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CURATED DATA COVERS OVER 2,000 HUMAN GENES.


LifeSpan BioSciences, Inc., Seattle, a leader in the emerging fields of molecular pathology Molecular pathology is an emerging discipline within pathology which is focused on the use of nucleic acid-based techniques such as DNA sequencing, fluorescent in-situ hybridization, reverse-transcriptase polymerase chain reaction, and nucleic acid microarrays for specialised studies of  and tissue proteomics, has launched its subscription DrugTarget Database, the first comprehensive resource on the expression and localization Customizing software and documentation for a particular country. It includes the translation of menus and messages into the native spoken language as well as changes in the user interface to accommodate different alphabets and culture. See internationalization and l10n.  of proteins at the cellular level. The database combines proprietary immunohistochemistry data, obtained by using specific antibodies to determine protein localization in normal and diseased human tissues, with manually curated data covering more than 2,000 human genes from eight gene families. These gene families, which include G protein-coupled receptors G protein-coupled receptors (GPCRs), also known as seven transmembrane receptors, 7TM receptors, heptahelical receptors, and G protein linked receptors (GPLR , ion channels ion channel
n.
See channel.
, kinases, nuclear receptors In the field of molecular biology, nuclear receptors are a class of proteins found within the interior of cells that are responsible for sensing the presence of hormones and certain other molecules. , phosphatases, phosphodiesterases, transporters, and proteases, contain the genes of greatest interest to the pharmaceutical industry as new drug targets.

"The ability to associate specific proteins with disease and to localize lo·cal·ize  
v. lo·cal·ized, lo·cal·iz·ing, lo·cal·iz·es

v.tr.
1. To make local: decentralize and localize political authority.

2.
 those proteins within tissues at the cellular level, is of critical importance for identifying and validating drug targets," said Joseph Brown, Ph.D., LifeSpan BioSciences' president and chief executive officer. "It is extremely valuable for selecting disease indications for new or existing drugs, and providing early warning about potential toxicity. Many drug targets are expressed in only a limited number of normal and diseased tissues, and their expression profiles may account for the pharmacological specificity of their ligands."

LifeSpan has compiled its detailed protein expression and localization information in an easy-to-search relational database relational database

Database in which all data are represented in tabular form. The description of a particular entity is provided by the set of its attribute values, stored as one row or record of the table, called a tuple.
, which includes thousands of high-resolution digital photomicrographs of immunostained tissue specimens from the industry's largest bank of diseased and normal tissue specimens. Each photomicrograph photomicrograph /pho·to·mi·cro·graph/ (fo?to-mi´kro-graf) a photograph of an object as seen through an ordinary light microscope.

pho·to·mi·cro·graph
n.
A photograph made through a microscope.
 is accompanied by written analysis from a Board-Certified Pathologist. The curated public data included in the database contain information on protein and nucleic acid nucleic acid, any of a group of organic substances found in the chromosomes of living cells and viruses that play a central role in the storage and replication of hereditary information and in the expression of this information through protein synthesis.  sequences, expressed sequence tags An expressed sequence tag or EST is a short sub-sequence of a transcribed spliced nucleotide sequence (either protein-coding or not). They may be used to identify gene transcripts, and are instrumental in gene discovery and gene sequence determination. , clones, publications and patents. LifeSpan's data analysts extract key information regarding tissue and cell-specific expression, disease associations, functional associations, and analytical methods, and provide links to other data resources. Information for each gene is summarized on a single page, providing fast, easy access and viewing over a secure Internet connection using a simple web browser The program that serves as your front end to the Web on the Internet. In order to view a site, you type its address (URL) into the browser's Location field; for example, www.computerlanguage.com, and the home page of that site is downloaded to you.  interface.

Subscriptions to the database involve a yearly fee, with a minimum three-year commitment. Subscribers receive data in real-time as it becomes available throughout the development period, which is expected to last three years. Each subscriber will have the opportunity to prioritize 100 genes for analysis and inclusion in the database. Up to 20 of those genes may be selected from outside the eight gene families specifically targeted for inclusion. Subscribers will access all data without any downstream royalties or licensing fees tied to discovery.

"While DNA microarrays and high-throughput sequence analyses provide information on mRNA expression at the whole tissue level, they cannot detect gene expression in individual cell types or structures," said Glenna Burmer, M.D., Ph.D., chief scientific officer of LifeSpan BioSciences. "In contrast, immunohistochemistry uses specific antibodies to provide information on protein expression, including which cell types express the protein. Immunohistochemistry also provides information about where in the cell the protein is expressed, thus giving insight into gene function. Finally, immunohistochemistry allows us to correlate protein expression with pathology at the microscopic level, to determine whether diseased cells express the protein. For these reasons, we believe the LifeSpan DrugTarget database represents an important next-generation resource for helping pharmaceutical researchers decide the complex relationships between genes, proteins and disease."

About LifeSpan BioSciences, Inc.

LifeSpan BioSciences, headquartered in Seattle, Wash., is a privately held genomics company founded in 1995 that utilizes proprietary molecular pathology and bioinformatics technology to profile and localize gene expression in normal and diseased human tissues for its more than 50 pharmaceutical company customers in Europe, Asia and North America North America, third largest continent (1990 est. pop. 365,000,000), c.9,400,000 sq mi (24,346,000 sq km), the northern of the two continents of the Western Hemisphere. . LifeSpan is currently applying its technology and expertise to the production of a comprehensive atlas on the expression of each of the 30,000 human genes in both normal and diseased tissues.

For more information, call 206/464-1554 or visit http://www.lsbio.com.
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Title Annotation:LifeSpan BioSciences' subscription DrugTarget Database
Comment:CURATED DATA COVERS OVER 2,000 HUMAN GENES.(LifeSpan BioSciences' subscription DrugTarget Database)
Publication:Online Product News
Geographic Code:1USA
Date:Jun 1, 2002
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