Printer Friendly
The Free Library
6,672,335 articles and books
Member login
User name  
Password 
 
Join us Forgot password?

Estimating the extent of the health hazard posed by high-production volume chemicals. (Articles).


We used structure--activity relationship modeling to estimate the number of toxic chemicals among the high-production volume (HPV HPV human papillomavirus.

HPV
abbr.
human papilloma virus


Human papilloma virus (HPV) 
) group. We selected 200 chemicals from among the HPV chemical list and predicted the potential of each for its ability to induce a variety of adverse effects including genotoxicity Genotoxic substances are a type of carcinogen, specifically those capable of causing genetic mutation and of contributing to the development of tumors. This includes both certain chemical compounds and certain types of radiation. , carcinogenicity carcinogenicity /car·ci·no·ge·nic·i·ty/ (kahr?si-no-je-nis´i-te) the ability or tendency to produce cancer.

carcinogenicity

the ability or tendency to produce cancer.
, developmental, and systemic toxicity. We found a significantly less than expected proportion of toxic chemicals among the HPV sample when compared to a reference set of 10,000 chemicals representative of the universe of chemicals. Key words: high-production volume (HPV) chemicals, prevalence, structure-activity relationships, toxicity. Environ Health Perspect 109:953-956 (2001). [Online 5 September 2001]

http://ehpnet1.niehs.nih.gov/docs/2001/109p953-956cunningham /abstract.html

*********

The TestSmart program is a collaborative project between the Johns Hopkins Noun 1. Johns Hopkins - United States financier and philanthropist who left money to found the university and hospital that bear his name in Baltimore (1795-1873)
Hopkins

2.
 Center for Alternatives to Animal Testing The Johns Hopkins University Center for Alternatives to Animal Testing (CAAT) [1] has worked with scientists since 1981 to find new methods to replace the use of laboratory animals in experiments, reduce the number of animals tested, and refine necessary tests to , the Environmental Defense Fund, Carnegie-Mellon University, and the University of Pittsburgh (1). The TestSmart program was conceived in response to the U.S. Environmental Protection Agency's (U.S. EPA's) Chemical Right-to-Know Initiative High Production Volume (HPV) Chemical Challenge Program with the goal of providing a humane, economical, and efficient method of collecting basic toxicologic data for HPV chemicals (2-4). For this purpose, HPV chemicals are defined as those produced or imported into the United States United States, officially United States of America, republic (2005 est. pop. 295,734,000), 3,539,227 sq mi (9,166,598 sq km), North America. The United States is the world's third largest country in population and the fourth largest country in area.  in quantities greater than 1 million pounds per year. The program asks chemical producers and importers to voluntarily provide basic toxicologic data on HPV chemicals (5). These chemicals were identified under the Toxic Substance Control Act 1990 Inventory Update Rule (6). Overall, the HPV Chemical Challenge Program list contains 2,800 chemicals (7). The Screening Information Data Set (SIDS SIDS sudden infant death syndrome.

SIDS
abbr.
sudden infant death syndrome


SIDS,
n See syndrome, sudden infant death.
) of the Organization for Economic Cooperation and Development Organization for Economic Cooperation and Development (OECD), international organization that came into being in 1961. It superseded the Organization for European Economic Cooperation, which had been founded in 1948 to coordinate the Marshall Plan for European  was selected as the toxicologic criteria needed to meet the goals of the HPV Chemical Challenge Program (8). SIDS includes tests for genotoxicity, acute and chronic toxicity chronic toxicity Toxicology A condition caused by repeated or long-term exposure to low doses of a toxic substance , reproductive toxicity reproductive toxicity Any adverse effect attributable to exposure to a chemical, directed against the reproductive and/or related endocrine systems Adverse effects Altered sexual behavior, fertility, pregnancy outcomes, or modifications in other functions that , ecotoxicity, and environmental fate.

One of the challenges, as part of the TestSmart Program, was to assess the overall magnitude of the health hazards posed by HPV chemicals based on structure--activity relationship (SAR (Segmentation And Reassembly) The protocol that converts data to cells for transmission over an ATM network. It is the lower part of the ATM Adaption Layer (AAL), which is responsible for the entire operation. See AAL.

SAR - segmentation and reassembly
) modeling. The U.S. EPA EPA eicosapentaenoic acid.

EPA
abbr.
eicosapentaenoic acid


EPA,
n.pr See acid, eicosapentaenoic.

EPA,
n.
 will consider test result submission for the HPV Program based on SAR models that are scientifically justifiable (9). As part of this program we undertook an analysis of a random set of 200 HPV chemicals and predicted the probability of each to induce a variety of toxic effects including genotoxicity, carcinogenicity, developmental toxicity, and systemic toxicity. The majority of these chemicals are not part of the learning sets used to derive the SAR models, thereby eliminating the possibility of tautological tau·tol·o·gy  
n. pl. tau·tol·o·gies
1.
a. Needless repetition of the same sense in different words; redundancy.

b. An instance of such repetition.

2.
 artifacts artifacts

see specimen artifacts.
. Although SAR projections may not have perfect predictivity, the current study seeks to assess the prevalence of toxicants among HPV chemicals. Such estimates based on SAR techniques can be derived for populations of molecules provided the SAR model has been validated and its predictivity is known (10-12).

Materials and Methods

HPV chemical selection. A sample of 200 chemicals was selected from among the HPV chemicals (7). The chemicals chosen were randomly selected and a) were pure and unique substances; b) were organic; c) were nonpolymeric; and d) did not contain metals.

Reference chemicals. A reference set of 10,000 chemicals representing the universe of chemicals was used as a control set. The composition of this set is consistent with estimates produced by the National Academy of Science (13). This set was derived through sampling chemical structure libraries and the National Institutes of Health Developmental Therapeutics Program. This reference set was used to assess whether the HPV chemicals represent a greater or lesser toxicologic risk than other chemicals. For this evaluation we compared the percentage of chemicals predicted to be toxic in the HPV sample to the percentage of chemicals predicted to be toxic in the reference chemical set.

SAR predictions. We used the CASE/ MULTICASE program (MULTICASE Inc., Beachwood, OH) (14-16) to predict the toxicity of the sampled HPV chemicals and the 10,000 chemicals in the reference set. All chemicals from both groups were predicted for their ability to induce a number of different toxic end points (Table 1). Each toxic end point was predicted separately. The predictions are based on the occurrence of identified molecular features that have been previously identified as significantly related to toxicity for each end point.

The CASE modeling process begins with the compilation of a set of chemical structures (typically in Smiles code) and an experimentally derived biological activity value. These data are placed into a learning set for the program. Each chemical in the learning set is broken down, in silico, to all possible fragments from 2 to 10 heavy (i.e., nonhydrogen) atoms. Each fragment is labeled with the name and activity of its parent chemical. Upon completion of this process, the program organizes the list of fragments and tabulates the number of chemicals containing each of them. The program then identifies those fragments that were identified predominantly in active chemicals and refers to these fragments as biophores. The selection of biophores is based on the binary experimental results of each chemical. For example, biophores for a cancer causation model are identified that are predominantly found in chemicals that tested positive for carcinogenicity compared to those that were noncarcinogenic. The particular potency value associated with each biophore is then determined from the experimental potencies for the chemicals making up the biophore. The total list of biophores is then used to derive a global quantitative SAR (QSAR QSAR Quantitative Structure-Activity Relationship
QSAR Quality System Audit Report
QSAR Quality Service Activity Report
QSAR Québec Secours Search and Rescue (Canada) 
) equation. These biophores serve as the basis for both predictive and mechanistic analysis of toxicity.

The MULTICASE module then selects from the list of biophores the most important one based on its occurrence in the largest number of chemicals in the learning set. At this point in the MULTICASE routine, a congeneric con·ge·ner  
n.
1. A member of the same kind, class, or group.

2. An organism belonging to the same taxonomic genus as another organism.
 series of chemicals has been identified, with the biophore being the unifying feature. MULTICASE then performs a series of defined chemical substitutions of the atoms in the first biophore (e.g., one halogen for another halogen or a nitrogen for a carbon in aromatic systems) and then searches for these expanded definitions of the biophore in the library of previously identified significant fragments. All chemicals containing the biophore and the expanded definitions are grouped together. Thus a biophore may consist of a single feature or a family of chemically similar features.

Using the molecules contained in this family of chemicals as a new learning set, MULTICASE identifies modulators of their activity. These modulators may be chemical, physicochemical physicochemical /phys·i·co·chem·i·cal/ (fiz?i-ko-kem´ik-il) pertaining to both physics and chemistry.

phys·i·co·chem·i·cal
adj.
1. Relating to both physical and chemical properties.
, or quantum mechanical parameters. Modulators augment or decrease the activity of the chemicals containing the biophore. Some values and coefficients are localized to particular atoms of a chemical (e.g., a charge or highest occupied molecular orbit coefficient on an individual atom derived by a modified Huckel method). The biophore and identified modulators are then used to derive local QSAR equations for chemicals within this subset. If the entire learning set is congeneric, then the single biophore and associated modulators may explain the activity of the entire set; this usually does not occur and there will be a group of molecules not explained by the single biophore and associated modulators. When this happens, the program will remove from consideration the molecules already explained and will search for the next biophore. The process is iterated until all of the active molecules in the learning set have been explained or until no significant fragments can be found to explain them.

The resulting list of biophores can then be used in mechanistic studies or to predict the activity of yet untested molecules (10). For example, upon submission for evaluation, MULTICASE will determine if an unknown molecule contains a biophore. If the molecule does not contain a biophore, it will be predicted, by default, to be inactive. When the molecule contains a biophore, the program will make a qualitative prediction that the chemical is biologically active with an associated probability that this prediction is correct. Moreover, MULTICASE will inspect the molecule for the presence of modulators associated with this biophore. The program then incorporates the parameters for the identified modulators into the QSAR equation and produces a quantitative prediction for the potency of the chemical. In essence, although biophores are the determining structures, the modulators will determine whether and to what extent the biological potential of the chemical containing the biophore is expressed.

Application of the CASE and MULTICASE programs results in four submodels (17,18). These are two models to estimate potency and two to estimate probability of activity. Because each of them may reflect different facets of the toxicologic phenomena under study, they are combined to give an overall Bayesian probability Bayesian probability is an interpretation of the probability calculus which holds that the concept of probability can be defined as the degree to which a person (or community) believes that a proposition is true.  of the toxicity for each chemical tested. A chemical is considered active if its Bayesian probability is > 0.6 and negative if it is < 0.4.

SAR models. A number of validated and characterized SAR models (11) of toxicologic phenomena were used in the course of these studies. These included the induction of mutations in Salmonella. That database was developed under the aegis of the U.S. National Toxicology Program National Toxicology Program Environment A program that conducts toxicologic tests on substances frequently found at the EPA's National Priorities List sites, which have the greatest potential for human exposure  (NTP (Network Time Protocol) A TCP/IP protocol used to synchronize the real time clock in computers, network devices and other electronic equipment that is time sensitive. It is also used to maintain the correct time in NTP-based wall and desk clocks. ) (19-23). SAR models based on subsets of that database have been described (24-26). SAR models of the ability to induce error-prone DNA repair DNA repair refers to a collection of processes by which a cell identifies and corrects damage to the DNA molecules that encode its genome. In human cells, both normal metabolic activities and environmental factors such as UV light can cause DNA damage, resulting in as many as 1  in Escherichia coli Escherichia coli (ĕsh'ərĭk`ēə kō`lī), common bacterium that normally inhabits the intestinal tracts of humans and animals, but can cause infection in other parts of the body, especially the urinary tract.  (SOS SOS, code letters of the international distress signal. The signal is expressed in International Morse code as … — — — … (three dots, three dashes, three dots).  Chromotest; EBPI, Brampton, Ontario Brampton (IPA: ˈbræmptən, ˈbræmtən) is a city in the GTA of Ontario, Canada and the seat of Peel Region. As of the 2006 census, Brampton's population stood at 433,806. , Canada) (27,28), mutations in cultured mouse lymphoma cells (29), sister chromatid exchanges (SCEs), chromosomal aberrations in cultured Chinese hamster The Chinese Hamster is a species of hamster, scientific names Cricetulus griseus, which originates in the deserts of northern China and Mongolia. These animals grow to between 7.5 and 9 cm in length and as adults can weigh 50-75 grams.  ovary ovary, ductless gland of the female in which the ova (female reproductive cells) are produced. In vertebrate animals the ovary also secretes the sex hormones estrogen and progesterone, which control the development of the sexual organs and the secondary sexual  (CHO CHO Carbohydrate (chemical formla Carbon Hydrogen Oxygen)
CHO Chinese Hamster Ovary
CHO Chemical Hygiene Officer
CHO Chief Health Officer (corporate title) 
) cells (30), and unscheduled DNA synthesis DNA synthesis commonly refers to:
  • DNA replication - DNA biosynthesis (in vivo DNA amplification)
  • Polymerase chain reaction - enzymatic DNA synthesis (in vitro DNA amplification)
  • Oligonucleotide synthesis - chemical synthesis of nucleic acids
 in primary rat hepatocytes (31) have been described previously, as have models of the potentials for inducing SCEs (32) and micronuclei in vivo in vivo /in vi·vo/ (ve´vo) [L.] within the living body.

in vi·vo
adj.
Within a living organism.



in vivo adv.
 (33).

We used two rodent carcinogenicity databases: the Carcinogenic carcinogenic

having a capacity for carcinogenesis.
 Potency Database (CPDB CPDB Carcinogenic Potency Database
CPDB Clinical Pathway Database
CPDB Command Position Database
CPDB Characteristics & Performance Database
CPDB Common Picture Database
) assembled by Gold and associates (34-38); and the rodent carcinogenicity database generated under the auspices of the NTP (39,40). SAR models of these databases have also been described (41-43). We combined the individual projections derived from these different databases using Bayes' theorem Noun 1. Bayes' theorem - (statistics) a theorem describing how the conditional probability of a set of possible causes for a given observed event can be computed from knowledge of the probability of each cause and the conditional probability of the outcome of each , described previously (17,18) to yield a single prediction of carcinogenicity.

The SAR model of cellular toxicity was based on assays using cultured BALB/c-3T3 cells (44). A chemical was considered cytotoxic cy·to·tox·ic
adj.
Of, relating to, or producing a toxic effect on cells.



cyto·tox·ic
 if its I[C.sub.50] (concentration that inhibits 50% growth) value was [less than or equal to] 1 [micro]M. The SAR model of lethality to minnows was derived from previously published data (45). The SAR model for lethality to rats (L[D.sub.50]; 50% lethal dose lethal dose
n. Abbr. LD
The dose of a chemical or biological preparation that is likely to cause death.
) was based on data on 1,411 orally administered chemicals extracted from the Registry of Toxic Effects of Chemical Substances Registry of Toxic Effects of Chemical Substances (RTECS) is a database of toxicity information compiled from the open scientific literature without reference to the validity or usefulness of the studies reported.  (46). In that SAR model, toxicity was defined as L[D.sub.50] [less than or equal to] 7.2 mmol/kg.

The SAR models for eye irritation (47), sensory irritation (48), developmental toxicity in humans (49) and in hamsters (50), allergic contact dermatitis allergic contact dermatitis Allergic dermatitis Dermatology A condition caused by cell-mediated immunity due to contact with haptens–eg, nickel, chromates, ursodiols in poison ivy and poison oak, synthetic chemicals, drugs, cosmetics, jewelry, neomycin  (51), inhibition of gap junctional intercellular intercellular /in·ter·cel·lu·lar/ (-sel´u-lar) between or among cells.

in·ter·cel·lu·lar
adj.
Located among or between cells.
 communication (GJIC GJIC gap junctional intercellular communication ) (52), and environmental biodegradation (53) were also used.

The SAR model of [[alpha].sub.2]u-globulin nephropathy nephropathy /ne·phrop·a·thy/ (ne-frop´ah-the) disease of the kidneys.nephropath´ic

analgesic nephropathy
 in male rats (54) was based on data kindly supplied by L.D. Lehman-McKeenan from the Procter and Gamble Company (Cincinnati, OH).

The predictive ability of each model was estimated by its ability to correctly predict the activity of chemicals not used to build the model but for which we knew the true experimental results. These values are listed in Table 1 as concordance concordance /con·cor·dance/ (-kord´ins) in genetics, the occurrence of a given trait in both members of a twin pair.concor´dant

con·cor·dance
n.
 (i.e., percent correct predictions over total predictions). These values were calculated based on pooling multiple 10-fold cross-validation results. Each learning set was divided 10 times into learning and validation sets. Each learning set was used to derive a model, and this model was then used to predict the activity of the chemicals left out in the validation set. Because the activity of the chemicals in the validation set was known, we could determine the number of correct predictions and estimate the concordance for each model.

Results and Discussion

The HPV chemicals can be considered to present an elevated toxicologic risk to humans and to the environment based solely on their large production volume and the consequent potential for exposure (55). However, it would be of interest to know whether the HPV chemicals, as a group, are more or less toxic than "average" chemicals. To assess this, we compared the proportion of chemicals in the HPV sample predicted to be toxic to the proportion of chemicals predicted to be toxic in the reference set representing the universe of chemicals. These comparisons were done one toxic end point at a time. Unexpectedly, for all toxic effects assessed except one (the in vitro in vitro /in vi·tro/ (in ve´tro) [L.] within a glass; observable in a test tube; in an artificial environment.

in vi·tro
adj.
In an artificial environment outside a living organism.
 induction of SCEs), the proportion of chemicals predicted to be toxic among the HPV sample was significantly less than the proportion of chemicals predicted to be toxic in the reference set (Table 1). The question obviously arises as to the reason for this decrease in the number of potentially toxic HPV chemicals when compared to what would be expected from a random sample of chemicals. This is particularly relevant given that the underlying reason for the HPV Challenge program is that little is known about the toxicities of the HPV chemicals (55). From this reasoning, it can be assumed that hazardous chemicals were not excluded from production based on the results of toxicologic prescreens.

A more detailed analysis of the mutagenic/genotoxic potentials indicate that with respect to the possibility for inducing mutations in Salmonella, the proportion of HPV chemicals predicted to be mutagens was significantly less than that for the reference set (19.5% vs. 31.5%, p = 0.0001; Table 1). Interestingly, it has recently been reported that of 46 HPV chemicals tested for Salmonella mutagenicity mutagenicity /mu·ta·ge·nic·i·ty/ (-je-nis´it-e) the property of being able to induce genetic mutation.

mutagenicity

the property of being able to induce genetic mutation.
, 20% were mutagens (56). Moreover, this same report showed an increase in the proportion of mutagens when comparing HPV chemicals to all chemicals in commerce. This is in concordance with our predictions.

Predictions based on other assays designed to assess mutagenic mutagenic

inducing genetic mutation.
 and genotoxic genotoxic /ge·no·tox·ic/ (je´no-tok?sik) damaging to DNA: pertaining to agents known to damage DNA, thereby causing mutations, which can result in cancer.

ge·no·tox·ic
adj.
 activity in prokaryotes or cultured cells (Table 1) showed the same pattern; (i.e., the proportion of HPV chemicals predicted to induce these effects was lower that for the chemicals in the reference set). The only exception to this is the proportion of chemicals predicted to induce SCEs in cultured CHO cells. However, the ability to induce SCEs in vitro is not restricted to genotoxicants and may, in fact, reflect cell toxicity (57).

The Salmonella mutagenicity assay is usually the first screen used, but the results are frequently confirmed by an in vivo test for genotoxicity. The assay frequently used to confirm that in vitro assay is the mouse micronucleus micronucleus /mi·cro·nu·cle·us/ (-noo´kle-us)
1. in ciliate protozoa, the smaller of two types of nucleus in each cell, which functions in sexual reproduction; cf. macronucleus.

2. a small nucleus.
 assay (58). The proportion of chemicals predicted as in vivo micronucleus inducers among the HPV sample is also significantly less than that for the reference set (Table 1). The same is true for the other in vivo assay, the induction of SCEs in mice (Table 1). It should be noted that although the micronucleus assay is confirmatory when the Salmonella assay indicates the potential for mutagenicity, the micronucleus assay response can also be elicited by nongenotoxicants such as inhibitors of tubulin tubulin /tu·bu·lin/ (too´bu-lin) the constituent protein of microtubules.

tu·bu·lin
n.
A globular protein that is the structural constituent of microtubules.
 polymerization polymerization

Any process in which monomers combine chemically to produce a polymer. The monomer molecules—which in the polymer usually number from at least 100 to many thousands—may or may not all be the same.
 and of microtubular integrity, as well as by aneugens (59,60). This may explain the greater projected proportion of micronuclei inducers when compared to Salmonella mutagens.

Based on predicted positive responses in both the Salmonella mutagenicity and the micronucleus assays, which define in vivo genotoxicants, we estimate that 8% of the chemicals in the HPV sample possess that potential, in contrast to 23% of chemicals in the reference set (Table 1), thus further suggesting that the HPV chemicals, as a group, represent less of a genotoxic risk than chemicals at large.

The major function of many mutagenicity and genotoxicity assays is to help identify carcinogens Carcinogens
Substances in the environment that cause cancer, presumably by inducing mutations, with prolonged exposure.

Mentioned in: Colon Cancer, Rectal Cancer
 that may pose a risk to humans (58). Based on predictions made by several SAR models derived from rodent carcinogenicity data, the HPV sample is estimated to be significantly less likely to induce cancers than the reference chemicals (16.5% vs. 33.5%, p < 0.00001; Table 1). However, these proportions are based on rodent cancer bioassays in which animals are exposed up to the maximum tolerated dose for their lifetime. It is doubtful that this is an apt model for human exposure. On the other hand, the majority of recognized human carcinogens are also mutagenic and/or genotoxic (61-63). To evaluate the prevalence of genotoxic carcinogens (39), we predicted the proportion of chemicals that would induce cancers in rodents and mutagenicity in Salmonella (i.e., genotoxic carcinogens). Again, there was a significant decrease in the proportion of chemicals predicted for these end points between the HPV sample and the reference set (4.5% vs. 16%,p < 0.00001; Table 1).

Carcinogenicity in rodents is not solely due to DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 damage. Other mechanisms including cell toxicity, mitogenesis mi·to·gen·e·sis
n.
Induction of mitosis in a cell.



mitogenesis

the induction of mitosis in a cell.
, and inhibition of GJIC have been postulated (64-71). For these end points also, the proportion of chemicals predicted positive in the HPV sample was less than that of the reference set (e.g., cell toxicity, 26.5% vs. 41.2%; [[alpha].sub.2]u-globulin-mediated nephropathy leading to renal tumors in male rats, 8.5% vs. 14.4%; and inhibition of GJIC, 14% vs. 27.3%; Table 1).

The HPV sample is predicted to have a lower proportion of chemicals that are developmental toxicants for hamsters or humans (Table 1). That sample was also predicted to have a lower proportion of inducers of allergic contact dermatitis, sensory irritation, and eye irritation (Table 1). Finally, the HPV sample was predicted to have a much lower proportion of systemic toxicants than the reference set (Table 1).

With respect to environmental effects, the HPV sample was predicted to contain significantly fewer aquatic toxicants than the reference set (Table 1). However, the estimated environmental biodegradability of the two groups was not significantly different.

Conclusion

In this study we predicted the occurrence of chemicals capable of inducing 10 separate toxicologic end points in a sample of HPV chemicals and compared these values to those from a reference set of 10,000 chemicals. Regardless of the nature of the toxicologic phenomenon, the subset of HPV chemicals was estimated to contain a significantly lower proportion of toxicants than the reference set.

Although it can be expected that the potential for human contact with the HPV chemicals is great, the potential for individual members of the group to induce health effects is less than expected. The reason for this lower proportion of toxicants in the HPV sample and presumably pre·sum·a·ble  
adj.
That can be presumed or taken for granted; reasonable as a supposition: presumable causes of the disaster.
 in the entire HPV list is unknown. However, it may reflect chemical properties of this group that allow them to be used as chemical stocks. These would include greater stability and lower reactivity, two useful properties for storage and transport of chemicals. Thus the HPV chemicals, for utility and handling ease, are not typically reactive. Presumably these chemicals, during the processing to final products, are transformed into multiple reactive intermediates in less than HPV quantities.

During the course of this study, Zeiger and Margolin (56) estimated the proportion of mutagens in a subset of HPV chemicals using preexisting pre·ex·ist or pre-ex·ist  
v. pre·ex·ist·ed, pre·ex·ist·ing, pre·ex·ists

v.tr.
To exist before (something); precede: Dinosaurs preexisted humans.

v.intr.
 data. Their results matched ours, leading us to conclude that our sample of HPV chemicals is representative of the group and that our predictions are in accord with experimental results.
Table 1. Predicted prevalences of toxicants among groups of chemicals.

                                    Prevalence (%)

                             HPV     Universe                Concor-
                             che-       of                    dance
SAR model                    mical   chemicals    p-Value      (%)

Mutagenicity: Salmonella      19.5     31.5        0.0001      85
SOS DNA repair                 3.0     12.4      < 0.0001      87
  (Chromotest)
Mutagenicity: mouse           19.0     49.2      < 0.00001     70
  lymphoma
Unscheduled DNA synthesis      6.0     21.8      < 0.00001     78
Sister chromatid exchanges    29.0     17.1      < 0.00001     71
  in vitro
Chromosomal aberrations       19.5     33.4      < 0.00001     66
  in vitro
Induction of micronuclei      46.5     59.5        0.00001     81
  in vivo
Sister chromatid exchanges    45.5     56.8        0.0007      83
  in vivo
Carcinogenicity in rodents    16.5     33.5      < 0.00001     74
In vivo genotoxicants          8.0     23.0      < 0.00001     NA
Genotoxic carcinogens          4.5     16.0      < 0.00001     NA
Cell toxicity                 26.5     41.2      < 0.00001     84
[[alpha].sub.2]u-Globulin      8.5     14.4        0.009       83
  mediated nephropathy
Inhibition GJIC               14.0     27.3      < 0.00001     70
Developmental toxicity:       18.0     26.3        0.004       74
  hamsters
Developmental toxicity:        3.0     16.4      < 0.00001     75
  humans
Allergic contact              31.0     48.4      < 0.00001     86
  dermatitis
Sensory irritation            19.5     43.4      < 0.00001     79
Eye irritation                33.0     47.4        0.00003     80
Lethality to rats             15.0     84.7      < 0.00001     84
Toxicity to minnows           38.0     56.4      < 0.00001     76
Biodegradability              47.0     48.1        0.4         70

Abbreviations: GJIC, gap junctional intercellular communication; NA,
not applicable because these are joint probabilities based on two SAR
models(11).


REFERENCES AND NOTES

(1.) Green S, Goldberg AM, Zurlo J. The TestSmart--HPV program - Development of an integrated approach for testing high production volume chemicals. Regul Toxicol Pharmacol 33:105-109 (2001).

(2.) U.S. Environmental Protection Agency Environmental Protection Agency (EPA), independent agency of the U.S. government, with headquarters in Washington, D.C. It was established in 1970 to reduce and control air and water pollution, noise pollution, and radiation and to ensure the safe handling and . ChemRTK HPV Challenge Program Guidance Documents. Available: http://www.epa.gov/opptintr/chemrtk/guidocs.htm [cited 8 August 2001].

(3.) Libowitz LA. Letter from CAAT CAAT Campaign Against Arms Trade (UK)
CAAT Center for Alternatives to Animal Testing (Johns Hopkins School of Hygiene and Public Health)
CAAT College of Applied Arts and Technology
. Altern Lab Anim 27:225-226 (1999).

(4.) Stokstad E. Toxicity testing: the many arts of persuasion [Editorial], Science 286:1070 (1999).

(5.) U.S. Environmental Protection Agency. ChemRTK HPV Challenge Program. Available: http://www.epa.gov/opptintr/ chemrtk/volchall.htm [cited 8 August 2001].

(6.) U.S. Environmental Protection Agency. Chemical Testing and Information Home Page, Available: http:// www.epa.gov/opptintr/chemtest/index.htm [cited 8 August 2001].

(7.) U.S. Environmental Protection Agency. ChemRTK HPV Challenge Program Chemical List. Available: http:// www.epa.gov/opptintr/chemrtk/hpvchmlt.htm [cited 8 August 2001].

(8.) U.S. Environmental Protection Agency, Section 3.4 Guidance for Meeting the SIDS Requirements (The SIDS Guide). Available: http://www.epa.gov/opptintr/chemrtk/ sidsappb.htm [cited 8 August 2001].

(9.) U.S. Environmental Ptoection Agency. The Use of Structure-Activity Relationships (SAR) in the High Production Volume Chemicals Challenge Program. Available: http://www.epa.gov/opptintr/chemrtk/ sarfinl1.htm [cited 8 August 2001].

(10.) Rosenkranz HS, Cunningham AR, Zhang YP, Claycamp HG, Macina OT, Sussman NB, Grant SC, Klopman G. Development, characterization and application of predictive-toxicology models. SAR QSAR Environ Res 10:277-298 (1999).

(11.) Rosenkranz HR, Cunningham AR, Zhang YP, Klopman G. Applications of the CASE/MULTICASE SAR method to environmental and public health situations. SAR QSAR Environ Res 10:263-276 (1999).

(12.) Pollack N, Cunningham AR, Klopman G, Rosenkranz HS. Chemical diversity approach for evaluating mechanistic relatedness among toxicological phenomena. SAR QSAR Environ Res 10:533-543 (1999).

(13.) National Academy of Science. Toxicity Testing. Strategies to Determine Needs and Priorities. Washington, DC:National Academy Press, 1984.

(14.) Klopman G, Rosenkranz HS. Structural requirements for the mutagenicity of environmental nitroarenes. Mutat Res 126:227-238 (1984).

(15.) Klopman G. MULTICASE 1. A hierarchical computer automated structure evaluation program. Quant Quant

A person with numerical and computer skills who carries out quantitative analyses of companies.


quant

A person who has strong skills in mathematics, engineering, or computer science, and who applies those skills to the securities
 Struct-Act Relat 11:176-184 (1992).

(16.) Klopman G, Rosenkranz HS. Approaches to SAR in carcinogenesis car·ci·no·gen·e·sis
n.
The production of cancer.



carcinogenesis

production of cancer.


biological carcinogenesis
viruses and some parasites are capable of initiating neoplasia.
 and mutagenesis mutagenesis /mu·ta·gen·e·sis/ (mu?tah-jen´e-sis)
1. the production of change.

2. the induction of genetic mutation.


mu·ta·gen·e·sis
n. pl.
. Prediction of carcinogenicity/mutagenicity using MULTI-CASE. Mutat Res 305:33-46 (1994).

(17.) Macina OT, Zhang YP, Rosenkranz HS. Improved predictivity of carcinogens: the use of a battery of SAR models. In: Testing, Predicting and Integrating Carcinogenicity (Kitchin K, ed). New York New York, state, United States
New York, Middle Atlantic state of the United States. It is bordered by Vermont, Massachusetts, Connecticut, and the Atlantic Ocean (E), New Jersey and Pennsylvania (S), Lakes Erie and Ontario and the Canadian province of
:Marcel Dekker, 1998;227-250.

(18.) Zhang YP, Sussman N, Macina OT, Rosenkranz HS, Klopman G. Prediction of the carcinogenicity of a second group of chemicals undergoing carcinogenicity testing. Environ Health Perspect 104(suppl 5):1045-1050 (1996).

(19.) Dunkel VC, Zeiger E, Brusick D, McCoy E, McGregor D, Mortelmans K, Rosenkranz HS, Simmon VF. Reproducibility of microbial microbial

pertaining to or emanating from a microbe.


microbial digestion
the breakdown of organic material, especially feedstuffs, by microbial organisms.
 mutagenicity assays: I. Tests with Salmonella typhimurium Salmonella ty·phi·mu·ri·um
n.
A bacterium that causes food poisoning.
 and Escherichia coli using standardized protocol. Environ Mutagen mutagen: see mutation.
mutagen

Any agent capable of altering a cell's genetic makeup by changing the structure of the hereditary material, DNA. Many forms of electromagnetic radiation (e.g.
 6(suppl 2):1-251 (1984).

(20.) Dunkel VC, Zeiger E, Brusick D, McCoy E, McGregor D, Mortelmans K, Rosenkranz HS, Simmon VF. Reproducibility of microbial mutagenicity assays: II. Testing of carcinogens and noncarcinogens in Salmonella typhimurium and Escherichia coli. Environ Mutagen 7(suppl 5):1-248 (1985).

(21.) Zeiger E. Carcinogenicity of mutagens: predictive capability of the Salmonella mutagenesis assay for rodent carcinogenicity. Cancer Res 47:1287-1296 (1987).

(22.) Zeiger E, Anderson B, Haworth S, Lawlor T, Mortelmans K. Salmonella mutagenicity tests. IV. Results from the testing of 300 chemicals. Environ Mol Mutagen 11(suppl 2):1-158 (1988).

(23.) Zeiger E, Anderson B, Haworth S, Lawlor T, Mortelmans K, Speck W. Salmonella mutagenicity tests. III. Results form the testing of 225 chemicals, Environ Mutagen 9(suppl 9):1-109 (1987).

(24.) Rosenkranz HS, Klopman G. The structural basis of the mutagenicity of chemicals in Salmonella typhimurium: The National Toxicology Program Data Base. Mutat Res 228:51-80 (1990).

(25.) Zeiger E, Ashby J, Bakale G, Enslein K, Klopman G, Rosenkranz HS. Prediction of Salmonella mutagenicity. Mutagenesis 11:471-484 (1996).

(26.) Lui M, Sussman N, Klopman G, Rosenkranz HS. Estimation of the optimal database size for structure-activity analyses: the Salmonella mutagenicity database. Mutat Res 358:63-72 (1996).

(27.) Mersch-Sundermann V, Schneider U, Klopman G, Rosenkranz HS. SOS-Induction in E. coli E. coli: see Escherichia coli.
E. coli
 in full Escherichia coli

Species of bacterium that inhabits the stomach and intestines. E. coli can be transmitted by water, milk, food, or flies and other insects.
 and Salmonella mutagenicity: 8 comparison using 330 compounds, Mutagenesis 9:205-224 (1994).

(28.) Mersch-Sundermann V, Klopman G, Rosenkranz HS. Chemical structure and genotoxicity: studies of the SOS chromotest. Mutat Res 340:81-91 (1996).

(29.) Grant SC, Zhang YP, Klopman G, Rosenkranz HS. Modeling the mouse lymphoma forward mutational assay: the Gene-Tox program database. Mutat Res 465:201-229 (2000).

(30.) Rosenkranz HS, Ennever FK, Dimayuga M, Klopman G, Significant differences in the structural basis of the induction of sister chromatid exchanges and chromosomal aberrations in Chinese hamster ovary cells. Environ Mol Mutagen 16:149-177 (1990).

(31.) Zhang YP, Van Praagh A, Klopman G, Rosenkranz HS. Structural basis of the induction of unscheduled DNA synthesis in rat hepatocytes. Mutagenesie 9:141-149 (1994).

(32.) Labbauf A, Klopman G, Rosenkranz HS. Dichotomous di·chot·o·mous  
adj.
1. Divided or dividing into two parts or classifications.

2. Characterized by dichotomy.



di·chot
 relationship between DNA reactivity and the induction of sister chromatid chromatid (krō`mətəd): see chromosome; crossing over.  in vivo and in vitro. Mutat Res 377:37-52 (1998).

(33.) Yang W-L, Klopman G, Rosenkranz HS. Structural basis of the in vivo induction of micronuclei. Mutat Res 272:111-124 (1992).

(34.) Gold LS, Sawyer CB, Magaw R, Backman GM, de Veciana M, Levinson R, Hooper NK, Havender WR, Bernstein L, Peto R, et al. A carcinogenic potency database of the standardized results of animal bioassays. Environ Health Perspect 58:9-319 (1984).

(35.) Gold LS, de Veciana M, Backman GM, Magaw R, Lopipero M, Smith M, Blumenthal M, Levinson R, Bernstein L, Ames BN. Chronological supplement to the carcinogenic potency database: standardized results of animal bioassays published through December 1982. Environ Health Perspect 67:161-200 (1986).

(36.) Gold LS, Slone TH, Backman GM, Magaw R, Da Costa M, Lopipero P, Blumenthal M, Ames BN. Second chronological supplement to the Carcinogenic Potency Database: standardized results of animal bioassays published through December 1984 and by the National Toxicology Program through May 1986. Environ Health Perspect 74:237-329 (1987).

(37.) Gold LS, Slone TH, Backman GM, Eisenberg S, Da Costa M, Wong M, Manley NB, Rohrbach L, Ames BN. Third chronological supplement to the Carcinogenic Potency Database: standardized results of animal bioassays published through December 1986 and by the National Toxicology Program through June 1987. Environ Health Perspect 84:215-286 (1990).

(38.) Gold LS, Manley NB, Slone TH, Garfinkel GB, Rohrbach L, Ames BN. The fifth plot of the Carcinogenic Potency Database: results of animal bioassays published in the general literature through 1988 and by the National Toxicology Program through 1989. Environ Health Perspect 100:65-168 (1993).

(39.) Ashby J, Tennant RW. Definitive relationships among chemical structure, carcinogenicity and mutagenicity for 301 chemicals tested by the U.S. NTP. Mutat Res 257:229-306 (1991).

(40.) Ashby J, Tennant RW. Prediction of rodent carcinogenicity for 44 chemicals: results. Mutagenesis 9:7-15 (1994).

(41.) Rosenkranz HS, Klopman G. Structural basis of carcinogenicity in rodents of genotoxicants and non-genotoxicants. Mutat Res 228:105-124 (1990).

(42.) Cunningham AR, Rosenkranz HS, Zhang YP, Klopman G. Identification of genotoxic and non-genotoxic alerts for cancer in mice: the carcinogenic potency database. Mutat Res 398:1-17 (1998).

(43.) Cunningham AR, Rosenkranz HS, Klopman G. Identification of structural features and associated mechanisms of action for carcinogens in rats. Mutat Res 405:9-28 (1998).

(44.) Matthews EJ, Spalding JW, Tennant RW. Transformation of BALB/c-3T3 cells. V. transformation responses of 166 chemicals compared with mutagenicity in Salmonella and carcinogenicity in rodent bioassay Bioassay

A method for the quantitation of the effects on a biological system by its exposure to a substance, as well as the quantitation of the concentration of a substance by some observable effect on a biological system.
. Environ Health Perspect 101(suppl 2):347-482 (1993).

(45.) Nendza M, Russom CL. QSAR modeling of the ERL-D ERL-D Environmental Research Laboratory - Duluth (EPA)  fat-head minnow minnow, common name for the Cyprinidae, a large family of freshwater fish which includes the carp (Cyprinus carpio), and of which there are some 300 American species. The European minnow is Phoxinus phoxinus.  acute toxicity acute toxicity Pharmacology Illness caused by a single exposure to a toxic substance  database. Xenobiotica 21:147-170 (1991).

(46.) National Institute for Occupational Safety and Health National Institute for Occupational Safety and Health,
n.pr an institute of the Centers for Disease Control and Prevention that is responsible for assuring safe and healthful working conditions and for developing standards of safety and health.
. Registry of Toxic Effects of Chemical Substances (RTECS RTECS Registry of Toxic Effects of Chemical Substances
RTECS Residential Transportation Energy Consumption Survey
). Available: http://www.cdc.gov/niosh/rtecs.html [cited 8 August 2001].

(47.) Rosenkranz HS, Zhang YP, Klopman G. The development and characterization of an SAR model of the Draize eye irritation test. Altern Lab Anim 20:779-809 (1999).

(48.) Macina OT, Klopman G, Rosenkranz HS. Structural basis of sensory irritation. Inhal Toxicol 9:465-476 (1997).

(49.) Ghanooni M, Mattison DR, Zhang YP, Macina OT, Rosenkranz HS, Klopman G, Structural determinants associated with risk of human developmental toxicity. Am J Obstet Gynecol 176:799-806 (1997).

(50.) Gomez J, Macina OT, Mattison DR, Zhang YP, Klopman G, Rosenkranz HS. Structural determinants of developmental toxicity in hamsters. Teratology teratology /ter·a·tol·o·gy/ (ter?ah-tol´ah-je) that division of embryology and pathology dealing with abnormal development and the production of congenital anomalies.teratolog´ic

ter·a·tol·o·gy
n.
 60:190-205 (1999).

(51.) Graham C, Gealy R, Macina OT, Karol MH, Rosenkranz HS. QSAR for allergic contact dermatitis. Quant Struc-Act Relat 15:224-229 (1996).

(52.) Rosenkranz M, Rosenkranz HS, Klopman G. Intercellular communication, tumor promotion and non-genotoxic carcinogenesis: relationships based upon structural considerations. Mutat Res 381:171-188 (1997).

(53.) Rosenkranz HS, Zhang YP, Klopman G. Structural features contributing to biodegradability. In: Modulation of Cellular Responses in Toxicity, NATO NATO: see North Atlantic Treaty Organization.
NATO
 in full North Atlantic Treaty Organization

International military alliance created to defend western Europe against a possible Soviet invasion.
 Cell Biology Series, vol 93 (Galli CL, Goldberg AM, Marinovich M, eds). Berlin:Springer-Verlag, 1995;91-173.

(54.) Swenberg JA, Short B, Borghoff S, Strasser J, Charbonneau M. The comparative pathobiology pathobiology /patho·bi·ol·o·gy/ (-bi-ol´ah-je) pathology.

path·o·bi·ol·o·gy
n.
The study or practice of pathology with greater emphasis on the biological than on the medical aspects.
 of [alpha]2u-globulin nephropathy. Toxicol Appl Pharmacol 97:35-46 (1989).

(55.) Roe D, Pease W, Florini K, Silbergeld E. Toxic Ignorance. Available: http://www.environmentaldefense.org/ pubs/Reports/ToxicIgnorance/[cited 8 August 2001].

(56.) Zeiger E, Margolin BH. The proportion of mutagens among chemicals in commerce. Regul Toxicol Pharmacol 32:219-225 (2000).

(57.) Rosenkranz HS, Zhang YP, Klopman G. Evidence that cell toxicity may contribute to the genotoxic response. Regul Toxicol Pharmacol 19:176-182 (1994).

(58.) Ashby J, Morrod RS. Detection of human carcinogens. Nature 352:185-186 (1991).

(59.) ter Haar E, Day BW, Rosenkranz HS. Direct tubulin polymerization perturbation perturbation (pŭr'tərbā`shən), in astronomy and physics, small force or other influence that modifies the otherwise simple motion of some object. The term is also used for the effect produced by the perturbation, e.g.  contributes significantly to the induction of micronuclei in vivo. Mutat Res 350:331-337 (1996).

(60.) Tinwell H, Ashby J. Comparative activity of human carcinogens and NTP rodent carcinogens in the mouse bone marrow micronucleus assay: an integrative approach to genetic toxicity data assessment. Environ Health Perspect 102:759-762 (1994).

(61.) Ennever FK, Noonan TJ, Rosenkranz HS. The predictivity of animal bioassays and short-term genotoxicity tests for carcinogenicity and non-carcinogenicity to humans. Mutagenesis 2:73-78 (1987).

(62.) Bartsch H, Malaveille C. Prevalence of genotoxic chemicals among animal and human carcinogens evaluated in the IARC Monograph Series. Cell Biol Toxicol 5:115-127 (1989).

(63.) Shelby MD. The genetic toxicity of human carcinogens and its implications. Mutat Res 204:3-15 (1988).

(64.) Ames BN, Gold LS. Chemical carcinogenesis: too many rodent carcinogens. Proc Natl Acad Sci USA 87:7772-7776 (1990).

(65.) Cohen cohen
 or kohen

(Hebrew: “priest”) Jewish priest descended from Zadok (a descendant of Aaron), priest at the First Temple of Jerusalem. The biblical priesthood was hereditary and male.
 SM, Ellwein LB. Cell proliferation in carcinogenesis. Science 249:1007-1011 (1990).

(66.) Cohen SM, Ellwein LB. Genetic errors, cell proliferation end carcinogenesis. Cancer Res 51:6493-6505 (1991).

(67.) Preston-Martin S, Pike MC, Ross RK, Jones PA. Increased cell division as a cause of human cancer. Cancer Res 50:7415-7421 (1990).

(68.) Butterworth BE. Consideration of both genotoxic and nongenotoxic mechanisms in predicting carcinogenic potential. Mutat Res 239:117-132 (1990).

(69.) Trosko JE, Chang CC, Upham B, Wilson M. Epigenetic epigenetic /epi·ge·net·ic/ (-je-net´ik)
1. pertaining to epigenesis.

2. altering the activity of genes without changing their structure.
 toxicology as toxicant-induced changes in intracellular signaling leading to altered gap junctional intercellular communication. Toxicol Lett 102-103:71-78 (1998).

(70.) Yamaski H, Mesnil M, Omori Y, Mironov N, Krutovskikh V. Intercellular communication and carcinogenesis. Mutat Res 333:181-188 (1995).

(71.) Klaunig JE, Ruch RJ. Biology of disease. Role of inhibition of intercellular communication in carcinogenesis. Lab Invest 62:135-146 (1990).

Address correspondence to A.R. Cunningham, Department of Environmental and Occupational Health, Graduate School of Public Health, University of Pittsburgh, 260 Kappa Drive, Pittsburgh, PA 15238 USA. Telephone: (412) 967-6544. Fax: (412) 624-1020. E-mail: acunningham@server.ceoh.pitt.edu

We gratefully acknowledge the support of the Vira Heinz Endowment.

Received 17 October 2000; accepted 14 March 2001.
COPYRIGHT 2001 National Institute of Environmental Health Sciences
No portion of this article can be reproduced without the express written permission from the copyright holder.
Copyright 2001, Gale Group. All rights reserved. Gale Group is a Thomson Corporation Company.

 Reader Opinion

Title:

Comment:



 

Article Details
Printer friendly Cite/link Email Feedback
Author:Rosenkranz, Herbert S.
Publication:Environmental Health Perspectives
Date:Sep 1, 2001
Words:5363
Previous Article:Gastrointestinal effects associated with soluble and insoluble copper in drinking water. (Articles).
Next Article:Determinants of polychlorinated biphenyls and methylmercury exposure in inuit women of childbearing age. (Articles).



Related Articles
A Tiered Approach for Assessing Children's Exposure.
No More Electronics Dumping in Massachusetts.
HAZARDS ON CAMPUS VIOLATIONS FOUND AT SCHOOLS ACROSS CITY.(News)
CONTAMINATION FOUND AT BASE TAINTED EDWARDS WATER NOT USED FOR DRINKING.(News)
CHEMICAL DUMP AT JAIL STUDIED\Wastes do not pose immediate risk.(NEWS)
U.S. air only fair. (Air Pollution).
Risk communication and public response to industrial chemical contamination in Sydney, Nova Scotia: a case study. (Practical Stuff!).
REACHing for chemical safety.(Spheres of Influence)
Finally, CPSC denies petition to ban phthalates.(United States. Consumer Product Safety Commission)
GAO sounds off on chemical regulation.(Environews / Spheres of Influence)

Terms of use | Copyright © 2009 Farlex, Inc. | Feedback | For webmasters | Submit articles