Articles from Biophysical Journal (July 1, 2006)

Title	Author	Type	Words
A Computational Framework for the Topological Analysis and Targeted Disruption of Signal Transduction Networks	Madhukar S Dasika and Anthony Burgard and Costas D Maranas		6077
A Model for the Pulsatile Secretion of Gonadotropin-Releasing Hormone from Synchronized Hypothalamic Neurons	Anmar Khadra and Yue-Xian Li		1202
Autologous Morphogen Gradients by Subtle Interstitial Flow and Matrix Interactions	Mark E Fleury and Kendrick C Boardman and Melody A Swartz		3730
Clustering of Cyclic-Nucleotide-Gated Channels in Olfactory Cilia	Richard J Flannery and Donald A French and Steven J Kleene		4806
Controlling the Protein Dynamical Transition with Sugar-Based Bioprotectant Matrices: A Neutron Scattering Study	E Cornicchi and M Marconi and G Onori and A Paciaroni		4273
Diffusional Anisotropy in Collagenous Tissues: Fluorescence Imaging of Continuous Point Photobleaching	Holly A Leddy and Mansoor A Haider and Farshid Guilak		2654
Effects of Denaturants on the Dynamics of Loop Formation in Polypeptides	Marco Buscaglia and Lisa J Lapidus and William A Eaton and James Hofrichter		5740
Effects of Intracellular and Extracellular Concentrations of Ca^sup 2+^, K+, and Cl- on the Na+-Dependent Mg^sup 2+^ Efflux in Rat Ventricular Myocytes	Michiko Tashiro and Pulat Tursun and Takefumi Miyazaki and Masaru Watanabe and Masato Konishi		6081
Electrostatic Energy Calculation on the pH-Induced Conformational Change of Influenza Virus Hemagglutinin	Ho Sup Choi and June Huh and Won Ho Jo		2809
Ensemble-Based Convergence Analysis of Biomolecular Trajectories	Edward Lyman and Daniel M Zuckerman		1042
Evidence for Lipid/Cholesterol Ordering in Model Lipid Membranes	Canay Ege and Maria K Ratajczak and Jaroslaw Majewski and Kristian Kjaer and Ka Yee C Lee		463
First Steps of Retinal Photoisomerization in Proteorhodopsin	Martin O Lenz and Robert Huber and Bernhard Schmidt and Peter Gilch and Et al		4126
First-Principles Transversal DNA Conductance Deconstructed	X-G Zhang and Predrag S Krstic and Radomir Zikic and Jack C Wells and Miguel Fuentes-Cabrera		578
Ground and Excited States of Retinal Schiff Base Chromophores by Multiconfigurational Perturbation Theory	Sivakumar Sekharan and Oliver Weingart and Volker Buss		1319
In Vivo Quantitative Studies of Dynamic Intracellular Processes Using Fluorescence Correlation Spectroscopy	Zifu Wang and Jagesh V Shah and Michael W Berns and Don W Cleveland		4149
Increasing the Net Charge and Decreasing the Hydrophobicity of Bovine Carbonic Anhydrase Decreases the Rate of Denaturation with Sodium Dodecyl Sulfate	Katherine L Gudiksen and Irina Gitlin and Demetri T Moustakas and George M Whitesides		6203
Interplay of Ryanodine Receptor Distribution and Calcium Dynamics	Leighton T Izu and Shawn A Means and John N Shadid and Ye Chen-Izu and C William Balke		9882
Kinetic Definition of Protein Folding Transition State Ensembles and Reaction Coordinates	Christopher D Snow and Young Min Rhee and Vijay S Pande		6075
Langevin Dynamics Simulations of Genome Packing in Bacteriophage	Christopher Forrey and M Muthukumar		466
Lateral Diffusion Anisotropy and Membrane Lipid/Skeleton Interaction in Outer Hair Cells	J Boutet de Monvel and W E Brownell and M Ulfendahl		8603
Probabilistic Modeling of Rosette Formation	Mian Long and Juan Chen and Ning Jiang and Periasamy Selvaraj and Et al		6000
Pulsed Laser Microbeam-Induced Cell Lysis: Time-Resolved Imaging and Analysis of Hydrodynamic Effects	Kaustubh R Rau and Pedro A Quinto-Su and Amy N Hellman and Vasan Venugopalan		7245
Solid-State NMR Investigation of the Membrane-Disrupting Mechanism of Antimicrobial Peptides MSI-78 and MSI-594 Derived from Magainin 2 and Melittin	Ayyalusamy Ramamoorthy and Sathiah Thennarasu and Dong-Kuk Lee and Anmin Tan and Lee Maloy		5019
Structural Comparison of the Two Alternative Transition States for Folding of TI I27	Christian D Geierhaas and Robert B Best and Emanuele Paci and Michele Vendruscolo and Jane Clarke		6811
Three-Dimensional Distribution of Ryanodine Receptor Clusters in Cardiac Myocytes	Ye Chen-Izu and Stacey L McCulle and Chris W Ward and Christian Soeller and Et al		7219
Triggering and Visualizing the Aggregation and Fusion of Lipid Membranes in Microfluidic Chambers	Daniel J Estes and Santiago R Lopez and A Oveta Fuller and Michael Mayer		814