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Cephamycin resistance in Clinical isolates and laboratory-derived strains of Escherichia coil, Nova Scotia, Canada.


AmpC [beta]-lactamase, altered porins, or both are usually responsible for cefoxitin resistance in Escherichia coil We examined the relative importance of each. We studied 18 strains of clinical isolates with reduced cefoxitin susceptibility and 10 initially-susceptible strains passaged through cefoxitin-gradient plates. Of 18 wild-resistant strains, 9 had identical promoter mutations (including creation of a consensus 17-bp spacer) and related pulsed-field gel electrophoresis gel electrophoresis
n.
Electrophoresis performed in a gel composed of agarose, polyacrylamide, or starch.
 patterns; the other 9 strains were unrelated. Nine strains had attenuator at·ten·u·a·tor  
n.
A device that attenuates an electrical signal.

Noun 1. attenuator - an electrical device for attenuating the strength of an electrical signal
 mutations; two strains did not express OmpC or OmpF. After serial passage, 8 of 10 strains developed cefoxitin resistance, none developed promoter or attenuator mutations, 6 lost both the OmpC and OmpF porin Porin can be:
  • Porin (protein), a transmembrane protein
  • Porin (music award), Croatian music award
  • Porin (opera), the first Croatian opera
 proteins, and 1 showed decreased production of both. One strain had neither porin alteration or increased AmpC production. Porin mutants may occur more commonly and be less fit and less inclined to spread or cause disease than strains with increased [beta]-lactamase expression.

**********

The development of antibiotic resistance antibiotic resistance,
n the ability of certain strains of microorganisms to develop resistance to antibiotics.

antibiotic resistance 
 in Escherichia coli Escherichia coli (ĕsh'ərĭk`ēə kō`lī), common bacterium that normally inhabits the intestinal tracts of humans and animals, but can cause infection in other parts of the body, especially the urinary tract.  has important clinical implications. E. coli E. coli: see Escherichia coli.
E. coli
 in full Escherichia coli

Species of bacterium that inhabits the stomach and intestines. E. coli can be transmitted by water, milk, food, or flies and other insects.
 is among the most frequently isolated bacterium in a variety of clinical settings. The development of resistance to older agents such as ampicillin ampicillin (ăm'pĭsĭl`ĭn), a penicillin-type antibiotic that is effective against both gram-negative microorganisms and gram-positive microorganisms such as Escherichia coli.  and trimethoprim-sulfamethoxazole, as well as the emerging problem of fluoroquinolone fluoroquinolone /flu·o·ro·quin·o·lone/ (-kwin´o-lon) any of a subgroup of fluorine-substituted quinolones, having a broader spectrum of activity than nalidixic acid.

fluor·o·quin·o·lone
n.
 resistance, may substantially limit our antibiotic choices (1,2).

Although cephamycin-resistant E. coli is relatively uncommon, widespread use of [beta]-lactam antiboties may contribute to the development and spread of these strains. In 1999, Sahm et el. reported that 0.16% of E. coil were resistant to cephamycins (3). At a local level, unpublished data from the Queen Elizabeth Queen Elizabeth, or Elizabeth, may refer to: Living people
  • Elizabeth II, Queen regnant of the Commonwealth Realms
Deceased people
Bohemia
 II Health Science Centre in Halifax, Nova Scotia For other uses, see Halifax.
Halifax, Nova Scotia may refer to any of the following:
  • Halifax Regional Municipality, capital of Nova Scotia, Canada
 indicated that, of the 5,767 strains of E. coli processed from urine samples, 0.4% were cephamycin resistant.

All strains of E. coli possess a gene that encodes an AmpC [beta]-lactamase. Usually, almost no [beta]-lactamase is produced because the gene is preceded by a weak promoter and a strong attenuator (4). Surveys of resistance mechanisms in cephamycin-resistant strains have most often identified promoter or attenuator mutations, which results in an up-regulation of AmpC [beta]-lactamase production (5-7). Occasionally, cephamycin-resistant strains bear mobilized [beta]-lactamases derived from bacteria such as Citrobacter feundii (8). In addition, mutation or altered expression of outer membrane The outer membrane refers to the outside membranes of Gram-negative bacteria, the chloroplast, or the mitochondria. It is used to maintain the shape of the organelle contained within its structure, and it acts as a barrier against certain dangers.  proteins constituting porins can also contribute to cephamycin resistance. To our knowledge, no investigators have concurrently looked for alterations in porins in addition to promoter-attenuator mutations. Porin alterations might work together to produce a higher level of resistance. In addition, porin alterations may protect E. coli and allow subsequent selection for promoter and attenuator mutants.

We examined E. coli strains collected at our hospital to determine the basis for resistance. In addition, we created cephamycin-resistant strains of E. coli by serial passage on cefoxitin-containing medium to determine which of these two resistance mechanisms was predominant and if our findings were representative of those seen in clinical isolates.

Materials and Methods

Bacterial Strains

We collected strains of E. coil from midstream urine from inpatients and from patients in the community. Eighteen strains with reduced susceptibility (MIC [greater than or equal to] 8 mg/L) to cefoxitin were included in the analysis, which represented all resistant strains collected during a 6-month period in 2001. For the in vitro in vitro /in vi·tro/ (in ve´tro) [L.] within a glass; observable in a test tube; in an artificial environment.

in vi·tro
adj.
In an artificial environment outside a living organism.
 development of resistance, we selected 10 clinical isolates from urine that were fully susceptible to [beta]-lactam antibiotics. In both cases, we excluded duplicate strains from the same patient. E. coli isolates were identified with conventional biochemical reactions. Organisms were identified by spot indole indole /in·dole/ (in´dol) a compound obtained from coal tar and indigo and produced by decomposition of tryptophan in the intestine, where it contributes to the peculiar odor of feces. It is excreted in the urine in the form of indican.  and [beta]-glucuronidase assays and confirmed by automated Vitek by using GNI GNI Gross National Income
GNI Global Nomads International
GNI Guyana News and Information
GNI Gay Naturists International
GNI Global Netoptex Inc.
GNI Great Northern Iron
GNI Gebäude Netzwerk Institut (German) 
+ cards, and antibiotic susceptibilities were performed by using GNS GNS GEOnet Names Server (NIMA)
GNS Global Network Services (INMARSAT)
GNS Guinea Franc
GNS Get Nearest Server (component of IPX and SAP)
GNS Global Navigation System
 606 cards (bioMerieux Canada Inc., St. Laurent, Quebec).

Analysis of Promoter and Attenuator Mutations

E. coli chromosomal DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 was isolated with a QIAmp DNA Mini Kit (Qiagen Inc., Valencia, CA), according to according to
prep.
1. As stated or indicated by; on the authority of: according to historians.

2. In keeping with: according to instructions.

3.
 the manufacturer's instructions. Using standard methods, we performed polymerase chain reaction polymerase chain reaction (pŏl`ĭmərās') (PCR), laboratory process in which a particular DNA segment from a mixture of DNA chains is rapidly replicated, producing a large, readily analyzed sample of a piece of DNA; the process is  (PCR PCR polymerase chain reaction.

PCR
abbr.
polymerase chain reaction


Polymerase chain reaction (PCR) 
) with a previously published primer set and protocol which amplifies the region of DNA including the 35 box of the AmpC promoter and the 3' end of the attenuator, producing a 271-bp amplicons (5). Amplification was performed in a PTC-200 Peltier Thermal Cycler (MJ Research, Boston, MA). The amplicons were resolved by 2% agarose gel electrophoresis Agarose gel electrophoresis is a method used in biochemistry and molecular biology to separate DNA, RNA, or protein molecules by size. This is achieved by moving negatively charged nucleic acid molecules through an agarose matrix with an electric field (electrophoresis).  and visualized after staining with ethidium bromide. The amplicons were purified by using the QIAquick PCR Purification Kit (Qiagen Inc.) and sequenced directly in both directions by using the dideoxy chain termination procedure of Sanger et al. on an ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother.


(Application Binary Interface) A specification for a specific hardware platform combined with the operating system.
 Prism automated sequencer See MIDI sequencer.

(music) sequencer - Any system for recording and/or playback of music via a programmable memory which stores music not as audio data, but as some representation of notes.
 at York University Core Molecular Laboratory, Toronto, Ontario, Canada.

Molecular Fingerprinting

Strains sharing similar promoter or attenuator mutations were fingerprinted by pulsed field gel electrophoresis Historical Background
Standard gel electrophoresis techniques for separation of DNA molecules provided huge advantages for molecular biology research. However, many limitations existed with the standard protocol in that it was unable to separate very large molecules of DNA
 (PFGE PFGE Pulsed-Field Gel Electrophoresis ) by using a modification of the method of Gautom (9). In brief, a standardized suspension of E. coli was prepared from overnight cultures and treated with lysozyme lysozyme: see immunity.
Lysozyme

An enyme that was first identified and named by Alexander Fleming, who recognized its bacteriolytic properties.
 and proteinase proteinase /pro·tein·ase/ (pro´ten-as?) endopeptidase.

pro·tein·ase
n.
A protease that begins the hydrolytic breakdown of proteins usually by splitting them into polypeptide chains.
 K. Plugs were prepared in low-melt agarose agarose

more highly purified form of agar with similar uses to agar and widely used in the separation of nucleic acid fragments.
. Solidified plugs were deproteinated with sodium lauryl sarcosine sar·co·sine
n.
An amino acid made synthetically or formed naturally during the decomposition of creatine.
 and proteinase K, and then washed repeatedly. Two millimeter slices of plug were digested with Xbal at 37[degrees]C for 3 h in the recommended buffer. Plugs were loaded onto a 1% agarose gel and resolved with a CHEF-Mapper system Bio-Rad Laboratories, Mississauga, Ontario).

Outer Membrane Profiles

Bacteria were grown overnight in Luria-Burtani (LB) broth with or without 4 mg/L of cefoxitin. To study Drop expression, 30 mL of LB broth was injected with 300 [micro]L of a bacterial cell suspension from an overnight culture. Cultures were incubated at 37[degrees]C in a shaking water bath at 250 rpm to an optical density at 600 nm of 1.0. Cell membranes were disrupted with a sonicator for 2 rain with 30-sec cycles intermittent on ice. Cell debris was removed by centrifugation Centrifugation

A mechanical method of separating immiscible liquids or solids from liquids by the application of centrifugal force. This force can be very great, and separations which proceed slowly by gravity can be speeded up enormously in centrifugal
 at 10,000 g for 10 min at 4[degrees]C. Cytoplasmic cytoplasmic

pertaining to or included in cytoplasm.


cytoplasmic inclusions
include secretory inclusions (enzymes, acids, proteins, mucosubstances), nutritive inclusions (glycogen, lipids), pigment granules (melanin, lipofuscin,
 membrane proteins were differentially solubilized for 20 min at room temperature with 1.7% sodium-lauryl-sarcosinate in 100 mM Tris, pH 8.0. The suspension was then centrifuged at 100,000 g for 20 min at 4[degrees]C, and the pellet containing the outer membrane proteins was resuspended in 100 [micro]L sterile distilled water. Omp preparations were analyzed by urea-sodium dodecyl sulfate-polyacrylamide gel electrophoresis at 30 mA in gels prepared with 11% acrylamide acrylamide /acryl·a·mide/ (ah-kril´ah-mid) a vinyl monomer used in the production of polymers with many industrial and research uses; the monomeric form is a neurotoxin. , 0.3% bisacrylamide, 8 M urea, and 0.1% SDS 1. (company) SDS - Scientific Data Systems.
2. (tool) SDS - Schema Definition Set.
 using the discontinuous discontinuous /dis·con·tin·u·ous/ (dis?kon-tin´u-us)
1. interrupted; intermittent; marked by breaks.

2. discrete; separate.

3. lacking logical order or coherence.
 buffer system of Laemmli (10). The gels were stained with Coomassie brilliant blue. The positions of OmpC and OmpF on the Omp profiles were ascertained by comparing the profiles of Omp preparations from the E. coli reference strains MII 1. (body) MII - A consortium of Microsoft, IBM, and Intel.

2. (storage) MII - A broadcast component video tape format licensed by Panasonic.
760 (ompR472 OmpC- OmpF+) and MH1461 (envz11 OmpC+ OmpF-) (11).

Development of Cefoxitin-resistant Strains

Cefoxitin-resistant mutants were obtained by serially passaging the wild type strains on 9 cm x 9 [cm.sup.2] gradient plates containing a maximum of 32 mg/L cefoxitin in MH agar, as previously described (12). Plates were incubated at room temperature overnight before use to ensure proper diffusion of the antibiotic. Streaked plates were incubated overnight at 37[degrees]C and the colony that grew furthest up the cefoxitin gradient was selected and replated on a fresh gradient plate the following day. A total of 12 passages were performed for each strain at a maximum concentration of 32 mg/L cefoxitin and an additional 15 passages at a maximum of 128 mg/L cefoxitin. Isoelectric focusing isoelectric focusing,
n the ordering and concentration of substances according to their isoelectric points.
 was performed by using a modification of the method (13).

Results

Each of the 18 strains with reduced susceptibility to cefoxitin was also resistant to ampicillin, cephalothin cephalothin

a first generation cephalosporin antibiotic. Sensitive organisms include many penicillin-resistant staphylococci.

cephalothin Cefalotin® Infectious disease A parenteral semisynthetic derivative of cephalosporin C, and 3
, and amoxicillin/clavulanate acid. All were imipenem susceptible. Isoelectric focusing demonstrated chromosomal AmpC in all strains; no other [beta]-lactamases were identified. A summary of promoter and attenuator mutations, as well as alterations in outer membrane profiles, is shown in Table 1 and Figures 1 and 2. Strains QE1-QE9 were identical or closely related by PFGE. Each strain had a 1-bp insertion in the spacer region between the -35 and -10 boxes. This insertion created a consensus 17-bp spacer. In addition to this mutation, these strains had additional mutations at-73, +6, and +81. Strain QE7 also had a deletion in the loop of the attenuator. None of these strains had changes in their outer membrane protein profiles.

[FIGURES 1-2 OMITTED]

The other nine strains (QE10-QE18) had different PFGE patterns and came from diverse locations (different hospitals and from both outpatients and inpatients). Strain QE10 had a C to T mutation at -42 and a G to A at -18, which created a novel consensus -35. Two strains had the T to A mutation at -32 that is necessary to create the stronger -35 consensus sequence (QE 14, 15). Strain QE 14 also had the -11 C to T mutation that created the stronger -10 consensus sequence (TACAAT).

Only two strains had no promoter or attenuation Loss of signal power in a transmission.
Attenuation

The reduction in level of a transmitted quantity as a function of a parameter, usually distance. It is applied mainly to acoustic or electromagnetic waves and is expressed as the ratio of power densities.
 loop mutations and no abnormalities of the outer membrane profile (QE16, QE 17). Both of these strains had the C to T mutation at position +58 of the attenuator. This mutation would appear not to influence the development of the attenuation loop.

Of the 10 susceptible strains that were serially passaged on gradient plates, 8 developed resistance to cefoxitin (strains LD1-LD5, LD8-LD10). One of these strains had mutations in the AmpC promoter or attenuator regions (Table 2); this strain had two mutations, including a C to T mutation in the left stern of the attenuator, which would result in the transcription of a weak attenuation loop. Both of the mutations were also seen in the initial clinical isolates. This strain also had absent Omp C and Omp F. The remaining cefoxitin-resistant strains either lacked Omp C and Omp F (six strains) or had decreased amounts of OmpC and OmpF (one strain). One strain had no mutations in the promoter or attenuator and normal amounts of Omp C and Omp F.

Discussion

The emergence of E. coli strains resistant to extended-spectrum cephalosporins Cephalosporins Definition

Cephalosporins are medicines that kill bacteria or prevent their growth.
Purpose

Cephalosporins are used to treat infections in different parts of the body—the ears, nose, throat, lungs, sinuses, and
 and cephamycins should be a cause of concern to clinicians managing infections in both the community and institutional setting. Extended-spectrum cephalosporins and penicillins combined with [beta]-lactamase inhibitors are frequently used for both empirical and definitive treatment of E. coli infections. Strains resistant to cephamycins have emerged in recent years. Some of these strains have become resistant by virtue of their hyperproduction of chromosomally encoded AmpC [beta]-lactamases (5-7). Others have acquired plasmidic [beta]-lactamases; most often those derived from Citrobacter freundii Citrobacter freundii Microbiology A Citrobacter opportunistic pathogen Management Cephalothin, aminoglycosides  (8).

In our survey of E. coli strains identified at our center, we found that no strains were resistant as a result of acquired-plasmid-mediated [beta]-lactamases. These strains all produced substantial amounts of AmpC [beta]-lactamase with the isoelectric point isoelectric point
n.
The pH at which the electrolyte concentration of an amphoteric substance such as protein is electrically zero because the concentration of its cation form equals the concentration of its anion form.
 characteristic of the E. coli-derived AmpC. The predominant reason for the hyperproduction of AmpC appeared to be promoter mutations, attenuator mutations, or both.

Half of the strains appeared to be clonal in origin in that they had the same promoter mutation and the same attenuator mutations. Several of the strains had additional attenuator mutations; however, all of these strains had the same pulsed-field pattern. None of the strains had alterations in their OmpC or OmpF profiles. These strains came from diverse locations within the Queen Elizabeth II Health Sciences Centre Queen Elizabeth II Health Sciences Centre, in Halifax, Nova Scotia, is a large teaching hospital affiliated with Dalhousie University.

The Queen Elizabeth II Health Sciences Centre was formed in 1997 by the provincial government during a health care administration
 complex and from other hospitals. Since we had limited information on the movement of the infected patients within the healthcare system, we are unable to define a common source.

The other nine strains had different pulsed-field patterns. Two strains each had similar promoter mutations, attenuator mutations, or both. Again, these strains came from different locations within our center, the community, and from referring hospitals. Two of these strains had altered outer membrane profiles; one lacked OmpF, the other OmpC. The promoter and attenuator mutations we detected were very remarkably similar to those that had been previously described in France, South Africa, Sweden, and Toronto, Canada. In particular the -42, -31, -18 mutations and spacer inserts have been consistently reported. The -11 promoter mutation that we observed was the second report of this mutation in the E. coli AmpC promoter (14).

We were able to develop resistance in 8 of 10 strains in vitro. Upon examination, seven of these strains had altered outer membrane protein profiles; six lacked both OmpC and OmpF, and one had decreased production of both of these porin proteins. One strain did not have promoter or attenuator mutations or alterations in the outer membrane protein profile. Sequencing of the promoters and attenuators indicated that only one had mutations that might have affected the amount of [beta]-lactamase produced. However, this mutation was present in the wild strain as well.

We found that promoter abnormalities were common in clinical strains but not in lab-generated cefoxitin-resistant isolates. Increased resistance to antimicrobial agents has been shown to be associated with loss of porins in E. coli and other gram-negative organisms (15-19). The major porin proteins of E. coli, OmpF and OmpC, are differentially expressed at the transcriptional level by the two-component regulatory proteins regulatory proteins

1. proteins which regulate the contraction of muscle by controlling the interaction of myosin and actin. Calcium is an essential component of this reaction. The two proteins are troponin and tropomyosin.

2.
, EnvZ and OmpR. The sensory protein, EnvZ, phosphorylates the transcriptional factor OmpR in response to environmental stress. The cellular level of the active form of OmpR, OmpR-phosphate (OmpR-P), is responsible for the differential expression of ompF and ompC (20). Therefore, the tension between the kinase and phosphatase phosphatase /phos·pha·tase/ (-tas) any of a group of enzymes that catalyze the hydrolytic cleavage of inorganic phosphate from esters.

phos·pha·tase
n.
 activities of EnvZ controls the level of active OmpR-P in the cell. In the resistant strains selected on gradient plates, we found that most lacked both major outer membrane proteins in comparison to the respective parent strain. The lack of outer membrane protein expression in these isolates could occur by several mechanisms, including loss of kinase activity of EnvZ and mutation of the transcription factor OmpR.

Alternatively, resistance may arise because of decreased pore diameter (21,22). The in vitro mutant without quantitative changes in Omp C or OmpF or promoter or attenuator mutations may have had this molecular lesion.

We postulate postulate: see axiom.  that, while porin deficient mutants are more readily selected by antimicrobial pressure, they are likely less fit. This finding is reflected by the fact that Omp changes are easily created in the laboratory but not found in clinical samples. As a result of their lower fitness, they are more likely to be replaced by wild E. coli when antimicrobial pressure has been removed. On the other hand, the widespread clonal dissemination of strains that hyperproduce AmpC by virtue of promoter or attenuator mutations suggests that they are much better able and more likely to contribute to the spread of cephamycin resistance.

The ampC [beta]-lactamase produced by E. coli hydrolyzes penicillins, cephalosporins, and cephamycins. In doing so, [beta]-lactamase increases the MICs to third-generation cephalosporins but, as our data suggest, seldom above the breakpoint The location in a program used to temporarily halt the program for testing and debugging. Lines of code in a source program are marked for breakpoints. When those instructions are about to be executed, the program stops, allowing the programmer to examine the status of the program  set by the National Committee for Clinical Laboratory Standards (NCCLS NCCLS National Committee for Clinical Laboratory Standards ). This situation is analogous to that of many TEM- and SHB-derived [beta]-lactamases. Using third-generation cephalosporins or penicillin [beta]-lactamase-inhibitor combinations to treat serious infections caused by ampC up-regulated strains may be more imprudent im·pru·dent  
adj.
Unwise or indiscreet; not prudent.



im·prudent·ly adv.
. Just as we would not be inclined to treat an E. coli bearing an extended spectrum [beta]-lactamase with a ceftriaxone ceftriaxone /cef·tri·ax·one/ (cef?tri-ak´son) a semisynthetic, ß–resistant, third-generation cephalosporin effective against a wide range of gram-positive and gram-negative bacteria, used as the sodium salt.  MIC of 2 mg/L with ceftriaxone, we would not treat an ampC [beta]-lactamase up-regulated E. coli strain with a third-generation cephalosporin cephalosporin (sĕf'əlōspôr`ĭn), any of a group of more than 20 antibiotics derived from species of fungi of the genus Cephalosporium and closely related chemically to penicillin. Cephalosporins, e.g. . To the best of our knowledge, no publication has documented treatment failures in such circumstances, and no NCCLS guidelines exist. Nevertheless, our practice is to report all of these strains as resistant to third-generation cephalosporins and to cautioning against their use.
Table 1. Summary of promoter/attenuator mutations and porin changes
in 18 clinical strains of Escherichia coli, arranged by pulsed-field
type (a)

                   MIC ([micro]g/mL)
PFGE                                    Patient        Promoter
type    Strain    FOX    CAZ    CRO    Location        mutations

A        QE1      16     <8     <8        HCC         T insertion
                                                       (-13) to
                                                       consensus
                                                    spacer (17 bp)
A1       QE2      8      <8     <8        FD          T insertion
                                                       (-13) to
                                                       consensus
                                                    spacer (17 bp)
A2       QE3      >32    <8     <8     Inpatient      T insertion
                                        Ward A         (-13) to
                                                       consensus
                                                    spacer (17 bp)
A2       QE4      16     <8     <8        FD          T insertion
                                                       (-13) to
                                                       consensus
                                                    spacer (17 bp)
A3       QE5      16     <8     <8        ER          T insertion
                                                       (-13) to
                                                       consensus
                                                    spacer (17 bp)
A4       QE6      >32    <8     <8        HCC         T insertion
                                                       (-13) to
                                                       consensus
                                                    spacer (17 bp)
A5       QE7      >32    <8     <8        HCC         T insertion
                                                       (-l3) to
                                                       consensus
                                                    spacer (l7 bp)
A        QE8      16     <8     <8        FD          T insertion
                                                       (-13) to
                                                       consensus
                                                    spacer (17 bp)
A        QE9      >32    16     <8     Inpatient      T insertion
                                        Ward B         (-13) to
                                                       consensus
                                                    spacer (17 bp)
B        QE10     >32    <8     <8     Inpatient     C to T (-42);
                                        Ward C          G to A
                                                     (-18); C to
                                                        T (-1)
C        QE11     >32    <8     <8     Inpatient     G to A (-18);
                                        Ward C        C to T (-1)
D        QE12     >32    <8     <8        FD         G to A (-18);
                                                      C to T (-1)
E        QE13     >32     16    <8        FD           G to A in
                                                     spacer (-28)
F        QE14     8      <8     <8        ER         T to A (-32),
                                                      new-35 box;
                                                     C to T (-11),
                                                      new-10 box
G        QE15     >32    16     <8     Inpatient     T to A (-32),
                                        Ward D        new-35 box
H        QE16     >32    <8     <8        HCC            None
I        QE17     16     <8     <8        FD             None
J        QEl8     >32    <8     <8     Inpatient         None
                                        Ward E

PFGE                                       Outer membrane
type        Attenuator mutations        protein (Omp) profile

A       G to A, right stem; C to T,       No abnormalities
           upstream of stem/loop
A1          C to T, upstream of           No abnormalities
                 stem/loop
A2       C to T, upstream of stem/        No abnormalities
        loop; C deletion, right stem
A2          C to T, upstream of           No abnormalities
                 stem/loop
A3          C to T, upstream of           No abnormalities
        stem/loop; C to T, left stem
A4          C to T, upstream of           No abnormalities
                 stem/loop
A5          C to T, upstream of           No abnormalities
        stein/loop; ATG deletion in
         loop/right stem (+27 -29)
A        C to T, upstream of stem/        No abnormalities
          loop; G to A, left stem
A        C to T, upstream of stem/       No abnormalities
          loop; G to A, right stem
B        C to A, left stem; C to T,       No abnormalities
          downstream of stem/loop
C          C to T, downstream of          No abnormalities
                 stem/loop
D            C to T, downstream                Omp F-
                 stem/loop
E            C to T, downstream           No abnormalities
                 stem/loop
F                   None                  No abnormalities

G                   None                       Omp C-

H            C to T, downstream           No abnormalities
                 stem/loop
I            C to T, downstream           No abnormalities
                 stem/loop
J         C deletion, right stem         No abnormalities
         (+31); C to T, downstream
                 stem/loop

(a) PFGE, pulsed-field gel elcetrophoresis; FOX, cefoxitin; CAZ,
ceftazidime CRO. ceftriaxone; HCC, Hants Community Clinic; FD,
family doctor's office; ER, emergency room.

Table 2. Effect of serial passage on cefoxitin gradient on promoter and
attenuator regions and outer membrane protein profiles of laboratory
wild type Escherichia coli (a, b)

          MIC before serial passage    MIC after serial passage
Strain          ([micro]g/mL)               ([micro]g/mL)

LD1                  <2                          >32
LD2                  <2                          >32
LD3                  <2                           16
LD4                  <2                          >32
LD5                  <2                          >32
LD6                  <2                            8
LD7                  <2                            4
LD8                  <2                           16
LD9                  <2                          >32
LD10                 <2                          >32

           Outer membrane protein (Omp)
Strain               profile

LD1                    None
LD2               Omp C-, Omp F-
LD3               Omp C-, Omp F-
LD4               Omp C-, Omp F-
LD5               Omp C-, Omp F-
LD6                  Not done
LD7                  Not done
LD8               Omp C-, Omp F-
LD9               Omp C-, Omp F-
LD10      Decreased production of OmpC/F

(a) Only those mutations that arose following serial passage are
shown. Some parental strains had mutations initially, which were
retained in the mutants.

(b) No promoler/attenuator mutations aflecled [beta]-lactamase
production.


This work was presented at the International Conference on Antimicrobial Agents and Chemotherapy Antimicrobial Agents and Chemotherapy (print-ISSN 0066-4804, CODEN AMACCQ; canceled ISSN 0074-9923, canceled CODEN AACHAX) is an academic journal published by the American Society for Microbiology.  (ICAAC ICAAC Interscience Conference on Antimicrobial Agents and Chemotherapy
ICAAC Iowa Community College Athletic Conference
) in San Diego, California “San Diego” redirects here. For other uses, see San Diego (disambiguation).
San Diego is a coastal Southern California city located in the southwestern corner of the continental United States. As of 2006, the city has a population of 1,256,951.
, in September 2002.

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(2.) Goldraich NP, Martini A. Febrile febrile /feb·rile/ (feb´ril) pertaining to or characterized by fever.

feb·rile
adj.
Of, relating to, or characterized by fever; feverish.
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FEMS Federation of European Materials Societies
FEMS Fabrication Engineering Management System
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SCN Sustainable Communities Network
SCN System Change Number (Oracle)
SCN Scientology
SCN Suprachiasmatic Nucleus
SCN Switched Circuit Network
SCN Standing Committee on Nutrition (UN) 
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(22.) Jeanteur D, Schirmer T, Fourel D, Simonet V, Rummel G, Widmer C, et al. Structural and functional alterations of a colicin-resistant mutant of OmpF porin from Escherichia coli. Proc Natl Acad Sci U S A 1994;91:10675-9.

Brian Clark,* Margot Hiltz, * Heather Musgrave, * and Kevin R. Forward *

* Dalhousie University and the Queen Elizabeth II Health Sciences Centre, Halifax, Nova Scotia, Canada

Mr. Clarke is a medical student at Dalhousie University, Halifax, Nova Scotia. He completed a bachelor of science Noun 1. Bachelor of Science - a bachelor's degree in science
BS, SB

bachelor's degree, baccalaureate - an academic degree conferred on someone who has successfully completed undergraduate studies
 honors biology program at St. Francis Xavier University and plans a career in internal medicine and infectious disease Infectious disease

A pathological condition spread among biological species. Infectious diseases, although varied in their effects, are always associated with viruses, bacteria, fungi, protozoa, multicellular parasites and aberrant proteins known as prions.
.

Address for correspondence: Kevin R. Forward, Division of Microbiology, Queen Elizabeth II Health Sciences Centre, 5788 University Avenue, Halifax, Nova Scotia B3H 1V8, Canada; thx: (902) 473-4432; email: kevin.forward@cdha.nshealth.ca
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Title Annotation:Research
Author:Forward, Kevin R.
Publication:Emerging Infectious Diseases
Date:Oct 1, 2003
Words:4023
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