Amoeba-resisting bacteria and ventilator-associated pneumonia. (Research).To evaluate the role of amoeba-associated bacteria as agents of ventilator-associated pneumonia (VAP (Value Added Process) An executable program in a NetWare 2.x server. Starting with NetWare 3.x, VAPs were replaced by NLMs. See NetWare. ), we tested the water from an intensive care unit (ICU ICU intensive care unit. ICU abbr. intensive care unit ICU see intensive care unit. ICU ) every week for 6 months for such bacteria isolates; serum samples and bronchoalveolar lavage Bronchoalveolar lavage A way of obtaining a sample of fluid from the airways by inserting a flexible tube through the windpipe. Used to diagnose the type of lung disease. samples (BAL (1) (Basic Assembly Language) The assembly language for the IBM 370/3000/4000 mainframe series. (2) (Branch And Link) An instruction used to transfer control to another part of the program. BAL - Basic Assembly Language ) were also obtained from 30 ICU patients. BAL samples were examined for amoeba-associated bacteria DNA DNA: see nucleic acid. DNA or deoxyribonucleic acid One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes. by suicide-polymerase chain reaction, and serum samples were tested against ICU amoeba-associated bacteria. A total of 310 amoeba-associated bacteria from 10 species were isolated. Twelve of 30 serum samples seroconverted to one amoeba-associated bacterium isolated in the ICU, mainly Legionella Legionella /Le·gion·el·la/ (le?jah-nel´ah) a genus of gram-negative, aerobic, rod-shaped bacteria (family Legionellaceae), normal inhabitants of lakes, streams, and moist soil; they have often been isolated from cooling-tower water, anisa and Bosea massiliensis, the most common isolates from water (p=0.021). Amoeba-associated bacteria DNA was detected in BAL samples from two patients whose samples later seroconverted. Seroconversion seroconversion /se·ro·con·ver·sion/ (-con-ver´zhun) the change of a seronegative test from negative to positive, indicating the development of antibodies in response to immunization or infection. was significantly associated with VAP and systemic inflammatory response syndrome systemic inflammatory response syndrome A term that 'was developed to imply a clinical response arising from a nonspecific insult and includes two or more of the following. See Sepsis, Septic shock, Severe sepsis. , especially in patients for whom no etiologic agent was found by usual microbiologic investigations. Amoeba-associated bacteria might be a cause of VAP in ICUs, especially when microbiologic investigations are negative. ********** Hospital-acquired pneumonia hospital-acquired pneumonia Nosocomial pneumonia Infectious disease Pulmonary infection acquired during a hospital stay which is often more severe than community-acquired pneumonia Risk factors Immune compromise, alcoholism, elderly, aspiration due to intubation. occurs in 0.5% to 1% of admitted patients admitted, representing 10% to 15% of all nosocomial infections Nosocomial infections Infections that were not present before the patient came to a hospital, but were acquired by a patient while in the hospital. Mentioned in: Enterobacterial Infections, Staphylococcal Infections ; pneumonia is the most common cause of nosocomial infection Nosocomial infection An infection that can be acquired in a hospital. ABPA is a nosocomial infection. Mentioned in: Allergic Bronchopulmonary Aspergillosis, Hospital-Acquired Infections, Pseudomonas Infections in intensive-care units (ICUs) (1). This pneumonia is associated with high death rates. As the etiologic agent of pneumonia remains unknown in 20% to 50% of cases (2), identifying new lung pathogens is a major public health goal. Aquatic bacteria such as Legionella spp., Pseudomonas Pseudomonas A genus of gram-negative, nonsporeforming, rod-shaped bacteria. Motile species possess polar flagella. They are strictly aerobic, but some members do respire anaerobically in the presence of nitrate. spp., Stenotrophomonas spp., Burkholderia spp., or Acinetobacter spp Acinetobacter spp Bacteriology A widely distributed bacterium found in moist hospital environments, which may establish itself in the respiratory flora and on the skin of Pts with prolonged hospitalization, often via contaminated medical instruments–eg, . may colonize col·o·nize v. col·o·nized, col·o·niz·ing, col·o·niz·es v.tr. 1. To form or establish a colony or colonies in. 2. To migrate to and settle in; occupy as a colony. 3. in hospital water supplies and have previously been shown to be causally associated with cases of nosocomial infections (3). Free-living amoebae have been shown to be a reservoir of pathogens such as Legionella sp., Burkholderia picketti, and Cryptococcus neoformans (4-7). The most studied amoebae-associated bacterium is Legionella pneumophila, the agent of Legionnaires' disease Legionnaires' disease A type of pneumonia usually caused by infection with the bacterium Legionella pneumophila, but occasionally with a related species (such as L. micdadei or L. dumoffii). (8), which frequently results from exposure to contaminated aerosols. Additional amoeba-associated bacteria might be implicated im·pli·cate tr.v. im·pli·cat·ed, im·pli·cat·ing, im·pli·cates 1. To involve or connect intimately or incriminatingly: evidence that implicates others in the plot. 2. in community-acquired pneumonia community-acquired pneumonia Pneumonia caused by an infection currently present in the community; CAP is the most common cause of infectious death–US, and number 6 killer overall; of the 57% of CAPs in which a pathogen is identified, S pneumoniae , including Legionella-like amoebal pathogens (9) and members of the genus Parachlamydia (10). As part of research into the diversity of bacterial agents associated with amoebae in hospital water supplies, we have identified a new [alpha]-Proteobacteria belonging to the Bradyrhizobiaceae family (11-13). We demonstrated that patients with nosocomial pneumonia nosocomial pneumonia An infection of lungs–bronchoalveolar unit–in a Pt who has been hospitalized ≥ 48 hrs, and directly attributable to pathogens acquired during the hospital visit Etiology Pseudomonas spp, S aureus, Legionella hospitalized in the vicinity of the contaminated water in a public hospital of our city have elevated antibody titers to these bacteria (14). In this study, we performed the same kind of analysis but focused our work on a single ICU during a 6-month period. Amoeba-associated bacteria were periodically evaluated in all ICU water taps. To evaluate contact of patients hospitalized in this ICU and amoeba-associated bacteria in the water, serum and bronchoalveolar lavages (BAL) samples were periodically sampled. Serum samples were tested in an immunofluorescence Immunofluorescence A technique that uses a fluorochrome to indicate the occurrence of a specific antigen-antibody reaction. The fluorochrome labels either an antigen or an antibody. assay against the isolated bacteria to detect seroconversions, and DNA of these bacteria were detected in BAL samples by suicide-polymerase chain reaction (PCR PCR polymerase chain reaction. PCR abbr. polymerase chain reaction Polymerase chain reaction (PCR) ) (15,16), a PCR technique without positive controls that incorporates "disposable" primers to avoid false-positive results. The second part of this work was to evaluate if exposure to the amoeba-associated bacteria in the ICU could be associated with disease. Thus, we specifically studied some clinical markers of infection, including fever, systemic inflammatory response syndrome (SIRS), and pneumonia for patients admitted to the ICU. As a definition of pneumonia based only on clinical and roentgenographic roent·gen·og·ra·phy n. Photography with the use of x-rays. roent gen·o·graph criteria has been criticized
for low specificity (17-19), we used strict criteria in the definition.
These criteria were applied to cases in which bacterial documentation
was negative to determine if disease observed in patients hospitalized
in an ICU may be attributed to amoeba-associated bacteria.Materials and Methods All patients admitted to the ICU during a 26-week period who needed intubation intubation /in·tu·ba·tion/ (in?too-ba´shun) the insertion of a tube into a body canal or hollow organ, as into the trachea. endotracheal intubation and mechanical ventilation mechanical ventilation n. A mode of assisted or controlled ventilation using mechanical devices that cycle automatically to generate airway pressure. were included. Patients were evaluated at admission by the Acute Physiology and Chronic Health Evaluation II score (20). At admission and every week thereafter, temperature, leukocytes and platelet counts, hepatic enzymes, and presence of SIRS and ventilator-associated pneumonia (VAP) were recorded. Serum samples were obtained from patients at admission, every 7 days afterwards, and at discharge. BAL was obtained at admission immediately after intubation by using protected mini-bronchoalveolar lavage lavage /la·vage/ (lah-vahzh´) 1. the irrigation or washing out of an organ, as of the stomach or bowel. 2. to wash out, or irrigate. lav·age n. (Combicath, Plastimed, Le-Plessy-Bouchard, France), then performed when a lung infiltrate suggestive of suggestive of Decision making adjective Referring to a pattern by LM or imaging, that the interpreter associates with a particular–usually malignant lesion. See Aunt Millie approach, Defensive medicine. pneumonia appeared, and repeated every week until pneumonia resolved. BALs are part of the routine diagnosis and follow-up of pneumonia in the ICU and were not performed specifically for the study. Informed consent was obtained from the patient's family, according to French legislation. Data about bacteria isolated from blood cultures, lung secretions, and urine by conventional procedures were recorded. When isolated from urine and lung secretions, bacteria were only considered as pathogenic when concentration in the specimen was [greater than or equal to] [10.sup.5] and [greater than or equal to] [10.sup.6] CFU/mL, respectively (21). Definitions of VAP and SIRS were based on previously published criteria (22-25), but to increase specificity, we limited our study to severe cases of VAP by adding strict criteria (Table 1). Taps and ice machine water were sampled every other week, as previously reported (11). The procedure for isolating bacteria from water and lung secretions by using cocultivation with Acanthamoeba Acanthamoeba /Acan·tha·moe·ba/ (ah-kan?thah-me´bah) a genus of free-living ameboid protozoa (order Amoebida) found usually in fresh water or moist soil. Certain species, such as A. astronyxis, A. castellanii, A. culbertsoni, A. polyphaga followed by subculture onto BCYE agar plates has been detailed elsewhere (11,26). Bacteria were identified by using 16S rRNA gene sequence comparisons as previously described (27). Legionella species were identified by using mip gene amplification Gene amplification The process by which a cell specifically increases the copy number of a particular gene to a greater extent than it increases the copy number of genes composing the remainder of the genome (all the genes which make up the genetic machinery and sequencing (28). Twenty bacterial antigens were tested by microimmunofluorescence as previously reported (14,29). Bacterial species isolated from the ICU water during the studied period and 10 other species previously isolated in the same conditions from other sites (Bosea eneae, B. vestrisii, B. thiooxydans, Mesorhizobium amorphae, Azorhizobium caulinodans, Afipia jelis, A. felis genospecies A, A. clevelandensis, A. birgiae, and A. massiliae [11-14]) were tested. The serologic tests were performed on the first serum samples from all patients admitted to the ICU; these patients were available for a second sample (30 patients). The control group comprised 10 patients in the same ICU. These patients had shorter stays and had samples taken at admission but was not available (100 patients) and 114 patients with other diseases, including Q fever Q fever: see rickettsia. (10 samples), trench fever trench fever: see rickettsia. (5 samples), tularemia tularemia (t lərē`mēə) or rabbit fever, acute, infectious disease caused by Francisella tularensis (Pasteurella tularensis). (8 samples), Mediterranean
spotted fever spot·ted fevern. A tick typhus caused by Rickettsia rickettsii, such as Rocky Mountain spotted fever. spotted fever Rocky Mountain spotted fever, see there (10 samples), epidemic typhus epidemic typhus n. A form of typhus characterized by high fever, mental and physical depression, and macular and papular eruptions; it is caused by Rickettsia prowazekii and transmitted by body lice. (5 samples), syphilis (10 samples), cat scratch disease cat scratch disease n. An infectious disease that may follow the scratch or bite of a cat, producing localized inflammation of lymph nodes and a low-grade fever. Also called benign inoculation lymphoreticulosis, cat scratch fever. (5 samples), pneumonia caused by Chlamydia pneumoniae Chlamydia pneumoniae C psittaci TWAR A pathogen that causes pneumonia, asymptomatic RTIs, pharyngitis, otitis media (5 samples), C. psittaci (5 samples), Mycoplasma pneumoniae Mycoplasma pneu·mo·ni·ae n. A microorganism causing primary atypical pneumonia in humans. (10 samples), L. pneumophila (10 samples), hepatitis C virus
A technique developed in 1979 that is used to confirm ELISA results. HIV antigen is purified by electrophoresis and attached by blotting to a nylon or nitrocellulose filter. were performed as previously described (29) for any patient with a seroconversion. DNA was extracted from BAL samples by using QIAMP Tissue kit (QIAGEN, Hilden, Germany), according to the manufacturer's instructions. PCR detection was attempted on all BAL samples for bacteria against which at least one seroconversion was generated. DNA extraction from serum samples was performed in a laboratory other than the one in which the isolates were identified to avoid vertical contamination from previous amplifications, and no positive control was used to avoid horizontal contamination from the same experiment (16). We used a nested PCR that incorporated two primer pairs used only once (Table 2) followed by sequencing and comparison to the targeted sequence, as previously described for suicide-PCR (15,16). All samples were tested the same day in the same assay. Sample testing was blinded, and positive amplicons were sequenced. Negative controls consisted of BAL samples from 10 patients of the same ICU obtained at admission, BAL samples from 200 patients with nosocomial pneumonia hospitalized in other medical centers of the city, water samples, and a suspension of A. polyphaga. At least one negative control was used for every two serum samples. Comparisons of demographic, clinical, and laboratory data between patients with evidence of amoeba-associated bacteria contact (seroconversion or positive detection in BAL samples) were performed by using chi square chi square (kī), n a nonparametric statistic used with discrete data in the form of frequency count (nominal data) or percentages or proportions that can be reduced to frequencies. and Mann-Whitney tests, respectively. The tested variables were age; sex; an underlying disease; severity score; intubation duration; hospitalization duration; SIRS; death; increase of hepatic enzymes, platelet count, and leukocytes; VAP; and fever. We also compared demographic, clinical, and laboratory data between patients with and without unexplained VAP, fever, and SIRS. Multivariate analysis multivariate analysis, n a statistical approach used to evaluate multiple variables. multivariate analysis, n a set of techniques used when variation in several variables has to be studied simultaneously. adjusted for age, sex, prolonged intubation, and an underlying disease was performed to confirm observed associations. STATA software (v. 7.0, Stata Corporation, College Station, TX) was used for analysis. Results Ten species (310 isolates) were identified from 864 water samples (Table 3). B. massiliensis and L. anisa were the two most commonly isolated species (62.3% of the 310 isolates). In the ICU admission rooms , isolation of L. anisa ranged from 75% to 100% of the tested taps during the first 20 weeks; whereas all were negative during the last 6 weeks, after taps were changed. No amoeba-associated bacteria were isolated from BAL. Ninety serum samples from the 30 patients and the 214 control serum samples were tested by an immunofluorescence assay for IgG and IgM on the 20 amoeba-associated bacteria antigens (12,160 tests). The 30 first serum samples and the samples from blood donors did not have an IgG titer of [greater than or equal to] 1:50 or IgM titer [greater than or equal to] 1:25. Cutoff titers for positive serologic tests with 100% specificity are shown in Table 4. Twelve (40%) patients seroconverted from 10 to 35 days after admission to at least one antigen; 10 showed IgM antibodies (Table 5). Five patients seroconverted to L. anisa, six to B. massiliensis, including one to both, one to L. quinlivanii, and one to A. broomeae. Western blots confirmed the seroconversions, with the appearance of several reacting bands on convalescent-phase serum samples (Figure). Patients also seroconverted to amoeba-associated bacteria not detected in the water in this study: two to A. clevelandensis (patient 2, IgG=1:100 and IgM=1:100; patient 8, IgG=1:50 and IgM=1:200;) and two to A. felis (patient 2, IgG=1:100 and IgM=1:100; patient 9, IgG=1:1600 and IgM:1:25). Seroconversions were significantly more frequent against amoeba-associated bacteria obtained in this ICU than against amoeba-associated bacteria isolated in previous studies: 13 of 300 tests versus 4 of 300 tests and 12 of 30 patients versus 4 of 30 patients (p=0.046 and p=0.039, respectively). Patients also seroconverted more frequently to the most commonly isolated bacteria, L. anisa and B. massiliensis (>50 isolates, p=0.021). [FIGURE OMITTED] Table 6 shows the clinical characteristics of patients with serologic se·rol·o·gy n. pl. se·rol·o·gies 1. The science that deals with the properties and reactions of serums, especially blood serum. 2. evidence of exposure to amoeba-associated bacteria isolated in the ICU. Analysis for risk and potential confounding factors did not indicate differences between patients with or without seroconversion. However, seroconversion was statistically associated with VAP (p=0.026), unexplained VAP (p=0.034), SIRS (p=0.024), and unexplained SIRS (p=0.045). Multivariable logistic regression demonstrated that seroconversion was independently associated with VAP even after we adjusted for intubation duration, hospitalization duration, number of serum samples, and underlying disease (p=0.014 to 0.030). The DNA of L. anisa and B. massiliensis were each detected once in the 66 BAL samples from 30 patients. For two samples, seroconversion to the identified bacteria, L. anisa and B. massiliensis, respectively, was observed 4 and 2 weeks after the PCR was positive in BAL. None of the 210 control patients was positive for these bacteria in BAL samples compared to 2 of 30 patients in the ICU (p<0.01). The death rate was 33.3%; disease was mainly associated with fever (96.6%), VAP (56.6%), and SIRS (76.6%). No microbial microbial pertaining to or emanating from a microbe. microbial digestion the breakdown of organic material, especially feedstuffs, by microbial organisms. etiologic agent was found in 18 (62%) of 29 patients with fever, 10 (43%) of 23 patients with SIRS, and in 8 (47%) of 17 patients with VAP. VAP was significantly associated with duration of hospitalization (median hospitalization days/interquartile range of 23/18-41 with VAP versus 14/10-21 without VAP, p=0.04), SIRS (16/17 with VAP versus 7/13 without VAP, p=0.025) and seroconversion to amoeba-associated bacteria (10/17 with VAP versus 2/13 without VAP, p:0.026). No other statistical difference was observed between patients with VAP and without VAP in terms of demographic, clinical, and paraclinical paraclinical /para·clin·i·cal/ (-klin´i-k'l) pertaining to abnormalities (e.g., morphological or biochemical) underlying clinical manifestations (e.g., chest pain or fever). paraclinical pertaining to abnormalities (e.g. data, risks, and potential confounding factors. Most patients received cephalothin cephalothin a first generation cephalosporin antibiotic. Sensitive organisms include many penicillin-resistant staphylococci. cephalothin Cefalotin® Infectious disease A parenteral semisynthetic derivative of cephalosporin C, and 3 for the first 3 days of hospitalization as an antibiotic prophylaxis. The most commonly used antibiotics in patients with VAP were third-generation cephalosporins Cephalosporins Definition Cephalosporins are medicines that kill bacteria or prevent their growth. Purpose Cephalosporins are used to treat infections in different parts of the body—the ears, nose, throat, lungs, sinuses, and . Patients with VAP received antibiotics more frequently and for more than 1 week (16/17 with VAP versus 7/13 without VAP, p=0.025). Discussion We confirmed that several amoeba-associated bacteria are common in the water in ICU; we recovered 310 amoeba-associated bacteria isolates from 10 species from the water of the ICU. As exposure to a microorganism microorganism /mi·cro·or·gan·ism/ (-or´gah-nizm) a microscopic organism; those of medical interest include bacteria, fungi, and protozoa. is a prerequisite to infectious disease Infectious disease A pathological condition spread among biological species. Infectious diseases, although varied in their effects, are always associated with viruses, bacteria, fungi, protozoa, multicellular parasites and aberrant proteins known as prions. , we first evaluated contact of patients hospitalized in the ICU with amoeba-associated bacteria in water. We found that 12 (40%) of 30 of patients seroconverted to amoeba-associated bacteria and that these seroconversions were significantly more common against local isolates than to amoeba-associated bacteria from other ICUs. Moreover, antibody response parallels that of water contamination with B. massiliensis and L. anisa, which cause 83% of seroconversions identified in 62% of isolates (p=0.021). The cutoff titers, chosen to have 100% specificity, and the detection of several reactive antigens in the Western blots (Figure) suggest that these seroconversions represent specific serologic reactions. Detection of antibodies reacting to amoeba amoeba: see ameba. amoeba One-celled protozoan that can form temporary extensions of cytoplasm (pseudopodia) in order to move about. Some amoebas are found on the bottom of freshwater streams and ponds. antigens would also be important because infections could occur through inhalation (perhaps after colonization) of infected amoebae acting as a "Trojan horse" (6). In future studies, isolation of amoebae in the aquatic environment as in the BAL samples of patients will be performed for further use as antigens. Patient exposure to amoeba-associated bacteria from the ICU was also evident in results of amoeba-associated bacteria DNA detection in BAL samples from 2 of 30 patients as compared with 0 of 210 control patients (p<0.01). Moreover, for these patients, bacterial DNA was detected in the BAL sample before the seroconversion to the same bacteria 2 to 4 weeks after admission. This rate is compatible with an acute infection occurring during hospitalization rather than colonization of the respiratory tracts of patients. Contamination is unlikely when using a suicide-PCR procedure (15,16). Isolation of these agents was probably hampered by the antibiotic prophylaxis instituted at admission in this ICU for trauma patients and likely explains the lack of amoeba-associated bacteria isolation in BAL samples. Among the 30 patients, VAP occurred frequently (56.6%) and was associated with hospitalization duration, as previously reported (30,31). Of the patients with VAP, 58.8% seroconverted to amoeba-associated bacteria, as compared to 15.4% of the remaining 13 patients (p=0.026). In patients with seroconversion, SIRS was also more prevalent (p=0.024). The percentages of unexplained VAP and unexplained SIRS were four times more common in amoeba-associated bacteria seroconverters than in nonseroconverters and remained statistically significant in spite of the small population studied (Table 6). Thus, amoeba-associated bacteria may be a common cause of unexplained VAP and SIRS. Finally, we identified a cryptic outbreak in the ICU caused by L. anisa, a pathogen commonly encountered in the environment (32,33), only implicated in a few epidemics of Pontiac fever (34,35) and four cases of legionellosis (26,36-38). Five (16.7%) of 30 patients were infected with this bacterium, considered a relatively rare pathogen. Serologic tests are not currently used for L. anisa, and no urinary antigen test is available. Therefore, diagnosis based only on isolation may explain why L. anisa is so rarely reported. However, its absence in the BAL samples from the 200 patients from other ICUs shows that local epidemiology plays a major role. This study confirms that L. anisa is common in the environment (32,33). Members of the Bosea genus are gram-negative, oxidase-positive, catalase-positive rods belonging to the [alpha]-2 subgroup of Proteobacteria. All are motile mo·tile adj. 1. Moving or having the power to move spontaneously. 2. Of or relating to mental imagery that arises primarily from sensations of bodily movement and position rather than from visual or auditory sensations. . They grow well on BCYE agar from 25[degrees]C to 37[degrees]C but do not grow or grow weakly on Columbia agar with 5% sheep blood. Colonies are smooth, mucoid mucoid /mu·coid/ (mu´koid) 1. resembling mucus. 2. mucinoid. mu·coid n. Any of various glycoproteins similar to the mucins, especially a mucoprotein. adj. , round, and cream colored and are urease urease /ure·ase/ (u´re-as) an enzyme that catalyzes the hydrolysis of urea to ammonia and carbon dioxide; it is a nickel protein of microorganisms and plants that is used in clinical assays of plasma urea concentrations. positive and [alpha]-hemolytic on Columbia agar with 5% sheep blood and 0.2% yeast extract. B. massilensis are negative in assays for arginine arginine (är`jənĭn), organic compound, one of the 20 amino acids commonly found in animal proteins. Only the l-stereoisomer participates in the biosynthesis of proteins. dihydrolase activity, esculin and gelatin gelatin or animal jelly, foodstuff obtained from connective tissue (found in hoofs, bones, tendons, ligaments, and cartilage) of vertebrate animals by the action of boiling water or dilute acid. hydrolysis hydrolysis (hīdrŏl`ĭsĭs), chemical reaction of a compound with water, usually resulting in the formation of one or more new compounds. , [beta]-galactosidase activity, maltose assimilation, and acid production by fermentation or oxidation of substrates tested in API 50 CH (Biomerieux, Marcy l'etoile, France), especially D-glucose, D-fructose, D-mannose, and sucrose. The species of the Bosea genus have high MICs to penicillin and amoxicillin amoxicillin /amox·i·cil·lin/ (ah-mok?si-sil´in) a semisynthetic derivative of ampicillin effective against a broad spectrum of gram-positive and gram-negative bacteria. a·mox·i·cil·lin n. and low MICs to doxycycline doxycycline /doxy·cy·cline/ (dok?se-si´klen) a semisynthetic broad-spectrum tetracycline antibiotic, active against a wide range of gram-positive and gram-negative organisms; used also as d. calcium and d. hyclate. (13). In co-culture with A. polyphaga, B. vestrisii, B. eneae, and B. massiliensis are phagocyted and form progressively large vacuoles that lead to amoebal lysis lysis /ly·sis/ (li´sis) 1. destruction or decomposition, as of a cell or other substance, under influence of a specific agent. 2. mobilization of an organ by division of restraining adhesions. 3. ; however, they have never been reported as pathogenic agents before. As B. massiliensis has not been tentatively isolated elsewhere, whether our findings reflect a local phenomenon or whether the bacterium is widely encountered is not known. We think that our data support the role of B. massiliensis in severe VAP, but confirmation is needed to definitely establish a role. Our study indicates that most patients with VAP received [beta]-lactam agents, mainly amoxicillin-davulanic acid and third-generation cephalosporin cephalosporin (sĕf'əlōspôr`ĭn), any of a group of more than 20 antibiotics derived from species of fungi of the genus Cephalosporium and closely related chemically to penicillin. Cephalosporins, e.g. . These antibiotics may have inhibited bacterial culture, which explains why no amoeba-associated bacteria were isolated from BAL samples. B. massiliensis has low MICs ([less than or equal to] 0.5 mg/L) to ceftriaxone ceftriaxone /cef·tri·ax·one/ (cef?tri-ak´son) a semisynthetic, ß–resistant, third-generation cephalosporin effective against a wide range of gram-positive and gram-negative bacteria, used as the sodium salt. , doxycycline, rifampin rifampin (rĭfăm`pĭn), antibiotic used in the treatment of tuberculosis. It is also used to eliminate the meningococcus microorganism from carriers and to treat leprosy, or Hansen's disease. , and erythromycin erythromycin (ĭrĭth'rōmī`sĭn), any of several related antibiotic drugs produced by bacteria of the genus Streptomyces (see antibiotic). (13). However, [beta]-lactam agents are also active in vitro on Legionella spp., but animal models and clinical studies have demonstrated their inefficacy in·ef·fi·ca·cy n. The state or quality of being incapable of producing a desired effect or result. Noun 1. inefficacy - a lack of efficacy inefficaciousness in the treatment of legionellosis (39). The results of our study confirm that the bacteriologic bac·te·ri·ol·o·gy n. The study of bacteria, especially in relation to medicine and agriculture. bac·te tests of hospital water supplies is largely ignored. Our work demonstrates that patients are exposed specifically to the most common water amoeba-associated bacteria in their environment, as evidenced by seroconversion against these bacteria and DNA of these bacteria in BAL samples. The route of infection, even if caused by aerosols generated in the ICU, remains unclear. Patients of this ICU sometime receive water through nasogastric tubes but only bottled, sterile water. However, we cannot exclude mistakes caused by not following recommended procedures. Patients for whom exposure to these bacteria is supported by seroconversion or DNA detection in BAL samples have unexplained VAP and SIRS more commonly. We speculate that amoeba-associated bacteria in the environment of intubated patients may concurrently cause unexplained infections and cryptic outbreaks. Research of new etiologic agents of pneumonia in ICUs should be based on environmental study of each ICU since ecologic findings of amoeba-associated bacteria in water points in hospital vary.
Table 1. Definition criteria for ventilator-associated pneumonia (VAP)
and systemic inflammatory response syndrome (SIRS)
VAP SIRS
New and persistent roentgenographic At least two of:
lung infiltrate and new onset of: a) T[degrees] >38[degrees]C or
a) Increase in white blood cells <36[degrees]C
>10 g/L b) Heart rate >90/min
b) Fever or hypothermia ([greater c) Respiratory rate >20/min or
than or equal to] 38[degrees]C or PaC[O.sub.2] <32 mmHg
[less than or equal to] 36[degrees] d) Leukocytes >12 or <4 g/L or
C) immature (band) forms
c) Purulent sputum
d) Duration of at least 2 weeks
e) Pa[O.sub.2]/Fi[O.sub.2] ratio
<100
Unexplained VAP Unexplained SIRS
Lack of recovery of Lack of recovery of bacteria from:
bacteria from: a) Lung secretions
a) Lung secretions b) Blood cultures
b) Blood cultures c) Urine
Table 2. Polymerase chain reaction primers used for amplification and
sequencing of bacterial DNA within human samples
Bosea-related
Primers strain Legionella anisa Afipia broomeae
External forward 5'-TGCGAGTGTA 5'-TATTGGTGC 5'-TCTTTTGTGCG
GAGGTGAAATT-3' TGATTTAGGAA-3' GGAAGATAATG-3'
External reverse 5'CGCTCGTTG 5'-GCTAAGTCTGAA 5'-TAAACTTTCCAA
CGGGACTTAA-3' GGTACA-3' CGGCTGGCAT-3'
Internal forward 5'-GAGGTGAAA 5'-GCCCAATTG 5'-GCTAACTTCGT
TTCGTAGATATT-3' ATTTTGACAG-3' GCCAGCAG-3'
Internal reverse 5'-GAGCTGACG 5'-GCATTAATTGT 5'-GTTTGCTCC
ACAGCCAT-3' AATGCTTCA-3' CCACGCTTTC-3'
Primers L. quinlivanii
External forward 5'-TTGTTGATGTTT
GTTTTGAGACC-3'
External reverse 5'-TTCAACACTTCT
TTCATCTGATC-3'
Internal forward 5'-TCCAAGAATAA
AAGGGGATTG-3'
Internal reverse 5'-CCATACCAT
CCTGTAAGCCTT-3'
Table 3. Identification of the 310 bacterial strains isolated by
using amoebal co-culture procedure
Species No. of isolates
Legionella anisa 126
Bosea massiliensis 67
Rasbo bacterium 45
Bradyrhizobium liaoningense 29
L. quinlivanii 12
L. pneumophila 11
L. rubrilucens 7
L. worsleiensis 6
B. japonicum 5
Afipia broomeae 2
Table 4. Definition of cutoff titers for positive serologic tests and
100% specificity according to antigen tested by using the 224
control serum samples (a)
Antigen IgG IgM
Legionella anisa [greater than [greater than
or equal to] 1:50 or equal to] 1:25
Bosea massiliensis [greater than [greater than
or equal to] 1:50 or equal to] 1:25
Rasbo bacterium [greater than [greater than
or equal to] 1:100 or equal to] 1:25
Bradyrhizobium liaoningense [greater than [greater than
or equal to] 1:50 or equal to] 1:25
L. quinlivanii [greater than [greater than
or equal to] 1:100 or equal to] 1:25
L. pneumophila [greater than [greater than
or equal to] 1:50 or equal to] 1:25
L. rubrilucens [greater than [greater than
or equal to] 1:200 or equal to] 1:25
L. worsleiensis [greater than [greater than
or equal to] 1:200 or equal to] 1:25
B. japonicum [greater than [greater than
or equal to] 1:100 or equal to] 1:25
Afipia broomeae [greater than [greater than
or equal to] 1:200 or equal to] 1:25
Bosea eneae [greater than [greater than
or equal to] 1:800 or equal to] 1:25
B. vestrisii [greater than [greater than
or equal to] 1:100 or equal to] 1:25
B. thiooxydans [greater than [greater than
or equal to] 1:50 or equal to] 1:25
Mesorhizobium amorphae [greater than [greater than
or equal to] 1:100 or equal to] 1:25
Azorhizobium caulinodans [greater than [greater than
or equal to] 1:100 or equal to] 1:25
Afipia felis [greater than [greater than
or equal to] 1:100 or equal to] 1:25
A. felis genospecies A [greater than [greater than
or equal to] 1:100 or equal to] 1:25
A. clevelandensis [greater than [greater than
or equal to] 1:100 or equal to] 1:25
A. birgiae [greater than [greater than
or equal to] 1:50 or equal to] 1:25
A. massiliae [greater than [greater than
or equal to] 1:50 or equal to] 1:25
(a) Ig, immunoglobulin.
Table 5. Antibody titers of 12 serum samples with seroconversion to at
least one of the bacteria isolated in the intensive care unit
Bosea Legionella L.
massiliensis anisa quinlivanii
Wk of
Case sampling IgG IgM IgG IgM IgG IgM
1 (a) 1 <1:50 <1:25
4 1:50 1:100
7 1:800 1:50
2 (a) 1 <1:50 <1:25
3 1:400 1:100
7 1 <1:50 <1:25
3 <1:50 1:200
8 1 <1:50 <1:25
3 1:200 1:800
9 1 <1:50 <1:25 <1:50 <1:25
3 1:400 1:50 1:50 1:400
5 1:50 1:25 1:800 1:50
11 1 <1:50 <1:25
5 1:50 1:50
12 1 <1:50 <1:25
3 1:400 1:50
13 1
3
5
7
19 1 <1:50 <1:25
3 1:400 <1:25
22 1 <1:50 <1:25
3 1:200 1:50
23 1 <1:50 <1:25
5 1:400 1:25
28 1 <1:50 <1:25
3 1:400 1:25
5 1:200 1:25
Afipia
broomeae
Wk of
Case sampling IgG IgM
1 (a) 1
4
7
2 (a) 1
3
7 1
3
8 1
3
9 1
3
5
11 1
5
12 1
3
13 1 <1:50 <1:25
3 1:50 <1:25
5 1:100 <1:25
7 1:200 <1:25
19 1
3
22 1
3
23 1
5
28 1
3
5
(a) Patients with positive PCR results in bronchoalveolar lavage
samples (patient 1, L. anisa; Patient 2, B. massiliensis); Ig,
immunoglobulin. All patients were sampled at admission (wk 1); titers
in bold are those greater than or equal to defined cutofftiters (Table
4).
Table 6. Clinical characteristics of patients with or without
seroconversion to one of the amoeba-associated bacteria (a)
No
Seroconversion seroconversion
Clinical characteristics (N= 12) (N= 18) p value
Demographic data
Median age in y (IQR) 35 (25-43) 24 (21-52) 0.85
Male (%) 10 (83.3) 15 (83.3) 1
Risk and potential
confounding factors
Underlying disease (%) 2 (16.6) 3 (16.6) 1
Circulation injury (%) 9 (75) 14 (77.8) 1
Median APACHE II (a) score 21 (14-4) 23 (16-34) 0.12
(IQR)
Intubation in ICU (%) 8 (66.6) 7 (38.9) 0.26
Median hospitalization 25 (19-41) 17 (10-23) 0.094
days (IQR)
Median intubation 11 (7-20) 11 (7-20) 0.8
duration in days (IQR)
Median number of serum 3 (3-5) 3 (2-4) 0.12
samples (IQR)
Clinical data
VAP (%) 10 (83.3) 7 (38.9) 0.026
Unexplained VAP (%) 6 (50) 2 (11.1) 0.034
Fever [greater than or 12 (100) 17 (84.4) 1
equal to] 38.5
[degrees]C (%)
Unexplained fever (%) 7 (58.3) 11 (39.3) 0.27
SIRS (%) 12 (100) 11 (61.1) 0.024
Unexplained SIRS (%) 7 (58.3) 3 (14.3) 0.045
Death (%) 2 (16.7) 8 (44.4) 0.23
Paraclinical data
Leukocytes > 12 g/L (%) 12 (100) 14 (77.8) 0.13
Platelets > 500 g/L (%) 5 (41.7) 6 (33.3) 0.7
PCR detection of ARB in 2 (17) 0 0.15
BAL samples(%)
(a) IQR, interquartile range; VAP, ventilator-associated pneumonia;
SIRS, Systemic Inflammatory Response Syndrome; APACHE II, Acute
Physiology and Chronic Health Evaluation II; PCR, polymerase chain
reaction; ARB, angiotensin receptor blockers; BAL, bronchoalveolar
lavage samples; bold p values are those that are significant (<0.05).
Acknowledgments The authors are indebted to Lina Barrassi for technical help and Kelly Johnston and John Dumler for reviewing the manuscript. This work was supported by the Programme Hospitalier de Recherche Clinique. References (1.) Wenzel RP. Hospital-acquired pneumonia: overview of the current state of the art for prevention and control. Eur J Clin Microbiol Infect Dis 1989;8:56-60. (2.) Marrie TJ, Durant H, Yates L. Community-acquired pneumonia requiring hospitalization: 5-year prospective study. Rev Infect Dis 1989; 11:586-99. (3.) Rutala WA, Weber DJ. Water as a reservoir of nosocomial nosocomial /noso·co·mi·al/ (nos?o-ko´me-il) pertaining to or originating in a hospital. nos·o·co·mi·al adj. 1. Of or relating to a hospital. 2. pathogens. Infect Control Hosp Epidemiol 1997;18:609-16. (4.) Rowbotham TJ. Preliminary report on the pathogenicity of Legionella pneumophila for freshwater and soil amoebae. J Clin Pathol 1980;33:1179-83. (5.) Michel R, Hauroder B. Isolation of an Acanthamoeba strain with intracellular Burkholderia pickettii infection. Zentralbl Bakteriol 1997;285:541-57. (6.) Barker J, Brown MRW (Mount Rainier ReWritable) See Mount Rainier. . Trojan horses of the microbial world: protozoa and the survival of bacterial pathogens in the environment. Microbiology 1994;140:1253-9. (7.) Steenbergen JN, Shuman HA, Casadevall A. Coptococcus neoformans interactions with amoebae suggest an explanation for its virulence and intracellular pathogenic strategy in macrophages Macrophages White blood cells whose job is to destroy invading microorganisms. Listeria monocytogenes avoids being killed and can multiply within the macrophage. . Proc Natl Acad Sci USA 2001;98:15245-50. (8.) Stout JE, Yu VL. Legionellosis. N Engl J Med 1997;337:682-7. (9.) Marrie TJ, Raoult D, La Scola B, Birtles RJ, de Carolis E. Legionella-like and other amoebal pathogens as agents of community-acquired pneumonia. Emerg Infect Dis 2001;7:1026-9. (10.) Greub G, Raoult D. Parachlamydiaceae potential emerging pathogens. Emerg Infect Dis 2002;8:625-30. (11.) La Scola B, Barrassi L, Raoult D. Isolation of new fastidious fas·tid·i·ous adj. 1. Possessing or displaying careful, meticulous attention to detail. 2. Difficult to please; exacting. 3. Having complex nutritional requirements. Used of microorganisms. [alpha] Proteobacteria and Afipia felis from hospital water supplies by direct plating and amoebal co-culture procedures. FEMS Microbiol Ecol 2000;34:129-37. (12.) La Scola B, Mallet MN, Grimont PAD, Raoult D. Description of Afipia birgiae sp. nov., Afipia massiliae sp. nov. and recognition of Afipia fells genospecies A. Int J Syst Evol Microbiol 2002:52:1773-82. (13.) La Scola B, Mallet MN, Grimont PAD, Raoult D. Bosea eneae sp. nov., Bosea massiliensis sp. nov. and Bosea vestrisii sp. nov., isolated from water supplies, and emendation e·men·da·tion n. 1. The act of emending. 2. An alteration intended to improve: textual emendations made by the editor. Noun 1. of the genus Bosea (Das 1996). lnt J Syst Evol Microbiol. In press 2003. (14.) La Scola B, Mezi L, Auffray JP, Berland Y, Raoult D. Intensive care unit patients are exposed to amoeba associated pathogens. Infect Control Hosp Epidemiol 2002;23:462-5. (15.) Raoult D, Aboudharam G, Crubezy E, Larrouy G, Ludes B, Drancourt M. Molecular identification by "suicide PCR" of Yersinia pestis as the agent of Medieval Black Death. Proc Natl Acad Sci U S A 2000;97:12800-3. (16.) Raoult D, Fournier PE, Fenollar F, Jensenius M, Prioe T, de Pina JJ, et al. Rickettsia rickettsia (rĭkĕt`sēə), any of a group of very small microorganisms, many disease-causing, that live in vertebrates and are transmitted by bloodsucking parasitic arthropods such as fleas, lice (see louse), and ticks. africae, a tick-borne pathogen in travelers to sub-Saharan Africa. N Engl J Med 2001;344:1504-10. (17.) A'Court CH, Garrard CS, Crook D, Bowler L, Conlon C, Peto T, et al. Microbiologic lung surveillance in mechanically ventilated ven·ti·late tr.v. ven·ti·lat·ed, ven·ti·lat·ing, ven·ti·lates 1. To admit fresh air into (a mine, for example) to replace stale or noxious air. 2. patients using non-directed bronchial lavage and quantitative culture. Q J Med 1993;86:635-48. (18.) Kollef MH, Bock KR, Richards RD, Hearns ML. The safety and diagnostic accuracy of minibronchoalveolar lavage in patients with suspected ventilator-associated pneumonia. Ann Intern Med 1995; 122:743-8. (19.) Sanchez-Nieto JM, Torres A, Garcia-Cordoba F, El Ebiary M, Carillo A, Ruiz J, et al. Impact of invasive and non-invasive quantitative culture sampling on outcome of ventilator-associated pneumonia: a pilot study. Am J Respir Crit Care Med 1998;157:371-6. (20.) Knaus WA, Draper EA, Wagner DP, Zimmerman JE. APACHE II: a severity of disease classification system. Crit Care Med 1985;13:818-29. (21.) Reisner BS, Woods GL, Thomson RB Jr, Larone DH, Garcia LS, Shimizu RY. Specimen processing. In: Murray PR, Baron EJ, Pfaller MA, Tenover FC, Yolken RH, editors. Manual of clinical microbiology. 7th ed. Washington: American Society for Microbiology The American Society for Microbiology (ASM) is a scientific organization, based in the United States although with over 43,000 members throughout the world. It is the largest single life science professional organization and its members include those whose interests encompass basic ; 1999. p. 64-104. (22.) Kollef MH. Ventilator-associated pneumonia, a multivariate analysis. JAMA JAMA abbr. Journal of the American Medical Association 1993;270:1965-70. (23.) Salata RA, Lederman MM, Shlaes DM, Jacobs MR, Eckstein E, Tweardy D, et al. Am Rev Respir Dis 1987;135:426-32. (24.) American Thoracic Society American Thoracic Society (ATS ), established in 1905, is an independently incorporated, international, educational and scientific society, serving its 18,000 members world-wide who are dedicated in respiratory and critical care medicine. . Hospital-acquired pneumonia in adults: diagnosis, assessment of severity, initial antimicrobial therapy, and preventive strategies. Am J Respir Crit Care Med 1996; 153:1711-25. (25.) Bone RC, Balk balk the action of a horse when it refuses to obey a command to which it usually responds. See also jibbing. RA, Cerra FB, Dellinger RP, Fein AM, Knaus WA, et al. Definitions for sepsis and organ failure and guidelines for the use of innovative therapies in sepsis. Chest 1992; 101:1644-55. (26.) La Scola B, Mezi L, Weiller PJ, Raoult D. Isolation of Legionella anisa using an amoebal coculture procedure. J Clin Microbiol 2001;39:365-6. (27.) Drancourt M, Bollet C, Carlioz A, Martelin R, Gayral JP, Raoult D. 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable Adj. 1. unidentifiable - impossible to identify identifiable - capable of being identified bacterial isolates. J Clin Microbiol 2000;38:3623-30. (28.) Ratcliff RM, Lanser JA, Manning PA, Heuzenroeder MW. Sequence-based classification scheme for the genus Legionella targeting the mip gene. J Clin Microbiol 1998;36:1560-7. (29.) La Scola B, Rydkina L, Ndihokubwayo JB, Vene S, Raoult D. Serological serological pertaining to or emanating from serology. serological test one involving examination of blood serum usually for antibody. differentiation of murine typhus and epidemic typhus using cross-adsorption and Western blotting. Clin Diagn Lab Immunol 2000;7:612-6. (30.) George DL, Falk PS, Wunderink RG, Leeper KVJ, Meduri GU, Steere EL, et al. Epidemiology of ventilator-acquired pneumonia based on protected bronchosopic sampling. Am J Respir Crit Care Med 1998;158:1839-47. (31.) Vincent JL, Bihari DJ, Suter PM, Bruining HA, White J, Nicolas-Chanoin MH, et al. The prevalence of nosocomial infection in intensive care units in Europe. JAMA 1995;274:639-44. (32.) Gorman GW, Feeley JC, Steigerwalt A, Edelstein PH, Moss CW, Brenner DJ. Legionella anisa: a new species of Legionella isolated from potable potable /pot·a·ble/ (po´tah-b'l) fit to drink. po·ta·ble adj. Fit to drink; drinkable. potable fit to drink. waters and a cooling tower. Appl Environ Microbiol 1985;49:305-9. (33.) Bornstein N, Vieilly C, Marmet D, Surgot M, Fleurette J. Isolation of Legionella anisa from a hospital hot water system. Eur J Clin Microbiol 1985;4:327-30. (34.) Fenstersheib MD, Miller M, Diggins C, Liska S, Detwiler L, Werner SB, et al. Outbreak of Pontiac fever due to Legionella anisa. Lancet 1990;336:35-7. (35.) Fields BS, Barbaree JM, Sanden GN, Morrill WE. Virulence of Legionella anisa strain associated with Pontiac fever: an evaluation using protozoan protozoan (prō'təzō`ən), informal term for the unicellular heterotrophs of the kingdom Protista. Protozoans comprise a large, diverse assortment of microscopic or near-microscopic organisms that live as single cells or in simple , cell culture, and guinea pig models. Infect Immun 1990;58:3139-42. (36.) Bornstein N, Mercatello A, Marmet D, Surgot M, Deveaux Y, Fleurette J. Pleural Pleural Pleural refers to the pleura or membrane that enfolds the lungs. Mentioned in: Pneumothorax pleural emanating from or pertaining to the pleura. infection caused by Legionella anisa. J Clin Microbiol 1989;27:2100-1. (37.) Thacker WL, Benson RF, Hawes L, Mayberry WR, Brenner DJ. Characterization of a Legionella anisa strain isolated from a patient with pneumonia. J Clin Microbiol 1990;28:122-3. (38.) Fallon RJ, Stack BH. Legionnaires Legionnaires may refer to:
(39.) Vergis EN, Yu VL. Legionella species. In: Yu VL, Merigan TC Jr, Barriere SL, editors. Antimicrobial therapy and vaccines. Baltimore (MD): Williams & Wilkins; 1999. p. 257-72. Address for correspondence: Didier Raoult, Unite des Rickettsies, CNRS CNRS Centre National de la Recherche Scientifique (National Center for Scientific Research, France) CNRS Centro Nacional de Referencia Para El Sida (Argentinean National Reference Center for Aids) UMR UMR Unite Mixte de Recherche (French: Mixed Unit of Research ) UMR University of Missouri - Rolla UMR Upper Mississippi River UMR Uniform Methods and Rules (US Department of Agriculture) UMR Unit Manning Report 6020, Faculte de Medecine, 27 Boulevard Jean Moulin, 13385 Marseille Cedex 05, France; fax: 33(0)4.91.83.03.90; email: Didier.Raoult@medecine.univ-mrs.fr Bernard La Scola, * Ioanna Boyadjiev, * ([double dagger]) Gilbert Greub, * Atieh Khamis,* Claude Martin, ([double dagger]) and Didier Raoult * ([double dagger]) * Unite des Rickettsies, Marseille, France; and ([double dagger]) Hopital Nord, Marseille, France Dr. La Scola is associate professor at Marseilles Medicine Faculty. He is a member of the Unite des Rickettsies (CNRS UMR 6020, World Health Organization reference center for rickettsiae and rickettsial diseases). His fields of interest are isolation and description of fastidious bacteria, including Coxiella, Rickettsia, Bartonella, Tropheryma, and amoeba-associated bacteria. |
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