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An allometric smoothing function to describe the relation between otolith and somatic growth over the lifespan of walleye pollock (Theragra chalcogramma).


Abstract--We propose a new equation to describe the relation between otolith otolith /oto·lith/ (o´to-lith) statolith.

o·to·lith
n.
1. Any of numerous minute calcareous particles found in the inner ear of certain lower vertebrates and in the statocysts of many
 length (OL) and somatic somatic /so·mat·ic/ (so-mat´ik)
1. pertaining to or characteristic of the soma or body.

2. pertaining to the body wall in contrast to the viscera.


so·mat·ic
adj.
 length (fork length [FL]) offish off·ish  
adj.
Inclined to be distant and reserved; aloof.



offish·ly adv.

off
 for the entire lifespan of the fish. The equation was developed by applying a mathematical smoothing method based on an allometric al·lom·e·try  
n.
The study of the change in proportion of various parts of an organism as a consequence of growth.



al
 equation with a constant term for walleye walleye, in medicine
walleye: see strabismus.
walleye, in zoology
walleye or walleyed pike: see perch.
 pollock (Theragra chalcogramma)--a species that shows an extended longevity (>20 years). The most appropriate equation for defining the relation between OL and FL was a four-phase allometric smoothing function with three inflection inflection, in grammar. In many languages, words or parts of words are arranged in formally similar sets consisting of a root, or base, and various affixes. Thus walking, walks, walker have in common the root walk and the affixes -ing, -s, and  points. The inflection points correspond to the timing of settlement of walleye pollock, changes in sexual maturity, and direction of otolith growth. Allometrie smoothing functions describing the relation between short otolith radius and FL, long otolith radius and FL, and FL and body weight were also developed. The proposed allometric smoothing functions cover the entire lifespan of walleye pollock. We term these equations "allometric smoothing functions for otolith and somatic growth over the lifespan of walleye pollock."

**********

The power function y = [ax.sup.b], used as an allometric equation (Huxley, 1924), is a useful tool for growth analysis of organisms. Equations that describe the relation between fish otolith length (OL: distance between the tip of rostrum rostrum /ros·trum/ (ros´trum) pl. ros´tra, rostrums   [L.] a beak-shaped process.

ros·trum
n. pl. ros·trums or ros·tra
A beaklike or snoutlike projection.
 and tip of postrostrum) and somatic length (e.g., fork length; FL: distance between the tip of head and fork of tail fin) have been widely used in fishery biology and ecological studies to estimate somatic length at younger ages with back-calculation methods. These methods are based on linear equations, log-transformed allometric equations, and quadratic quadratic, mathematical expression of the second degree in one or more unknowns (see polynomial). The general quadratic in one unknown has the form ax2+bx+c, where a, b, and c are constants and x is the variable.  equations (reviewed by Francis, 1990). However, these previous equations do not adequately reflect the complex changes in growth over the lifetime of a fish, especially for long-lived species.

Walleye pollock (Theragra chalcogramma (Pallas)) is the most abundant fish in the Bering Sea Bering Sea, c.878,000 sq mi (2,274,020 sq km), northward extension of the Pacific Ocean between Siberia and Alaska. It is screened from the Pacific proper by the Aleutian Islands. The Bering Strait connects it with the Arctic Ocean. , constitutes the majority of the commercial catches from this area (Wespestad, 1993), and is a long-lived species. The oldest recorded age for this species is 28 years (McFarlane and Beamish, 1990). Juvenile walleye pollock serve as a substantial prey source for older walleye pollock, other fish species, marine mammals, and sea birds. Thus, the year-class strength and population dynamics Population dynamics is the study of marginal and long-term changes in the numbers, individual weights and age composition of individuals in one or several populations, and biological and environmental processes influencing those changes.  of walleye pollock have a significant influence on the entire ecosystem (Springer, 1992; Hunt et al., 2002). Estimations of somatic length and growth analyses at particular ages or life stages are imperative for fishery biology and ecological studies of walleye pollock.

In studies of the growth of walleye pollock, the equation that describes the relation between OL and somatic length (i.e., fork length) (referred to as the "OL-FL equation" in this article) is required in order to reconstruct the size of walleye pollock from otoliths collected from the stomachs of predators. Frost and Lowry (1981) applied two linear equations, with an inflection point Inflection Point

An event that changes the way we think and act.
-Andy Grove, Founder of Intel.

Notes:
For example, the fall of the Berlin Wall was an inflection point in global politics and the commercialization of the Internet was an inflection point in technology.
 at 10 mm OL, corresponding to 220 mm FL, in a total size range of 60-570 mm FL. Nishimura and Yamada (1988) applied the log-transformed allometric equation of the three linear equations with log-transformed OL and total length (TL: distance between the tip of head and tip of tail fin; 4.6-680 mm) to data for three stages: larval stage larval stage - Describes a period of monomaniacal concentration on coding apparently passed through by all fledgling hackers. Common symptoms include the perpetration of more than one 36-hour hacking run in a given week; neglect of all other activities including usual basics like  (4.6-14.0 mm TL), juvenile stage (11-96 mm TL), and young-adult stage (88-680 mm TL). Zeppelin zeppelin

Rigid airship of a type designed by the German builder Ferdinand, Graf (count) von Zeppelin (1838–1917). It was a cigar-shaped, trussed, and covered frame supported by internal gas cells, below which hung two external cars with an engine geared to two
 et al. (2004) adapted a quadratic equation quadratic equation

Algebraic equation of particular importance in optimization. A more descriptive name is second-degree polynomial equation. Its standard form is ax2 + bx + c
 for a fish size range of 49-530 mm FL. These previous equations allowed researchers to characterize the growth patterns of walleye pollock by regression analysis In statistics, a mathematical method of modeling the relationships among three or more variables. It is used to predict the value of one variable given the values of the others. For example, a model might estimate sales based on age and gender.  (the least-squares method), but they have several shortcomings because somatic length is not estimated across the whole life span of the fish. First, the equations, each of which represents a different life stage, do not facilitate comprehension of the continuity of each life stage. The equations are fitted to each segment of the data separately by inflection points that are derived from empirical data or visually from the scatter plots. Second, the quadratic equation has limitation in the shape of its curve which does not show the inflection point. The complex growth patterns are not adequately reflected in the equation. Third, the least-squares method does not allow for the incorporation of increasing variance with increasing fish length. When the sample distribution is biased, the calculated equation is largely influenced by the range of fish lengths from the largest number of samples. Fourth, previous OL-FL equations were not considered objectively in the selection of an adequate equation. No attempt has been made to apply information criteria The introduction to this article provides insufficient context for those unfamiliar with the subject matter.
Please help [ improve the introduction] to meet Wikipedia's layout standards. You can discuss the issue on the talk page.
 such as Akaike's information criterion There are a number of statistics that can act as an information criterion. They include:
  • Akaike's information criterion
  • the Bayesian information criterion, also known as the Schwarz information criterion
  • Hannan-Quinn information criterion
 (AIC: Akaike, 1974), which is an operational way of trading off the complexity of an estimated equation against how well the equation fits the data.

To overcome these problems, we developed a new OL-FL equation for the whole lifespan of walleye pollock using a proposed allometric smoothing function to describe the relation between OL and FL. We also derived three distinctive allometric smoothing functions to establish the relationships between the short otolith radius (SOR: from core to the tip of rostrum) and FL, between the long otolith radius (LOR LOR Letter Of Reprimand (military)
LoR Lord of the Rings (J.R.R. Tolkien)
LOR Learning Object Repository
LOR Linux.Org.
: from core to the tip of postrostrum) and FL, and between the FL and body weight (BW: wet body weight).

Materials and methods

General equations

The general equations in this analysis are linear equations (Eqs. 1 and 2), an allometric equation (Eq. 3), and an allometric equation with a constant term (Eq. 4):

y = ax (1)

y = ax + c (2)

y = [ax.sup.b] (3)

y = [ax.sup.b] + c (4)

where x = the independent variable;

y = the dependent variable; and

a, b, and c = parameters.

[FIGURE 1 OMITTED]

Allometric smoothing function

A new OL-FL equation was developed by using a mathematical smoothing method based on an allometric equation with a constant term. The assumption of the allometric smoothing function was to have a common tangent tangent, in mathematics.

1 In geometry, the tangent to a circle or sphere is a straight line that intersects the circle or sphere in one and only one point.
 at the inflection point to reflect the variable allometric growth smoothly. A composite of two or more allometric smoothing functions was defined as follows:

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII ASCII or American Standard Code for Information Interchange, a set of codes used to represent letters, numbers, a few symbols, and control characters. Originally designed for teletype operations, it has found wide application in computers. ], (5)

where [[delta].sub.i](x) = switch function;

[q.sub.i] = a value of x on the inflection point, here [q.sub.0]=0;

[f.sub.i](x) = a number i of function; and

[a.sub.i], [b.sub.i], and [c.sub.i] = parameters for the function of i.

[f.sub.i](x) is validated between the inflection points ([q.sub.i-1][less than or equal to] x [less than or equal to] [q.sub.i]) which depend on the [[delta]sub.i](x).

We assumed that for the smooth integration of [f.sub.i](x) and [f.sub.i+1](x) (the function on the next order of i), both functions must pass through the inflection point (x, y) = ([q.sub.i], [f.sub.i]([q.sub.i]) = [f.sub.i+1]([q.sub.i])) and have a common tangent at this point (Fig. 1). To satisfy the above conditions, the following two equations must be equal.

[f.sub.i]([q.sub.i]) = [f.sub.i+1]([q.sub.i]) (6)

[f'.sub.i]([q.sub.i]) = [f'.sub.i+1]([q.sub.i]). (7)

When Equation 5 is substituted for Equations 6 and 7, the following equations are obtained:

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII] (8)

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII]. (9)

Solving Equations 8 and 9 simultaneously yields

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII] (10)

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII]. (11)

The functions of [f.sub.i](x) and [f.sub.i+1](x) can be smoothly connected at the inflection point if Equations 10 and 11 are equal. The formula of the allometric smoothing function y is shown as follows:

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII]. (12)

Fitting the OL-FL equations

The allometric smoothing function (Eq. 12) is fitted by using the maximum likelihood method. In the fitting, the sample distribution around the dependent variable was assumed to have a normal distribution. The estimated standard deviation (SD) for the dependent variable was used to calculate the weighted likelihood. The fitting procedure is shown as follows (see Appendix Table):

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII], (13)

where [[??]L.sub.j] = the calculated FL for individual j;

[OL.sub.j] = the measured OL of individual j; and

[[epsilon].sub.j] = the error for individual j.

Equation 13 is validated between the inflection points ([q.sub.i-1] [less than or equal to] [OL.sub.j] [less than or equal to] [q.sub.i]).

The distribution of [[epsilon].sub.j] is assumed to have a normal distribution [MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII]:

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII], (14)

where [MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII] = the estimated SD of the FL of individual j; and

d, e, and f = parameters.

The variable [MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII] is assumed to fit the general equations (Eqs. 3 or4).

To fit [[??]L.sub.j] to the general equations (Eqs. 1-3), the following procedures are used. For Equation 1, the parameters in Equation 13 are fixed as [b.sub.i] = 1 and [c.sub.i] = 0; for Equation 2, the parameter is fixed as [b.sub.i] = 1; and for Equation 3, the parameter is fixed as [c.sub.i] = 0.

A likelihood of measured FL is calculated by the following equations:

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII] (15)

and

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII], (16)

where [L.sub.j] = likelihood (the probability density probability density
n. Statistics In both senses also called probability distribution.
1. A function whose integral over a given interval gives the probability that the values of a random variable will fall within the interval.
) of [FL.sub.j];

[FL.sub.j] = the measured FL of individual j; and

LL = a log-likelihood.

LL is maximized by changing the parameters.

Determination of the OL-FL equations

The equation with the minimum AIC was selected:

AIC = -2MLL MLL - Medium-Level Language.

Sometimes used half-jokingly to describe C, alluding to its "structured-assembler" image.
 + 2p (17)

where MLL = the maximum LL and

p = the number of parameters.

In the composite of two or more functions, [a.sub.i] and [c.sub.i] of i [greater than or equal to] 2 are calculated by Equations 10 and 11. Therefore, these parameters are not included in the number of parameters needed to calculate the AIC (see Appendix Table).

The upper and lower 95% confidence intervals ([CI.sub.j]) of [[??]L.sub.j] were determined as follows:

[MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII]. (18)

The equations for describing the relation between SOR and FL, LOR and FL, and FL and BW were calculated in the same way.

Application of equations to walleye pollock

Walleye pollock were collected and used as a model for long-lived species. The relevant biological data were collected, processed, and compiled from various cruise data conducted by Japanese and U.S. agencies at a total of 97 sampling stations in the Bering Sea (95 stations) and Chukchi Sea Chukchi Sea (chək`chē), part of the Arctic Ocean N of the Bering Strait, between Siberia and Alaska, Wrangell Island lies to the west and the Beaufort Sea lies to the east.  (northeastward extension of the Bering Sea; 2 stations) during 1983-2002 (Fig. 2).

In the central Bering Sea (Aleutian Basin), adult walleye pollock vary in age from 5 to >20 years (McFarlane and Beamish, 1990; Traynor et al., 1990). Young fish (0 to 4) are distributed on the continental shelf and slope and then migrate into the basin area beginning at age 5 (Traynor et al., 1990). In the present study, the samples of walleye pollock in the Bering Sea are presumed to have been collected from the same population of fish. Samples of juvenile walleye pollock at two discrete positions in the Chukchi Sea were also treated as originating from the Bering Sea. Larvae Larvae, in Roman religion
Larvae: see lemures.
 were sampled with a MOCNESS MOCNESS Multiple Opening Closing Net Environmental Sensing System (plankton sampling gear)  net, and juveniles and adults were captured with mid-water or bottom trawl trawl - To sift through large volumes of data (e.g. Usenet postings, FTP archives, or the Jargon File) looking for something of interest.  nets. We measured the somatic length and BW of each fish and removed its otoliths (sagittae). For walleye pollock larger than 15 mm in somatic length, we measured FL, and for those smaller than 15 mm (with undeveloped fin rays), we measured TL. Difference in FL and TL was negligible in fish <15 mm; therefore TL is referred to as FL in the present analysis.

Specimens examined in the present study ranged from 4.56 mm to 803 mm FL. The number of samples used in the analysis of OL-FL equations is given in Table 1, as well as the size range of otolith measures and fish sizes. The approximate length of newly hatched larvae is 4.6 mm FL (=TL), 0.02 mm OL, and 0.01 mm SOR and LOR.

The relation between OL and FL was fitted to the general equations (Eqs. 1-4) and the allometric smoothing function (Eq. 12). The equations for describing the relation between SOR and FL, LOR and FL, and FL and BW were calculated in the same way.

Otolith processing

For measurement of SOR and LOR, the left or right otolith was selected and processed as a frontal section to reveal the perpendicular structure of the proximal surface, including the tips of rostrum and postrostrum, and core (Fig. 3A). The procedure for otolith processing followed that of Secor et al. (1992).

[FIGURE 2 OMITTED]

Larval larval

1. pertaining to larvae.

2. larvate.


larval migrans
see cutaneous and visceral larva migrans.
 and juvenile otoliths were embedded in epoxy resin epoxy resin (ēpok´sē, pok´sē),
n See resin, epoxy.
 adhesive (Epoxy epoxy

Any of a class of thermosetting polymers, polyethers built up from monomers with an ether group that takes the form of a three-membered epoxide ring. The familiar two-part epoxy adhesives consist of a resin with epoxide rings at the ends of its molecules and a curing
 bond quick 5; Konishi Co., Ltd., Osaka, Japan) on a glass slide, and OL was measured under a microscope (SMZ-U or Labophot-2A; Nikon Co., Tokyo, Japan) by using an image analysis system (ARGUS-10; Hamamatsu Photonics K. K. Co., Shizuoka, Japan). The otolith was then carefully polished with wet sandpaper sandpaper, abrasive originally made by gluing grains of sand to heavy paper sheets. Today sandpaper is made primarily with quartz, aluminum oxide, or silicon carbide grains, and is graded according to the size of the grains.  (no. 1200) and lapping paper (12-0.3 [micro]) as preparation for making the frontal section (Fig. 3B).

For the frontal section of large otoliths of postjuvenile and adult fish, the otolith proximal surface was placed facing up, and OL was measured. Then, the otolith proximal surface was marked at three points: the tip of the rostrum, the tip of the postrostrum, and the core region on the central concave Concave

Property that a curve is below a straight line connecting two end points. If the curve falls above the straight line, it is called convex.
 area. The otolith was embedded in epoxy resin (Epoxicure; Buehler Ltd., Lake Bluff, IL) on a hardened epoxy bed about 3 mm deep in a plastic mold. The hardened epoxy block containing the otolith was cut and trimmed by a micro cutter (MC-201; Maruto Instrument Co., Ltd., Tokyo, Japan) to a 3-mm-wide section that included the three marks. The trimmed sample was fixed on a slide glass with hot wax (Stick wax; Maruto Instrument Co., Ltd., Tokyo, Japan) and polished with wet sandpaper (no. 400-800) on a polishing machine (ML-101; Maruto Instrument Co., Ltd., Tokyo, Japan and SBT SBT Symplastin bleeding time 900; South Bay Technology Inc., San Clemente San Clemente (săn klĭmĕn`tē), city (1990 pop. 41,100), Orange co., S Calif., on the Pacific coast; inc. 1928. Camp Pendleton, a large U.S. marine base, adjoins the city, which is chiefly residential. , CA). Polishing was continued until the core and tips of the rostrum and postrostrum appeared. The polishing was also made on the opposite side of the section. The section was finally polished by hand with wet sandpaper (no. 1200). The thickness of the polished frontal section (including the thickness of the wax) was 0.28 [+ or -]0.07 mm (mean [+ or -]SD, n=50). The OL in the frontal section shrank (98.7 [+ or -]2.5%, n=1775) after the polishing; however the decrease was not analyzed in this study.

[FIGURE 3 OMITTED]

Results

Relation between otolith length (OL) and fork length (FL)

The most suitable equation to describe the OL (mm) and FL (mm) relationship chosen with the minimum AIC was the four-phase allometric smoothing function (Fig. 4). The minimum AIC in the general equations was an allometric equation with a constant term (Eq. 4). In the AIC, all allometric smoothing functions produced lower estimates than all of the general equations. In the allometric smoothing functions, the AIC decreased with the number of allometric smoothing functions, which increased from two to four. However, the AIC in the five-allometric smoothing function was higher than that in the four-phase allometric smoothing function (Table 2). The relation between OL (mm) and [[??].sub.FL] (mm) is given as follows:

FL = 31.55 [OL.sup.0.67] + 4.05 (0.00<OL<2.92) (19.1)

FL = 5.64 [OL.sup.1.51] + 40.11 (2.92 [less than or equal to] OL<16.48) (19.2)

FL = -26083.56 [OL.sup.-1-49] + 831.85 (16.48 [less than or equal to] OL<19.65) (19.3)

FL = 1.28 x [10.sup.-4] [OL.sup.4.56] + 424.57 (19.65 [less than or equal to] OL) (19.4)

[[??].sub.FL] = 0.41 [OL.sup.1.52] + 1.80. (20)

The coordinates (OL, FL) of the three inflection points were found at (2.92, 68.7), (16.48, 433.0), and (19.65, 525.0).

[FIGURE 4 OMITTED]

Relation between short otolith radius (SOR) and fork length (FL)

For the relation between SOR (mm) and FL (mm), we fitted the general equations (Eqs. 1-4) and the allometric smoothing function (Eq. 12). The minimum AIC was the four-phase allometric smoothing function. The relation between SOR (mm) and [[??].sub.FL] (mm) was also shown as follows:

FL = 55.18 [SOR.sup.0.61] + 2.51 (0.00<SOR<1.00) (21.1)

FL = 24.22 [SOR.sup.1.39] + 33.47 (1.00 [less than or equal to] SOR<7.55 (21.2)

FL = -55349.12 [SOR.sup.-2.78] + 639.86 (7.55 [less than or equal to] SOR<8.96 (21.3)

FL = 6.68 x [10.sup.-4] [SOR.sup.5.25] + 447.65 (8.96 [less than or equal to] SOR) (21.4)

([[??].sub.FL] = 2.19 [SOR.sup.1.37] + 1.91. (22)

The coordinates (SOR, FL) of the three inflection points were found at (1.00, 57.8), (7.55, 437.3), and (8.96, 514.1).

Relation between long otolith radius (LOR) and fork length (FL)

In a similar way, the relationship between LOR (mm) and FL (mm) was derived, and the minimum AIC was a four-phase allometric smoothing function. The relation between LOR (mm) and [[??].sub.FL] (mm) is also shown as follows:

FL = 48.98 [LOR.sup.0.65] + 3.26 (0.00<LOR<1.54) (23.1)

FL = 14.84 [LOR.sup.1.48] + 39.86 (1.54 [less than or equal to] LOR<9.03) (23.2)

FL = -16116.83 [LOR.sub.-1.77] + 754.41 (9.03 [less than or equal to] LOR<11.30) (23.3)

FL = 1.34x[10.sup.-4] [LOR.sup.5.44] + 464.28 (11.30 [less than or equal to] LOR) (23.4)

[[??].sub.FL] = 1.77 [LOR.sup.1.32] + 1.85. (24)

The coordinates (LOR, FL) of the three inflection points were found at (1.54, 68.1), (9.03, 428.8), and (11.30, 535.6).

Relation between fork length (FL) and body weight (BW) (g)

The relation between FL (mm) and BW (g) was fitted to the general equations (Eqs. 3 and 4), the allometric smoothing function (Eq. 12), and an allometric smoothing function without a constant term in the first function ([c.sub.1]=0). The minimum AIC was the three-phase allometric smoothing function without [c.sub.1]. The relation between FL (mm) and [[??].sub.BW] (g) is shown as follows:

BW = 2.01x[10.sup.-5] [FL.sup.2.77] (0.00<FL<70.0) (25.1)

BW = 6.61x[10.sup.-6] [FL.sup.3.02] + 0.21 (70.0 [less than or equal to] FL<431.2) (25.2)

BW = 4.17x[10.sup.-6] [FL.sup.3.09] + 13.89 (431.2 [less than or equal to] FL) (25.3)

[[??].sub.BW] = 1.06x[10.sup.-5] [FL.sup.2.63]. (26)

The coordinates (FL, BW) of the two inflection points were seen at (70.0, 2.6) and (431.2, 586.2).

Discussion

The allometric smoothing function

The best equation to describe the relation between OL and FL in walleye pollock throughout the entire lifespan of the fish was depicted by a four-phase allometric smoothing function with three inflection points. In our preliminary analysis, a quadratic equation was applied for the OL and FL relationship, and the resulting AIC was 21,743. This value was smaller than that derived from general equations, but was higher than the value derived from any of our allometric smoothing functions (see Table 2). The general equations and the quadratic equation do not adequately reflect the variable otolith and somatic allometric growth during the whole lifespan of the species.

Equations relating OL to somatic length have been developed to represent complex growth curves. Bervian et al. (2006) used an allometric equation transformed from the logistic function A logistic function or logistic curve models the S-curve of growth of some set P. The initial stage of growth is approximately exponential; then, as saturation begins, the growth slows, and at maturity, growth stops.  for the OL-TL relationship in whitemouth croaker croaker, member of the abundant and varied family Sciaenidae, carnivorous, spiny-finned fishes including the weakfishes, the drums, and the whitings. The croaker has a compressed, elongated body similar to that of the bass.  (Micropogonias furnieri). Imai et al. (2002) applied a Gompertz model to the relation between otolith height and standard length in cyprinid fish Noun 1. cyprinid fish - soft-finned mainly freshwater fishes typically having toothless jaws and cycloid scales
cyprinid

cypriniform fish - a soft-finned fish of the order Cypriniformes
 "Ukekuchi-ugui" (Tribolodon nakamurai). However, these two models have limitations in both the shape of the curve and the number of inflection points. If the species in the model, such as walleye pollock in this study, has more than two inflection points in the derived curve, these models cannot represent the allometric growth patterns adequately. Our present allometric smoothing function has no such limitation in the number of inflection points or the shape of curve between inflection points and responds appropriately to the growth pattern of the fish.

Our allometric smoothing function has the ability to satisfy both the needs for mathematical continuity (see Fig. 1) and objectivity in the selection of an equation (see Table 2) while allowing for biological events. The allometric smoothing function was developed by using a mathematical smoothing method based on an allometric equation with a constant term. Among the smoothing methods available, the moving average, autoregression, and spline In computer graphics, a smooth curve that runs through a series of given points. The term is often used to refer to any curve, because long before computers, a spline was a flat, pliable strip of wood or metal that was bent into a desired shape for drawing curves on paper. See Bezier and B-spline.  curve proved to be useful for fitting scatter sample plots, a type of plot that cannot be properly fitted in a single function. Nevertheless, the moving average requires that the modeler be subjective in determining the number of data points used to calculate the average. In contrast, the autoregression allows a measure of objectivity in selecting the equation; however steady growth conditions are assumed with this method. Finally, the spline curve is based on a multidimensional function developed by mathematical procedure where biological events were not taken into consideration.

Until recently, back-calculation models for individual fish growth have been developed to estimate past fish length and growth, under the assumption that fish growth is proportional to otolith growth (Francis, 1990). However, many studies have recognized that fish growth and otolith growth are uncoupled. "Growth rate effect" and "age effect" are two of the most important factors affecting uncoupling. The growth rate effect occurs when otoliths from slow growing fish are larger than those of fast growing fish, when these fish are compared at the same somatic length (Reznick, 1989; Campana, 1990; Secor and Dean, 1992). Adapting Campana's (1990) biological intercept method can reduce the error inherent in back-calculated somatic length from this growth-rate effect. Additionally, with the back-calculation model developed by Morita and Matsuishi (2001), the fact that age effect on otolith size increases continuously during nongrowth periods (Mugiya, 1990; Secor and Dean, 1992) can be taken into account. The inclusion of these growth and age effects of individual fish to our allometric smoothing function provides a more accurate analysis of growth at the individual level in the back-calculation model.

Application of the allometric smoothing function for walleye pollock

Our best equation to describe the relation between OL and FL was derived as a four-phase allometric smoothing function with three inflection points (Fig. 4). In Huxley's (1924) allometric equation (y=[ax.sup.b]), relative growth rate was expressed by the relative growth coefficient (allometric coefficient, b). Our allometric smoothing function is based on the allometric equation with an added constant term (y=[ax.sup.b] + c). The superscript Any letter, digit or symbol that appears above the line. For example, 10 to the 9th power is written with the 9 in superscript (109). Contrast with subscript.  b in our equation is not an allometric coefficient; it indicates the relative growth between x and y on the slope of the curve between inflection points.

The explicit changes in the shape of the curves and the appearance of inflection points in our equation imply that ecological and physiological changes are associated with unique aspects of life history of walleye pollock. In the first function (Eq. 19.1), somatic growth is slower than otolith growth, whereas in the second function (Eq. 19.2), somatic growth is faster than otolith growth. Concerning these contrasting outcomes, previous findings indicate that possible ecological changes may have occurred at a particular size range, as evidenced by otolith characters such as the check-mark. Nishimura (1993) reported that 32% of age-1 walleye pollock caught in the Bering Sea revealed check-marks inside the first annual ring of the otolith and he concluded that the check-mark would have been formed at 40-80 mm FL (mode: 70 mm) at an age of 4 months. This check-mark was frequently detected in our samples (Fig. 3B). Similarly, in Funka Bay, Japan, 58% of age-1 walleye pollock had checkmarks inside the first annual ring (Katakura et al., 2003). The settlement of juvenile walleye pollock from pelagic pelagic

living in the middle or near the surface of large bodies of water such as lakes or oceans.
 to benthic ben·thos  
n.
1. The collection of organisms living on or in sea or lake bottoms.

2. The bottom of a sea or lake.



[Greek.
 habitat began from 70 mm TL and was completed when the fish reached >85 mm TL in Funka Bay (Nakatani and Maeda, 1987). Our calculated FL at the first inflection point was 68.7 mm, which is approximately the same size as that when settlement begins. The check-mark on the otoliths of walleye pollock appears to occur, irrespective of irrespective of
prep.
Without consideration of; regardless of.

irrespective of
preposition despite 
 differences in geographic features of inhabited waters. Victor (1982) suggested that the check-mark occurs as a settlement mark and indicates the occurrence of physiological changes or biological processes associated with settlement. Thus, we conclude that the first inflection point at a particular size in our allometric growth curve shows the adaptive response The adaptive response is a form of direct DNA repair in E. coli that is initiated against alkylation, particularly methylation, of guanine or thymine nucleotides or phosphate groups on the sugar-phosphate backbone of DNA.  of walleye pollock to physiological and environmental changes at the time of settlement.

The state of b < 0 but a < 0 in the third function (Eq. 19.3) also implies that somatic growth is slower than otolith growth. The allometric coefficient between OL and somatic length drastically changes in association with sexual maturity (Bervian et al., 2006). The Bogoslof area in the Aleutian Basin is known as one of the main spawning grounds of walleye pollock in winter. In this area, fish length at maturity was 360-570 mm FL (mean 464 mm) in males and 370-610 mm FL (482 mm) in females (Traynor et al., 1990). The second inflection point that appeared at 433.0 mm FL in our study is situated within the size range of maturing fish. We assume that the fish length around the second inflection point corresponds to the timing of an energy shift from somatic growth to gonad gonad /go·nad/ (go´nad) a gamete-producing gland; an ovary or testis.gonad´algonad´ial

indifferent gonad  the sexually undifferentiated gonad of the early embryo.
 development, and to corresponding changes that occur in the shifts of the allometric growth curve.

Both the third inflection point at 525.0 mm FL and the fourth function (Eq. 19.4) indicate faster somatic growth than otolith growth. Otolith growth persists despite the cessation of body growth (Mugiya, 1990; Secor and Dean, 1992); therefore, the otolith is also assumed to grow throughout the lifetime of walleye pollock (McFarlane and Beamish, 1990). Older annual rings annual rings, the growth layers of wood that are produced each year in the stems and roots of trees and shrubs. In climates with well-marked alternations of seasons (either cold and warm or wet and dry), the wood cells produced when water is easily available and  appear on the ventral ventral /ven·tral/ (ven´tral)
1. pertaining to the abdomen or to any venter.

2. directed toward or situated on the belly surface; opposite of dorsal.


ven·tral
adj.
 proximal surface region, as evidenced in the transverse section (McFarlane and Beamish, 1990), similar to those seen in the proximal surface region of the frontal section (Fig. 3A). The shape of the large otolith is an arched curve connecting the tip of the rostrum, core, and tip of the postrostrum. Thus, the third inflection point is considered to be closely related to the slow growth phase of otoliths, accompanying the change in the direction of growth in otoliths from length (between the tips of rostrum and postrostrum) to width (proximal surface region increasing), and an increase in the slope of the curve.

The best equations that describe the relation of SOR to FL, and LOR to FL were also represented by the four-phase allometric smoothing function with three inflection points (Eqs. 21.1-21.4 and 23.1-23.4). The characteristics of the allometric otolith and somatic growth patterns are similar, as found in the OL and FL relation. These relationships can be useful for the analysis of growth of juvenile walleye pollock from the back-calculation of adult otoliths. The measurements of the SOR or LOR of fish at young ages allow one to convert these measurements to FL values. Similarly, our equations allow the conversion of FL from any otolith measurement (OL, SOR, and LOR) into BW.

The resultant coordinates of the two inflection points at FL of 70.0 mm and 431.2 mm derived from our FL and BW relationship (Eqs. 25.1-25.3) were very close to the first (68.7 mm FL) and second (433.0 mm FL) inflection points that emerged in the OL and FL relationship (Eqs. 19.1-19.4). Because settlement and sexual maturity are distinct biological events in the life history of this fish, the timing of these events will be clearly demonstrated in allometric growth.

The condition factor (CF) of fish is generally calculated by a formula (CF=[10.sup.3]xBW/[FL.sup.3]). However, our results indicate that the relation between FL and BW is not constant over the lifetime of walleye pollock, and probably for other fish species. In our equations, b increased as fish grew in association with life stages from [b.sub.1]=2.77 to [b.sub.2]=3.02 and [b.sub.3]=3.09, and this inflation has potential implications for studies of fish growth.

The present equations can be applied to the reconstruction of size composition of fish from the remnant otoliths found in the digestive organs of predators. We expect that these reliable equations, with transformation of otolith measurement data into FL or BW values, are useful not only for fish growth analysis, but also for food habit and energetic studies (e.g., food conversion efficiency studies) because these studies rely substantially on the back-calculation method.

The samples of walleye pollock used in this study provided a range of fish lengths from 4.56 mm FL (=TL in larvae) to 803 mm FL. Newly hatched walleye pollock measure about 4.6 mm TL (Nishimura and Yamada, 1988), and the oldest fish reported from the Bering Sea was 28 years old and measured 530 mm FL (McFarlane and Beamish, 1990). Thus, the present data set can be regarded as including almost the entire size range of walleye pollock over the whole life span. Because the proposed allometric smoothing functions can be extensively applicable to all life stages of walleye pollock, we term these equations "allometric smoothing functions for otolith and somatic growth over the lifespan of walleye pollock."

Appendix

The spreadsheets of the computer application Microsoft Excel (tool) Microsoft Excel - A spreadsheet program from Microsoft, part of their Microsoft Office suite of productivity tools for Microsoft Windows and Macintosh. Excel is probably the most widely used spreadsheet in the world.

Latest version: Excel 97, as of 1997-01-14.
 (Microsoft Co., Tokyo, Japan) were used as an analysis platform, and an add-in tool solver was used for the optimization of the present OL-FL equation. The solver has been standard add-in tool in Excel since the Excel 95 version. The optimized value of the parameters and the Akaike's information criterion (AIC) in the pres ent equations were identical with the use of Excel 2003 and Excel 2007. The modified spreadsheet of a Microsoft Excel workbook work·book  
n.
1. A booklet containing problems and exercises that a student may work directly on the pages.

2. A manual containing operating instructions, as for an appliance or machine.

3.
 shows how to fit the two-phase allometric smoothing function for the otolith length (OL) and fork length (FL) relationship (Appendix Table below). The most suitable equation to describe the relation between otolith length and somatic length was chosen if it accorded with the minimum AIC.
Appendix Table
The modified spreadsheet of a Microsoft Excel workbook is shown to
fit the two-phase allometric smoothing function for the otolith
length (OL, mm) and fork length (FL, mm) relationship in walleye
pollock (Theragra chalcogramma) (n=2354). At the add-in tool of the
Solver parameters dialog box in Excel, the Akaike's information
criterion (AIC: cell B3) sits in the "target cell" and the
parameters (cells B5 to B12) sit in the "changing cell." The
optimization for the equation is a minimized AIC with adjusting
parameters using solver constraints. [MATHEMATICAL EXPRESSION NOT
REPRODUCIBLE IN ASCII] = estimated standard deviation of FL of
individual j; [f.sub.1]([OL.sub.j]) = calculated FL for individual
j in the first function; [f.sub.2]([OL.sub.j]) = calculated FL for
individual j in the second function; [MATHEMATICAL EXPRESSION NOT
REPRODUCIBLE IN ASCII] = employed calculated FL for individual j;
[L.sub.j] = likelihood of individual j; ln [L.sub.j] =
log-likelihood of individual j; LL = a log-likelihood; d, e, f =
parameters for [MATHEMATICAL EXPRESSION NOT REPRODUCIBLE IN ASCII];
[a.sub.1], [b.sub.1], [c.sub.1] = Parameters for
[f.sub.1]([OL.sub.j]); and [a.sub.2], [b.sub.2], [c.sub.2] =
parameters for [f.sub.2]([OL.sub.j]); and [q.sub.1] = a value of OL
on the inflection point.

           A                       B                        C

1    Two-phase allometric smoothing function         OL

2    LL               = SUM(J2:J2355)                      1.06
3    AIC              = -2*B2+2*COUNT(B5:B12)              1.09
4    Parameters                                            1.11
5    d                            0.41                     1.15
6    e                            1.54                     1.16
7    f                            1.76                     1.17
8    [a.sub.1]                   32.41                     1.18
9    [b.sub.1]                    0.64                     1.23
10   [c.sub.1]                    3.34                     1.25
11   [q.sub.1]                    2.25                    13.73
12   [b.sub.2]                    1.37                    13.51
13   [a.sub.2]        = BS*B9/B12*Bll^(B9-B12)            13.76
14   [c.sub.2]        = B8*Bll^B9*(1-(B9/B12))+B10         1.12

           D                       E

1    FL               [MATHEMATICAL EXPRESSION NOT
                        REPRODUCIBLE IN ASCII]
2         37.2        = $B$5*C2^$B$6+$B$7
3         38.1        = $B$5*C3^$B$6+$B$7
4         32.8        = $B$5*C4^$B$6+$B$7
5         37.8        Copy down to row 2355, where n=2354
6         36.8                   2.281
7         36.9                   2.288
8         35.5                   2.295
9         40.8                   2.329
10        39.4                   2.344
11        308                    24.734
12        351                    24.173
13        333                    24.811
14        33.1                To row 2355

           F                                  G

1    [f.sub.1]([OL.sub.j])          [f.sub.2]([OL.sub.j])

2    = $B$8*C2^$B$9+$B$10           = $B$13*C2^$B$12+$B$14
3    = $B$8*C3^$B$9+$B$10           = $B$13*C3^$B$12+$B$14
4    = $B$8*C4^$B$9+$B$10           =$B$13*C4^$B$12+$B$14
5               Copy down to row 2355, where n=2354
6        38.973                      42.563
7        39.169                      42.685
8        39.364                      42.807
9        40.332                      43.421
10       40.715                      43.671
11      175.993                     335.852
12      174.222                     329.204
13      176.234                     336.761
14

           H                                   I

1    [MATHEMATICAL EXPRESSION NOT       [L.sub.j]
       REPRODUCIBLE IN ASCII]
2    = IF(C2<$B$11,F2,G2)               = NORMDIST(D2,H2,E2,FALSE)
3    = IF(C3<$B$11,F3,G3)               = NORMDI5T(D3,H3,E3,FALSE)
4    =IF(C4<$B$11,F4,G4)                =NORMDIST(D4,H4,E4,FALSE)
5                 Copy down to row 2355, where n=2354
6        38.973                              0.111
7        39.169                              0.106
8        39.364                              0.042
9        40.332                              0.166
10       40.715                              0.147
11      335.852                              0.008
12      329.204                              0.011
13      336.761                              0.015
14                              To row 2355

           J

1    ln [L.sub.j]

2    = IF(I2<=0,-10000,LN(I2))
3    = IF(I3<=0,-10000,LN(I3))
4    =IF(I4<=0,-10000,LN(I4))
5   Copy down to row 2355, where n=2354
6        -2.197
7        -2.238
8        -3.167
9        -1.793
10       -1.916
11       -4.761
12       -4.511
13       -4.141
14     To row 2355


Acknowledgments

We thank J. R. Bower, K. Morita, N. J. Williamson, and the anonymous referees for invaluable advice on the manuscript, T. Yanagimoto, K. Mito, T. Honkalehto, S. de Blois, N. Tanimata, R. Nanbu, and O. Sakai for assistance with the sampling and measurements of fish samples. We also thank the scientists of the following agencies for the offer of biological data and otolith samples: National Research Institute of Far Seas Fisheries, Fisheries Research Agency, Japan; Hokkaido National Fisheries Research Institute, Fisheries Research Agency, Japan; Graduate School of Fisheries Sciences, Hokkaido University History
Hokkaido University (Hokudai for short) was originally founded in 1876 as Sapporo Agricultural College (札幌農學校
, Japan; and Alaska Fisheries Science Center, National Marine Fisheries Service, National Oceanic and Atmospheric Administration, USA. We also thank the crews of the RV Kaiyo Maru, TS Oshoro Maru, RV Miller Freeman An earlier subsidiary of United News & Media (www.unm.com). Miller Freeman was a leading trade show organizer and publisher serving a variety of industries. In 1996, it acquired the Blenheim Group, producers of the popular PC EXPO trade show, and in 1999, it acquired the CMP , and chartered fishing vessels Customary International Law provides that coastal fishing boats and small boats engaged in trade, as distinguished from seagoing fishing boats and large traders, are immune from attack and seizure during war. This Immunity is lost if fishing vessels take part in the hostilities. .

Manuscript submitted 21 August 2006 to the Scientific Editor's Office.

Manuscript approved for publication 30 March 2007 by the Scientific Editor.

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troph·ic
adj.
Of, relating to, or characterized by nutrition.
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Hunt, G. L., P. Stabeno, G. Walters, E. Sinclair, R. D. Brodeur, J. M. Napp, and N. A. Bond. 2002. Climate change and control of the southeastern Bering Sea pelagic ecosystem. Deep-Sea Res. II 49:5821-5853.

Huxley, J. S. 1924. Constant differential growth-ratios and their significance. Nature 14:895-896.

Imai, C., H. Sakai, K. Katsura Katsura or Katsuura might refer to: Architecture
  • The Katsura imperial villa, one of Japan's most important architectural treasures, and a World Heritage Site
Botany
, W. Honto, Y. Hida, and T. Takazawa. 2002. Growth model for the endangered cyprinid fish Tribolodon nakamurai based on otolith analyses. Fish. Sci. 68:843-848.

Katakura, S., M. Ohta, M. Jin, and Y. Sakurai. 2003. Otolith-marking experiments of juvenile walleye pollock Theragra chalcogramma using oxytetracycline oxytetracycline /oxy·tet·ra·cy·cline/ (ok?se-tet?rah-si´klen) a broad-spectrum tetracycline antibiotic produced by Streptomyces rimosus, used as the base or the hydrochloride salt. , alizarin alizarin (əlĭz`ərĭn), or 1,2-dihydroxyanthraquinone, mordant vegetable dye obtained originally from the root of the madder plant (Rubia tinctorum), in which it occurs as a glucoside.  complexone, and alizarin red Noun 1. alizarin red - any of various acid dyes; used for dyeing wool scarlet red
alizarin carmine, alizarin crimson

alizarin, alizarine - an orange-red crystalline compound used in making red pigments and in dyeing
 S. Suisanzoshoku 51:327-335. [In Japanese with English summary.]

McFarlane, G. A., and R. J. Beamish. 1990. An examination of age determination structures of walleye pollock (Theragra chalcogramma) from five stocks in the northeast Pacific Ocean. Int. North Pac. Fish. Comm. Bull. 50:37-56.

Morita, K., and T. Matsuishi. 2001. A new model of growth back-calculation incorporating age effect based on otoliths. Can. J. Fish. Aquat. Sci. 58:1805-1811.

Mugiya, Y. 1990. Long-term effects ofhypophysectomy on the growth and calcification calcification /cal·ci·fi·ca·tion/ (kal?si-fi-ka´shun) the deposit of calcium salts in a tissue.

dystrophic calcification
 of otoliths and scales in the goldfish Carassius auratus Carassius auratus

see goldfish.
. Zool. Sci. 7:273-279.

Nakatani, T., and T. Maeda. 1987. Distribution and movement of walleye pollock larvae Theragra chalcogramma in Funka Bay and the adjacent waters, Hokkaido. Nippon Suisan Gakkaishi 53:1585-1591. [In Japanese with English summary.]

Nishimura, A. 1993. Age determination of walleye pollock based on the otoliths (Review). In Present status and prospects of research on the biology and fisheries resources of walleye pollock and other gadid species in the waters around Hokkaido--special edition of the "Hokkaido Suketoudara Kenkyu Group" (Hokkaido Walleye Pollock Research Group) for the 25th anniversary (H. Yoshida, ed.), p.37-49. Sci. Rep. Hokkaido Fish. Exp. Stn. 42.

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Guppies is an acronym which stands for Generation X Yuppies. The combination of the two nelogistic generational terms is used to loosely identify anyone who was in their twenties during the 1990s,
 (Poecilia reticulata). Can. J. Fish. Aquat. Sci. 46:108-112.

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microstructure
Noun

a structure on a microscopic scale, such as that of a metal or a cell
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Seiji Katakura (contact author) (1)

Hisatoshi Ikeda (2)

Akira Nishimura (1)

Tsuneo Nishiyama (3)

Yasunori Sakurai (2)

Email address See Internet address.  for S. Katakura: seijika@fra.affrc.go.ip

(1) Hokkaido National Fisheries Research Institute 116, Katsurakoi, Kushiro Hokkaido 085-0802, Japan

(2) Graduate School of Fisheries Sciences Hokkaido University, 3-1-1, Minato-cho, Hakodate Hokkaido 041-8611, Japan

(3) Department of Marine Sciences and Technology Hokkaido Tokai University, 5-1-1-1, Minamisawa, Minami-ku Sapporo, Hokkaido 005-8601, Japan
Table 1
The size ranges (in terms of length and weight) of walleye pollock
(Theragra chalcogramma) examined in the Bering Sea during 1983-2002
to describe the relation between  x (the independent variable) and
y (the dependent variable). OL = otolith length; FL = fork length;
SOR = short otolith radius; LOR = long otolith radius; and BW = body
weight.

The variables
(x [left below] and              Range of x
y [right below])
                            Minimum        Maximum

OL (mm) and FL (mm)     2.27x[10.sup.-2]    25.98
SOR (mm) and FL (mm)    9.22x[10.sup.-3]    11.80
LOR (mm) and FL (mm)    1.22x[10.sup.-2]    14.50
FL (mm) and BW (g)           35.88           803

The variables
(x [left below] and               Range of y
y [right below])                                      Number of
                            Minimum        Maximum   samples (n)

OL (mm) and FL (mm)           4.56           803         2354
SOR (mm) and FL (mm)          4.56           803         1752
LOR (mm) and FL (mm)          4.56           803         1704
FL (mm) and BW (g)            0.24          3014         2891

Table 2
The effects of method and treatment on ovary weight among the
species Atlantic cod (Gadus morhua), haddock (Melanogrammus
aeglefinus), and American plaice (Hippoglossoides
plate.ssoide.s), within the region Georges Bank (GB), the Gulf of
Maine (GOM) or within both regions combined (Combined), and
between regions for Atlantic cod. T-tests compare percent change
in fresh weight among species within each treatment group. The
methods column designates whether ovaries were used as 1.5-mL
subsamples (Sub) or as entire lobes (Lobe). df = degrees of
freedom, t = t-statistic, * = statistically significant at the
appropriate Bonferroni adjusted [alpha]-value.

Species           Method   Region     Treatment      t

Atlantic cod      Sub      GOM        Formalin    -0.24
American plaice   Sub      GOM        Gilson's     3.05
                                      Ethanol     -9.61
                                      Freezing     7.47
Atlantic cod      Lobe     GB         Formalin    -3.73
Atlantic cod      Lobe     GOM
Atlantic cod      Sub      GOM        Formalin     6.06
Atlantic cod      Lobe     GOM
Atlantic cod      Lobe     GB         Formalin    -1.19
Haddock           Lobe     GB
Atlantic cod      Lobe     Combined   Formalin     1.33
Haddock           Lobe     GB

                                  [alpha]-
Species           df   P-value     values

Atlantic cod      38    0.81       0.05
American plaice   37    0.0042 *   0.025
                  37   <0.001 *    0.013
                  32   <0.001 *    0.017
Atlantic cod      40   <0.001 *    0.05
Atlantic cod
Atlantic cod      44   <0.001 *    0.05
Atlantic cod
Atlantic cod      36    0.24       0.05
Haddock
Atlantic cod      59    0.19       0.05
Haddock

(1) [alpha]-values lower than 0.05 were adjusted by the
sequential Bonferroni procedure for multiple comparisons
(Quinn and Keough, 2002).
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Author:Katakura, Seiji; Ikeda, Hisatoshi; Nishimura, Akira; Nishiyama, Tsuneo; Sakurai, Yasunori
Publication:Fishery Bulletin
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Date:Oct 1, 2007
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