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Another face of entropy: particles self-organize to make room for randomness.


Particles self-organize to make room for randomness

There's a flip side Flip side

In the context of general equities, opposite side to a proposition or position (buy, if sell is the proposition and vice versa).
 to the doom and gloom doom and gloom
n.
Gloom and doom.



doom-and-gloom adj.
 of entropy. The steady march to disorder is not all degradation and the ultimate, bland sameness found so depressing by thinkers from philosopher Bertrand Russell to novelist Thomas Pynchon.

Entropy measures the amount of disorder in any patch of the universe, be it the dust, gas, stars, and planets of a galaxy, a belching belching

see eructation.
 steam engine, or the cells of a living organism. The laws of thermodynamics The laws of thermodynamics, in principle, describe the specifics for the transport of heat and work in thermodynamic processes. Since their conception, however, these laws have become some of the most important in all of physics and other branches of science connected to  require that entropy must always increase. Rudolf Clausius, the 19th century German physicist, imagined that the relentless increase of entropy would ultimately degrade the universe to a disordered, stagnant confusion--a fate he called the heat-death.

As Russell sadly put it, "all the labors of the ages, all the devotion, all the inspiration, all the noonday brightness of human genius, are destined des·tine  
tr.v. des·tined, des·tin·ing, des·tines
1. To determine beforehand; preordain: a foolish scheme destined to fail; a film destined to become a classic.

2.
 to extinction.' And, Pynchon's character Callisto in the story "Entropy, bemoaned a heat-death of culture as well, "in which ideas, like heat-energy, would no longer be transferred."

Scientists, however, are discovering with apparent glee how often the road to disorder is paved with a little useful order. "Even though it's been known for a long time that entropy can produce order, it's still not fully realized how general that phenomenon is and how rich in potential," says Seth Fraden of Brandeis University in Waltham, Mass.

That potential holds in particular for a submerged realm of objects that are much bigger than atoms but too small to be seen without a microscope. There, remarkable feats of self-assembly take place. Such processes can create intricate molecular structures that, despite appearances, represent an increase of entropy over their ingredients.

It's a realm of special importance to humankind because it encompasses the contents of biological cells. In optics, it's the arena where researchers strive to make the photonic crystals that have been touted as the silicon of future, light-based computing. It's also where scientists grapple with problems of protein crystallization--a vital step toward understanding the functions of many new-found genes.

Although scientists have known since at least the 1940s that entropy can act as an unseen hand to create order, only in the last few years have they begun to suspect--and to demonstrate--how elaborate its handiwork can be. They have found that simply blending microscopic particles of different shapes or sizes in liquids sometimes causes crystalline structures of remarkable complexity to appear. The aimless interactions of the particles creates these structures, even while maximizing entropy as thermodynamics thermodynamics, branch of science concerned with the nature of heat and its conversion to mechanical, electric, and chemical energy. Historically, it grew out of efforts to construct more efficient heat engines—devices for extracting useful work from expanding  demands.

In entropy's most virtuoso laboratory performance to date, Fraden and his colleagues at Brandeis University blended plastic spheres and rods in water. The spheres, each no larger than a micron in diameter, were combined with micron-long rods--actually genetically engineered genetically engineered adjective Recombinant, see there  viruses--about 10 nanometers in diameter.

In experiments reported in the May 28 Nature, the suspended mixtures spontaneously solidified into two types of highly ordered, complex, permanent structures. One is a cake in which layers of vertical rods alternate with a thin frosting frosting

the slight graying of the haircoat around the face, particularly muzzle, in dogs with aging and as a regular feature of some breeds such as the Belgian shepherd dog.
 of balls--a stacked, or lamellar lamellar /la·mel·lar/ (lah-mel´ar)
1. pertaining to or resembling lamellae.

2. lamellated (1).


lamellar

pertaining to or emanating from lamella.
, arrangement. This pattern reflects the arrangement of phospholipids in cell membranes and the alignment of soap molecules in the surfaces of bubbles.

The other structure, known as columnar, features a regular, crystal lattice of vertical columns of clustered spheres embedded in a horizontal sea of rods all pointing roughly the same way.

Polymers used as glues and soaps commonly take on such structure, a phenomenon that materials scientists have long attributed to an incompatibility between the ends of the polymer molecules. The rods used by Fraden and his colleagues, however, don't have antagonistic ends.

Seeing a glue-like or soap-like structure built purely by entropic forces was "shocking," he says. Other, less durable patterns also emerged, including ropes with lamellar order and chains of rod packets interspersed with spheres.

A new, unpublished study by Arjun Yodh yodh  
n.
The tenth letter of the Hebrew alphabet. See Table at alphabet.



[Hebrew yôd, of Phoenician origin; see yd in Semitic roots.]

Noun 1.
 and his colleagues at the University of Pennsylvania (body, education) University of Pennsylvania - The home of ENIAC and Machiavelli.

http://upenn.edu/.

Address: Philadelphia, PA, USA.
 in Philadelphia may cast light on how such elaborate structures form.

Since the early 1990s, Yodh's lab has been probing how the organizing influences of entropy arise, how strong they are, and how to control them. In a series of papers dating to early 1994, the researchers have described mixing small beads with large spheres--typically in proportions of thousands of small spheres less than 100 nanometers in diameter for each large sphere, which is 500 or so nanometers across. As the scientists watch, the bigger ones are pushed by their smaller neighbors against the hard, flat walls of containers, where they assemble into crystals.

In other experiments detailed in the January 12 Physical Revenue Letters, the team observed big balls being forced against the most curved sections of the inner walls of pear-shaped, rigid vessels.

A few simple principles seem to explain where the large spheres go, according to Yodh and other scientists. First, the entropy of the small balls reaches its peak when they have the most room in which to move. Second, the large balls hog more room than just the actual volume that they occupy. Both large balls and walls, by their very presence, create thin regions along their surfaces where some part of each small ball cannot go.

For instance, a small ball's center must stay at least one small-ball radius away from those surfaces. However, those restrictive regions can overlap and cancel each other out where a big ball and a wall or another ball touch. The overlap is even greater at concave walls. By herding the big balls against walls or each other via random collisions, the small balls regain some unfettered volume and raise their entropy.

Of course, the entropy of the big balls drops as they form neat clusters, but calculations show that the overall entropy still goes up, the experimenters say.

In essence, entropy creates an attractive force that is also called a depletion, or excluded-volume, force. The strength of this force, first predicted in 1958 by Japanese physicists Sho Asakura and Fumio Oosawa of Nagoya University, depends on the ratio of small to large spheres and their relative sizes. John Y. Walz of Yale University, a researcher who has measured the minuscule force, describes it as "less than the weight of a single red blood cell red blood cell: see blood.  in water."

In Yodh's new study, the experimenters again mixed small and large balls. They then tracked the separation of pairs of large spheres to determine the force between them. John Crocker reported the new data in March at a meeting of the American Physical Society The American Physical Society was founded in 1899 and is the world's second largest organization of physicists. The Society publishes more than a dozen science journals, including the world renowned Physical Review and Physical Review Letters, and organizes more than twenty science  in Los Angeles.

At modest concentrations of small spheres, the force was attractive, as expected, decreasing with distance between the spheres. But, at high concentrations of little balls, the force flip-flopped repeatedly, changing from attractive at the closest separation, to repulsive further out, then back to attractive, and so on.

Theorists had predicted this effect, but Yodh's team is the first to measure it between two spheres. Two years ago, Walz and Amber Sharma, also of Yale, saw the same effect while measuring the force between a sphere and a wall. Due to alternating attraction and repulsion repulsion /re·pul·sion/ (re-pul´shun)
1. the act of driving apart or away; a force that tends to drive two bodies apart.

2.
, large spheres could become trapped in layers at successive distances from each other.

These entropic forces become significant at scales of, roughly, a few tens of nanometers to a couple of microns. For entropic ordering to take place, particles must constantly jostle each other and be light enough to be randomly agitated ag·i·tate  
v. ag·i·tat·ed, ag·i·tat·ing, ag·i·tates

v.tr.
1. To cause to move with violence or sudden force.

2.
 by fluid molecules, making gravity negligible. Proteins, DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
, and other macromolecules Macromolecules
A large molecule composed of thousands of atoms.

Mentioned in: Gene Therapy

macromolecules
 that crowd a cell's cytoplasm cytoplasm: see protoplasm.
cytoplasm

Portion of a eukaryotic cell outside the nucleus. The cytoplasm contains all the organelles (see eukaryote).
 fit the bill, some researchers say.

Most biology researchers have paid no heed to entropic forces because traditional biochemistry focuses on reactions in dilute solutions, away from the cellular "background," says Allen P. Minton, a physical chemist at the National Institutes of Health in Bethesda, Md.

In the late 1970s, however, he and his colleague Philip D. Ross showed how excluded-volume forces could account for an unexplained clumping of sickle-cell hemoglobin in the presence of other proteins that play the role of the small spheres in entropy experiments.

A few years later, Minton and Steven B. Zimmerman, also at NIH "Not invented here." See digispeak.

NIH - The United States National Institutes of Health.
, tied entropic forces to the clustering of DNA in cells lacking a nucleus. Currently, Minton is probing the role such forces might play in the binding of proteins to cell membranes and in the assembly of the cell's structural scaffold of protein filaments known as microtubules Microtubules
Slender, elongated anatomical channels in worms.

Mentioned in: Antihelminthic Drugs
.

Working with Yodh's group, Dennis E. Discher, a biophysicist bi·o·phys·ics  
n. (used with a sing. verb)
The science that deals with the application of physics to biological processes and phenomena.



bi
 at the University of Pennsylvania, is examining whether depletion forces are partly responsible for clumping of blood cells blood cells,
n.pl the formed elements of the blood, including red cells (erythrocytes), white cells (leukocytes), and platelets (thrombocytes).


blood cells

See erythrocyte and leukocyte. Platelets are classed separately.
 in the body when circulation is blocked. Also, extending Yodh's work to thinner-walled containers, much more like actual cells, Discher hopes to measure the force that can be exerted by a large sphere pushed outward by depletion forces. He speculates that it may be such entropic forces that eject the nucleus from red blood cells Red blood cells
Cells that carry hemoglobin (the molecule that transports oxygen) and help remove wastes from tissues throughout the body.

Mentioned in: Bone Marrow Transplantation

red blood cells 
 before they enter the bloodstream.

"There is a lot of evidence that [entropic forces are] a very widespread and important phenomenon in biological systems," says Minton, a self-proclaimed missionary for the idea. It may be catching on, he adds, given the rising number of invitations he has been receiving to speak and write review papers on "macromolecular mac·ro·mol·e·cule  
n.
A very large molecule, such as a polymer or protein, consisting of many smaller structural units linked together. Also called supermolecule.
 crowding," as the phenomenon is known in biology.

In several ways, industry has already recognized the utility of entropic ordering--and also dealt with its down side. In the 1940s, Nobel laureate Lars Onsager predicted a phase transition due to entropic forces. Thirty years later, chemists achieved that phase change among polymer molecules, inducing them to bind together to form ultra-strong fibers such as Kevlar.

In the 1980s, unexpected findings by paint makers fueled a resurgence of interest in entropic ordering. Polymers that had been added to paint to make it flow smoothly were instead causing clumping. The culprit: excluded-volume forces.

The growing appreciation of entropy's penchant for order has unleashed a renewed drive to put it to practical use. Yodh and physicist David Pine of the University of California, Santa Barbara History
The predecessor to UCSB, Santa Barbara State College, focused on teacher training, industrial arts, home economics, and foreign languages. Intense lobbying by an interest group in the City of Santa Barbara led by Thomas Storke and Pearl Chase persuaded the State
 are each trying to exploit entropy to make photonic crystals, which are expected to lead to better microlasers and possibly all-optical computer circuits that are smaller, faster, and create less heat than conventional electronics (SN: 11/15/97, p. 310; 11/16/96, p. 309).

Each is basing his research on their joint discovery that by cutting grooves in the walls of the container to which the spheres adhere, scientists can direct where entropic forces herd large spheres. That finding was detailed in a Sept. 19, 1996 Nature paper with Anthony D. Dinsmore, now at the Naval Research Laboratory Noun 1. Naval Research Laboratory - the United States Navy's defense laboratory that conducts basic and applied research for the Navy in a variety of scientific and technical disciplines
NRL
 in Washington, D.C.

Now they plan to use the entropy-ordered spheres as seeds for photonic crystals designed so that the walls of their inner pores reflect light in all directions.

Large photonic crystals suitable for manipulating long wavelengths of light, such as microwaves, already exist. Yodh and Pine, however, each intend to create crystals that can handle infrared or visible light, which promise to be far more useful but are difficult to make because they require such fine internal structure.

Nonetheless, Pine believes he is only months away from success. He is using grooves to align spheres of oil suspended in a fluid. He next fills the space around the globules with ceramic materials that tend to scatter light in all directions. When the ceramic hardens, Pine clears out the liquids to leave the desired crystal behind.

Yodh is also using grooves, but he applies beads of similar light-dispersing materials directly to create the crystal. It's a tough challenge because the material is so heavy that gravity enters the equation.

Success for his group might depend on escaping gravity, which is what the researchers intend to do. NASA NASA: see National Aeronautics and Space Administration.
NASA
 in full National Aeronautics and Space Administration

Independent U.S.
 has awarded them a grant for microgravity mi·cro·grav·i·ty  
n.
1. An environment in which there is very little net gravitational force, as of a free-falling object, an orbit, or interstellar space.

2.
 experiments on the space shuttle, although a date has not yet been set, Yodh says.

A better understanding of entropic forces might also transform the "black art" of protein crystallization Crystallization

The formation of a solid from a solution, melt, vapor, or a different solid phase. Crystallization from solution is an important industrial operation because of the large number of materials marketed as crystalline particles.
 into a reliable process with a firmer scientific footing, Fraden says.

He pledges to devote the next couple of years to that task. He predicts that as scientists attempt to learn what the genes described by the Human Genome Project do, they will reach a bottleneck because their ability to crystallize proteins is limited. Crystals are required to determine the three-dimensional structure of proteins, which give clues to their function.

In the Sept. 26, 1997 SCIENCE, researchers reported computer simulations showing that entropic forces could allow proteins to crystallize readily. In their models, adding polymer particles to a protein suspension induces the formation of dense droplets that act as seeds for crystal formation, say Daan Frenkel and Pieter Rein ten Wolde of the FOM FOM Figure Of Merit
FOM Fundamenteel Onderzoek der Materie (Dutch organization for fundamental research of matter)
FOM Formula One Management (racing)
FOM Field Operations Manual
 Institute for Atomic and Molecular Physics in Amsterdam.

Also swept up in the revival is Alice P. Gast at Stanford University, whose doctoral thesis 13 years ago quantified the entropy-induced clumping that baffled paint manufacturers. After turning her attention to other things, she is now returning to entropic forces--this time as a way to grow two-dimensional protein crystals.

Experiments on entropy-driven ordering have also caught the eye of physicist Adam J. Simon at Merck & Co., a pharmaceutical firm in West Point, Pa. "If these entropic or depletion forces are playing a role in cellular processes, then there is potential application in the field of drug delivery," he says.

Although excited by new findings and applications, even scientists who have studied depletion forces for years admit that entropy's orderly alter ego A doctrine used by the courts to ignore the corporate status of a group of stockholders, officers, and directors of a corporation in reference to their limited liability so that they may be held personally liable for their actions when they have acted fraudulently or unjustly or when  can befuddle be·fud·dle  
tr.v. be·fud·dled, be·fud·dling, be·fud·dles
1. To confuse; perplex. See Synonyms at confuse.

2. To stupefy with or as if with alcoholic drink.

Verb 1.
 their intuition. But once you have seen entropy tidy up, the researchers say, you start noticing its touches everywhere.
COPYRIGHT 1998 Science Service, Inc.
No portion of this article can be reproduced without the express written permission from the copyright holder.
Copyright 1998, Gale Group. All rights reserved. Gale Group is a Thomson Corporation Company.

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Author:Weiss, Peter Ulrich
Publication:Science News
Date:Aug 15, 1998
Words:2260
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