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COMPUGEN DEBUTS Z3 AUTOMATED 2D GEL ELECTROPHORESIS SYSTEM.


Compugen Ltd. (Nasdaq: CGEN CGEN Convective Sigmet Generation ), Tel Aviv Tel Aviv (tĕl əvēv`), city (1994 pop. 355,200), W central Israel, on the Mediterranean Sea. Oficially named Tel Aviv–Jaffa, it is Israel's commercial, financial, communications, and cultural center and the core of its largest , Israel, has launched its Z3 high throughput 2D gel electrophoresis gel electrophoresis
n.
Electrophoresis performed in a gel composed of agarose, polyacrylamide, or starch.
 analysis system. Z3 is Compugen's first product for proteomics research.

Proteomics is the study of gene expression at the protein level, aimed at identifying drug targets, therapeutic proteins and diagnostic markers. Proteomics is a rapidly growing field, expected to have far reaching implications for drug development and discovery.

2D gel electrophoresis is the method of choice for separating complex mixtures of proteins, the first step in the typical proteomics research workflow. However, despite the growing need for this capability, the 2D gel technique is only partially exploited, due to difficulties both with the reproducibility of the technique, and with the analysis of the results. Z3 is designed to address these difficulties by automating the 2D gel analysis process through the use of proprietary algorithms for both gel comparisons and the computation of differential expression. Z3 has demonstrated the ability to significantly expedite, simplify and improve 2D gel analysis.

"Z3 has been in beta test A test of new or revised hardware or software that is performed by users at their facilities under normal operating conditions. Beta testing follows alpha testing. Vendors of packaged software often offer their customers the opportunity of beta testing new releases or versions, and the  since early this year at a number of commercial and academic institutions, and has been enthusiastically received," said Dr. Zeev Smilansky, vice president Proteomics, Compugen. Dr. Brad Walsh, Facility manager, Australian Proteome pro·te·ome
n.
The complete set of proteins that are produced by the genes of an organism.



proteome

the entire complement of proteins produced by a cell.
 Analysis commented, "After testing Z3 at the Australian Proteome Analysis Facility, we believe it is a revolutionary image analysis package with great potential for bringing a paradigm shift A dramatic change in methodology or practice. It often refers to a major change in thinking and planning, which ultimately changes the way projects are implemented. For example, accessing applications and data from the Web instead of from local servers is a paradigm shift. See paradigm.  to the way 2D gels are analyzed."

The Z3 software system is now commercially available under various licensing arrangements, including a pay per gel subscription model, by which gel analysis is consumed similarly to a reagent. In addition, Compugen has been beta testing (programming) beta testing - Testing a pre-release (potentially unreliable) version of a piece of software by making it available to selected users. This term derives from early 1960s terminology for product cycle checkpoints, first used at IBM but later standard throughout the , for a number of months, its Z3 based 2D gel image analysis service to be offered as part of LabOnWeb.com, Compugen's life science research engine for genomic, proteomic and transcriptomic analysis. Commercial availability of Z3 over LabOnWeb.com is anticipated by the fourth quarter of this year.

Prof. Dr. Helmut Meyer, CEO (1) (Chief Executive Officer) The highest individual in command of an organization. Typically the president of the company, the CEO reports to the Chairman of the Board. , Prot@gen, a proteomics company, known for its expertise in 2D gels, stated: "Compugen's Z3 image analysis software takes only 10 minutes to provide complete analysis of proteins, compared with the up to two days it takes for rival products. The Z3 software helps take the bottleneck out of image analysis."

About Z3

Z3 employs proprietary registration algorithms for highly accurate automatic alignment of two gel images within a few seconds. In addition, its unique approach for comparing differential expressions improves the accuracy of analysis results. Analyzed images are then displayed using color overlay technology that makes the data visually and intuitively accessible. Further, Z3 provides research oriented tools for data mining and querying, allowing scientists to extract a vast amount of information from 2D gels in general and large scale experiments in particular.

About Compugen

Compugen (www.cgen.com) is a pioneer in the field of computational genomics Computational genomics is the study of deciphering biology from genome sequences using computational analysis.[1], including both DNA and RNA. Computational genomics focuses on understanding the human genome, and more generally the principles of how DNA controls the  and is developing new approaches to computational proteomics. Compugen combines the disciplines of mathematics and computer science with molecular biology molecular biology, scientific study of the molecular basis of life processes, including cellular respiration, excretion, and reproduction. The term molecular biology was coined in 1938 by Warren Weaver, then director of the natural sciences program at the Rockefeller  to improve its understanding of genomics and proteomics. Compugen develops products and services that enable life scientists to significantly enhance and accelerate their research efforts in the discovery of drugs, therapeutics, diagnostics and agricultural products. Compugen provides its corporate solutions to pharmaceutical, biotechnology and other life science organizations such as Pfizer, Human Genome Sciences Human Genome Sciences NASDAQ: HGSI is a biopharmaceutical corporation founded in 1992. Its stated purpose is to "discover, develop, manufacture and market innovative drugs that serve patients with unmet medical needs, with a primary focus on protein and antibody drugs. , Inc. and the U.S. Patent and Trademark Office. In addition, Compugen provides these products and services to molecular biologists and other life scientists through its LabOnWeb.com Web site. Compugen is also commercializing the genes and proteins that it discovers through its Novel Genomics division.

For more information, call +972-3-7658-525.
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Publication:Worldwide Biotech
Geographic Code:7ISRA
Date:Nov 1, 2000
Words:600
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