and passive smoking, contributed to the total exposure and might also have contributed to the effects on the biomarkers (Sorensen et al. 2005a). In another study we found dose-dependent relationships between individual UFP exposure and FPG sites in PMBCs from participants the morning after exposure to traffic during biking in streets, indicating that ambient levels of air pollutants in Copenhagen are sufficient to induce oxidative stress, although indoor sources contributed significantly to both cumulated individual exposure to UFPs and the damage levels (Vinzents et al. 2005). The levels of exposure in these studies are comparable, but the participants in the present study were continuously exposed to controlled levels of trafficgenerated particles throughout 24 hr. The effects of UFP exposure in the urban air of Copenhagen are smaller than those recorded in participants exposed to heavy air pollution; for example, we found markedly higher levels of SBs and FPG sites in [PBMC.sub.s] of people living in Cotonou, Benin, which is heavily air polluted with UFPs and benzene because of the high intensity of traffic, including old vehicles and motor bicycles running on inferior gasoline (Avogbe et al. 2005). The SBs measured by the alkaline Comet assay represent frank breaks, alkaline labile labile /la·bile/ (la´bil)
1. gliding; moving from point to point over the surface; unstable; fluctuating.

2. chemically unstable.


la·bile
adj.
1.
 sites, or transient repair breaks; they are normally rapidly repaired but can be regarded as a reliable biomarker of ongoing exposure in biomonitoring studies of genotoxic genotoxic /ge·no·tox·ic/ (je´no-tok?sik) damaging to DNA: pertaining to agents known to damage DNA, thereby causing mutations, which can result in cancer.

ge·no·tox·ic
adj.
 effects in environmental and occupational settings (Collins 2004; Moller et al. 2000). Exposure to particles has been associated with elevated levels of SBs in cell culture systems and animal experimental models (Risom et al. 2005). In our previous study, we found no effect of biking in busy streets on the level of SBs the following morning, whereas FPG sites were elevated, which may be because of rapid repair of the former (Vinzents et al. 2005). The increased level of SBs in PBMCs of exposed participants in this study is consistent with an effect due to the continuous exposure until the time that blood was sampled. Similarly, high levels of SBs were associated with ongoing exposure to UFPs, benzene, and/or possibly other air pollutants among inhabitants
:This article is about the video game. For Inhabitants of housing, see Residency
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 in Benin (Avogbe et al. 2005). We observed no effect of exposure on the expression of the enzymes involved in repair of 8-oxoguanine in DNA and the nucleotide pool or in HO-1. In animals, exposure to diesel exhaust particles through inhalation of 20 mg/[m.sup.3] for 4 days or in the diet for 3 weeks have caused up-regulation of HO-1 and OGG1 in lungs, liver, and colon (Dybdahl et al. 2003; Risom et al. 2003). Apparently, the 24-hr exposure to UFP levels found in urban air is not of sufficient length and/or strength to cause a similar up-regulation of the defense systems in PBMCs despite the presence of significant damage. Thus, the levels of DNA damage are not obscured by changes in repair capacity in the present study.

Exposure chambers have been used previously to study mechanisms of effects of diesel exhaust, wood smoke, and concentrated ambient air particles, but the exposures have been much higher (200-250 [micro]g/[m.sub.3]) than in our study (Behndig et al. 2006; Holgate et al. 2003; Lippmann et al. 2005; Mills et al. 2005; Sallsten et al. 2006). None of these studies have measured DNA damage or repair, and size modes of the UFP fraction have not been investigated. Within our exposure chambers we were able to study actual UFP levels encountered in streets with moderate traffic or in dwellings with ventilation to busy streets. The [NC.sub.23]-and [NC.sub.57]-size modes were associated with oxidative stress effects in terms of DNA damage. The [NC.sub.57]-size mode mainly represents carbonaceous car·bo·na·ceous  
adj.
Consisting of, containing, relating to, or yielding carbon.


carbonaceous
Adjective

of, resembling, or containing carbon

Adj. 1.
 soot from diesel engine exhaust and the largest fraction of surface area, whereas the [NC.sub.23]-size mode represents condensed semivolatile organic compounds from diesel vehicles. These size modes have high deposition fractions, which for hydrophobic hydrophobic /hy·dro·pho·bic/ (-fo´bik)
1. pertaining to hydrophobia (rabies).

2. not readily absorbing water, or being adversely affected by water.

3.
 UFPs with diameters of 12-64 nm were found to be above 50% in our participants (Londahl et al. 2007). Although the extent of translocation translocation /trans·lo·ca·tion/ (trans?lo-ka´shun) the attachment of a fragment of one chromosome to a nonhomologous chromosome. Abbreviated t.  of UFPs has been debated, the small aerodynamic diameter (e.g., 20-60 nm) is likely to be required (Kreyling et al. 2006; Wiebert et al. 2006). Particles in this size range readily induce cellular oxidative stress and DNA damage because of their large surface area and reactivity (Borm et al. 2004; Knaapen et al. 2004; Risom et al. 2005). Accordingly, systemic oxidative stress and DNA damage is biologically plausible in relation to these UFPs. Moreover, the consistent association between exposure to UFPs as number or [PM.sub.2.5] mass and guanine oxidation in DNA of PMBCs, seen in the present and previous studies (Sorensen et al. 2003a; Avobge et al. 2005; Vinzents et al. 2005), suggests that this is a highly sensitive biomarker of systemic exposure, even if translocation is marginal. Unchanged repair of oxidized guanine during exposure and very limited effects of diet and multivitamin supplement use or other exposures indicate some specificity for UFPs in studies within individuals, whereas interindividual variation is substantial and specificity does not necessarily extend to crosssectional studies (Loft and Moller 2006; Moller and Loft 2006).

We were not able to study the chemical composition of the UFP size modes. The [PM.sub.2.5] fraction in the chamber showed high levels of sulfur and transition metals such as iron, chromium, copper, and vanadium, which have been associated with high levels of 8-oxoguanine in PBMCs (Sorensen et al. 2005b). However, sulfur and vanadium may be related to long-range contributions from the 212-nm-size mode, whereas the major part of copper in busy streets is in the form of larger (3 [micro]m) brake-wear particles, with only a minor part from tail pipe emissions (Wahlin et al. 2006).

Exercise may increase the internal dose of air pollutants because of enhanced ventilation (Daigle et al. 2003). A modest effect of exercise was expected because the deposition fraction of UFPs is not increased during exercise, and the actual increase in ventilation was limited to the two 90-min periods of cycling. The nominal difference between the median values of SBs and FPG sites during exposure to NFA and PFA was higher during exercise than during rest (Table 3), although there was no significant effect of exercise in the mixed-effects model. Accordingly, our data are compatible with an increased systemic dose and oxidative stress due to UFPs during exercise.

The irritant ir·ri·tant
adj.
Causing irritation, especially physical irritation.

n.
A source of irritation.


irritant,
n 1. an agent that causes an irritation or stimulation.
2.
 and oxidant oxidant /ox·i·dant/ (ok´si-dant) the electron acceptor in an oxidation-reduction (redox) reaction.

ox·i·dant
n.
See oxidizer.
 gases [O.sub.3] and [NO.sub.2] are usually present in ambient air and may be potential confounders when studying effects of particles (Pereira et al. 2005). The chamber [NO.sub.2] levels were constant, and the relatively low [O.sub.3] levels decreased further during filtration of the inlet air, probably due to reaction with the filter material. None of the gases had any significant associations with the biomarkers and adjustment for their levels had only minor influence on the associations between UFP exposure and the biomarkers of DNA damage.

Conclusion

Controlled exposure to [UFP.sub.s], especially related to the [NC.sub.57] mode, was significantly associated with oxidation of guanines and SBs in DNA of [PBMC.sub.s], indicating systemic oxidative stress, although there was no sign of up-regulation of relevant defence genes. Exercise may have enhanced the effect of exposure, although this failed to reach statistical significance. The data support that [UFP.sub.s], mainly from diesel vehicles, cause systemic oxidative stress at exposure levels encountered in streets or in dwellings near busy roads.

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Address correspondence to S. Loft, Department of Environmental and Occupational Health, University of Copenhagen, ster Farimagsgade 5, DK-1014 Copenhagen K, Denmark. Telephone: 45 3532 7649. Fax: 45 3525 7686. E-mail: s.loft@pubfhealth.ku.dk

* Current address: Department of Chemistry, University of Aarhus History
It was founded in 1928 as Universitetsundervisningen i Jylland ("University Teaching in Jutland") in classrooms rented from the Technical College and a teaching corps consisting of one professor of philosophy and four Readers of Danish, English, German and
, Aarhus, Denmark.

The FPG enzyme was kindly provided by A. Collins, University of Oslo The University of Oslo (Norwegian: Universitetet i Oslo, Latin: Universitas Osloensis) was founded in 1811 as Universitas Regia Fredericiana (the Royal Frederick University , Oslo, Norway.

This work was supported by the Danish National Research Councils and ECNIS (Environmental Cancer Risk, Nutrition and Individual Susceptibility), a network of excellence operating within the European Union European Union (EU), name given since the ratification (Nov., 1993) of the Treaty of European Union, or Maastricht Treaty, to the

European Community
 6th Framework Program, Priority 5: "Food Quality and Safety" (contract no 513943).

The authors declare they have no competing financial interests.

Received 13 December 2006; accepted 27 April 2007.

Elvira Vaclavik Brauner, (1) Lykke Forchhammer, (1) Peter Moller, (1) Jacob Simonsen, (1) Marianne Glasius, (2) * Peter Wahlin, (2) Ole Raaschou-Nielsen, (3) and Steffen Loft (1)

(1)Institute of Public Health, Department of Environmental and Occupational Health, University of Copenhagen, Copenhagen, Denmark; (2)Department of Atmospheric Environment, National Environmental Research Institute, Roskilde, Denmark; (3)Institute of Cancer Epidemiology, Danish Cancer Society, Copenhagen, Denmark
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Author:Brauner, Elvira Vaclavik; Forchhammer, Lykke; Moller, Peter; Simonsen, Jacob; Glasius, Marianne; Wah
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Date:Aug 1, 2007
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