Disease transmission models for public health decision making: toward an approach for designing intervention strategies for Schistosomiasis japonica. (Articles).Mathematical models
adj. 1. Mechanically determined. 2. Philosophy Of or relating to the philosophy of mechanism, especially tending to explain phenomena only by reference to physical or biological causes. 3. based models of this sort typically have a large number of parameters that pose challenges in reducing parametric uncertainty to levels that will produce predictions sufficiently precise to discriminate among competing control options. We describe here an approach to parameter estimation that uses a recently developed statistical procedure called Bayesian melding to sequentially reduce parametric uncertainty as field data are accumulated over several seasons. Preliminary results of applying the approach to a historical data set in southwestern Sichuan are promising. Moreover, technologic advances using the global positioning system Global Positioning System: see navigation satellite. Global Positioning System (GPS) Precise satellite-based navigation and location system originally developed for U.S. military use. , remote sensing Deriving digital models of an area on the earth. Using special cameras from airplanes or satellites, either the sun's reflections or the earth's temperature is turned into digital maps of the area. , and geographic information systems geographic information system (GIS) Computerized system that relates and displays data collected from a geographic entity in the form of a map. The ability of GIS to overlay existing data with new information and display it in colour on a computer screen is used primarily to promise cost-effective improvements in the nature and quality of field data. This, in turn, suggests that the utility of the modeling approach will increase over time. Key words: disease transmission, mathematical models, parameter estimation, schistosomiasis. Environ Health Perspect 110:907-915 (2002). [Online 12 August 2002] http://ehpnet1.niehs.nih.gov/docs/2002/110p907-915spear/abstract.html ********** In a companion article, Eisenberg et al. (2002) present an approach to the analysis of infectious disease Infectious disease A pathological condition spread among biological species. Infectious diseases, although varied in their effects, are always associated with viruses, bacteria, fungi, protozoa, multicellular parasites and aberrant proteins known as prions. transmission for waterborne pathogens using dynamic models studied via computer simulation techniques. Here we present an application of this approach to designing local control strategies for the parasitic disease A parasitic disease is an infectious disease caused or transmitted by a parasite. Many parasites do not cause disease per se. Parasitic diseases can affect practically all living organisms, from plants to man. The study of parasitic diseases is called by parasitology. schistosomiasis. The schistosomiasis transmission cycle involves mammals and freshwater snail snail, name commonly used for a gastropod mollusk with a shell. Included in the thousands of species are terrestrial, freshwater, and marine forms. Some eat both plant and animal matter; others eat only one type of food. species linked through contact with different forms of the parasite in surface waters. Our work focuses on agricultural villages in the southwestern part of Sichuan Province in China, where schistosomiasis is endemic. The challenge is to determine whether a dynamic modeling approach can be a useful tool in specifying effective intervention strategies. We propose to use the model to integrate general knowledge of the factors controlling transmission of the disease, quantitative data specific to the transmission of schistosomiasis in China, and site-specific data of the sort typically available in these settings. This report is of work in progress in that our activities to date have been concerned with model formulation and its parameterization, particularly in light of the kind of field data commonly generated in rural China. We have not yet designed and implemented an intervention program. However, much of our work has been devoted to analysis of data from a study that culminated in a successful intervention program carried out by our colleagues at the Sichuan Institute of Parasitic Disease over 1987-1995. Regrettably, that intervention was not sustainable because of recurrent annual costs of drug treatment. This underscores that the search is for an intervention strategy that is not only effective but also sustainable in a local context. It is important to point out at the outset that we are not designing intervention trials in a traditional epidemiologic context. Our objective is not to determine whether a particular intervention is effective when all other factors are controlled. For schistosomiasis, there is a considerable body of knowledge about the array of methods of controlling transmission that have been employed in different settings. The task is to determine which blend of the subset of feasible interventions should be used in a particular setting and to predict its probable effectiveness in diminishing disease transmission. To accomplish this task, we require a well-informed computer model of schistosomiasis transmission that can be calibrated cal·i·brate tr.v. cal·i·brat·ed, cal·i·brat·ing, cal·i·brates 1. To check, adjust, or determine by comparison with a standard (the graduations of a quantitative measuring instrument): to local conditions. Eventually, we hope to use the model as a tool for routinely designing the management strategies for the many sites where the disease is endemic. The Disease Schistosomiasis is a waterborne parasitic disease that affects 200 million people and poses a threat to 600 million in more than 76 countries (WHO 1993). The disease is caused by infection by parasitic worms of the genus Schistosoma. These parasites are transmitted via contact with contaminated contaminated, v 1. made radioactive by the addition of small quantities of radioactive material. 2. made contaminated by adding infective or radiographic materials. 3. an infective surface or object. water. The life cycle of the schistosome schistosome /schis·to·some/ (shis´-) (skis´to-som) an individual of the genus Schistosoma. schis·to·some n. begins with the sexual pairing of adult worms in the blood vessels Blood vessels Tubular channels for blood transport, of which there are three principal types: arteries, capillaries, and veins. Only the larger arteries and veins in the body bear distinct names. of the host and the production of copious co·pi·ous adj. 1. Yielding or containing plenty; affording ample supply: a copious harvest. See Synonyms at plentiful. 2. numbers of eggs, a fraction of which are excreted in feces feces or excrement or stools Solid bodily waste discharged from the colon through the anus during defecation. Normal feces are 75% water. The rest is about 30% dead bacteria, 30% indigestible food matter, 10–20% cholesterol and other fats, (or urine in the case of S. haematobium). The eggs hatch in water and release a free-swimming miracidium miracidium /mi·ra·cid·i·um/ (mi?rah-sid´e-um) pl. miraci´dia the first stage larva of a trematode, which undergoes further development in the body of a snail. , whose objective in life is to find and penetrate an appropriate snail in which to develop. After a period of asexual reproduction asexual reproduction n. Reproduction occurring without the sexual union of male and female gametes. , tailed, free-swimming larvae Larvae, in Roman religion Larvae: see lemures. called cercaria cercaria /cer·ca·ria/ (ser-kar´e-ah) pl. cerca´riae the final, free-swimming larval stage of a trematode parasite.cercar´ial cer·car·i·a n. pl. leave the snail and are transported in water, where they actively seek an appropriate vertebrate vertebrate, any animal having a backbone or spinal column. Verbrates can be traced back to the Silurian period. In the adults of nearly all forms the backbone consists of a series of vertebrae. All vertebrates belong to the subphylum Vertebrata of the phylum Chordata. host. Cercaria penetrate the intact skin of the host, thus infecting it. The parasites subsequently mature into adult worms in the host, where they mate to complete the cycle. Four to six weeks after schistosome penetration and once worms have migrated to and settled in the mesenteric veins Noun 1. mesenteric vein - a tributary of the portal vein passing from the intestine between the two layers of mesentery vena mesenterica vein, vena, venous blood vessel - a blood vessel that carries blood from the capillaries toward the heart; "all veins of the vertebrate host, mated adult worms begin to produce eggs. On rare occasions, infected people will experience a severe condition at this time, called Katayama fever, in the Asian form of the disease. The worms themselves cause little or no damage to the body. They are generally undetected by the body's immune system immune system Cells, cell products, organs, and structures of the body involved in the detection and destruction of foreign invaders, such as bacteria, viruses, and cancer cells. Immunity is based on the system's ability to launch a defense against such invaders. because of the ability of the worm's tegument teg·u·ment n. A natural outer covering; an integument. to attach host proteins to itself as a kind of camouflage. In the long term, it is the eggs that are the real culprits of clinical disease. Eggs are carried off in circulation and are sieved by small blood vessels, especially in the liver and spleen spleen, soft, purplish-red organ that lies under the diaphragm on the left side of the abdominal cavity. The spleen acts as a filter against foreign organisms that infect the bloodstream, and also filters out old red blood cells from the bloodstream and decomposes , where the body's immune system attacks them and covers them with fibrotic tissues that accumulate into granulomas. Long-term infections can lead to development of severe lesions that block blood flow. The resulting increase in blood pressure can in turn direct eggs out of the abdominal area into other parts of the body, including the lungs and brain. The tissue damage and lesion development caused in these areas can be fatal in severe cases. Symptoms of chronic infection may include general malaise malaise /mal·aise/ (mal-az´) a vague feeling of discomfort. mal·aise n. A vague feeling of bodily discomfort, as at the beginning of an illness. ; abdominal pain Abdominal pain can be one of the symptoms associated with transient disorders or serious disease. Making a definitive diagnosis of the cause of abdominal pain can be difficult, because many diseases can result in this symptom. Abdominal pain is a common problem. ; headache; enlargement of the liver, spleen, and lymph nodes Lymph nodes Small, bean-shaped masses of tissue scattered along the lymphatic system that act as filters and immune monitors, removing fluids, bacteria, or cancer cells that travel through the lymph system. ; and presence of blood, pus pus, thick white or yellowish fluid that forms in areas of infection such as wounds and abscesses. It is constituted of decomposed body tissue, bacteria (or other micro-organisms that cause the infection), and certain white blood cells. , and mucus mucus /mu·cus/ (mu´kus) the free slime of the mucous membranes, composed of secretion of the glands, various salts, desquamated cells, and leukocytes. mu·cus n. in the stool. Cirrhosis cirrhosis (sərō`səs), degeneration of tissue in an organ resulting in fibrosis, with nodule and scar formation. The term is most often used in relation to the liver, because that organ is most often involved in cirrhosis. may develop as lesions accumulate in the liver. In the continuing absence of a vaccine for schistosomiasis, it is necessary to rely on various environmental and behavioral interventions behavioral intervention Behavior modification, behavior 'mod', behavioral therapy, behaviorism Psychiatry The use of operant conditioning models, ie positive and negative reinforcement, to modify undesired behaviors–eg, anxiety. to diminish risk of infection. Virtually all have been tried in one setting or another. Because water contact is the route of exposure of the vertebrate host, it is possible to identify particularly hazardous aquatic environments and attempt to control access to them by both humans and animals. Alternatively, one may either protect the snails from infection by humans and animals or destroy the snails or their habitat. In China, an ancient and pervasive practice involves mixing human excrement excrement /ex·cre·ment/ (eks´kri-mint) 1. feces. 2. excretion (2). ex·cre·ment n. Waste matter or any excretion cast out of the body, especially feces. , termed nightsoil, with that of animals, which is then used for crop fertilization fertilization, in biology, process in the reproduction of both plants and animals, involving the union of two unlike sex cells (gametes), the sperm and the ovum, followed by the joining of their nuclei. . Where animal involvement is marginal, this practice is central to maintaining the infection in the snail population. Hence, the strategy of enhancing sanitation facilities and conditions employed in other regions of the world to date has not been a viable strategy in China. More commonly, the large-scale use of chemotherapy for humans and animals has been used and has the beneficial effect of controlling morbidity while interrupting the egg burden shed into the environment. Although various combinations of these control strategies have been used quite successfully to reduce the incidence of disease in China, as recently as 1995 approximately 865,000 people and 100,000 water buffalo water buffalo: see buffalo. water buffalo or Indian buffalo Any of three subspecies of oxlike bovid (species Bubalus bubalis). Two have been domesticated in Asia since the earliest recorded history. were infected (Chen 1999). The endemic areas Endemic area A geographical region where a particular disease is prevalent. Mentioned in: Leprosy, Scrub Typhus in 2000 are shown in Figure 1. Control has been particularly difficult in certain regions, including the mountainous areas of Sichuan, where our work has been focused. [FIGURE 1 OMITTED] Schistosomiasis is a disease whose distribution is particularly sensitive to environmental change, most clearly environmental change of human origin. Two events loom that promise major environmental changes: the completion of the Three Gorges Dam Three Gorges Dam, 607 ft (185 m) high and 7,575 ft (2,309 m) long, on the Chang (Yangtze) River, central Hubei prov., China, 30 mi (48 km) W of Yichang. The largest concrete structure in the world, the dam was constructed from 1994 to 2006. on the Yangtze River Yangtze River Chinese Chang Jiang or Ch'ang Chiang River, China. Rising in the Tanggula Mountains in west-central China, it flows southeast before turning northeast and then generally east across south-central and east-central China to the East China in China and the increasing probability of global warming global warming, the gradual increase of the temperature of the earth's lower atmosphere as a result of the increase in greenhouse gases since the Industrial Revolution. . The changes that will be caused by these events promise to have a substantial impact on the distribution and extent of S. japonicum in China. Hotez et al. (1997) have written on the impact of the dam, speculating that the effect will generally be to increase both Oncomelania snail habitat and human disease transmission. More recently, our colleagues in the Sichuan Institute of Parasitic Disease have completed a 3-year project for the Chinese Ministry of Health, in which they reach a similar conclusion for the environment upstream of the dam, although they forecast that the time frame for fully establishing the disease may extend 50-70 years into the future (SIPD SIPD Session Initiation Protocol Daemon 1998). Modeling Schistosomiasis Transmission Mathematical modeling of schistosomiasis transmission began with the work of MacDonald (1965). Considerable further work has occurred since that time (Anderson and May 1991; Woolhouse 1991). Essentially, there have been two approaches: models based on disease prevalence and models based on parasite burden. As discussed more generally by Eisenberg et al. (2002), prevalence models track the number of infected, infectious, or susceptible individuals In epidemiology a susceptible individual (sometimes known simply as a susceptible) is a member of a population who is at risk of becoming infected by a disease, if he or she is exposed to the infectious agent. , whereas models based on parasite burden track the intensity of infection, most commonly mean parasite burden in a population. Because, in the case of schistosomiasis, clinical disease is linked to the duration and intensity of infection, parasite burden models may be preferred (Anderson and May 1991). This is clearly the case for morbidity control programs. Hence, the structure of the model being used in our work follows that of Anderson and May (1985), which tracks mean worm burden in the human population and the mean density of infected snails in the environment. In our variant of the model, we also track the uninfected snail density as well as divide the human population into risk groups generally defined by occupation and residence. In particular, we employ a connected set of models for each of these risk groups, each of identical structure. To date, we have focused on occupational groups comprising farmers, domestics, students, and others (e.g., teachers and administrators) living in a natural village. Residence is indexed by natural village because residential areas are generally included within the boundaries of the land farmed by the villagers who live there. The rationale for dividing the population by residence and occupational group was originally suggested by an analysis of the prevalence data from villages in Sichuan in which the dominant classification variable was residence, with occupation second, followed by other small subgroups defined by task (Maszle 1998). The residence-occupation classification is also attractive because it defines convenient groups around which intervention can be structured. The state equations of the model describe the worm burden, [w.sub.ik], of the ith occupational group living in village k; the average density of infected snails, [z.sub.k]; and the density of uninfected snails, [x.sub.k], in that village. Each of these equations is of similar structure in that the rate of change of each variable with time depends on the difference between the rate at which worms, for example, develop in vivo in vivo /in vi·vo/ (ve´vo) [L.] within the living body. in vi·vo adj. Within a living organism. in vivo adv. and the rate at which resident worms die. Similarly, uninfected snails reproduce, die, or become infected. The mortality rate of infected snails is higher than that of uninfected snails. However, because the fraction of the snail population that is infected seldom exceeds 1% of the total population, the rate of decrease of the uninfected snail population is essentially all due to natural mortality. Although the death rates of worms, infected snails, and uninfected snails are all modeled simply as first-order processes, the processes and rates at which worms develop in humans, the infection process in snails, and the reproduction of uninfected snails in the environment are all complex. That is because these processes depend on environmental variables such as temperature and rainfall, agriculture-related variables such as irrigation irrigation, in agriculture, artificial watering of the land. Although used chiefly in regions with annual rainfall of less than 20 in. (51 cm), it is also used in wetter areas to grow certain crops, e.g., rice. water area and fertilizer use, and variables related to the development and maturation of the parasite in snails and in people. The model and its parameters are described in detail elsewhere (Liang et al. 2002); we summarize its structure and parameters here to illustrate how the model serves as a platform for the integration of the quite diverse data bearing on the intensity of disease transmission and the opportunities for its disruption at a local level (Liang et al. 2002). Figure 2 shows the model and its structural relationships, together with local data inputs. The outputs of the thick-ruled boxes are the state variables [w.sub.ik], [z.sub.k], and [x.sub.k], where [w.sub.ik](t) = mean worm burden in the ith group in environment k; [x.sub.k](t) = mean density of uninfected snails (snails/[m.sup.2] of habitat); and [z.sub.k](t) = mean density of infected snails (snails/[m.sup.2] of habitat). [FIGURE 2 OMITTED] As mentioned above, the common features of the equations are the death processes, denoted by [mu], with corresponding subscripts for worms in vivo, infected snails, and uninfected or susceptible snails. Also, there are three temperature-dependent developmental delays developmental delay n. A chronological delay in the appearance of normal developmental milestones achieved during infancy and early childhood, caused by organic, psychological, or environmental factors. , from human infection to the maturation of the worm in vivo, [[tau].sub.w]; infection of the snail to the time when cercaria are excreted into the environment, [[tau].sub.z]; and the time from snail hatch to adulthood, that is, to infectable status, for the snail, [[tau].sub.s]. The exponential terms depending on the [mu][tau] products in each of the equations are the fraction of the developing population that dies before development is complete. Table 1 provides a summary of the model parameters and environmental variables, together with their units, except four parameters associated with snail and sporocyst sporocyst /spo·ro·cyst/ (-sist) 1. any cyst or sac containing spores or reproductive cells. 2. a germinal saclike stage in the life cycle of digenetic trematodes, produced by metamorphosis of a miracidium and development, discussed below, which do not appear explicitly in Figure 2. The cercarial cercarial pertaining to or emanating from cercariae. cercarial dermatitis see trichobilharzia. concentration is assumed to be directly proportional (Math.) proportional in the order of the terms; increasing or decreasing together, and with a constant ratio; - opposed to See also: Directly to the density of infected snails adjusted by [C.sub.net], the net import or export from or to adjacent villages. Both [C.sub.k](t) and [z.sub.k](t) are spatial averages over k. Because the lifetime of both cercaria and miracidia Miracidium (plural, miracidia) The free-swimming larval form in the life cycle of the liver fluke. Mentioned in: Fluke Infections is less than a day, and the time step of the model for simulation purposes is 1 day, these relationships are algebraic 1. (language) ALGEBRAIC - An early system on MIT's Whirlwind. [CACM 2(5):16 (May 1959)]. 2. (theory) algebraic - In domain theory, a complete partial order is algebraic if every element is the least upper bound of some chain of compact elements. . Because the adult snails live above the waterline, it is clear that rainfall is an important mechanism for flushing cercaria into ditches as well as transporting eggs from the field, where they are distributed in nightsoil, into the ditch environment, where the snails live. Hence, [r.sub.ck](p) is the fraction of the daily production of cercaria that reach the surface water and is a function of the daily precipitation, p(t). The units used for infective infective /in·fec·tive/ (in-fek´tiv) 1. capable of producing infection. 2. infectious (1). in·fec·tive adj. Capable of producing infection; infectious. cercaria and miracidia are based on the premise that both inhabit surface or near-surface water. The miracidial concentration is given by [M.sub.k](t) = [r.sub.ek](p,[[beta].sub.k])[E.sub.k](t). As with the cercaria, [r.sub.ek](p,[[beta].sub.k]) represents the precipitation-dependent fraction of the total daily egg production, [E.sub.k](t), which enters the aquatic environment of the kth village and hatch into miracidia in surface waters. As with cercaria, [E.sub.k](t) includes a transport term, [E.sub.net], to or from adjacent villages. Egg burden into the environment also depends on the fraction of the total nightsoil production used for fertilization, [[beta].sub.k], which varies seasonally and by crop demand. Egg excretion excretion, process of eliminating from an organism waste products of metabolism and other materials that are of no use. It is an essential process in all forms of life. In one-celled organisms wastes are discharged through the surface of the cell. by humans, which drives miracidial production in the absence of significant infected animal populations, depends on the worm burden in all occupational groups living in village k; hence the stacked boxes at the top of Figure 2. Egg excretion is estimated from data from two separate tests, the Kato-Katz test, which involves microscopic examination of fecal fecal /fe·cal/ (fe´k'l) pertaining to or of the nature of feces. fe·cal adj. Relating to or composed of feces. fecal pertaining to or of the nature of feces. smears and results in egg counts, and a miracidial hatch test that is sometimes used in China to detect infection. These data are fitted to a statistical model whose parameters [k.sub.ik], r, and h are estimated from local data and embedded Inserted into. See embedded system. in the mathematical model of Figure 2 (De Vlas et al. 1992) Temperature enters the model in several additional ways. First, the infectivity infectivity ability of an agent to infect. of cercaria is known to be temperature dependent and is reflected in the model through the unit-free infectivity function [I.sub.c]([T.sub.1]), where [T.sub.1] is water temperature. A similar phenomenon exists for miracidia, which is similarly represented by [I.sub.m]([T.sub.1]). Hence, [C.sub.k] and [M.sub.k] are effective concentrations after adjusting for temperature-dependent infectivity. Also, the time delay between infection of the snail by a miracidia and the development of the sporocyst to a point where cercaria begin to be excreted is temperature dependent and represented by the delay time, [[tau].sub.z]. Maszle (1998) developed a degree-day model that specifies [[tau].sub.z] from the local temperature time series, a formulation that we continue to employ. However, the degree-day models for both infected and uninfected Oncomelania snails depend on temperature not of the water but of the microenvironment microenvironment /mi·cro·en·vi·ron·ment/ (-en-vi´ron-ment) the environment at the microscopic or cellular level. along the ditches above the waterline. The function B(t - [[tau].sub.s], [T.sub.2], p) is the effective per capita [Latin, By the heads or polls.] A term used in the Descent and Distribution of the estate of one who dies without a will. It means to share and share alike according to the number of individuals. reproduction rate of uninfected snails, which also depends on the microenvironmental temperature [T.sub.2] and rainfall, p. At this point, it is clear that the model is structured to integrate very diverse information both from the field and from laboratory investigations regarding factors influencing the life cycle of snails and the biology of the schistosome. The challenge is to move from structural issues to quantitative forecasts of infection rates in humans and in snails. This requires moving from functional relationships to numbers. Model Parameters At this point in our exposition, experienced modelers will be questioning the level of detail of the model presented above and the data that exist to yield realistic parameter estimates. Unquestionably un·ques·tion·a·ble adj. Beyond question or doubt. See Synonyms at authentic. un·ques tion·a·bil ,
the success of our approach rests on narrowing the uncertainty in
important parameters to a degree that will result in sufficiently narrow
ranges of uncertainty in the predicted outputs; the uncertainty in the
outputs determines the resolution with which one can compare candidate
intervention strategies. Hence, the parameter estimation issue is
central. As discussed below, our formal approach to parameter estimation
results in explicit information on residual parametric uncertainty at
each point of the analysis. As a prelude, however, in Table 1 the
parameters of the model are divided into three groups, biologic,
measurable, and spatial, based on the nature and extent of data
available for their estimation.Biologic parameters. Biologic parameters are those that might be expected to be relatively invariant (programming) invariant - A rule, such as the ordering of an ordered list or heap, that applies throughout the life of a data structure or procedure. Each change to the data structure must maintain the correctness of the invariant. across regions of similar ecology and single snail species, for example, the mountainous endemic areas of Sichuan. Among these parameters are the natural death rate of infected snails, [[mu].sub.z], and parameters that depend principally on human or parasite physiology, for example, the death rate of worms in the body, [[mu].sub.w]. The proportionality constants [alpha] and [rho], the egg model parameters r and h, and the developmental delay [[tau].sub.w], the time between cercarial penetration to the mature worm, are all biologic parameters. The data available for estimating/constraining these biologic parameters consist of published experimental data (e.g., h, r, [[mu].sub.z], and [[mu].sub.w]) as updated by infection data collected in epidemiologic surveys epidemiologic survey, n See research, epidemiologic survey. of the villages. Thus, one of the most important challenges of our approach is to use data integration techniques that give proper weight to each source of data. Measurable parameters. The measurable parameters are those that can be at least approximated from site-specific data. Clearly, the areas of habitat and surface water are estimable es·ti·ma·ble adj. 1. Possible to estimate: estimable assets; an estimable distance. 2. Deserving of esteem; admirable: an estimable young professor. from field surveys (Seto et al. 2001). A more complicated example is the parameter [s.sub.i](t), which reflects the intensity of water contact of an average person in occupation i. This quantity varies with season and is intuitively quite important. The parameter [s.sub.i](t) can be estimated from monthly time-activity questionnaire data or using the more sophisticated methods of Ross et al. (1998). We assume [s.sub.i](t) estimates to be valid across a region for villages engaged in similar agriculture. Spatial parameters. The spatial parameters are those that can currently be estimated only from site-specific longitudinal data that allow the model to be fit to initial and final values of state variables via simulation studies. That is, presently these parameters cannot be estimated independently of the model. These parameters are [[gamma].sub.ik] and [[xi].sub.k]. The notion is that they will both equal unity if cercaria and miracidia are uniformly distributed in the surface water system, but both can be larger or smaller than unity. For example, if cercaria and human water contact patterns have different spatial distributions over the water system, one might expect [[gamma].sub.ik] to be small, reflecting that the worm burden is less than one might expect from the number of infected snails and the intensity of water contact. If [[gamma].sub.ik] is large--that is, if human water contact occurs where infected snails are concentrated--it suggests the converse, together with the implication that an environmental intervention, either focal application of molluscicide molluscicide an agent used for killing molluscs (mainly snails and slugs), e.g. copper sulfate, metaldehyde, methiocarb. molluscicide Public health A chemical which kill snails or mollusks or ditch alterations, might have a significant impact on transmission intensity. To specify such an intervention would require spatial data Data that is represented as 2D or 3D images. A geographic information system (GIS) is one of the primary applications of spatial data (land maps). See spatial analysis, spatial resolution and GIS glossary. that would allow targeting snail clusters proximate proximate /prox·i·mate/ (prok´si-mit) immediate or nearest. prox·i·mate adj. Closely related in space, time, or order; very near; proximal. proximate immediate; nearest. to water contact locations associated with the ith risk group, perhaps a popular clothes-washing site. As noted above, the challenge is to estimate the various parameters of the model to a degree of precision that will allow discrimination of the effects of various simulated interventions in the presence of residual uncertainty. As outlined by Eisenberg et al. (2002), we begin by assigning to each parameter of the model a distribution function reflecting current uncertainty of its value at each stage of the study. The essence of our strategy is to refine these estimates from new information. There are two dimensions of refining our knowledge, the acquisition and integration of site-specific data and the statistical methods of updating the parameter estimates. Computer simulations are central to both aspects. Local Data Sources Our efforts to date have focused on adapting the model to incorporate the nature and extent of site-specific data. In this context, much of our work is based in the Anning River Valley of southwestern Sichuan. Villages were selected as being typical of the environment of about 90% of the population in the Daliang mountainous region. The living and working styles of people in a residential group are usually very similar, and the fields that they farm are usually adjacent to their housing areas. In general, the agriculture typical of the river valley plains does not rely heavily on animal husbandry animal husbandry, aspect of agriculture concerned with the care and breeding of domestic animals such as cattle, goats, sheep, hogs, and horses. Domestication of wild animal species was a crucial achievement in the prehistoric transition of human civilization from ; hence, the animal populations are relatively small in comparison with the high mountain valley regions, also found in the Daliang region. Within the Chuanxing township, which is typical of the area, the maximum elevation is 2,010 m in the north, dropping to 1,530 m in the south. The climate is subtropical sub·trop·i·cal adj. Of, relating to, or being the geographic areas adjacent to the Tropics. subtropical Adjective of the region lying between the tropics and temperate lands , with an annual average temperature of 17[degrees]C and annual rainfall of about 1,000 mm, over 90% of which falls between the beginning of June and the end of October. The main agricultural products are rice, wheat, garlic, eggplant eggplant, name for Solanum melongena, a large-leaved woody perennial shrub (often grown as an annual herb) of the family Solanaceae (nightshade family), and also cultivated for its ovoid fruit. , and tomatoes, although more diversified vegetable crops and flowers are increasingly common. A complex irrigation system was substantially expanded in the late 1970s. Rainfall and mountain runoff Runoff The procedure of printing the end-of-day prices for every stock on an exchange onto ticker tape. Notes: If the "tape is late" then it can take a long time to print off all the closing prices. feed the irrigation system in the wet season, and during the dry season, water can be pumped from Qionghai Lake, several kilometers to the south. Since the expansion of the irrigation system, the prevalence of schistosomiasis has increased in the area. In Minhe village, for example, the infection rate was 32% in 1977, 38% in 1978, 39% in 1980, 49% in 1984, and 57% in 1987. An important factor to sustaining the disease cycle in this area is that fertilization practices make extensive use of nightsoil that is moved from residential pit latrines to field storage pits without treatment and with minimal holding times. Snail habitat is principally on the margins of irrigation ditches because they offer year-round moisture and a relatively stable habitat, unlike the farmed areas themselves. A typical ditch network mapped using the Global Positioning System (GPS) is available online (Seto and Liang 2002) or in Seto et al. (2001). In those regions of China in which schistosomiasis is endemic, there are units organized within county health departments whose focus is on surveillance and control of the disease. They are supported by sections of the provincial health departments and by both research- and surveillance-based activities at the national level that are, in turn, in touch with relevant units of the World Health Organization. This has standardized methods and protocols to differing degrees at the provincial, national, and international levels. In Sichuan, field data that can be collected, given adequate resources, include the following. Human prevalence. Prevalence surveys may begin with an immunologic immunologic, immunological emanating from or pertaining to immunology. immunologic competence see immunocompetence. immunologic domains screen that, if positive, is followed by examinations of fecal samples. As mentioned above, this might involve a miracidial hatch test and/or Kato-Katz quantitative egg counts for those with positive hatch test. Infection histories are often available for each individual based on these data. If animal populations are significantly involved in transmission, similar techniques are used to determine their infection status. Snail survey. In our work, this now begins with ditch-mapping procedures using the GPS, as noted above, an aspect of which allows sampling of sites and estimation of snail density and the extent of habitat by location on the ditch network. The fraction of the snail sample that is infected is typically very small; hence, knowledge of the spatial distribution of infected snails is generally very poor. This motivates the cercarial bioassay Bioassay A method for the quantitation of the effects on a biological system by its exposure to a substance, as well as the quantitation of the concentration of a substance by some observable effect on a biological system. . Cercarial bioassay. Bioassay data are obtained at various locations on the ditch networks at particular times, generally at the height of the mid-summer infection cycle. The procedure involves exposure of one cage of five mice per location to the surface water in the ditch for a total exposure period of 10 hr. Because the exposures are integrated over multiple days, good information is gained on the relative hazard of each location if the timing of the assays is reasonably coincident co·in·ci·dent adj. 1. Occupying the same area in space or happening at the same time: a series of coincident events. See Synonyms at contemporary. 2. . This provides a crude measure of the spatial variation in cercarial concentration. Water contact survey. This collects one-point-in-time questionnaire data, generally early in any site-specific investigation, and it may be the least commonly collected of the items on this list. It allows estimates of the relative intensity of water contact by season and occupation and informs the parameter [s.sub.i](t), as discussed above. In Sichuan, stratified stratified /strat·i·fied/ (strat´i-fid) formed or arranged in layers. strat·i·fied adj. Arranged in the form of layers or strata. random sampling procedures are often used with about 25% population samples. Agricultural and environmental data. It is becoming increasing clear that the intensity of transmission is closely connected to the types of crops grown and associated fertilizer use demands. Information on these issues is available both from records of the administrative village and from local interviews. Also, air temperature and rainfall data are regionally available. There is also considerable variability in the animal population in these villages as well as in the potential for their participation in the transmission cycle. However, it is clearly much less of an issue in this area than it is on the lower Yangtze River, where water buffalo are centrally involved (Chen and Zheng 1999). Simulation Strategy For any risk group, most of the parameters of the model are biologic parameters--parameters that are likely to be relatively invariant over large regions and, ideally, over time. This is desirable because estimates of the range of values for these parameters can be extrapolated from one site to another, as well as narrowed with experience over time. However, for any village, there are three to five occupational classes, all of which are likely to have some level of infection within them, which means that they must be accounted for in calculating the egg burden to the village environment. So even though there is a modest number of occupational or mixed occupational and site-specific parameters such as [s.sub.i](t), [k.sub.ik], and [[gamma].sub.ik], they proliferate pro·lif·er·ate v. To grow or multiply by rapidly producing new tissue, parts, cells, or offspring. quickly as the number of groups increases. Whether or not this is a problem depends on the relationship of the number of parameters and the amount of data available to estimate them. For example, adding a new village and its data to the analysis is much less problematic than is subdividing the data from a particular village into a larger number of risk groups. The issue of grouping or aggregation of the population becomes particularly important when exploring the interaction of one village with the next, either in terms of human infection or that of snails. Zhou et al. (1997) showed that there is significant spatial correlation in the Chuanxing data set for infection-related variables between adjacent villages, but not of such variables as uninfected snail density or human water contact frequency. Hence, we expect that the final definition of risk groups will be based on both infection data and spatial features, the latter related to the clear importance of surface water transport of cercaria and miracidia. In that regard, a separate aspect of our work relates to the use of satellite imagery Satellite imagery consists of photographs of Earth or other planets made from artificial satellites. History The first satellite photographs of Earth were made August 14, 1959 by the US satellite Explorer 6. for the identification of snail habitat as well as other remotely observable landscape data. For example, we have recently acquired high-resolution satellite images (IKONOS) of 20 villages near Qionghai Lake near Xichang to match with all of these other data items in the foregoing list in an attempt to understand the importance of landscape-related risk factors. Our current modeling work is aimed at using historical data from Chuanxing township to refine the estimates of the biologic parameters available from the literature. Maszle (1998) conducted an extensive review of the relevant literature for this purpose, which forms the first generation of parameter estimates. The second generation will result from the analysis of two cross-sectional surveys in Chuanxing, the first in 1987 and the second in 1989. In 1987, a complete prevalence survey was conducted in all 12 villages, together with snail and time-activity surveys. This analysis collapsed the 12 villages and five occupations into seven relatively homogeneous groups. This means of forming the initial risk groups was based on the premise that, in 1987, the population was in a state of dynamic equilibrium dy·nam·ic equilibrium n. See equilibrium. with the environment insofar in·so·far adv. To such an extent. Adv. 1. insofar - to the degree or extent that; "insofar as it can be ascertained, the horse lung is comparable to that of man"; "so far as it is reasonably practical he should practice as there had been no widespread chemotherapy in humans before that time. The first-generation parameter estimates and the 1987 data comprise the initial conditions for the simulation study. After the 1987 prevalence surveys, all infected individuals were treated with prazi-quantel, the drug of choice for treatment of schistosomiasis. This compound kills the adult worms in vivo in a single course of treatment with about 95% effectiveness. There was also some use of molluscicide before the 1988 infection season, but subsequent snail surveys showed this to have been ineffective. The second prevalence survey, carried out in 1989, provides a target outcome for model calibration, as detailed below. The form of the simulation studies that we are using for this analysis is similar to the form we have used in previous studies (Eisenberg et al. 1996; Grieb et al. 1999; Spear and Hornberger 1980; Spear et al. 1991). In short, given the model and the first generation of parameter distributions, it is possible to run sets of Monte Carlo simulations Monte Carlo Simulation A problem solving technique used to approximate the probability of certain outcomes by running multiple trial runs, called simulations, using random variables. , each resulting in a predicted outcome at the time of the 1989 cross-sectional survey. The missing element is the specification of the criteria for assessing which, if any, of these outcomes matches the actual outcome observed in the field. This is not a simple matter. Although we have reasonable data on disease prevalence and worm burden based on the egg excretion data, we have very limited knowledge of the infected snail density. However, there are some cercarial bioassay data that might allow a crude rank ordering of infected snail density by village. Because of the considerable uncertainty in assessing goodness of fit Goodness of fit means how well a statistical model fits a set of observations. Measures of goodness of fit typically summarize the discrepancy between observed values and the values expected under the model in question. Such measures can be used in statistical hypothesis testing, e. in problems of this sort, in the past we have used binary criteria for assessing the degree to which the model captures the principal characteristics of the field data. The criteria are generally specified as a number of conditions on the output, which in this case include disease prevalence, a worm burden that lies within an acceptable range of values about the 1989 field estimates, and an upper bound on the density of infected snails based on the density of uninfected snails from surveys in each village. Hence, the infection-related outcomes pertain to pertain to verb relate to, concern, refer to, regard, be part of, belong to, apply to, bear on, befit, be relevant to, be appropriate to, appertain to each risk group, and the snail-related outcome, to each village. The end result of a set of Monte Carlo Monte Carlo (môNtā` kärlō`), town (1982 pop. 13,150), principality of Monaco, on the Mediterranean Sea and the French Riviera. runs is then [n.sub.g] good simulations (passes) and [n.sub.b] bad ones (not passes). Associated with each run is the parameter vector that gave rise to a simulation that met the goodness-of-fit criteria or that did not. These vectors contain the information from which the second generation of parameter distributions is estimated. Through this calibration procedure, parameter uncertainty can be reduced and the model made specific to the set of villages and risk groups under study. As more data from future research become available, additional pass/not-pass criteria can be defined, and the model parameters can be better refined, resulting in third-generation, fourth-generation, and so on, parameter estimates. However, after the second-generation parameter estimates, we have a calibrated model, which can be used for prediction and the evaluation of intervention strategies. Although we have had considerable practical success with the pass/not-pass methodology, it transpires that it is a special case of a Bayesian approach recently proposed by Poole and Raftery (2000) that they call Bayesian melding. We believe that their generalization and formalization for·mal·ize tr.v. for·mal·ized, for·mal·iz·ing, for·mal·iz·es 1. To give a definite form or shape to. 2. a. To make formal. b. of the means of dealing with parametric uncertainty, when applied to deterministic models Deterministic models Liability-matching models that assume that the liability payments and the asset cash flows are known with certainty. Related: Stochastic models. of the sort typified by the schistosomiasis model, expand the potential of the overall approach that we have proposed above. Because the issue of parameter estimation lies at the practical core of our work, we now outline the Bayesian melding approach. Parameter Estimation and Uncertainty Analysis: Bayesian Melding In the approach we outline above, the models are used for two purposes. Ultimately, they are used to perform virtual field experiments to compare the performance of competing intervention strategies. We refer to this goal as prediction. However, before prediction can be performed, it is important that model parameters have been well estimated. Although we have based parameter estimates on the best available literature and field data, residual uncertainty still exists, which we would like to reduce. We can refine these parameter estimates by statistically comparing the output predicted by the model with observed outcomes. In essence, we must reconcile what we know to be reasonable outputs of the model with outputs that are induced by running the model on what we also believe to be reasonable input parameters. In fact, for some input parameters for which we have no prior information--notably, the spatial parameters--the model and output data provide the only means for estimation. Because this situation requires several disparate sources of data to be integrated in estimating the parameters of interest, a Bayesian approach lends itself to estimation in this complicated and somewhat messy situation. An iterative it·er·a·tive adj. 1. Characterized by or involving repetition, recurrence, reiteration, or repetitiousness. 2. Grammar Frequentative. Noun 1. process allows for the comparison of information from past experience with future data to further refine estimation and calibration of the disease models. In the fortunate circumstance that a detailed time series on one of the outcome variables (such as disease prevalence) has been recorded, least-squares or maximum likelihood techniques can be used to estimate the parameters (Eisenberg et al. 2002). Such detailed data are most commonly available in acute, outbreak situations. These procedures have been also adopted to account for prior information on the parameters by using a traditional Bayesian approach (Raftery et al. 1995), where one can define both priors on the inputs and likelihood on the outputs, given the model, input parameters, and data. The data associated with schistosomiasis, however, are different, in that disease prevalence in humans is measured annually at most and typically not every year. In addition, there will be information on other state variables, such as the density and infection rate of snails, also measured at most annually. Finally, there is also expert opinion regarding plausible trajectories of the state variables, and these are typically a small subset of the possible trajectories that the model can produce and that match the sparse data. Technically, the information available can be translated into prior information on the input parameters and prior information on the output state variables. As discussed above, the pass/not-pass method is one that identifies parameter sets consistent with reasonable output state-variable time series. Others have introduced metrics to define distance between model outputs and expected characteristics of these model outputs, such as frequency and magnitude of oscillations oscillations See Cortical oscillations. (Kendall et al. 1999). The Bayesian melding approach unifies procedures that combine prior information regarding both input parameters and model output to further constrain the acceptable solution space of the input parameters. In Bayesian melding, two priors on the output are compared. One prior is based on literature or field data as to what is reasonable output. The other prior on the output is induced by running the model on valid prior information on input parameters. These two output priors are "melded" together and inverted inverted reverse in position, direction or order. inverted L block a pattern of local filtration anesthesia commonly used in laparotomy in the ox. to the input parameter space In generative art people talk about parameter space as the set of possible parameters for a generative system. In statistics one can study the distribution of a random variable. Several models exist, the most common one being the normal distribution (or Gaussian distribution). , thereby refining the estimate of the input parameters. In detail, and using Poole and Raftery's terminology, let [1] M:[theta Theta A measure of the rate of decline in the value of an option due to the passage of time. Theta can also be referred to as the time decay on the value of an option. If everything is held constant, then the option will lose value as time moves closer to the maturity of the option. ] [right arrow] [phi], [theta] [member of] [PHI] [subset or equal to] [R.sup.n], [phi] [member of] [PHI] [subset or equal to] [R.sup.p], where M is the deterministic model deterministic model one in which each variable changes according to a mathematical formula, rather than with a random component. that relates an n-vector of input parameters, [theta], to a p-vector of outputs: [2] [phi] = M([theta]). Using an example drawn from our model, one component of [theta] might be the input h, the number of eggs/worm pair/stool quantity, and a component of [phi] might be the output [w.sub.ik](t), the worm burden in the ith village, kth risk group at time t. Define the posterior, joint model of inputs and outputs to be [3] [pi]([theta],[phi]) [varies] {p[[theta],M([theta])] if [phi] = M([theta]) 0 otherwise}, where p[[theta],M([theta])] is the premodel joint distribution. One can think of p[[theta],M([theta])] as containing the statistical information and relationships among the parameters and state variables before considering how these inputs determine the outputs, [phi]. The post-model joint distribution, [pi]([theta],[phi]), however, only puts mass on input/output combinations consistent with the model, so it is a rescaled version of p[[theta],M([theta])] with the mass of the impossible input/output combinations set to 0. In the schistosomiasis model, for instance, if the prior p[[theta],M([theta])] allows positive probability on the combination h = a and [w.sub.ik](t) = b, whereas the structure of the model suggests such a combination could never exist (although each value is acceptable in different combinations), then the posterior puts mass 0 on (a,b).The interesting distribution with respect to the estimation of input parameters is the marginal posterior of the inputs, or, [4] [pi]([theta]) [varies] p[[theta], M[theta])]. As discussed above, we will ignore the possibility of having sufficient data to construct meaningful likelihood on the outputs. Thus, one can typically write the prior as [5] p([theta],[phi]) [varies] [q.sub.1]([theta])[q.sub.2]([phi]), where [q.sub.1] and [q.sub.2] are the prior distributions for [theta] and [phi], respectively. Because [phi] = M([theta]), the model M and the prior [q.sub.1] induce another, independent prior on [phi], say, [q.sub.1]([phi]). Bayesian melding is a method for reconciling these two priors on the output, resulting in a single prior, say, q([phi]). The final step is to invert in·vert v. 1. To turn inside out or upside down. 2. To reverse the position, order, or condition of. 3. To subject to inversion. n. Something inverted. q([phi]) to get a marginal, posterior distribution on the input parameters, [pi]([theta]). The overall approach is illustrated at the top of Figure 3. The distillation distillation, process used to separate the substances composing a mixture. It involves a change of state, as of liquid to gas, and subsequent condensation. The process was probably first used in the production of intoxicating beverages. of the above technical discussion is that Bayesian melding takes existing information on the input parameters in the form of a prior distribution, [q.sub.1]([theta]), and new information/expert opinion on the outputs, [q.sub.2]([phi]), and constructs new, refined information on the parameter inputs, [pi]([theta]). Note that the pass/not-pass procedure simply places a uniform prior on a subspace Noun 1. subspace - a space that is contained within another space mathematical space, topological space - (mathematics) any set of points that satisfy a set of postulates of some kind; "assume that the topological space is finite dimensional" of [PHI], [q.sub.2]([phi]) [varies] I([phi] [member of] [[PHI].sup.S], where [[PHI].sup.S] is the acceptance region of [PHI]. Unlike traditional Bayesian analysis Bayesian analysis A decision-making analysis that '…permits the calculation of the probability that one treatment is superior based on the observed data and prior beliefs…subjectivity of beliefs is not a liability, but rather explicitly allows , Bayesian melding requires priors on the inputs, priors on the outputs, and a somewhat arbitrary specification of how [q.sub.2]([phi]) and [q.sub.1]([phi]) are to be melded (relative weights given to each distribution) to get q([phi]). [FIGURE 3 OMITTED] Bayesian melding can be applied iteratively, adding new field data over time, to progressively refine parameter estimates. Using our field research, in China, we begin with a field study to construct [q.sub.2,1]([phi]) (subscript (1) In word processing and scientific notation, a digit or symbol that appears below the line; for example, H2O, the symbol for water. Contrast with superscript. (2) In programming, a method for referencing data in a table. I is for first field season) and combine with existing prior information on the input parameters, [q.sub.1]([theta]), using Bayesian melding to get, first, posterior estimate of the input parameters, say, [[pi].sub.1]([theta]). In the next field season, we again collect new data to get [q.sub.2,2]([phi]) and use as input prior last years distribution, [[pi].sub.1]([theta]), now as a prior input parameter distribution to get a new postmodel distribution, [[pi].sub.2]([theta]). For every new collection of field data, this process is repeated and, ideally, the postmodel distribution becomes "tighter" as more information is collected. The bottom part of Figure 3 shows schematically how this process works. As more is known about the transmission process for a particular disease, the more potentially complicated one can make the mathematical models. Increasing complexity typically involves the addition of more input parameters, such as the addition of occupation as a risk factor in the models described above. Another consequence is that the models have a greater variety of possible patterns in the output state variables. It also increases the potential for non-invertibility of the models--the potential that different sets of input parameters will result in the identical output series, or, [6] M([[theta].sub.1])= M([[theta].sub.2],) = [phi], [[theta].sub.1] [not equal to] [[theta].sub.2]. What this implies is that strong (possibly nonlinear A system in which the output is not a uniform relationship to the input. nonlinear - (Scientific computation) A property of a system whose output is not proportional to its input. ) relationships among some of the parameters will characterize the joint posterior distribution. Strong relationships among some parameters imply that the available data on the output series cannot identify these parameters but only linear or nonlinear composites of them. Finding these sets of parameters either can help identify parameters that need independent data or may suggest new ways to parameterize pa·ram·e·ter·ize also pa·ram·e·trize tr.v. pa·ram·e·ter·ized also pa·ram·e·trized, pa·ram·e·ter·iz·ing also pa·ram·e·triz·ing, pa·ram·e·ter·iz·es also pa·ram·e·triz·es these models that can reduce unnecessary redundancy. Most procedures that attempt to estimate the marginal posterior, [pi]([theta]), do so not by finding the distribution directly but by methods that generate random samples from the underlying distribution of interest, one example being the pass/no-pass method. The result is repeated draws from [pi]([theta]). So, finding linear and nonlinear relationships among the parameters is an exercise in multivariate The use of multiple variables in a forecasting model. density estimation In probability and statistics, density estimation is the construction of an estimate, based on observed data, of an unobservable underlying probability density function. The unobservable density function is thought of as the density according to which a large population is and principal components analysis. Tree-based density estimation is a nonparametric multivariate density estimation technique particularly well suited to estimation of high-dimensional data (Spear et al. 1994). In addition, newly developed nonlinear principal components (Bakshi and Utojo 1998) permit the discovery of strong nonlinear relationships among the parameters that conventional principal components methods would not discover. Uncertainty Analysis Consider now that a posterior distribution of the model parameters has been estimated. Estimating the posterior distribution, [pi]([theta]), provides an estimate of the uncertainty of input parameters. It does not, however, measure the cost of this uncertainty, where cost is defined to be the uncertainty of the predicted output series, [phi]. As discussed above, repeated simulations of the model based on random draws from the parameter distribution can be used to evaluate model sensitivity to parameters. More generally, these simulations can be used to evaluate the cost of sensitivity on output uncertainty, a process called uncertainty analysis (Morgan et al. 1990). Note that uncertainty in the output is a function of both uncertainty in the inputs and the sensitivity of the outputs to changes in the inputs. For instance, estimation of [pi]([theta]) might imply that a particular parameter--say, [[theta].sup.*]--is very poorly estimated (marginal distribution In probability theory, given two jointly distributed random variables X and Y, the marginal distribution of X is simply the probability distribution of X ignoring information about Y of [[theta].sup.*] has large variance), but if [phi] is insensitive to changes in this parameter, the uncertainty of [[theta].sup.*] does not propagate prop·a·gate v. 1. To cause an organism to multiply or breed. 2. To breed offspring. 3. To transmit characteristics from one generation to another. 4. into uncertainty in the prediction. To direct research efforts in the future to construct more reliable models, we should identify parameters that have the biggest cost with respect to their uncertainty. As mentioned above, for instance, how does the uncertainty/inaccuracy in measuring local rainfall translate into uncertainty on the model predictions of the prevalence of schistosomiasis in humans? Uncertainty analysis should be done on groups of correlated parameters as discovered using the methods described above. One method to find the parameters that contribute the most to uncertainty in the outputs is to fix all but one parameter or group of correlated parameters and record the variance in the output when the remaining parameters are allowed to vary according to according to prep. 1. As stated or indicated by; on the authority of: according to historians. 2. In keeping with: according to instructions. 3. [pi]([theta]). By comparing the results, one can target field research to better identify those parameters that contribute most to uncertainty of the output. Concluding Example An example of the general strategy outlined above is based on the historical data from the Chuanxing villages. The most highly infected risk group was the residents of a village where 81.9% of all villagers above 5 years of age were infected in 1987. All villagers were treated with praziquantel praziquantel /pra·zi·quan·tel/ (pra?zi-kwahn´t'l) a broad-spectrum anthelmintic used for the treatment of a wide variety of fluke and tapeworm infections. pra·zi·quan·tel n. in October 1987 and August 1988, which reduced the infection rate to 19.3% in 1989. In simulating the infection experience of these villagers over this interval, we used an earlier version of the model without the spatial parameters [[gamma].sub.ik] and [[xi].sub.k] and the rainfall effects parameters r(p). All of the prior parameter distributions of the model were defined to be uniform, some based on data from the literature and some based on local data as outlined above, and Monte Carlo simulations were performed. The calibration trajectories on the left side of Figure 4 are from those simulations that were judged to be consistent with the field data for three risk groups from the 1987 infection surveys. As discussed above, criteria for a good simulation were based on a close match to the 1989 prevalence data, an upper bound on infected snails, and a lower bound on the egg excretion values, given the 1987 initial conditions. All of the trajectories shown in Figure 4 met the criteria, which illustrates that more than one set of parameters can be consistent with the calibration conditions. However, only 62 of the 10,000 simulations met these criteria, so the posterior parameter space has been significantly constrained. [FIGURE 4 OMITTED] Our experience has shown that only a small subset of simulations are "good," generally [less than or equal to] 1% of the total. If we compare the posterior space with the prior space for two model parameters, h and k (Figure 5), we can see begin to understand how parameter distributions are refined in multivariate space through our methodology, with acceptable parameter combinations lying in the upper right quadrant of the prior space, substantially reducing the uncertainty in these two parameters. Here, the situation with just two parameters can be easily understood. However, one generally observes that, among parameter sets resulting in good simulations, some parameters range over almost their entire prior distribution range. These two observations suggest that the second- and subsequent-generation parameter spaces are very complex and that more sophisticated multivariate techniques must be used to explore the posterior parameter spaces. [FIGURE 5 OMITTED] Now that we have calibrated the model to fit our village, to illustrate the exploration of control strategies, we used the 62 parameter vectors to forecast the effects of a sustained intervention among the three groups commencing in 1989, during which only students were administered chemotherapy annually. These results are shown on the right side of Figure 4. Clearly, if this village were isolated such that no cercaria or eggs were imported from neighboring neigh·bor n. 1. One who lives near or next to another. 2. A person, place, or thing adjacent to or located near another. 3. A fellow human. 4. Used as a form of familiar address. v. villages, the results suggest that annual mass chemotherapy would be effective in maintaining a low worm burden and low prevalence of infection among students, but that little benefit would be afforded the farmers or domestic workers. In this particular case, the variability about the mean trajectories shown in Figure 4 is modest, largely because of the extent of data available from the Chuanxing studies. We cannot expect that to be the case in forecasting studies based on current surveillance data, and much of our current work focuses on identifying key parameters about which improved estimates would have a significant impact on the variability of forecasts of control effectiveness. Although such examples raise a variety of questions about the model and its parameterization, the strategic point, we hope, is clear. If we can capture the principal elements of the disease cycle in the structure of the model and demonstrate that it can be parameterized from local data at reasonable cost and with acceptable residual uncertainty, the notion of designing interventions using the model becomes an attractive and, ideally, an effective management tool.
Table 1. Model parameters, variables, and inputs.
Parameters Interpretation and units Values
Biologic
[[tau].sub.w] Worm development delay, 20-30
infection to maturity in
humans (days)
[[mu].sub.w] Worm mortality rate (per capita 0.000456-0.0014
per day)
h Eggs excreted per worm pair per 0.728-2.56
gram stool
r Aggregation of eggs in stool 0.1-10
sample at constant worm burden
[[gamma].sub.w] Density dependence of worm 0.001
establishment in vivo
[[tau].sub.z] Sporocyst development delay to 60-83
cercarial release (days)
[[mu].sub.z] Patent and latent snail death 0.0042-0.0074
rate (snails per snail per
day)
[sigma] Cercarial production per 3-26
sporocyst per day
[[tau].sub.s] Snail development delay, egg 71-115
hatch to infectable age (days)
[[mu].sub.s] Snail mortality rate (per capita 0.0023-0.01
per day)
[B.sub.m] Maximum snail reproduction rate 0.2-1.1
(eggs per snail per day)
[alpha] Schistosome acquired per 0.0001-0.5
cercaria per square meter
contact
[rho] Probability of snail infection 0.000001-0.0005
per miracidium per square
meter surface water
Measurable
[w.sub.ik](0) Initial worm burden in the ikth Local data
group
[x.sub.k](0) Initial snail density Local data
[z.sub.k](0) Initial infected snail density Local data
[s.sub.i] Average water exposure for the Local data
ith group [exposure area
([m.sup.2]/contact/day)]
[k.sub.ik] Worm aggregation parameter Local data
[A.sub.hk] Snail habitat area ([m.sup.2]) Local data
[A.sub.sk] Surface water area ([m.sup.2]) Local data
[[beta].sub.k] Fraction of nightsoil used for Local data
fertilization
Spatial
[[gamma].sub.ik] Spatial index for the 1 (default value)
distribution and interaction
between human exposure and
cercaria
[[xi].sub.k] Spatial index for the 1 (default value)
distribution and interaction
between snails and miracidia
Inputs
p Rainfall (mm/day) Local data
[T.sub.1] Water temperature ([degrees]C) Local data
[T.sub.2] Snail microenvironment Local data
temperature ([degrees]C)
REFERENCES AND NOTES Anderson RM, May RM. 1985. Helminth helminth /hel·minth/ (hel´minth) a parasitic worm. hel·minth n. A worm, especially a parasitic roundworm or tapeworm. Helminth A type of parasitic worm. infections of humans: mathematical models, population dynamics Population dynamics is the study of marginal and long-term changes in the numbers, individual weights and age composition of individuals in one or several populations, and biological and environmental processes influencing those changes. , and control. Adv Parasitol 24:1-101. --. 1991. Infectious Diseases infectious diseases: see communicable diseases. of Humans: Dynamics and Control. New York New York, state, United States New York, Middle Atlantic state of the United States. It is bordered by Vermont, Massachusetts, Connecticut, and the Atlantic Ocean (E), New Jersey and Pennsylvania (S), Lakes Erie and Ontario and the Canadian province of :Oxford University Press. Bakshi BR, Utojo U. 1998. Unification of neural and statistical modeling methods that combine inputs by linear projection. Comput Chem Eng 22:1859-1878. Chen MG. 1999. Progress in schistosomiasis control in China. Chin Med J 112:930-933. Chen MG, Zheng F. 1999. Schistosomiasis control in China. Parasitol Int 48:11-19. De Vlas SJ, Gryseels B, Van Oortmarssen GJ, Polderman AM, Habbema JDF JDF Job Definition Format (XML-based format for workflow and control information) JDF Jamaica Defence Force JDF Juvenile Diabetes Foundation International JDF Job Description Form JDF Japan Defense Force JDF Jackson Drop Forge Company . 1992. A model for variations in single and repeated egg counts in Schistosoma mansoni Schistosoma man·so·ni n. A trematode that is common in Africa, parts of the Middle East, the West Indies, South America, and certain Caribbean islands and causes schistosomiasis mansoni. infections. Parasitol 104:451-460. Eisenberg JNS JNS Journal of Neurosurgery JNS Jump If No Sign JNS Narssaq, Greenland (Airport Code) JNS Journal of Neoplatonic Studies JNS Justification for New Start , Seto E, Olivieri A, Spear R. 1996. Quantifying water pathogen Pathogen Any agent capable of causing disease. The term pathogen is usually restricted to living agents, which include viruses, rickettsia, bacteria, fungi, yeasts, protozoa, helminths, and certain insect larval stages. risk in an epidemiological framework. Risk Anal 16:549-563. Eisenberg JNS, Brookhart MA, Rice G, Brown M, Colford JM. 2002. Disease transmission models for public health decision making: analysis of epidemic and endemic conditions caused by waterborne pathogens Environ Health Perspect 110:783-790 (2002). Grieb TM, Hudson RJM RJM Resistojet Module RJM Religious of Jesus and Mary (France) (religious order) , Shang N, Spear RC, Gherini SA, Goldstein RA. 1999. Examination of model uncertainty and parameter interaction in a global carbon cycling model (GLOCO). Environ Int 25:787-803. Hotez PJ, Feng Z, Xu LQ, Chen MG, Xiao SH, Liu SX, et al. 1997. Emerging and reemerging helminthiases and the public health of China. Emerg Infect Dis 3:303-310. Kendall BE, Briggs CJ, Murdoch WW, Turchin P, Ellner SP, McCauley E, et al. 1999. Why do populations cycle? A synthesis of statistical and mechanistic mech·a·nis·tic adj. 1. Mechanically determined. 2. Of or relating to the philosophy of mechanism, especially one that tends to explain phenomena only by reference to physical or biological causes. modeling approaches. Ecology (Washington, DC) 80:1789-1805. Liang S, Maszle D, Spear RC. 2002. A quantitative framework for a multi-group model of Schistosomiasis japonicum schistosomiasis ja·pon·i·cum n. Infection with Schistosoma japonicum, characterized by dysenteric symptoms, painful enlargement of the liver and spleen, dropsy, urticaria, and progressive anemia. transmission dynamics and control in Sichuan, China. Acta Trop 82:263-277. MacDonald G. 1965. The dynamics of helmingth infections, with special reference to schistosomes. Trans R Soc Trop Med Hyg 59:489-506. Maszle DR. 1998. Dynamic Modeling for the Control of Schistosomiasis in China in Light of Parametric Uncertainty [PhD thesis]. Berkeley, CA: University of California The University of California has a combined student body of more than 191,000 students, over 1,340,000 living alumni, and a combined systemwide and campus endowment of just over $7.3 billion (8th largest in the United States). , Berkeley/San Francisco. Morgan MG, Henrion M, Small M. 1990. Uncertainty: A Guide to Dealing with Uncertainty in Quantitative Risk and Policy Analysis. 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Spear RC, Grieb T, Shang N. 1994. Parameter uncertainty and interaction in complex environmental models. Water Resour Res 30:3159-3169. Spear RC, Hornberger G. 1980. Eutrophication eutrophication (y trō'fĭkā`shən), aging of a lake by biological enrichment of its water. In a young lake the water is cold and clear, supporting little life. in Peel Inlet. II.
Identification of critical uncertainties via generalized sensitivity
analysis. Water Res 14:43-49.WHO. 1993. The Control of Schistosomiasis. Second Report of the WHO Expert Committee. Technical Report Series 830. Geneva Geneva, canton and city, Switzerland Geneva (jənē`və), Fr. Genève, canton (1990 pop. 373,019), 109 sq mi (282 sq km), SW Switzerland, surrounding the southwest tip of the Lake of Geneva. : World Health Organization. Woolhouse MEJ MEJ Mouvement Eucharistique des Jeunes (Organistion Catholique) MEJ Meadville, Pennsylvania (Airport Code) . 1991. On the application of mathematical models of schistosome transmission dynamics. I. Natural transmission. Acta Trop 49:241-270. Zhou Y, Maszle DR, Gong P, Spear RC, Gu XG. 1997. GIS-based spatial models of schistosomiasis infection. Geol Info Sci 2:51-57. Robert C. Spear, Alan Hubbard, Song Liang, and Edmund Seto Center for Occupational and Environmental Health, School of Public Health, University of California, Berkeley The University of California, Berkeley is a public research university located in Berkeley, California, United States. Commonly referred to as UC Berkeley, Berkeley and Cal , California, USA Address correspondence to R. Spear, Center for Occupational and Environmental Health, School of Public Health, University of California, 140 Warren Hall #7360, Berkeley, CA 94720-7360 USA. Telephone: (510) 642-0761. Fax: (510) 642-5815. E-mail: spear@uclink4.berkeley.edu We acknowledge our long-standing collaboration with the Schistosomiasis Department, Sichuan Institute of Parasitic Disease, Chengdu, under the leadership of D. Qiu and X. Gu, as well as with the Schistosomiasis Control Unit of Xichang County. Financial support for this work was provided in part by the Endemic Disease Endemic disease An infectious disease that occurs frequently in a specific geographical locale. The disease often occurs in cycles. Influenza is an example of an endemic disease. Office of the Provincial Government of Sichuan and the National Institute of Allergy and Infectious Disease, 1RO1-AI43962. Received 26 October 2001; accepted 5 March 2002. |
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