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Bug banking: a growing business; frozen cells and mail-order microbes are increasingly in demand.


Bug Banking: A Growing Business

Every afternoon, at 2:00 sharp, 10 scientists at the American Type Culture Collection American Type Culture Collection (ATCC) is a private, not-for-profit biological resource center whose mission focuses on the acquisition, authentication, production, preservation, development and distribution of standard reference microorganisms, cell lines and other materials for  (ATCC ATCC American Type Culture Collection, see there ) leave their workstations for an hour to take phone calls from troubled scientists around the world.

"My culture doesn't look healthy," a worried microbiologist says. "Can I substitute minimal essential media for our RPMI RPMI Rapid Prototyping & Manufacturing Institute
RPMI Roswell Park Memorial Institute
RPMI Royal Park Memorial Institute (culture medium) 
 1640 and still get good growth?"

More than 60,000 times per year, these doctoral Dear Abbys share their collective expertise with inquiring microbiologists, virologists and plant pathologists -- all of whom know that if the specialists in Rockville, Md., can't answer their questions, probably nobody can. That's because the Culture Collection scientists are caretakers of the world's largest microbial microbial

pertaining to or emanating from a microbe.


microbial digestion
the breakdown of organic material, especially feedstuffs, by microbial organisms.
 menagerie, featuring nearly 50,000 strains of refrigerated re·frig·er·ate  
tr.v. re·frig·er·at·ed, re·frig·er·at·ing, re·frig·er·ates
1. To cool or chill (a substance).

2. To preserve (food) by chilling.
, frozen or freeze-dried microorganisms.

As part of their job, ATCC technicians periodically thaw a sample of each strain, test it for viability, then put it back to "sleep," ensuring the preservation of a standardized collection of living specimens for scientific investigators. Indeed, ATCC's highly respected hotline is but a spinoff of the collection's primary mission: to preserve and distribute authenticated samples of biological materials, and to serve the research community as both a "Bureau of Standards Bureau of Standards
 since 1988 U.S. National Institute of Standards and Technology (NIST)

Agency of the U.S. Department of Commerce responsible for the standardization of weights and measures, timekeeping, and navigation.
" and a not-for-profit "Sears & Roebuck." Last year, the 63-year-old institution distributed more than 90,000 specimens to researchers in 50 countries.

ATCC's coolers and freezers contain not only bacteria and viruses -- including a number of disease-causing organisms -- but also DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 plasmids and oncogenes oncogenes

1. genes carried by tumor viruses that are directly and solely responsible for the neoplastic transformation of host cells. Many oncogenes function after integration into the DNA of the host cell and some up-regulate normal downstream host cell genes to cause neoplasia.
, fungi and yeast, algae algae (ăl`jē) [plural of Lat. alga=seaweed], a large and diverse group of primarily aquatic plantlike organisms. These organisms were previously classified as a primitive subkingdom of the plant kingdom, the thallophytes (plants that  and protozoans, a variety of seeds and even greenhouse-grown bits of cultured plant tissue.

That menu is considerably broader than its founders ever anticipated, but stranger things may yet find a home in the collection. According to according to
prep.
1. As stated or indicated by; on the authority of: according to historians.

2. In keeping with: according to instructions.

3.
 ATCC's Bobbie Brandon, its freezers someday could become a repository for genetically engineered genetically engineered adjective Recombinant, see there  embryos as well. With the recent U.S. Patent and Trademark Office (PTO PTO
abbr.
1. Parent Teacher Organization

2. or p.t.o. please turn over

3. power takeoff


PTO or pto please turn over

Noun 1.
) decision allowing patents on animals (SN: 4/25/87, p.263), deposits of frozen, patented embryos soon may be required as part of the patent application process, Brandon and PTO officials say. If so, Brandon adds, ATCC will probably start accepting and preserving early embryos of gene-altered animals -- ensuring its continued preeminence as the world's biggest, and perhaps strangest, collection of little living things Living Things may refer to:
  • Life, or things in nature that are alive
  • Living Things (band), a St. Louis musical group
  • Living Things (album) by Matthew Sweet
.

If ATCC were just another cold-storage company specializing in microbes, it might not consider moving into the frozen-animal-embryo business. But in addition to serving as a nonprofit "cell bank," ATCC is one of two internationally recognized patent depositories in the United States United States, officially United States of America, republic (2005 est. pop. 295,734,000), 3,539,227 sq mi (9,166,598 sq km), North America. The United States is the world's third largest country in population and the fourth largest country in area. . (The other is the U.S. Department of Agriculture's Agricultural Research Culture Collection in Peoria, Ill.) As such, ATCC maintains -- in a separate, closely guarded facility -- microorganisms and other genetic material critical to pending patent applications.

Housing roughly 8,000 specimens, the ATCC patent depository is a small part of the Culture Collection's total operation. But recent advances in biotechnology, and a resulting evolution of patent law, have brought the collection's restricted-access iceboxes increasingly into the limelight.

Since U.S. patent law was first enacted in 1790, inventors have enjoyed exclusive rights to their inventions for limited periods, now 17 years. In return, they are required to make public a detailed description of their creation so that others might learn from and improve upon their work. That description, traditionally in writing, accompanies the patent application but is protected from public scrutiny until the patent actually is issued -- sometimes years, or even decades, after the application is first filed.

In the 1940s, as scientists developed patentable processes and products that used specific microorganisms, patent examiners found the written word was sometimes inadequate for describing the microbes involved. So the Patent Office first recommended in 1949, and now often requires, that such patent applications be supplemented with the actual organism.

Scientists are asked to deposit their organism in a "bug" bank such as the ATCC, where it is kept in a high-security state of suspended animation sus·pend·ed animation
n.
A temporary interruption of the vital functions resembling death.
 while awaiting patent approval. Only then is the organism moved into the general collection, where -- in keeping with the mandate of international law -- it is made available to other scientists for at least the next 30 years.

"Most of the people who call us about patent deposits think they have an extremely important patent, and many of them do," Brandon says. "We have people who arrive here from Japan, hand-carrying these packages in dry ice."

It's understandable, she adds, that inventors take such personal interest in their bugs' frozen fates. For example, although U.S. patent deposit rules are slightly different from those of most other countries, patent-pending organisms generally must be deposited on or before the day a patent application is filed. With biotechnology companies Top 100 Biotechnology Companies
The following is a list of the top 100 biotechnology companies ranked by revenue. The first nine companies qualify for the list of the top 50 pharmaceutical companies.
 racing to develop very similar products, a single day's delay may mean the loss of millions of dollars of eventual sales.

Recently, Brandon says, couriers were dispatched to a Washington, D.C., airport to pick up a late-arriving microbial specimen from New Zealand New Zealand (zē`lənd), island country (2005 est. pop. 4,035,000), 104,454 sq mi (270,534 sq km), in the S Pacific Ocean, over 1,000 mi (1,600 km) SE of Australia. The capital is Wellington; the largest city and leading port is Auckland.  that had missed its connection in Los Angeles Los Angeles (lôs ăn`jələs, lŏs, ăn`jəlēz'), city (1990 pop. 3,485,398), seat of Los Angeles co., S Calif.; inc. 1850. . Since the bug's patent application had already been filed in Washington that day, the couriers rushed the specimen to Rockville, where it was logged in and deposited at 11 p.m. "We made it with an hour to spare," Brandon says with a smile.

Despite the high-stakes atmosphere surrounding the patent depository, most of the ATCC facility resembles an ordinary microbiological laboratory. There is the constant howl of fans pulling air through filtered ducts; the warm smell of freshly cooked growth media; the sloshing of shaker racks keeping finicky fin·ick·y  
adj. fin·ick·i·er, fin·ick·i·est
Insisting capriciously on getting just what one wants; difficult to please; fastidious: a finicky eater.
 bacteria suspended in their favorite liquid broths.

As in many laboratories, glossies of photogenic photogenic /pho·to·gen·ic/ (-jen´ik)
1. produced by light, as photogenic epilepsy.

2. producing or emitting light.


pho·to·gen·ic
adj.
1.
 bacteria decorate walls, and one door features a popular Gary Larsen
For the cartoonist, see Gary Larson
Gary Larsen (born March 13, 1942) in Fargo, North Dakota was a defensive tackle in the NFL and played college football at Concordia College, Moorhead, Minnesota.
 cartoon depicting pornographic amoebas with little black bars masking their vacuole-pocked "faces."

Many of the lab's 100 or so scientists are essentially "nutritionists," experimenting with new growth media that may stimulate better microbial growth. The facility makes more than 2,000 types of media -- in a rainbow of colors -- many of them custom-designed to meet the dietary needs of uniquely engineered organisms. At times it has taken months or even years to come up with the ideal medium to support a new organism, Brandon says.

In addition to their search for the perfect microbial meal, scientists constantly face the challenge of discovering how best to preserve a specimen over long periods of time. Survival is not the only criterion; scientists want to minimize the possibility of mutation as well. Depending on the nature of the specimen, it may preserve best when freeze-dried and refrigerated at 5[deg.]C, frozen at --60[deg.]C to --80[deg.]C, or dunked in liquid nitrogen Noun 1. liquid nitrogen - nitrogen in a liquid state
atomic number 7, N, nitrogen - a common nonmetallic element that is normally a colorless odorless tasteless inert diatomic gas; constitutes 78 percent of the atmosphere by volume; a constituent of all living
 at --196[deg.]C.

So far, ATCC scientists are not preserving engineered embryos, Brandon says. Only one patent has been granted to a gene-altered animal in the United States (SN: 4/16/88, p.244). And although its creators -- two Harvard University Harvard University, mainly at Cambridge, Mass., including Harvard College, the oldest American college. Harvard College


Harvard College, originally for men, was founded in 1636 with a grant from the General Court of the Massachusetts Bay Colony.
 scientists -- cite two ATCC-registered microorganisms as important to the genealtered animal's creation, the Patent Office did not require any new deposits before issuing that patent.

If the Patent Office starts asking for deposits, Brandon says, frozen, early embryos probably will be the deposit of choice -- in part because the technology for freezing embryos already is well established. But nobody knows if the Patent Office will require deposits for any of the genetically engineered animals expected to be patented -- or, if so, what kind of deposit it may deem most appropriate.

Under current rules, says PTO Supervisory Patent Examiner Thomas Wiseman, applicants generally must deposit their patent-pending organism if it is new and unavailable, or if its taxonomic description is incomplete -- conditions that foreseeably will be true for some of the engineered animals under development. In addition, he says, patent officers generally require a deposit if they think a scientist skilled in the art would have to perform "undue experimentation" to duplicate the original invention. Wiseman defines this as "the type of experimentation that is akin to invention."

According to PTO Commissioner Charles Van Horn, new rules currently being formulated should help clarify deposit requirements. But those rules will be only "procedural guidelines," and for the most part will not address what inventors must deposit. "We're not going to try to restrict or define what it is that one has to deposit," he says. "That will have to be decided on a case-by-case basis."

Most important, Van Horn notes, a deposit is supposed to enable other scientists to duplicate the original work, or to show the "best mode" of producing the new creation. So any decision to require animal cell deposits would depend in part on how useful such deposits proved to be.

"The deposit has to be more than a storehouse of a finite number of samples," he says, adding that if the stored specimen is not self-replicating it won't be particularly useful to anybody. He predicts the rules will continue to evolve as cell preservation and cloning technologies improve.

If the Patent Office does begin to require some animal cell deposits, those samples are bound to represent but a small part of the Culture Collection's workload, Brandon says. "The patent depository is the smallest part of our operation, even if it seems the most critical."

And although animal patents remain controversial in scientific, bioethical and congressional circles, the heated debate is not likely to penetrate the Rockville coolers. For even the oddest engineered embryo loses much of its notoriety once dipped in liquid nitrogen and stored on a shelf. Another little piece of the biotic biotic /bi·ot·ic/ (bi-ot´ik)
1. pertaining to life or living matter.

2. pertaining to the biota.


bi·ot·ic
adj.
1. Relating to life or living organisms.
 puzzle, it will be given a number, catalogued and shown to its room. There it will take its place with the thousands of other bits of accumulated life that have gradually filled the collection's shelves since 1925.
COPYRIGHT 1988 Science Service, Inc.
No portion of this article can be reproduced without the express written permission from the copyright holder.
Copyright 1988, Gale Group. All rights reserved. Gale Group is a Thomson Corporation Company.

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Author:Weiss, Rick
Publication:Science News
Date:Jun 25, 1988
Words:1615
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