Demersal groundfish densities in trawlable and untrawlable habitats off Washington: implications for the estimation of habitat bias in trawl surveys.Abstract--Demersal groundfish densities were estimated by conducting a visual strip-transect survey via manned submersible submersible, small, mobile undersea research vessel capable of functioning in the ocean depths. Development of a great variety of submersibles during the later 1950s and 1960s came about as a result of improved technology and in response to a demonstrated need for on the continental shelf off Cape Flattery Noun 1. Cape Flattery - a cape of northwestern Washington Evergreen State, WA, Washington - a state in northwestern United States on the Pacific , Washington. The purpose of this study was to evaluate the statistical sampling power of the submersible survey as a tool to discriminate density differences between trawlable and untrawlable habitats. A geophysical ge·o·phys·ics n. (used with a sing. verb) The physics of the earth and its environment, including the physics of fields such as meteorology, oceanography, and seismology. map of the study area was prepared with side-scan sonar imagery, multibeam bathymetry ba·thym·e·try n. The measurement of the depth of bodies of water. bath y·met data, and known locations of
historical NMFS NMFS National Marine Fisheries ServiceNMFS National Mortality Followback Survey NMFS Network Multimedia File System NMFS Nested Mount File System trawl trawl - To sift through large volumes of data (e.g. Usenet postings, FTP archives, or the Jargon File) looking for something of interest. survey events. Submersible transects were completed at randomly selected dive sites located in each habitat type. Significant differences in density between habitats were observed for lingcod lingcod Commercially popular fish species (Ophiodon elongatus) that is strictly marine, found along the Pacific coast of North America. It is a voracious predator with a large mouth and caninelike teeth. (Ophiodon elongatus), yelloweye rockfish rockfish, member of the large family Scorpaenidae (rockfishes and scorpionfishes), carnivorous fish inhabiting all seas and especially abundant in the temperate waters of the Pacific. Rockfishes are found among rocks and reefs. (Sebastes ruberrimus), and tiger rockfish (S. nigrocinctus) individually, and for "all rockfish" and "all flatfish" in the aggregate. Flatfish were more than ten times as abundant in the trawlable habitat samples than in the untrawlable samples, whereas rockfish as a group were over three times as abundant in the untrawlable habitat samples. Guidelines guidelines, n.pl a set of standards, criteria, or specifications to be used or followed in the performance of certain tasks. for sample sizes and implications for the estimation of the continental shelf trawl-survey habitat-bias are considered. We demonstrate an approach that can be used to establish sample size guidelines for future work by illustrating the interplay in·ter·play n. Reciprocal action and reaction; interaction. intr.v. in·ter·played, in·ter·play·ing, in·ter·plays To act or react on each other; interact. between statistical sampling power and 1) habitat specific-density differences, 2) variance of density differences, and 3) the proportion of untrawlable area in a habitat. ********** Despite their utility, trawl surveys cannot obtain quantitative samples from rough, rocky habitats, and thus have a limited ability to sample all habitats representatively (Uzmann et al., 1977; Kulbicki and Wantiez, 1990; Krieger, 1993; Gregory et al., 1997). Since 1977, triennial tri·en·ni·al adj. 1. Occurring every third year. 2. Lasting three years. n. 1. A third anniversary. 2. A ceremony or celebration occurring every three years. bottom trawl surveys have been used to estimate the abundance of commercially and recreationally exploited groundfish species in the continental shelf waters off Washington, Oregon, and California (Shaw et al., 2000). The data generated from these NMFS surveys are often a key component of groundfish stock assessments which are used to set levels of acceptable biological catch (ABC) for selected species (PFMC PFMC Pacific Fishery Management Council PFMC Pacific Foundation for Medical Care PFMC Pilgrims of Faith Marian Center , 2001). Clearly, proper interpretation of these survey data with respect to fish habitat preferences is an important part of developing unbiased stock assessments for fisheries management. In trawl survey methodology, population biomass is related to CPUE CPUE Catch Per Unit Effort (fishing industry) by the following equation (Dark and Wilkins, 1994): [B.sub.i] = [A.sub.i]/[a.sub.i]([[bar]CPUE.sub.i] x 1/q), where i = area-depth stratum stratum /stra·tum/ (strat´um) (stra´tum) pl. stra´ta [L.] a layer or lamina. stratum basa´le ; [B.sub.i] = estimated biomass in the ith area-depth stratum; [A.sub.i] = total area in the ith stratum; [a.sub.i] = total area swept during a standard trawl haul in stratum i; [[bar]CPUE.sub.i] = mean catch per unit of effort in the ith stratum; and q = the catchability coefficient of the sampling trawl. For this model to be an unbiased estimator of abundance, it is necessary to assume that the area sampled by the trawl is representative of the entire area-depth stratum of interest (i.e. [a.sub.i] is representative of [A.sub.i]. Validating this assumption becomes particularly important where untrawlable habitat comprises a significant proportion of the total area assessed, and where species composition and density vary between habitats. We shall refer to error in trawl survey estimates of abundance due to differences in groundfish density between habitat types as the trawl-survey habitat-bias. The trawl-survey habitat-bias may be substantial on the west coast continental shelf because of the considerable spatial extent of untrawlable habitat in some management regions (Shaw et al., 2000). It is also widely recognized that demersal de·mer·sal adj. 1. Dwelling at or near the bottom of a body of water: a demersal fish. 2. groundfish species composition and density can vary considerably by bottom type (Richards, 1986; Matthews and Richards, 1991; Stein et a1.,1992; O'Connell and Carlile, 1993; Gregory et al., 1997; Krieger and Ito, 1999; Nasby, 2000; Yoklavich et al., 2000). Thus, there is considerable interest in evaluating alternative survey tools. One alternative to trawl surveys that has gained increased attention in recent years is the method of direct observation of the seafloor, typically conducted with a remotely operated vehicle (ROV ROV Remotely Operated Vehicle ROV Real Options Valuation ROV Return on Value ROV Range of View ROV Rostov, Russia - Rostov (Airport Code) ROV Roll-Over Valve (automotive fuel tanks) ROV Range of Value ) or with an occupied submersible (Auster et al., 1989; Krieger, 1993; Caimi et al., 1993; Adams et al., 1995; Gregory et al., 1997; Nasby, 2000). We evaluated the sampling power of the benthic ben·thos n. 1. The collection of organisms living on or in sea or lake bottoms. 2. The bottom of a sea or lake. [Greek. video-strip transect method, using videotapes of the sea floor collected in situ In place. When something is "in situ," it is in its original location. with an occupied submersible. Our goal was to judge the feasibility of using this approach to provide meaningful comparisons of demersal groundfish densities between trawlable and untrawlable habitats on spatial scales large enough to be useful for west coast fisheries management. We prepared a geophysical map of the bottom and conducted a submersible survey at a study site located on the continental shelf off Cape Flattery, Washington. Our objective was to provide guidelines on sample sizes (number of submersible transects) that would be needed to characterize differences in density between the two habitat types, and specifically, sample sizes that would be needed to estimate the trawl survey habitat bias in subsequent studies designed to cover wider geographic areas. The study was structured to answer the following questions: 1) what species occupy trawlable and untrawlable habitats off Washington; 2) what magnitude of density differences can be expected between trawlable and untrawlable habitats; 3) what is the variability offish off·ish adj. Inclined to be distant and reserved; aloof. off ish·ly adv.off density within each habitat type; and 4) what sample sizes are required to estimate density differences between habitats, and the trawl survey habitat bias, in a statistically reliable manner. Our focus was on the benthic species and species groups that could be assessed reliably with our submersible survey method; primarily rockfish (Sebastes spp.), lingcod (Ophiodon elongatus), and flatfish (Pleuronectiformes). Materials and methods Study site Selection of the study site was aided by examination of historical NMFS trawl survey records and Washington Department of Fish and Wildlife (WDFW WDFW Washington Department of Fish and Wildlife ) trawl fishery logbook data. We chose a rectangular area west of the Point of Arches, Washington, which extends from the Juan de Fuca Juan de Fu·ca , Strait of A strait between northwest Washington State and Vancouver Island, British Columbia, Canada, linking Puget Sound and the Strait of Georgia with the Pacific Ocean. Canyon in the east (125[degrees]17'W) to Nitinat Canyon in the west (125[degrees]37'W) and ranges from 48[degrees]13' in the south to 48[degrees]16' in the north (Fig. 1). We selected this area because 1) this portion of the Washington coast has been the site of a productive groundfish fishery since the 1940s (Alverson 1951), 2) this location has been surveyed tri-annually since 1977 as part of the NMFS west coast shelf survey, 3) the area has demersal groundfish species of interest, and 4) the area contains both trawlable and untrawlable habitats. The seafloor of this area was sculpted sculpt v. sculpt·ed, sculpt·ing, sculpts v.tr. 1. To sculpture (an object). 2. To shape, mold, or fashion especially with artistry or precision: and shaped by ice movements during the late Pleistocene The Late Pleistocene (also known as Upper Pleistocene or the Tarantian) is a stage of the Pleistocene Epoch. The beginning of the stage is defined by the base of Eemian interglacial phase before final glacial episode of Pleistocene 126,000 ± 5,000 years ago. period (approximately 18-20 thousand years ago) and is characterized by boulder fields resulting from glacial gla·cial adj. 1. a. Of, relating to, or derived from a glacier. b. Suggesting the extreme slowness of a glacier: Work proceeded at a glacial pace. 2. a. deposition that cover substantial portions of the area (Goldfinger (1)). Planning for the submersible survey required geodetically ge·o·det·ic also ge·o·det·i·cal adj. Geodesic. ge o·det precise knowledge of the seafloor characteristics of the
study area. This was facilitated by conducting geophysical surveys and
by preparing a detailed map, which was instrumental to the submersible
survey design.
[FIGURE 1 OMITTED] Geophysical surveys and map preparation Geophysical surveys of the study site were conducted by collecting side-scan sonar and multibeam bathymetry data simultaneously during a five-day effort on board the USN Agate Passage (YP-697) in May 1998. Slant-range-corrected side scan sonar data were collected by using a Waverly widescan 100-kHz system, with a swath width of 800 m. Eighteen parallel track lines were conducted with 100% overlap. The resulting imagery was assembled into a mosaic map of the bottom relief for a rectangular area measuring approximately 5.6 by 24.8 km (13,888 hectares). Bathymetric ba·thym·e·try n. The measurement of the depth of bodies of water. bath y·met data, with resolution on the order of [+ or -]0.4
m were collected with a Reson Model 8101 multibeam bathymetry system.
The multibeam bathymetry data were processed to produce a detailed map
of the bottom topography topography (təpŏg`rəfē), description or representation of the features and configuration of land surfaces. Topographic maps use symbols and coloring, with particular attention given to the shape and elevations of terrain. with 1-m depth contour A line connecting points of equal depth below the hydrographic datum. Also called bathymetric contour or depth curve. intervals.
Map overlays were prepared that showed the locations of trawl survey events and trawl fishery tows. Detailed NMFS records were used to identify the location of various events associated with historical surveys of the area. The NMFS survey event types included good hauls, bad hauls, short hauls (tows ended early because of rough bottom), skipped hauls, chain drags, and chain snags SNAGS, n.pl See sustained natural apophyseal glides. . Interviews with knowledgeable fishermen were also conducted to establish the locations of known trawling For fishing by dragging a baited line after a boat, see . Trawling is a method of fishing that involves actively pulling a fishing net through the water behind one or more boats, called trawlers. sites within the area. The resulting geophysical map, with overlays, provided a geographically accurate reference of the study area that allowed a priori a priori In epistemology, knowledge that is independent of all particular experiences, as opposed to a posteriori (or empirical) knowledge, which derives from experience. classification of the bottom into trawlable and untrawlable habitat types (Fig. 2). The final map consisted of the following layers: 1) a mosaic of sidescan imagery of the bottom (Fig. 2, top); high-resolution depth contours Contours may mean:
[FIGURE 2 OMITTED] Experimental design Our survey design process made use of the detailed map of the study area for 1) definition of the sampling unit, 2) classification of all sampling units as trawlable or untrawlable habitats, and 3) specification of the in situ survey area. A sample of units to be surveyed by submersible was selected from each habitat type by using computer-generated pseudo-random numbers. In defining the size of the sampling unit, we sought to strike a balance between a spatial scale that was small enough to have homogeneity Homogeneity The degree to which items are similar. but large enough to have meaning as a trawlable or untrawlable space. We chose square sample units of 800 by 800 m in size. This size was smaller than the standard NMFS tow length of about 3,000 m and was well within the order of resolution of the multibeam bathymetry and side-scan imagery used for discerning dis·cern·ing adj. Exhibiting keen insight and good judgment; perceptive. dis·cern ing·ly adv. rock outcrops. A grid
consisting of the 800 by 800 m sampling units was prepared and overlaid o·ver·laid v. Past tense and past participle of overlay1. onto the map of the study area (Fig. 2). Classification of the sampling units into "trawlable" and "untrawlable" habitats was facilitated by examination of the geophysical map of habitat features, together with an evaluation of historical NMFS trawl survey records. The survey map layer helped us to interpret the appearance of trawlable and untrawlable habitat on the bathymetric and side-scan geophysical map layers. Trawlable bottom was inferred from locations with good hauls and uneventful chain drags; untrawlable bottom was inferred from bad hauls, short hauls, skipped hauls, and chain snags. On the side-scan mosaic layer, untrawlable locations were typically darker than surrounding areas, indicating boulder fields or hard, rocky bottom. Such areas often showed high bottom relief, as evidenced by shadows on the mosaic, and bathymetric contours that indicated abrupt topographic topographic describing or pertaining to special regions. features, such as sharp ridges or pinnacles. A sample unit was classified as untrawlable habitat when 1) NMFS survey events within the unit indicated rough bottom, or 2) the mosaic or bathymetric layers of the unit resembled other units that were classified as untrawlable, or 3) a sample unit of unknown habitat type was completely surrounded by untrawlable habitat. A sample unit was classified as trawlable habitat when 1) NMFS survey events indicated successful trawl tows in the unit or 2) when the mosaic or bathymetric layers of the unit resembled other units that were classified as trawlable. Our trawlable and untrawlable habitat assignments agreed well with information obtained from knowledgeable fishermen. Each sampling unit in the entire mapped area was examined visually in detail according to according to prep. 1. As stated or indicated by; on the authority of: according to historians. 2. In keeping with: according to instructions. 3. the above procedure and was classified accordingly as trawlable or untrawlable habitat. We selected the eastern portion of the mapped area for the submersible survey (Figs. 2 and 3). Our focus was restricted to this section to minimize the difference in bottom depths between the trawlable and untrawlable areas as a factor, and for logistical lo·gis·tic also lo·gis·ti·cal adj. 1. Of or relating to symbolic logic. 2. Of or relating to logistics. [Medieval Latin logisticus, of calculation convenience to complete the most submersible dives possible within our survey budget. Because the 800 m by 800 m sampling units were too large to be surveyed in their entirety, we sampled using the strip transect method at each location. Logistically, this was accomplished by conducting 2-3 nonoverlapping passes across the sampling unit and by pooling these segments together to form a single transect for analysis. [FIGURE 3 OMITTED] Submersible survey We used the submersible Delta to conduct the fish survey with the support vessel FV Auriga in July of 1998. The Delta is 4.7 m long, accommodates one observer and one pilot, and has a maximum operating depth The keel depth that a submarine is not to exceed during operations. This depth is determined by the submarine's national naval authority. See also test depth. of 365 m. An acoustic Trak-Point system was used with differential GPS See GPS augmentation system. and WinFrog navigational software (Thales GeoSolutions (Pacific), San Diego San Diego (săn dēā`gō), city (1990 pop. 1,110,549), seat of San Diego co., S Calif., on San Diego Bay; inc. 1850. San Diego includes the unincorporated communities of La Jolla and Spring Valley. Coronado is across the bay. , CA) to track and log the position of the submersible from the support vessel. The Delta was equipped with halogen halogen (hăl`əjĕn) [Gr.,=salt-bearing], any of the chemically active elements found in Group 17 of the periodic table; the name applies especially to fluorine (symbol F), chlorine (Cl), bromine (Br), and iodine (I). lights, external video cameras, an external Photosea 35-mm camera with strobe strobe n. 1. A strobe light. 2. A stroboscope. 3. A spot of higher than normal intensity in the sweep of an indicator, as on a radar screen, used as a reference mark for determining distance. , and a Pisces Box data-logging system that recorded 1) the time of day, 2) depth of the submersible, 3) its distance from the bottom, and 4) sea temperature at 5-second intervals. Strip transects were conducted 1-2 m off bottom at a cruising speed of approximately 2.5 km/h. All dives were made during daylight hours. To quantify fish density, each strip transect was documented with a high 8-mm video camera mounted externally on the bow (Naut.) on that part of the horizon within 45° on either side of the line ahead. - Totten. See also: Bow of the Delta, and pointed forward. The camera was equipped with two parallel lasers, spaced 20 cm apart, which were used for estimating the area that was swept. The scientific observer on board the Delta verbally annotated the videotape videotape Magnetic tape used to record visual images and sound, or the recording itself. There are two types of videotape recorders, the transverse (or quad) and the helical. record with observations taken through the submersible viewing ports, to help identify fish and interpret the videotapes during subsequent analysis. The high 8-ram tapes were copied to S-VHS format to facilitate videotape analysis. The transect area that was swept ([m.sup.2]) was estimated as the product of average area swept per second ([m.sup.2]/min) and the total transect duration in minutes (see Appendix I for details). The average area that was swept per second ([m.sup.2]/min) was determined from a set of 30-second samples randomly selected from the transect. On average, approximately 29% of each transect was subsampled in this manner. Bottom habitat type was also visually characterized for the transect subsamples. Following the method of Stein et al, (1992) and using the classification criteria developed by Greene et al. (1999), we categorized cat·e·go·rize tr.v. cat·e·go·rized, cat·e·go·riz·ing, cat·e·go·riz·es To put into a category or categories; classify. cat bottom microhabitat microhabitat the normal environment, the natural home, of a microorganism. type (mud, pebble, cobble, boulders, and rock ridge For the record label, see . For the California Neighborhood, see . For the fictional town, see . The Rock Ridge Interchange Protocol (RRIP, IEEE P1282) is an extension to the ISO 9660 volume format which adds POSIX file system semantics. ) as primary (at least 50% of the area viewed) or as secondary (>20% of the area viewed). The bottom-type measurements observed directly in the transect subsamples were expanded to estimate microhabitat coverage for each transect. Fish were enumerated This term is often used in law as equivalent to mentioned specifically, designated, or expressly named or granted; as in speaking of enumerated governmental powers, items of property, or articles in a tariff schedule. by identifying and counting only those fish observed in the lower portion of the video monitor screen (counting area), below the imaginary line In general, an imaginary line is any sort of line that has only an abstract definition, and does not exist in fact. As a geographical concept, an imaginary line may serve as an arbitrary division (such as a border). connecting the laser spots. Lighting and visibility was greatest in this zone, and we assumed that the probability of observing and counting fish in this portion of the video image was 100% (i.e. q=1). A fish was counted if any portion of the fish was visible in the counting area. The distance observed between the two laser spots was used as a reference to classify fish into two size categories: large (>20 cm) and small (<20 cm). Fish were identified to the lowest taxonomic tax·o·nom·ic also tax·o·nom·i·cal adj. Of or relating to taxonomy: a taxonomic designation. tax level possible. We recognized that fish detection and identification were subject to observer error. The variability describing that error was obtained by conducting a repeat counting of a sample of transects by the same observer. Additional validation checks were made between multiple observers. Analytical methods Fish density estimates (number/[10.sup.3] [m.sup.2]) were computed by dividing the total number of fish counted by the total estimated area-swept at each sample-unit site. Statistical comparisons of fish density estimates between the trawlable and untrawlable habitat types were limited to the level of classification (e.g. species or species group) where identifications were considered to be reliable. Estimates of the sample variance of fish density for the trawlable and untrawlable habitats ([s.sub.t.sup.2] and [s.sub.u.sup.2], respectively) were estimated as the sample variance of the fish density estimates among sites within each habitat type. We used a power analysis for detecting differences in fish density between habitat types to generate sample size requirements to describe the sampling power of the submersible survey. The greater the sampling power, the fewer samples needed. Statistical power (i.e. the probability of correctly rejecting a false null hypothesis null hypothesis, n theoretical assumption that a given therapy will have results not statistically different from another treatment. null hypothesis, n ) is inversely related to the significance criterion (a) and is positively correlated cor·re·late v. cor·re·lat·ed, cor·re·lat·ing, cor·re·lates v.tr. 1. To put or bring into causal, complementary, parallel, or reciprocal relation. 2. with sample size and effect size (Peterman Pe´ter`man n. 1. A fisherman; - so called after the apostle Peter. , 1990). The significance criterion is the rate of rejecting a true null hypothesis (the probability of type-I error) and was fixed at 0.05 for our analysis. Effect size can be thought of as the degree to which a phenomenon exists (Cohen cohen or kohen (Hebrew: “priest”) Jewish priest descended from Zadok (a descendant of Aaron), priest at the First Temple of Jerusalem. The biblical priesthood was hereditary and male. , 1988). In our study, the effect size was the hypothesized true difference in fish densities between trawlable and untrawlable habitats. Given a significance level and effect size, power is a function of sample size. Because the effect size is the quantity being tested, it is unknown. Therefore a power analysis is a theoretical "what if" exercise, which asks the question: "If the effect is this big, would the test be likely to detect it with this sample size?" Although the choice of effect size values used for a power analysis are arbitrary, they should be set at some meaningful threshold level Noun 1. threshold level - the intensity level that is just barely perceptible intensity, intensity level, strength - the amount of energy transmitted (as by acoustic or electromagnetic radiation); "he adjusted the intensity of the sound"; "they measured the , such that if the true effect is less than this threshold, it would not be important to detect it. In our power analysis we used the approximation approximation /ap·prox·i·ma·tion/ (ah-prok?si-ma´shun) 1. the act or process of bringing into proximity or apposition. 2. a numerical value of limited accuracy. (1) [Z.sub.1-b] = d(n-1)[square root of ]2n / 2(n-1) + 1.21([Z.sub.1-a] - 1.06) - [Z.sub.1-a] (Dixon and Massey, 1957; Cohen, 1988), where [Z.sub.1-b] = the percentile of the unit normal which gives power; [Z.sub.1-a] = the percentile of the unit normal for the significance criterion; for a two-tailed test two-tailed test a test in which both 'large' and 'small' values of the test statistic indicate that the null hypothesis is not correct. , a = [a.sub.(2)]/2; d = the standardized effect size index for the two-tailed t-test calculated as (2) d = [m.sub.t] - [m.sub.u] / [s.sub.p], where [m.sub.t] and [m.sub.u] = the true densities in trawlable and untrawlable habitat, respectively; and [s.sub.p.sup.2] the true pooled variance In statistics, many times, data are collected for a dependent variable, y, over a range of values for the independent variable, x. For example, the observation of fuel consumption might be studied as a function of engine speed while the engine load is held constant. of the submersible survey density estimator. By design, our study drew independent samples of equal size from each of the two habitat types, and [s.sup.2.sub.p] = ([s.sup.2.sub.t] + [s.sup.2.sub.u]). The power approximation procedure was convenient to use, in lieu of Instead of; in place of; in substitution of. It does not mean in addition to. an exact method, because it was dependent only on the effect size-index (d) and sample size. Note from Equation 2 that d is unitless, so that statistical power and sample size could easily be compared across a range of species groups, where the absolute density differences between trawlable and untrawlable habitats can vary considerably (Cohen, 1988). For the analysis, we derived a standardized effect size-index for the density comparison ([d.sub.b]). The derivation derivation, in grammar: see inflection. was based on the relationship between density, abundance, and an effect size-threshold selected for abundance (Appendix II). The effect size-threshold for the abundance estimator was arbitrarily chosen to be equal to its standard error under the assumption that a lesser effect size would be difficult to detect. Under this assumption, the standardized effect size index is given by (3) [d.sub.b] = [A/[A.sub.2] SD([D.sub.t)/[s.sub.p], where [A.sub.u] = the area of untrawlable habitat; A = the total area; SD([D.sub.t]) = the standard deviation of the trawl survey abundance estimator; and [S.sub.p] = the pooled standard deviation Pooled standard deviation is a way to find a better estimate of the true standard deviation given several different samples taken in different circumstances where the mean may vary between samples but the true standard deviation (precision) is assumed to remain the same. of the submersible survey density estimates. The standardized effect size index ([d.sub.b]) depends on 1) the proportion of untrawlable habitat in the total area ([A.sub.u]/A), and 2) the variability in the trawl survey density estimator in relation to the varif ability in the submersible survey density estimator (SD([D.sub.t])/sp) (Eq. 3). One can see that as [A.sub.u]/A increases,[d.sub.b] decreases; conversely con·verse 1 intr.v. con·versed, con·vers·ing, con·vers·es 1. To engage in a spoken exchange of thoughts, ideas, or feelings; talk. See Synonyms at speak. 2. , as SD([D.sub.t])/[s.sub.p] increases, [d.sub.b] increases. The relationship between the standard deviations (SD ([D.sub.t])/[s.sub.p]) and [d.sub.b] creates an apparent paradox. Greater uncertainty in the trawl survey estimator (SD([D.sub.t])) in relation to the submersible survey estimator ([s.sub.p]) causes [d.sub.b] to increase, and thus the power of the submersible survey. Because greater power results in lesser sample size requirements, it appears that species with higher trawl survey uncertainty require fewer submersible survey samples. The reason fewer samples are required is that the effect size-index threshold has been increased and, generally, fewer samples are needed to detect larger effects. The key to understanding this relationship is that effect size is related to SD([D.sub.t]), but power is a function of that effect size in relation to the uncertainty in the data ([s.sub.p]). Essentially, the greater the effect size in relation to the uncertainty in the data, the greater the power. As SD([D.sub.t])/[s.sub.p] increases, the level of resolution that can be detected by the trawl survey decreases. Thus, our choice to set the effect size-threshold (the level of bias we need to be able to detect) equal to the uncertainty of the trawl survey estimator (Appendix II) created a tradeoff between the level of resolution of the hypothesis test and the power to detect that level. This criterion was an arbitrary choice; a different relationship to describe this tradeoffwould yield different results. In practice, the relative level of acceptable bias versus precision will depend on particular management objectives. To obtain sample size guidelines for estimating the trawl survey habitat bias, we calculated [d.sub.b] using estimated values for SD([D.sub.t]), [s.sub.p,] and a range of assumed values for [A.sub.u]/A for selected groundfish groups. We used information from our submersible survey to characterize the variability of density estimates within trawlable and untrawlable habitats ([s.sub.p]), and information from past trawl surveys to characterize the variability in trawl survey estimates of abundance (SD([D.sub.t])). The trawl survey statistics used were derived from the 1998 survey estimates available for the US-Vancouver International North Pacific Fisheries Commission (INPFC INPFC International North Pacific Fisheries Commission ) area shallow stratum (55-183 m) (Shaw et al., 2000), which encompasses the study area location. By substituting the calculated [d.sub.b] for d in Equation 1, we solved iteratively for sample size (n) using Excel Solver (Excel 2000 vers vers abbr. versed sine . 9.0.2720, Microsoft Corp., Redmond, WA). The sample sizes obtained provide guidelines so that a similarly designed study will have an x% chance (e.g. power of 0.80=80% chance) of detecting a difference in mean density at least as large as the random noise inherent in the trawl survey density estimator. Results Submersible survey Sixteen dive sites were sampled--eight in each habitat type (trawlable and untrawlable) (Table 1). In total, an estimated 85,900 [m.sup.2] was covered across all sites. The untrawlable sites (90-118 m) tended to be somewhat shallower than the trawlable sites (106-148 m); however, we assumed that this difference had little effect on fish density and species composition within the study area. In general, we were not successful in obtaining useful transect plots or reliable distance-traveled information with the WinFrog navigational software package; however, we found the Trak-Point acoustic tracking system to be useful for obtaining the location of the submersible with respect to the ship's position. We used this information, together with the subsea Subsea is a general term frequently used to refer to equipment, technology, and methods employed to explore, drill, and develop oil and gas fields that exist below the ocean floors. This may be in "shallow" or "deepwater". communication system, to guide the submersible along the predesignated transect segments at each dive site. Our video survey largely confirmed our a priori assignments of trawlable and untrawlable habitat (Table 2). At the dive sites designated trawlable prior to the video transect survey, mud bottom predominated (78.5%), followed by pebble (11.5%), mudpebble (3.7%), and pebble-cobble (3.3%). At the sites designated a priori to be untrawlable, pebble bottom was most common (62.0%) followed by pebble-boulder (14.6%), mud (7.8%), boulder-pebble (6.3%), and boulder-cobble (6.0%). Microhabitat classifications unique to untrawlable habitat comprised 14.5% of the total and included cobble-pebble, cobble, boulderpebble, boulder-cobble, rock-ridge, boulder, and cobble-boulder. The mud-pebble microhabitat was observed at trawlable sites but not at untrawlable sites. Bottom perturbations, which we presumed were trawl-door tracks, were observed at 6 of 8 a priori trawlable locations (sites 4, 5, 10, 12, 13, and 15), and at 2 of 8 a priori untrawlable locations (sites 3 and 14). We counted 3647 fishes representing 26 species or generic group classifications (Table 3). Some fishes were readily identifiable to species; for example, lingcod, ratfish (Hydrolagus colliei), canary rockfish The canary rockfish (Sebastes pinniger) is a rockfish of the Pacific coast, found from south of Shelikof Strait in the eastern Gulf of Alaska to Punta Colnett in northern Baja California. (Sebastes pinniger), and wolf-eel (Anarrhichthys ocellatus) were very distinctive. Other fishes could not always be identified to species level. In such cases, fish were assigned to the generic groups of "unidentified" rockfish, flatfish, or roundfish. It is likely that greenstriped (S. elongatus), redstripe (S. proriger), rosethorn (S. helvomaculatus), silvergray (S. brevispinis), and yellowtail rockfish (S. flavidus) were sometimes classed as unidentified rockfish; more rarely, large quillback quill·back n. pl. quillback or quill·backs A North American freshwater fish (Carpiodes cyprinus) that has one ray of the dorsal fin extending conspicuously beyond the others. (S. maliger), tiger (S. nigrocinctus), and yelloweye rockfish (S. ruberrimus) may have been assigned to this category. Flatfish were very difficult to identify to species; it is very likely that arrowtooth (Atheresthes stomias), Dover sole Dover sole refers to two species of flatfish:
Dover sole, Microstomus pacificus ) and Pacific halibut Noun 1. Pacific halibut - a righteye flounder found in the Pacific Hippoglossus stenolepsis righteye flounder, righteyed flounder - flounders with both eyes on the right side of the head (Hippoglossus stenolepis) were sometimes classed as unidentified flatfish. The reliability of our fish counts was in part a function of fish size. A summary of counts for large (>20 cm) and small (<20 cm) fish is shown in Table 4. Small flatfish and rockfish were very difficult to count, often becoming indistinguishable from the background when the videotape was paused, and their counts are most likely underestimated. Among the large fish, "total rockfish" as a group was the most abundant numerically followed by "total flatfish" as a group. Of the large rockfish identified to species (Table 5), rosethorn rockfish were the most abundant followed in order by yellowtail, greenstriped, yelloweye, tiger, and redstripe rockfish. Unidentified rockfish represented 30% of the total large rockfish enumerated. Of the large flatfish identified to species (Table 6), Dover sole were most abundant followed in order by arrowtooth flounder The arrowtooth flounder, Atheresthes stomias, is a species of righteye flounder. It can be caught from the Bering Sea to Santa Rosa Island, California. Spawning occurs from December through February. This species of flounder can live up to 25 years. and Pacific halibut. Unidentified flatfish represented 78% of the total large flatfish counted. Other individual fish species and groups identified below the generic classification level were dominated by eelpout (Zoarcidae), ratfish, skates Skates may refer to:
Species composition differed considerably between habitats. The number of individually identified species was 15 in the trawlable habitat, and 18 in the untrawlable habitat (Table 8). Flatfish dominated in the trawlable habitat, and rockfish in the untrawlable habitat. Yelloweye, redstripe, silvergray, and quillback rockfish, as well as greenling and wolf-eel were observed in the untrawlable habitat but not in the trawlable habitat. Spiny spiny sharp spines protrude. spiny amaranth amaranthusspinosum. spiny anteater see echidna. spiny clotburr xanthiumspinosum. spiny emex see emex australis. dogfish dogfish, name for a number of small sharks of several different families. Best known are the spiny dogfishes (family Squalidae) and the smooth dogfishes (family Triakidae). Spiny dogfishes have two spines, one in front of each dorsal fin, and lack an anal fin. (Squalus acanthias), Pacific cod (Gadus macrocephalus), and salmon (Oncorhynchus spp) were observed in the trawlable habitat but not in the untrawlable habitat. Comparisons of fish densities and variances between habitat types were made only for fish >20 cm in length and in taxonomic units where reliable identification and enumeration 1. (mathematics) enumeration - A bijection with the natural numbers; a counted set. Compare well-ordered. 2. (programming) enumeration - enumerated type. could be assured (Table 9). Thus, density comparisons were performed at the species level for distinctive species (i.e. lingcod, yelloweye rockfish, and tiger rockfish), but were made at the group level for "all rockfish" and "all flatfish" bwcause of the presence of fish that could not be identified to individual species within each of these groups. For all comparisions, tests of homogeneity of variance of fish density between habitats ([H.sub.0]: [s.sup.2.sub.t] = [s.sup.2.sub.u]) were rejected using Cochran's test (Wirier, 1971) (a=0.05, k=2, df=7), indicating heteroscedastisity (Table 9). Significant differences in densities between habitats were found for each of the species and group comparisons using the Mann-Whitney two-sample test on ranks (Winer, 1971) (a=0.05, 2) (Table 9). Densities were higher in the untrawlable habitat for the "all rockfish" group, tiger rockfish, yelloweye rockfish, and lingcod; densities were higher in the trawlable habitat for the "all flatfish" group. Statistical power analysis The validity of our approach for analyzing the statistical sampling power of the submersible survey depends upon, among other things, fidelity to the assumptions of the two-sample t-test of means. The t-test requires that 1) the two sample means are estimated from random samples drawn from normally distributed populations, and that 2) the variance of the two populations are equal. Because our estimates of variance differed considerably between habitats (Table 9), we examined the properties of our data in more detail to confirm the reliability of using the t-test for our statistical power analysis. We conducted a bootstrap See boot. (operating system, compiler) bootstrap - To load and initialise the operating system on a computer. Normally abbreviated to "boot". From the curious expression "to pull oneself up by one's bootstraps", one of the legendary feats of Baron von Munchhausen. simulation experiment, in which we compared estimates of empirical power derived from our study (n=8) with the estimates of power obtained with Equation 1, under the assumption of asymptotic normality normality, in chemistry: see concentration. . The results of this comparison indicated that estimates of statistical power obtained from Equation 1 were generally conservative (indicated lower power) in relation to the empirical estimates of power for simulated known differences in density (Fig. 4). Given this result, we proceeded with our power analysis based on the t-test, under the assumption that, based on our observations, this approach will tend to err in the conservative direction; that is, it will tend to understate un·der·state v. un·der·stat·ed, un·der·stat·ing, un·der·states v.tr. 1. To state with less completeness or truth than seems warranted by the facts. 2. statistical power. [FIGURE 4 OMITTED] It is evident that, as it becomes necessary to detect smaller effect sizes, the required sample size increases accordingly. The relationship between sample size (n=the number of sample units [submersible dive sites] in each habitat type) and the effect size-index (d) for density comparisons between trawlable and untrawlable habitats is shown in Figure 5. To achieve power of 80% (a=0.05), the required number of dives ranges from n = 5 (d=2.0) to n = 17 (d=l.0); similarly, to obtain 90% power would require 8 to 27 dives. Empirical estimates of d from our study ranged from 1.1 for tiger rockfish to 2.0 for flatfish. This result suggests that it is relatively more difficult (i.e. more dive sites are required) to detect density differences between habitats for tiger rockfish, as compared to flatfish. The associated power curves for these two values of d are illustrated in Figure 6. Figure 6 suggests that, given our observations (for values of (jargon) for values of - A common rhetorical maneuver at MIT is to use any of the canonical random numbers as placeholders for variables. "The max function takes 42 arguments, for arbitrary values of 42". "There are 69 ways to leave your lover, for 69 = 50". d as low as 1.1), a sample size guideline guideline Medtalk A series of recommendations by a body of experts in a particular discipline. See Cancer screening guidelines, Cardiac profile guidelines, Gatekeeper guidelines, Harvard guidelines, Transfusion guidelines. of approximately 15 submersible dive sites in each habitat type would yield approximately an 80% chance of detecting a difference in mean density at least as large as the random noise estimated in the data for a similarly designed study. [FIGURE 5-6 OMITTED] Our statistical power analysis also indicated that, when the relative proportions of untrawlable and trawlable habitat, as well as the variability in the trawl survey estimates of abundance, are taken into consideration, the problem of estimating the trawl survey habitat bias can require substantially more samples than would be required simply to compare the density differences between two habitat types. Values of the trawl-survey habitat-bias effect size-index ([d.sub.b]), calculated for a range of untrawlable habitat proportions with empirical trawl and submersible survey data, are given in Table 10 and are plotted for rockfish and flatfish in Figure 7. Using the calculated values of [d.sub.b] from Table 10, we derived sample size guidelines for rockfish and flatfish (at power=0.80, a=0.05). The resulting relationship between the sample size required to estimate the trawl survey habitat bias (the n=number of submersible dive sites in each habitat type) and the proportion of untrawlable habitat in a management area ([A.sub.u]/A) is illustrated in Figure 8. If, for example, the area of untrawlable habitat represented 20% of a management unit, Figure 8 indicates that the sample size required to estimate the trawl survey habitat bias would be n = 31 for rockfish ([d.sub.b]=0.73), and n = 9 for flatfish ([d.sub.b]=l.41). Sample sizes for lingcod were much higher (n>100), owing to owing to prep. Because of; on account of: I couldn't attend, owing to illness. owing to prep → debido a, por causa de the comparatively small detectible effect size required ([d.sub.b]=O. 13). [FIGURE 7-8 OMITTED] Discussion Our study successfully obtained a first look at the variability in groundfish densities in trawlable and untrawlable habitats for a study area off Washington. We also developed a framework to use these types of observations to derive sample size guidelines for designing larger-scale studies to estimate the trawl survey habitat bias. The limited geographic scope of our study precludes extrapolation (mathematics, algorithm) extrapolation - A mathematical procedure which estimates values of a function for certain desired inputs given values for known inputs. If the desired input is outside the range of the known values this is called extrapolation, if it is inside then of our specific results to the west coast at large. However, we demonstrated an approach that can be used to establish sample size guidelines for future work by illustrating the interplay between statistical sampling power and 1) habitat-specific density differences, 2) variance of density estimates, and 3) the proportion of untrawlable area in a habitat. In our study area, we observed striking differences in species composition and fish density between the trawlable and untrawlable habitats. Flatfish were more than ten times as abundant in the trawlable habitat samples, whereas rockfish as a group were over three times as abundant in the untrawlable habitat samples. Silvergray, quillback, redstripe, and yelloweye rockfish were observed in the untrawlable habitat but not in any of the trawlable habitat samples. We know of no visual-transect data comparable to that presented here for fish abundances off Washington. However, previous habitat specific studies in other areas have also reported differences in species composition and fish densities between low relief (trawlable) and highly rugose ru·gose or ru·gous adj. Having many wrinkles or creases; ridged or wrinkled. rugose marked by ridges; wrinkled. (untrawlable) habitats. Richards (1986) conducted a submersible study in the Strait of Georgia Noun 1. Strait of Georgia - the strait separating Vancouver Island from the Canadian mainland , British Columbia British Columbia, province (2001 pop. 3,907,738), 366,255 sq mi (948,600 sq km), including 6,976 sq mi (18,068 sq km) of water surface, W Canada. Geography (21-140 m), and observed that the distribution of greenstriped, quillback, and yenoweye rockfish varied by depth and bottom type. Greenstriped rockfish were most abundant in fine sediment habitats, such as mud and cobble terrain. Quillback rockfish were most abundant in complex habitats, and yelloweye rockfish had higher densities in wall and complex habitats than in fine sediment habitats. In the coastal fjord fjord or fiord (fyôrd), steep-sided inlet of the sea characteristic of glaciated regions. Fjords probably resulted from the scouring by glaciers of valleys formed by any of several processes, including faulting and erosion by of Saanich Inlet Saanich Inlet is a body of salt water that lies between the Saanich Peninsula and the Malahat highlands of Vancouver Island, British Columbia, Canada. Located just northwest of Victoria, the Inlet is 24 km long, has a surface area of 65 square km, and its maximum depth is 225 m. , British Columbia (21-150 m), Murie et al. (1994) also reported that quillback rockfish density was higher in areas of complex or wall habitat, compared to areas of sand-mud habitat. Additionally, tiger, copper (S. caurinus), yellowtail, and yelloweye rockfish were observed only over complex or wall habitats, and greenstriped rockfish were seen mostly over sand-mud habitat. Using sunken sunk·en v. Obsolete A past participle of sink. adj. 1. Depressed, fallen in, or hollowed: sunken cheeks. 2. gill nets to sample trawlable and untrawlable habitats off Vancouver Island Vancouver Island (1991 pop. 579,921), 12,408 sq mi (32,137 sq km), SW British Columbia, Canada, in the Pacific Ocean; largest island off W North America. It is c.285 mi (460 km) long and c. , B.C. (198-311 m in depth), Matthews and Richards (1991) reported differences in species composition between trawlable and untrawlable areas and higher species diversity in trawlable habitat. Major species on trawlable bottom were Pacific ocean perch The Pacific ocean perch (Sebastes alutus) has a wide distribution in the North Pacific from southern California around the Pacific rim to northern Honshū, Japan, including the Bering Sea. (S. alutus), splitnose rockfish (S. diploproa), greenstriped rockfish, and bocaccio bo·cac·cio n. pl. bo·cac·cios A large, edible rockfish (Sebastes paucispinis) of American Pacific waters. [Alteration (perhaps influenced by Italian boccaccia, ugly mouth (S. paucispinis). Major species on untrawlable bottom were sharpchin (S. zacentrus) and redbanded rockfish (S. babcocki). In a submersible study conducted off Southeastern Alaska (188-290 m), Krieger (1993) compared the fish densities of 4 untrawlable sites with 16 trawlable or marginally trawlable sites, and reported that densities of large (>25 cm) rockfish (a category that included Pacific ocean perch, sharpchin rockfish, redstripe rockfish, and harlequin Harlequin (här`ləkwĭn, –kĭn): see commedia dell'arte. Harlequin Principal stock character of the Italian commedia dell'arte. rockfish (S. variegatus) were highest at trawlable sites. In a study of shortraker (S. borealis) and rougheye (S. aleutianus) rockfish conducted on the upper continental slope off southeastern Alaska (262-365 m), Krieger and Ito (1999) reported that soft substrates of sand or mud usually had the greatest densities; hard substrates of bedrock, cobble, or pebble had the least densities; and habitats containing steep slopes and numerous boulders had greater densities of rockfish than habitats with gradual slopes and few boulders. O'Connell and Carlile (1993) conducted a submersible survey off southeastern Alaska in two depth strata; shallow (<108 m) and deep (<108 m). Yelloweye rockfish were observed in cobble, continuous rock, broken rock and boulder habitats but were most abundant in broken rock and boulder habitats of the deep stratum. Habitat-specific studies in Oregon and California have used finer scales of habitat classification to characterize fish-habitat associations than our comparatively coarse trawlable or untrawlable classification. In Oregon waters, Stein et al. (1992) reported estimates offish density by habitat-type from a submersible study of six stations at Heceta Bank in waters ranging from 60 to 340 m in depth. Rockfishes, particularly pygmy (S. wilsoni), sharpchin, rosethorn, and yellowtail, dominated all substrates except mud, where Dover sole and blackbelly eelpouts (Lycodes pacificus) were most abundant. In California waters, Yoklavich et al. (2000) conducted a submersible study at Soquel canyon (94-305 m) in Monterey Bay. Cluster analysis Cluster analysis A statistical technique that identifies clusters of stocks whose returns are highly correlated within each cluster and relatively uncorrelated across clusters. Cluster analysis has identified groupings such as growth, cyclical, stable, and energy stocks. grouped fish densities into six habitat guilds; most distinct were 1) guild I (fish associated with uniform mud bottom of flat or low relief, dominated by stripetail rockfish (S. saxicola)) and guild VI (fish associated with rock-boulder habitat of low to high relief, dominated by pygmy rockfish). To contrast our results in Washington with findings from Oregon and California, we summarized the fish density estimates reported by Stein et al. (1992) and Yoklavich et al. (2000) into a format roughly comparable to our data. Differences in the objectives and methods of their studies precluded a rigorous quantitative comparison with our results, particularly because of differences in habitat classification and survey design (random sampling in our study, purposive pur·po·sive adj. 1. Having or serving a purpose. 2. Purposeful: purposive behavior. pur sampling in the other two studies). However, some interesting similarities are apparent if the most highly rugose habitats of these two studies are treated as a proxy for untrawlable habitat and if the low bottom relief habitats are treated as a proxy for trawlable habitat (Table 11). Seven species (italicized in Table 11) co-occurred in all three studies. For all three studies, greenstriped rockfish and Dover sole densities were higher in the trawlable habitat, and rosethorn, yelloweye and yellowtail rockfish densites were higher in the untrawlable habitat. Results were mixed for canary rockfish (more abundant in trawlable habitat in Washington but more abundant in untrawlable habitat in the Oregon and California studies) and lingcod (more abundant in trawlable habitat in Oregon but more abundant in untrawlable habitat in the Washington and California studies). The most striking contrast among the three studies was the much lower overall magnitude of the fish densities in Washington compared to Oregon and California. One possible explanation for this difference could be due to the nature of the respective study designs. The Oregon and California studies both targeted particular substrate The base layer of a structure such as a chip, multichip module (MCM), printed circuit board or disk platter. Silicon is the most widely used substrate for chips. Fiberglass (FR4) is mostly used for printed circuit boards, and ceramic is used for MCMs. types to characterize fish assemblages and fish habitat associations. Our study in Washington was structured to conduct random sampling within each of the two broad habitat classifications and thus did not focus purposively on particular local features (e.g. individual rock outcrops) which could serve as areas of more concentrated fish density. Another factor could be the nature of the fishing history of the study areas; the Washington site has long been subjected to heavy fishing pressure, whereas the other sites, particularly portions of the Soquel canyon site, may have received relatively less fishing pressure (Yoklavich (2)). It is also possible that zoogeographic differences, interannual variability, and the relatively small spatial scales of the sampled areas could also explain the differences in densities observed between the studies. The level of concordance among the habitat-specific studies reviewed in the present study suggests that the potential exists for differences in fish density between trawlable and untrawlable habitats. These differences can be of great importance in the interpretation of trawl survey results for groundfish stock assessments. The presently available data are insufficient, however, to accurately quantify the magnitude of the trawl-survey habitat bias for west coast groundfish stock assessment and management. First, the absolute magnitude absolute magnitude: see magnitude. of such a bias will depend largely on the amount of untrawlable habitat present, which is not well estimated at this time. Modern benthic mapping technology and geographic information systems are capable of yielding detailed habitat maps over large spatial scales for habitat area quantification, but such maps are not yet available for most of the west coast (Nasby, 2000). Second, although many of the habitat-specific studies conducted to date tend to support the notion of significant fish density differences between trawlable and untrawlable habitats on small scales, studies with larger geographic scope are needed in order to be relevant to the assessment and management of west coast benthic fishery stocks. In particular, studies structured a priori with stratified stratified /strat·i·fied/ (strat´i-fid) formed or arranged in layers. strat·i·fied adj. Arranged in the form of layers or strata. random sampling designs can afford improved statistical inference Inferential statistics or statistical induction comprises the use of statistics to make inferences concerning some unknown aspect of a population. It is distinguished from descriptive statistics. by providing representative observations and unbiased parameter estimates across a spectrum of habitat types. Estimation of the trawl-survey habitat-bias may not be the preferred solution to address habitat-specific density differences for all groundfish species. The approach is likely to work best for situations where 1) variability in the density estimates obtained from the survey used to sample both habitats (in our case, visual transects collected by submersible) is relatively small compared to the variability in the trawl survey, and 2) untrawlable habitat does not comprise a large portion of the area to be assessed. Our data suggest, for instance, that it would probably be unfeasible to estimate a trawl survey bias correction factor for lingcod. It appears that lingcod density can be estimated with relatively good precision in trawlable areas by the trawl survey (CV=O.20, Table 10). However, our submersible survey found high variability across both habitat types (CV=1.17, Table 9), which resulted in a relatively low-effect size-index threshold values for lingcod (e.g. [A.sub.u]/A [d.sub.b]=0.52, Table 10). The required sample size rapidly exceeded n = 100 submersible dive sites as the proportion of the management area that was untrawlable increased above 5% (P=80%, [alpha]=0.05; Fig. 8). In cases requiring such large sample sizes, estimation of a trawl-survey bias correction factor would probably not be an acceptable alternative to direct, synoptic syn·op·tic also syn·op·ti·cal adj. 1. Of or constituting a synopsis; presenting a summary of the principal parts or a general view of the whole. 2. a. Taking the same point of view. b. surveys structured to obtain unbiased estimates of abundance in untrawlable habitats. By contrast, the trawl survey bias correction factor approach may be more feasible for species where the ratio between the trawl survey and submersible survey variation is smaller. Our data suggest that flatfish may fall into this category. The trawl survey precision (CV=0.09, Table 10) in relation to the submersible survey precision (CV=0.65, Table 9) resulted in a relatively high-effect size-index threshold value for flatfish at the proportion level of 5% for area that was untrawlable ([d.sub.b]=5.65, Table 10). The required sample size was less than n = 25 submersible dive sites, even as the ratio of [A.sub.u]/A (the proportion of the management area that is untrawlable area) exceeded 30% (P=80%, [alpha]=0.05; Fig. 8). However, because our analysis aggregated flatfish as a group, these results do not address the estimation of a bias correction factor for individual species, which is a requirement for any correction factor to be useful for stock assessment purposes. [FIGURE 8 OMITTED] As for any survey method, the visual transect survey method has an array of advantages and disadvantages, which have been well chronicled elsewhere (Uzmann et al., 1977; Ralston et al., 1986; Butler et al., 1991; Adams et a1.,1995; Starr et al., 1996; Cailliet et al., 1999). Some of the disadvantages include 1) difficulties in fish identification, particularly for small fish or fish with subtle coloration col·or·a·tion n. 1. Arrangement of colors. 2. The sum of the beliefs or principles of a person, group, or institution. , 2) the potential for attraction or repulsion repulsion /re·pul·sion/ (re-pul´shun) 1. the act of driving apart or away; a force that tends to drive two bodies apart. 2. of fish from the submersible, 3) variation in countability due to habitat type; for example, due to reduced visibility when the submersible maneuvered off bottom to avoid large boulders, or the failure to detect fish hiding behind boulders, and 4) the limitation of the technique to quantifying the density of benthic species found in close proximity to the bottom. The advantages of the visual transect survey method include the ability 1) sample in habitats that are inaccessible to other survey methods, 2) observe in situ fish behavior, and 3) observe the distribution of fish and fish-habitat associations on a fit scale. Although our study was subject to the limitations of the visual transect method, we assumed that the method could reliably estimate (with a catchability ofq=l.0) the true density of selected demersal bottomfish in both trawlable and untrawlable habitats for evaluation of the habitat bias present in the trawl-survey approach (which does not allow for sampling in untrawlable habitat). We do not feel that this assumption was severely violated vi·o·late tr.v. vi·o·lat·ed, vi·o·lat·ing, vi·o·lates 1. To break or disregard (a law or promise, for example). 2. To assault (a person) sexually. 3. , although we have no objective measure of the potential biases of the method, and thus we cannot estimate the consequences of assumption failure. We did recognize clearly that difficulties in fish identification limited the number of species that we could quantitatively sample with this technique. Technological improvements in underwater videography vid·e·og·ra·phy n. The art or practice of using a video camera. vid e·og and image recognition software are likely to
enhance the capabilities of the visual transect survey technique in the
future.
In conclusion, it is clear that relatively large-scale surveys are needed to assess bottomfish densities in habitats that are not accessible to trawl survey gear. For some species, it may be possible to derive an area-specific trawl-survey bias correction factor, but for many other species it is likely that there will be no substitute for direct estimation of densities in untrawlable habitat on a routine and synoptic basis. In either case, stratified random sampling designs should be employed with sample sizes sufficient to ensure acceptable levels of statistical power. At present, the in situ visual transect submersible survey method appears to be a useful tool for this purpose, and the utility of this method will likely improve further with technological advances. Appendix I: Procedure used for estimating the swept transect area At each sample unit (submersible dive site), we estimated the total swept transect area, where the swept area ([m.sup.2]) = (average area swept per second [[m.sup.2]/sec]) x (total elapsed time e·lapsed time n. The measured duration of an event. Noun 1. elapsed time - the time that elapses while some event is occurring [seconds]). The average area swept per second ([m.sup.2]/sec) was computed for a set of randomly selected thirty second portions of each transect. Conceptually, we determined the average area swept per second for the subsampled areas from a series of adjacent trapezoids (Fig. 1). [FIGURE 1 OMITTED] For each trapezoid, we determined swept area (Ai) by measuring the width that was swept ([l.sub.i]) and distance that was swept ([T.sub.i]), where [A.sub.i] = 1 / 2([l.sub.i] + [l.sub.i+2])[T.sub.i]. The process involved a frame-by-frame analysis of the video image, which required tracking an object from the center of the video monitor display to the bottom edge of the video display for a known time interval (Fig. 2). The elapsed time for this interval was obtained from the video frame count, and was used to calculate area swept per second. [FIGURE 2 OMITTED] Width-swept estimates (l.sub.i) were calculated from 1) the distance between the laser spots on the video monitor display ([w.sub.i]), 2) the width of the video monitor display (V), and 3) the known distance between the lasers (W) (20 cm), where [l.sub.i] = VW / [w.sub.i]. Because the width that was swept varied as the submersible distance off bottom varied, it was measured for each block. The following procedure was performed in sequence: 1) [w.sub.i] was measured to the nearest millimeter One thousandth of a meter, or 1/25th of an inch. See metric system. , 2) an object on the seafloor adjacent to the laser spots was identified, 3) the videotape was advanced until the object appeared at the bottom of the video monitor display, and 4) [w.sub.i] was measured again (Fig. 2). The distance that was swept during this interval (T) is calculated trigonometrically by using the angle of the camera and constants estimated with the following procedures of Davis and Tusting (1991). The process is illustrated in Figures 3 and 4. [FIGURE 3-4 OMITTED] The variables of interest are T = the geodetic See geodetic coordinates. distance between the location of the laser spots on the seafloor and the bottom edge of the camera's field of view (distance swept); H = the height of the video camera above the sea floor; [alpha] = the angle of the camera lens; [theta Theta A measure of the rate of decline in the value of an option due to the passage of time. Theta can also be referred to as the time decay on the value of an option. If everything is held constant, then the option will lose value as time moves closer to the maturity of the option. ] = the tilt angle Noun 1. tilt angle - the angle a rocket makes with the vertical as it curves along its trajectory angle - the space between two lines or planes that intersect; the inclination of one line to another; measured in degrees or radians of the camera; D = the distance between the focal point focal point n. See focus. of the camera and the reflection of the laser spots on the seafloor; [D.sub.1] = the horizontal distance from the camera to a point on the sea floor at the center of the camera's field of view; [D.sub.2] = the horizontal distance from the camera to a point on the sea floor at the bottom edge of the field of view; and D' = the distance from the camera lens to the reflection of the laser spots on the seafloor; w = the distance measured between the laser spots as they appear on the video monitor display; W = the known distance (20 cm) between the lasers mounted in parallel on the camera housing. Note the following relationships: (2) [D.sub.1] = D' cos [theta], and H = D' sin [theta] (3) [D.sub.2] = H / tan([theta] + [alpha] / 2) = D' sin [theta] / tan([theta] + [alpha] / 2), In Equation 3, estimation of [D.sub.2] requires the height of the camera above the seafloor (H); however, the need for a direct measurement of H can be eliminated by using camera parameters that provide an independent estimate of D' (Fig. 4). [FIGURE 4 OMITTED] Figure 4 shows the relationships between the camera lens, image plane, and laser spots, where d is a constant representing the distance from the focal point to the image plane, and c is a constant representing the distance from the camera lens to the image plane (note that c may be positive or negative), Note that both d and c are specific to the video display monitor employed, W, [theta], and [alpha] are fixed, and w is observed. (4) D' = D - d - c, and D = d W / w. Therefore, (5) D' = d(W / w - 1) - c, Underwater tests were conducted and the constants c and d were estimated for Delta's video camera and laser set-up by following the procedures of Davis and Tusting (1991). The distance traveled (T) for each area-swept trapezoid (from the center of the image to the lower edge of camera field of view), then, is (6) T = [D.sub.1] - [D.sub.2] = D'(cos([pi] / 180 [theta]) - sin([pi] / 180 [theta]) / tan([pi] / 180([theta] + [alpha] /2). Appendix II Derivation of the trawl-survey habitat-bias estimator, and the trawl-survey habitat-bias effect size-index ([d.sub.b]) To estimate the trawl survey habitat bias, we contrasted 1) the traditional abundance estimator, which does not discriminate between fish density differences in trawlable and untrawlable habitats (habitat-biased), with 2) an unbiased abundance estimator that explicitly allows for density differences between trawlable and untrawlable habitats. Let [D.sub.t] = the true density in the trawlable habitat; [A.sub.t] = the area of trawlable habitat; [D.sub.u] = the true density in the trawlable habitat; [A.sub.u] = the area of untrawlable habitat; A = the total area = [A.sub.t] + [A.sub.u]; N = total abundance; and [DELTA] = the difference in true densities = [D.sub.t] - [D.sub.u]. Then, for the unbiased estimator, N = [D.sub.t][A.sub.t] + [D.sub.t][A.sub.t]. and for the biased estimator, N = [D.sub.t]A = [D.sub.t][A.sub.t] + [D.sub.t][A.sub.u]. The habitat bias, then, is the difference of the two estimators, or (1) Bias = ([D.sub.t][A.sub.t] + [D.sub.t][A.sub.u]) - ([D.sub.t][A.sub.t] + [D.sub.u][A.sub.u]) = ([D.sub.t] - [D.sub.u])[A.sub.u] = [DELTA][A.sub.u]. The total error in the abundance estimator is a function of both the bias and the variance V(Dt) of the fish density estimator (2) MSE MSE Mouse (computer) MSE Materials Science & Engineering MSE Mean Squared Error MSE Mean Square Error MSE Master of Science in Engineering MSE Manufacturing Systems Engineering MSE Mechanically Stabilized Earth = [Bias.sup.2] + ([A.sup.2])V([D.sub.t]), where V(Dt) describes the uncertainty in the abundance estimator. If the bias is much less than this uncertainty, then its impact will be minimal. Therefore, we arbitrarily set (3) [Bias.sup.2] = ([A.sup.2])V([D.sub.t]), and substituting [DELTA] Au for bias from Equation 1 into Equation 3 gives (4) [A.sub.u.sup.2][[DELTA].sup.2] = ([A.sup.2])V([D.sub.t]). Solving for [DELTA] gives (5) [DELTA] = A / [A.sub.u] SD([D.sub.t]), where SD([D.sub.t]) = the standard deviation of the trawl survey density estimator in the trawlable habitat. Thus, the effect size threshold used for detecting differences in mean density in the power analysis is a product of the arbitrary decision for the bias in the abundance estimator to be equal to its standard error. For the statistical power analysis, we expressed A (the difference in densities between habitats) as the standardized effect size index ([d.sub.b]) for a two-sample t-test (Cohen, 1988); dividing (Eq. 5) by an estimate of the population standard deviation, which yields [d.sub.b]==[A/[A.sub.u]SD([D.sub.t])/[s.sub.p]]
Table 1
Summary of the depth range in meters (m) and estimates of the
area-swept ([10.sup.3] [m.sup.2]) for randomly chosen sample units.
Site type: T = trawlable, U = untrawlable.
Surveyed area
Transect
Site Depth duration ([10.sup.3]
Site type (m) (minutes) [m.sup.2]) CV (%) SE
4 T 130-135 53.0 5.08 24 0.22
5 T 130-135 46.5 5.77 9 0.10
6 T 145-148 49.5 4.68 19 0.15
10 T 106-110 54.5 6.06 12 0.14
11 T 132-140 48.5 4.46 13 0.11
12 T 137-141 49.5 5.40 14 0.14
13 T 136-141 50.5 5.17 13 0.12
15 T 117-119 54.0 4.77 18 0.14
1 U 95-102 52.8 4.59 21 0.21
2 U 95-100 53.5 4.73 13 0.11
3 U 105-109 43.5 5.57 11 0.11
7 U 110-118 55.0 5.66 16 0.17
8 U 102-105 55.0 6.93 16 0.21
9 U 90-98 53.5 5.90 24 0.26
14 U 96-100 39.0 4.67 21 0.21
16 U 105-105 53.5 6.45 11 0.12
Table 2
Characterization of bottom type at sites classified a priori as
trawlable (T) and untrawlable (U) habitat. Microhabitat type
classifications include a primary (at least 50% of the area viewed) and
a secondary (over 20% of the area viewed) component; M = mud, P =
pebble, C = cobble, B = boulder, R = rock ridge.
Estimated coverage ([10.sup.3] [m.sup.2])
Low relief
Site
Site type M-M M-P P-P P-C C-P C-C
4 T 5.08 0.00 0.00 0.00 0.00 0.00
5 T 0.00 0.00 4.42 1.35 0.00 0.00
6 T 4.68 0.00 0.00 0.00 0.00 0.00
10 T 6.04 0.00 0.00 0.00 0.00 0.00
11 T 4.46 0.00 0.00 0.00 0.00 0.00
12 T 5.40 0.00 0.00 0.00 0.00 0.00
13 T 2.07 1.51 0.33 0.00 0.00 0.00
15 T 4.77 0.00 0.00 0.00 0.00 0.00
1 U 0.00 0.00 3.04 0.04 0.00 0.01
2 U 0.00 0.00 2.66 0.00 0.00 0.00
3 U 0.00 0.00 4.65 0.30 0.30 0.00
7 U 3.48 0.00 1.51 0.00 0.00 0.00
8 U 0.00 0.00 6.36 0.00 0.00 0.00
9 U 0.00 0.00 1.71 0.00 0.00 0.00
14 U 0.00 0.00 3.47 0.00 0.00 0.00
16 U 0.00 0.00 4.17 0.00 0.00 0.00
Totals T 32.50 1.51 4.75 1.35 0.00 0.00
U 3.48 0.00 27.57 0.34 0.30 0.01
Percent T 78.5% 3.7% 11.5% 3.3% 0.0% 0.0%
Estimated coverage
([10.sup.3] Estimated coverage
[m.sup.2]) ([10.sup.3] [m.sup.2])
Low relief High relief
Site
Site type Total M-B P-B C-B B-P
4 T 5.08 0.00 0.00 0.00 0.00
5 T 5.77 0.00 0.00 0.00 0.00
6 T 4.68 0.00 0.00 0.00 0.00
10 T 6.04 0.02 0.00 0.00 0.00
11 T 4.46 0.00 0.00 0.00 0.00
12 T 5.40 0.00 0.00 0.00 0.00
13 T 3.91 0.46 0.80 0.00 0.00
15 T 4.77 0.00 0.00 0.00 0.00
1 U 3.09 0.00 1.05 0.08 0.05
2 U 2.66 0.00 0.44 0.00 0.63
3 U 5.24 0.00 0.33 0.00 0.00
7 U 4.99 0.17 0.50 0.00 0.00
8 U 6.36 0.00 0.45 0.00 0.00
9 U 1.71 0.00 1.95 0.00 0.84
14 U 3.47 0.00 0.56 0.00 0.26
16 U 4.17 0.00 1.23 0.00 1.01
Totals T 40.11 0.48 0.80 0.00 0.00
U 31.69 0.17 6.51 0.08 2.80
Percent T 96.9% 1.2% 1.9% 0.0% 0.0%
Estimated coverage ([10.sup.3] [m.sup.2])
High relief
Site Station
Site type B-C B-B R-R Total total
4 T 0.00 0.00 0.00 0.00 5.08
5 T 0.00 0.00 0.00 0.00 5.77
6 T 0.00 0.00 0.00 0.00 4.68
10 T 0.00 0.00 0.00 0.02 6.06
11 T 0.00 0.00 0.00 0.00 4.46
12 T 0.00 0.00 0.00 0.00 5.40
13 T 0.00 0.00 0.00 1.26 5.17
15 T 0.00 0.00 0.00 0.00 4.77
1 U 0.31 0.00 0.00 1.49 4.59
2 U 1.00 0.00 0.00 2.07 4.73
3 U 0.00 0.00 0.00 0.33 5.57
7 U 0.00 0.00 0.00 0.67 5.66
8 U 0.00 0.05 0.07 0.57 6.93
9 U 1.36 0.04 0.00 4.19 5.90
14 U 0.01 0.07 0.29 1.19 4.67
16 U 0.00 0.05 0.00 2.28 6.45
Totals T 0.00 0.00 0.00 1.28 41.39
U 2.69 0.20 0.36 12.80 44.50
Percent T 0.0% 0.0% 0.0% 3.1% 100.0%
Table 3
Common and scientific names of fishes observed at 16 submersible
dive sites off Cape Flattery, Washington.
Common name Scientific name
Canary rockfish Sebastes pinniger
Greenstriped rockfish Sebastes elongatus
Quillback rockfish Sebastes maliger
Redstripe rockfish Sebastes proriger
Rosethorn rockfish Sebastes
helvomaculatus
Silvergray rockfish Sebastes brevispinis
Tiger rockfish Sebastes nigrocinctus
Yelloweye rockfish Sebastes ruberrimus
Yellowtail rockfish Sebastes flavidus
Greenling Hexagrammos spp.
Lingcod Ophiodon elongatus
Pacific cod Gadus macrocephalus
Arrowtooth flounder Atheresthes stomias
Dover sole Microstomus pacificus
Pacific halibut Hippoglossus stenolepis
Spotted ratfish Hydrolagus colliei
Spiny dogfish Squalus acanthias
Longnose skate Raja rhina
Big skate Raja binoculata
Salmon Oncorhynchus spp.
Wolf-eel Anarrhichthys ocellatus
Eelpout Zoarcidae
Poacher Agonidae
Generic group classifications
Unidentified rockfish Sebastes spp.
Unidentified flatfish Pleuronectiformes
Unidentified roundfish Osteichthyes
Table 4
Summary of fish counts for large (>20 cm) and small (<20 cm) fish for
major fish groups. Site type: T = trawlable, U = untrawlable.
Number of large fish (> 20 cm)
Site
Site type Rockfish Lingcod Flatfish Other Total
4 T 0 1 77 8 86
5 T 8 0 54 17 79
6 T 2 0 76 12 90
10 T 7 3 29 5 44
11 T 0 1 35 10 46
12 T 0 0 46 5 51
13 T 39 1 119 19 178
15 T 0 0 31 2 33
1 U 115 1 6 16 138
2 U 128 14 12 28 182
3 U 9 2 28 10 49
7 U 43 9 13 22 87
8 U 32 3 4 9 48
9 U 206 5 6 14 231
14 U 30 3 8 11 52
16 U 111 5 30 9 155
Totals T 56 6 467 78 607
U 674 42 107 119 942
All 730 48 574 197 1549
Number of small fish (< 20 cm)
Site
Site type Rockfish Flatfish Other Total
4 T 0 95 48 143
5 T 0 94 15 109
6 T 0 68 63 131
10 T 0 26 107 133
11 T 0 8 101 109
12 T 0 6 63 69
13 T 0 77 37 114
15 T 0 70 64 134
1 U 43 0 10 53
2 U 348 3 52 403
3 U 41 9 58 108
7 U 0 21 46 67
8 U 40 2 12 54
9 U 339 0 11 350
14 U 38 7 27 72
16 U 28 4 17 49
Totals T 0 444 498 942
U 877 46 233 1156
All 877 490 731 2098
Table 5
Summary of fish counts by site for large rockfish (>20 cm). Site type:
T = trawlable, U = untrawlable.
Number of fish (>20 cm)
Site Rose- Yellow- Silver- Green-
Site type thorn tail gray striped Canary
4 T 0 0 0 0 0
5 T 0 0 0 8 0
6 T 0 0 0 2 0
10 T 0 0 0 0 2
11 T 0 0 0 0 0
12 T 0 0 0 0 0
13 T 2 1 0 14 0
15 T 0 0 0 0 0
1 U 31 1 0 9 0
2 U 88 3 0 0 0
3 U 8 0 0 0 0
7 U 16 14 0 1 0
8 U 25 2 0 1 2
9 U 121 1 1 3 0
14 U 15 10 0 1 0
16 U 34 17 3 0 0
Totals T 2 1 0 24 2
U 338 48 4 15 2
All 340 49 4 39 4
Number of fish (>20 cm)
Site Quill- Red- Yellow
Site type back stripe Tiger eye Unidentified
4 T 0 0 0 0 0
5 T 0 0 0 0 0
6 T 0 0 0 0 0
10 T 0 0 0 0 5
11 T 0 0 0 0 0
12 T 0 0 0 0 0
13 T 0 0 1 0 21
15 T 0 0 0 0 0
1 U 1 0 0 8 65
2 U 0 0 7 12 18
3 U 0 0 0 1 0
7 U 0 0 2 3 7
8 U 0 0 1 0 1
9 U 0 16 6 5 53
14 U 0 0 1 0 3
16 U 0 0 2 7 48
Totals T 0 0 1 0 26
U 1 16 19 36 195
All 1 16 20 36 221
Number of fish (>20 cm)
Site
Site type Total
4 T 0
5 T 8
6 T 2
10 T 7
11 T 0
12 T 0
13 T 39
15 T 0
1 U 115
2 U 128
3 U 9
7 U 43
8 U 32
9 U 206
14 U 30
16 U 111
Totals T 56
U 674
All 730
Table 6
Summary of fish counts by site for large flatfish (>20 cm). Site type:
T = trawlable, U = untrawlable.
Number of fish (>20 cm)
Site Arrowtooth Dover Pacific Uniden-
Site type flounder sole halibut tified Total
4 T 3 6 2 66 77
5 T 3 8 1 42 54
6 T 15 2 6 53 76
10 T 0 3 3 23 29
11 T 1 2 3 28 35
12 T 5 2 5 34 46
13 T 10 13 7 89 119
15 T 0 2 1 28 31
1 U 0 4 0 2 6
2 U 0 2 0 10 12
3 U 0 4 2 22 28
7 U 0 0 5 8 13
8 U 0 0 0 4 4
9 U 0 1 1 4 6
14 U 0 1 0 7 8
16 U 1 0 0 29 30
Totals T 37 39 28 363 467
All 38 51 36 449 574
Table 7
Summary of fish counts by site for other large (>20 cm) fish. Site
type: T = trawlable, U = untrawlable.
Number of fish (>20 cm)
Site Pacific Spiny Skates/
Site type Greenling cod Ratfish dogfish Rays
4 T 0 0 0 0 0
5 T 0 0 6 1 0
6 T 0 0 0 0 1
10 T 0 0 0 0 4
11 T 0 0 0 0 1
12 T 0 2 0 0 1
13 T 0 1 1 6 5
15 T 0 0 0 0 0
1 U 2 0 1 0 0
2 U 1 0 1 0 0
3 U 1 0 1 0 1
7 U 3 0 0 0 4
8 U 2 0 2 0 0
9 U 2 0 6 0 0
14 U 0 0 2 0 0
16 U 1 0 5 0 0
Totals T 0 3 7 7 12
U 12 0 18 0 5
All 12 3 25 7 17
Number of fish (>20 cm)
Site
Site type Eelpout Salmon Unidentified Total
4 T 8 0 0 8
5 T 10 0 0 17
6 T 11 0 0 12
10 T 1 0 0 5
11 T 8 1 0 10
12 T 2 0 0 5
13 T 5 0 1 19
15 T 1 0 1 2
1 U 12 0 1 16
2 U 26 0 0 28
3 U 6 0 1 10
7 U 15 0 0 22
8 U 5 0 0 9
9 U 5 0 1 14
14 U 9 0 0 11
16 U 3 0 0 9
Totals T 46 1 2 78
U 81 0 3 119
All 127 1 5 197
Table 8
Composition of fish densities in trawlable and untrawlable sites by
species (>20 cm), ranked in descending order of observed abundance
(avg. no./hectare). Italicized species were not found in the other
habitat type.
Trawlable sites
Species or group Avg. no./hectare
Eelpout 11.46
Dover sole 9.33
Arrowtooth flounder 9.25
Pacific halibut 6.88
Greenstriped rockfish 5.65
Skate 2.81
Spiny dogfish* 1.67
Spotted ratfish 1.54
Lingcod 1.39
Pacific cod* 0.70
Rosethorn rockfish 0.48
Canary rockfish 0.41
Salmon* 0.28
Yellowtail rockfish 0.24
Tiger rockfish 0.24
Generic group
All flatfish 114.29
All rockfish 13.14
All fish 146.65
Untrawlable sites
Species or group Avg. no./hectare
Rosethorn rockfish 77.78
Eelpout 19.26
Yellowtail rockfish 10.70
Lingcod 9.78
Yelloweye rockfish* 8.65
Tiger rockfish 4.40
Spotted ratfish 3.90
Greenstriped rockfish 3.76
Redstripe rockfish* 3.39
Dover sole 3.00
Greenling* 2.67
Pacific halibut 1.77
Skate 1.11
Silvergray rockfish* 0.79
Wolf-eel* 0.49
Canary rockfish 0.36
Quillback rockfish* 0.27
Arrowtooth flounder 0.19
All flatfish 23.90
All rockfish 155.63
All fish 211.70
Note: Italicized species indicated with *.
Table 9
Summary of estimated fish densities (no./hectare) and summary
statistics for selected fish groups (>20 cm). Site type: T = trawlable,
U = untrawlable.
Estimated fish density (number/
[10.sup.3] [m.sup.2])
Rockfish Flatfish
Site Site type Mean SE Mean SE
4 T 0.00 0.00 15.16 8.55
5 T 1.39 0.10 9.36 1.26
6 T 0.43 0.63 16.26 3.70
10 T 1.15 1.96 4.78 0.45
11 T 0.00 0.00 7.84 3.54
12 T 0.00 0.00 8.52 1.12
13 T 7.54 9.23 23.01 8.97
15 T 0.00 0.00 6.49 3.13
1 U 25.07 29.36 1.31 0.54
2 U 27.05 19.23 2.54 1.61
3 U 1.61 2.68 5.02 4.63
7 U 7.60 8.83 2.30 1.29
8 U 4.62 0.97 0.58 0.55
9 U 34.92 15.63 1.02 0.12
14 U 6.43 7.41 1.71 1.62
16 U 17.20 7.37 4.65 2.58
Summary statistics
[m.sub.t] 1.31 11.43
[s.sup.2.sub.t] 6.64 37.92
[m.sub.u] 15.56 2.39
[s.sup.2.sub.u] 151.58 2.69
Cochran's test for homogeneity of variance (Winer 1971);
[C.sub.crit] = 0.83
C 0.96 0.93
Mann Whitney test for equality of fish densities (Winer 1971);
[U.sub.crit] = 51
U 61 63
Statistics to calculate effect size index (d) for submersible survey
power analysis
|[m.sub.t]-[m.sub.u]| 14.25 9.04
[s.sub.p] 8.894 4.51
d 1.6 2.0
Estimated fish density (number/
[10.sup.3] [m.sup.2])
Lingcod Yelloweye rockfish
Site Site type Mean SE Mean SE
4 T 0.20 0.28 0.00 0.00
5 T 0.00 0.00 0.00 0.00
6 T 0.00 0.00 0.00 0.00
10 T 0.49 0.02 0.00 0.00
11 T 0.22 0.36 0.00 0.00
12 T 0.00 0.00 0.00 0.00
13 T 0.19 0.40 0.00 0.00
15 T 0.00 0.00 0.00 0.00
1 U 0.22 0.34 1.74 1.79
2 U 2.96 2.49 2.54 2.00
3 U 0.36 0.28 0.18 0.30
7 U 1.59 2.65 0.53 0.88
8 U 0.43 0.06 0.00 0.00
9 U 0.85 0.47 0.85 0.93
14 U 0.64 0.80 0.00 0.00
16 U 0.77 0.51 1.08 0.93
Summary statistics
[m.sub.t] 0.14 0.00
[s.sup.2.sub.t] 0.03 0.00
[m.sub.u] 0.98 0.87
[s.sup.2.sub.u] 0.82 0.81
Cochran's test for homogeneity of variance (Winer 1971);
[C.sub.crit] = 0.83
C 0.96 1.00
Mann Whitney test for equality of fish densities (Winer 1971);
[U.sub.crit] = 51
U 60 56
Statistics to calculate effect size index (d) for submersible survey
power analysis
|[m.sub.t]-[m.sub.u]| 0.84 0.87
[s.sub.p] 0.65 0.64
d 1.3 1.4
Estimated fish density (number/
[10.sup.3] [m.sup.2])
Tiger rockfish
Site Site type Mean SE
4 T 0.00 0.00
5 T 0.00 0.00
6 T 0.00 0.00
10 T 0.00 0.00
11 T 0.00 0.00
12 T 0.00 0.00
13 T 0.19 0.40
15 T 0.00 0.00
1 U 0.00 0.00
2 U 1.48 1.24
3 U 0.00 0.00
7 U 0.35 0.59
8 U 0.14 0.27
9 U 1.02 1.19
14 U 0.21 0.27
16 U 0.31 0.28
Summary statistics
[m.sub.t] 0.02
[s.sup.2.sub.t] 0.00
[m.sub.u] 0.44
[s.sup.2.sub.u] 0.28
Cochran's test for homogeneity of variance (Winer 1971);
[C.sub.crit] = 0.83
C 0.98
Mann Whitney test for equality of fish densities (Winer 1971);
[U.sub.crit] = 51
U 5.1
Statistics to calculate effect size index (d) for submersible survey
power analysis
|[m.sub.t]-[m.sub.u]| 0.42
[s.sub.p] 0.38
d 1.1
Table 10
Statistics used to calculate the trawl-survey habitat-bias
effect size-index (dy) derived from observations of the present study.
[d.sub.b]
Trawl survey Submersible survey
Species or density ([D.sub.t]) Trawl survey [s.sub.p] (no./
group (no./hectare) SD([D.sub.t]) hectare)
Rockfish 58.94 12.97 88.94
Flatfish 141.38 12.72 45.07
Lingcod 0.85 0.17 6.52
Proportion Trawls-survey habitats-bias effect size-index
untrawlable ([d.sub.b])
[A.sub.u]/A Rockfish Flatfish Lingcod
0.50 0.29 0.56 0.05
0.45 0.32 0.63 0.06
0.40 0.36 0.71 0.07
0.35 0.42 0.81 0.07
0.30 0.49 0.94 0.09
0.25 0.58 1.13 0.10
0.20 0.73 1.41 0.13
0.15 0.97 1.88 0.17
0.10 1.46 2.82 0.26
0.05 2.92 5.65 0.52
Table 11
Comparison of fish density estimates (average number of
fish/hectare) in trawlable ([D.sub.t]) and untrawlable ([D.sub.u])
habitats from sub-mersible studies in Washington, Oregon, and
California. Densities for italicized species were reported in all
three studies.
Washington (present study)
Species [D.sub.t] [D.sub.u]
Rockfish
Bank rockfish
Bocaccio
Canary rockfish 0.41 0.36
Cowcod
Darkblotched rockfish
Greenblotched rockfish
Greenspotted rockfish
Greenspotted and
greenblotched
rockfish
Greenstriped rockfish 5.65 3.76
Halfbanded rockfish
Pygmy rockfish
Quillback rockfish 0.27
Redstripe rockfish 3.39
Rosethorn rockfish 0.48 77.78
Sharpchin rockfish
Shortspine thornyhead
Stripetail rockfish
Tiger rockfish 0.24 4.40
Widow rockfish
Yelloweye rockfish 8.65
Yellowtail rockfish 0.24 10.70
Flatfish
Arrowtooth flounder 9.25 0.19
Dover sole 9.33 3.00
Pacific halibut 6.88 1.77
Other Fish
Eelpout 11.46 19.26
Greenling 2.67
Lingcod 1.39 9.78
Pacific cod 0.70
Pacific hagfish
Pacific hake
Poachers
Spotted ratfish 1.54 3.90
Salmon 0.28
Skate 2.81 1.11
Spiny dogfish 1.67
Wolf-eel 0.49
Oregon (1)
Species [D.sub.t] [D.sub.u]
Rockfish
Bank rockfish
Bocaccio
Canary rockfish 120.00
Cowcod 4.33
Darkblotched rockfish
Greenblotched rockfish
Greenspotted rockfish
Greenspotted and
greenblotched
rockfish
Greenstriped rockfish 165.00 39.50
Halfbanded rockfish
Pygmy rockfish 510.00 892.50
Quillback rockfish
Redstripe rockfish
Rosethorn rockfish 479.50 574.50
Sharpchin rockfish
Shortspine thornyhead 119.50
Stripetail rockfish 304.67
Tiger rockfish
Widow rockfish
Yelloweye rockfish 13.50
Yellowtail rockfish 33.50 95.50
Flatfish
Arrowtooth flounder
Dover sole 249.50 7.50
Pacific halibut
Other Fish
Eelpout
Greenling
Lingcod 33.50 15.00
Pacific cod
Pacific hagfish
Pacific hake
Poachers 93.00 9.00
Spotted ratfish
Salmon
Skate
Spiny dogfish
Wolf-eel
California (2)
Species [D.sub.t] [D.sub.u]
Rockfish
Bank rockfish 0.00 105.00
Bocaccio 6.33 586.00
Canary rockfish 0.00 148.00
Cowcod 152.67
Darkblotched rockfish 86.33 52.00
Greenblotched rockfish 1.33 36.33
Greenspotted rockfish 162.33 237.67
Greenspotted and
greenblotched 1.67 16.33
rockfish
Greenstriped rockfish 218.67 46.00
Halfbanded rockfish 220.00 85.67
Pygmy rockfish 126.33 734.33
Quillback rockfish
Redstripe rockfish
Rosethorn rockfish 40.33 175.33
Sharpchin rockfish 96.50 138.50
Shortspine thornyhead 41.33 5.33
Stripetail rockfish 63.67
Tiger rockfish
Widow rockfish 0.33 33.67
Yelloweye rockfish 0.67 78.67
Yellowtail rockfish 2.67 28.00
Flatfish
Arrowtooth flounder
Dover sole 58.00 3.00
Pacific halibut
Other Fish
Eelpout
Greenling
Lingcod 43.67 91.67
Pacific cod
Pacific hagfish 25.67 4.00
Pacific hake 14.67 14.00
Poachers 138.00 22.67
Spotted ratfish
Salmon
Skate
Spiny dogfish
Wolf-eel
(1) Oregon data source: Table 3 of Stein et al. (1992).
Categories "mud" and mud-cobble" were averaged and used as a proxy
for trawlable habitat categories "flat rock" and "rock ridge"
were averaged and used as a proxy for untrawlable habitat.
(2.) California data source: Table 2 of Yoklavich et al.
(2000). Categories "mud," "cobble-mud" and "mud-pebble" were
averaged and used as a proxy for trawlable habitat; categories
"rock-mud," "rock ridge," and "rock boulder" were averaged and
used as a proxy for untrawlable habitat.
Acknowledgments We would like to thank Farron Wallace and Brian Culver cul·ver n. A dove or pigeon. [Middle English, from Old English culufre, from Vulgar Latin *columbra, from Latin columbula, diminutive of columba, dove.] for help during the submersible dive survey and with fish identification on the videotapes; Cindy Knudsen for videotape area-swept data collection; Kevin Redman and Colin Stewart (Williamson and Associates) for geophysical data analysis and mapping, and Mike Farnam, and Brian Bunge (USN) for geophysical data acquisition; the captains and crews of the USN Agate Passage and FV Auriga for excellent support vessel services; D. Slater, C. Ijames, and J. Lilly of Delta Oceanographics for safe and efficient use of the Delta submersible; Victoria O'Connell and Waldo Wakefield for advice on field logistics and data collection; and Marion Larkin (FV Larkin), for his insights regarding trawlable and untrawlable habitat obtained from many years of fishing experience in the study area. This study was supported by the NOAA NOAA abbr. National Oceanic and Atmospheric Administration Noun 1. NOAA - an agency in the Department of Commerce that maps the oceans and conserves their living resources; predicts changes to the earth's environment; National Undersea Research Program, West Coast and Polar Regions polar regions: see Antarctica; Arctic, the. Undersea Research Center, University of Alaska Fairbanks UAF is home to seven major research units: the Agricultural and Forestry Experiment Station; the Geophysical Institute, which operates the Poker Flat Research Range; the International Arctic Research Center; the Arctic Region Supercomputing Center; the Institute of Arctic Biology; the (grant no. UAF 98-0045), the Washington Department of Fish and Wildlife, and the National Marine Fisheries Service. (1) Goldfinger, C. 2001. Personal commun. Department of Geology, Oregon State University Oregon State University, at Corvallis; land-grant and state supported; coeducational; chartered 1858 as Corvallis College, opened 1865. In 1868 it was designated Oregon's land-grant agricultural college and was taken over completely by the state in 1885. , Corvalis, OR 97331. (2) Yoklavich, M. 2001. Personal commun. NMFS, Santa Cruz, California 95060. Literature cited Adams, P. B., J. L. Butler, C. H. Baxter, T. E. Laidig, K. A. Dahlin, and W. W. Wakefield. 1995. Population estimates of Pacific coast groundfishes from video transects and swept-area trawls. Fish. Bull. 93:446-455. Alverson, D. L. 1951. Deep water trawling survey off the coast of Washington (August 27-Octeber 19, 1951) Commercial Fisheries Review 13:11. U.S. Dep. Fish. Wild. Serv., Sep. 292. Auster, P. J., L. L. Stewart, and H. Sprunk. 1989. Scientific imaging with ROVs: tools and techniques. Mar. Technol. Soc. J. 23(3): 16-20. Butler, J. L., W. W. Wakefield, P. B. Adams, B. H. Robison, and C. H. Baxter. 1991. Application of line transect methods to surveying demersal communities with ROV's and manned submersibles. Proceedings of the Oceans 91 Conference, Honolulu, Hawaii For the city and county of Honolulu, see City & County of Honolulu. “Honolulu” redirects here. For other uses, see Honolulu (disambiguation). Honolulu is the capital as well as the most populous community of the State of Hawaii, United States. , 1-3 October 1991, p. 689496. Marine Technology Soc., Columbia, MD. Cailliet, G. M., A. H. Andrews, W. W. Wakefield, G. Moreno, and K. L. Rhodes. 1999. Fish faunal fau·na n. pl. fau·nas or fau·nae 1. (used with a sing. or pl. verb) Animals, especially the animals of a particular region or period, considered as a group. 2. and habitat analyses using trawls, camera sleds and submersibles in benthic deep-sea habitats off central California Central California can refer to one of several divisions or regions of the U.S state of California:
Caimi, F. M., J. H. Blatt, B. G. Grossman, D. Smith, J. Hooker, D. M. Kocak, and F. Gonzalez. 1993. Advanced underwater laser systems for ranging, size estimation, and profiling. Mar. Technol. Soc. J. 27(1):31-41. Cohen, J. 1988. Statistical power analysis for the behavioral sciences behavioral sciences, n.pl those sciences devoted to the study of human and animal behavior. , 2nd ed., 567 p. L. Erlbaum Associates, Hillsdale, NJ. Dark, T. A., and M. E. Wilkins. 1994. Distribution, abundance, and biological characteristics of groundfish off the coast of Washington, Oregon, and California, 1977-1986. U.S. Dep. Commer. Nat. Mar. Fish. Serv., NOAA Tech. Rep. NMFS 117, 73 p. Davis, D. L., and R. F. Tusting. 1991. Quantitative benthic photography using laser calibrations, 5 p. Undersea World, San Diego, CA. Dixon, W. F., and F. J. Massey. 1957. Introduction to statistical analysis, 2nd ed., p. 244-255. McGraw-Hill, New York New York, state, United States New York, Middle Atlantic state of the United States. It is bordered by Vermont, Massachusetts, Connecticut, and the Atlantic Ocean (E), New Jersey and Pennsylvania (S), Lakes Erie and Ontario and the Canadian province of , NY. Greene, H. G., M. M. Yoklavich, R. M. Starr, V. M. O'Connell, W. W. Wakefield, D. E. Sullivan, J. E. McRea, Jr., and G. M. Cailliet. 1999. A classification scheme for deep seafloor habitats. Oceanol. Acta 22(6):663-678. Gregory, R. S., J. T. Anderson, and E.L. Dalley. 1997. Distribution of juvenile Atlantic cod Gadus morhua relative to available habitat in Plaeentia Bay, Newfoundland. Northwest Atl. Fish. Organ. Sci. Counc. Stud stud 1. purebred. 2. a place, usually a farm, at which purebred animals are maintained and reproduced. stud animal an animal registered in a stud book. . 29:3-12. Krieger, K. J. 1993. Distribution and abundance of rockfish determined from a submersible and by bottom trawling Bottom trawling (known in the scientific community as Benthic trawling) is a fishing method which involves towing trawl nets along the sea floor, as opposed to pelagic trawling, where a net is towed higher in the water column. . Fish. Bull. 91:87-96. Krieger, IC J., and D. H. Ito. 1999. Distribution and abundance of shortraker rockfish, Sebastes borealis, and rougheye rockfish, S. aleutianus, determined from a manned submersible. Fish. Bull. 97: 264-272. Kulbicki, M., and L. Wantiez. 1990. Comparison between fish bycatch from shrimp trawlnet and visual censuses in St.Vincent Bay, New Caledonia New Caledonia, Fr. Nouvelle Calédonie, internally self-governing territory of France (2005 est. pop. 216,000), land area 7,241 sq mi (18,760 sq km), South Pacific, c.700 mi (1,130 km) E of Australia. . Fish. Bull. 88:667-75. Matthews, K. R., and L. J. Richards. 1991. Rockfish (Scerpaenidae) assemblages of trawlable and untrawlable habitats off Vancouver Island, British Columbia. N. Am. J. Fish. Manage. 11:312-318. Murie, D. J., D. C. Parkyn, B. G. Clapp, and G. G. Krause. 1994. Observations on the distribution and activities of rockfish, Sebastes spp., in Sannich Inlet inlet /in·let/ (-let) a means or route of entrance. pelvic inlet the upper limit of the pelvic cavity. thoracic inlet the elliptical opening at the summit of the thorax. , British Columbia, from the Pisces IV submersible. Fish. Bull. 92:313-323. Nasby, N. M. 2000. Integration of submersible transect data and high-resolution sonar imagery for a habitat-based groundfish assessment of Heceta Bank, Oregon. M.S. thesis, 50 p. Marine Resource Management Program, College of Oceanic and Atmospheric Science, Oregon State Univ., Corvallis, OR. O'Connell, V. M., and D. W. Carlile. 1993. 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An ecological survey and comparison of bottom fish resources assessments (submersible versus handline fishing) at Johnston Atoll Johnston Atoll, atoll, 2.8 sq mi (7.25 sq km), central Pacific, c.700 nautical mi (1,300 km) SW of Honolulu, central Pacific, an uninc. territory of the United States. It consists of four islands and reefs. The largest island, Johnston Island, c. . Fish. Bull. 84:141-155. Richards, L. J. 1986. Depth and habitat distributions of three species of rockfish (Sebastes) in British Columbia: observations from the submersible Pisces IV. Environ en·vi·ron tr.v. en·vi·roned, en·vi·ron·ing, en·vi·rons To encircle; surround. See Synonyms at surround. [Middle English envirounen, from Old French environner . Biol. Fish. 17(1): 13-21. Shaw, F. R., M. E. Wilkins, K. L. Weinberg, M. Zimmermann, and R. R. Lauth. 2000. The 1998 Pacific West Coast bottom trawl survey of groundfish resources: estimates of distribution, abundance, and length and age composition. NOAA Technical Memorandum NMFS-AFSC-114, 138 p. Starr, R. M., D. S. Fox, M. A. Hixon, B. N. Tissot, G. E. Johnson, and W. H. Barss. 1996. Comparison of submersible-survey and hydroacoustic-survey estimates of fish density on a rocky bank. Fish. Bull. 94:113-123. Stein, D. L., B. N. Tissot, M. A. Hixon, and W. Barss. 1992. Fish-habitat associations on a deep reef at the edge of the Oregon continental shelf. Fish. Bull. 90:540-551. Uzmann, J. R., R. A. Cooper, R. B. Theroux, and R. L. Wigley. 1977. Synoptic comparison of three sampling techniques for estimating abundance and distribution of selected megafauna meg·a·fau·na n. (used with a sing. or pl. verb) Large or relatively large animals, as of a particular region or period, considered as a group. meg : submersible vs. camera sled vs. otter otter, name for a number of aquatic, carnivorous mammals of the weasel family, found on all continents except Australia. The common river otters of Eurasia and the Americas are species of the genus Lutra. The North American river otter, L. trawl. Mar. Fish. Rev. 39(12):11-19. Winer, B. J. 1971. Statistical principles in experimental design, 2nd ed., 907 p. McGraw Hill, New York, NY. Yoklavich, M. M., H. G. Greene, G. M. Cailliet, D. E. Sullivan, R. N. Lea, and M. S. Love. 2000. Habitat associations of deep-water rockfishes in a submarine canyon submarine canyon Narrow, steep-sided underwater valley cut into a continental slope. Submarine canyons resemble river canyons on land, usually having steep, rocky walls. They are found along most continental slopes. : an example of a natural refuge. Fish. Bull. 98:625-641. Manuscript approved for publication 12 February 2003 by Scientific Editor. Manuscript received 4 April 2003 at NMFS Scientific Publications Office. Fish Bull. 101:545-565 (2003). Thomas Jagielo Annette Hoffmann Jack Tagart Washington Department of Fish and Wildlife 600 Capitol Way N. Olympia, Washington Olympia is the capital of the U.S. state of Washington. It was incorporated on January 28, 1859. As of the 2000 census, it had a population of 42,514. Olympia is the county seat of Thurston County and a major cultural center of the Puget Sound region. 98501-1091 E-mail address (for T. Jagielo): jagiethj@dfw.wa.gov Mark Zimmermann National Marine Fisheries Service 7600 Sandpoint Way NE Seattle, Washington The reason for its protection is listed on the protection policy page. 98115-0070 |
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