Allozyme identification of mussels (Bivalvia: Mytilus) on the pacific coast of South America.ABSTRACT The taxonomic tax·o·nom·ic also tax·o·nom·i·cal adj. Of or relating to taxonomy: a taxonomic designation. tax identity of mussels in the southern hemisphere is still unclear, and the Mytilus that inhabit in·hab·it v. in·hab·it·ed, in·hab·it·ing, in·hab·its v.tr. 1. To live or reside in. 2. To be present in; fill: Old childhood memories inhabit the attic. on the Pacific coast of South America South America, fourth largest continent (1991 est. pop. 299,150,000), c.6,880,000 sq mi (17,819,000 sq km), the southern of the two continents of the Western Hemisphere. has been considered by different authors as M. chilensis, M. edulis, M. edulis chilensis and M. galloprovincialis. To clarify the taxonomic identity of these mussels four samples from the northern limit of the distribution of Mytilus were taken as well as European control samples of M. edulis and M. galloprovincialis for comparison. Thirty allozyme loci loci [L.] plural of locus. loci Plural of locus, see there were studied and 9 loci (Aco-1, Ap-1, Est-D, Gpi, Idh-1, Lap-1, Mpi, Me-2 and Odh) were partially diagnostic between the European M. edulis and M. galloprovincialis control samples, as previously reported. Chilean samples showed for four of the above partially diagnostic loci intermediate frequencies for typical alleles of M. edulis and M. galloprovincialis between those of the control samples, but they were closer to those of M. edulis for Ap-1 and Mpi and to those of M. galloprovincialis for Aco-1 and Est-D. The locus Lap-1 showed allele frequencies allele frequency The percentage of a population of a species that carries a particular allele on a given chromosome locus. similar to those of M. edulis, whereas the most frequent allele allele (əlēl`): see genetics. allele Any one of two or more alternative forms of a gene that may occur alternatively at a given site on a chromosome. of the loci Gpi, Idh-1 and Odh was that typical of M. galloprovincialis but at a higher frequency. Moreover, the partially diagnostic loci Me-2 and Lap-2, Pgm-2 and Pp showed important differences with regard to the control populations. Genetic distances, dendrograms and multidimentional scaling as well as principal component analysis on allele frequencies and factorial factorial For any whole number, the product of all the counting numbers up to and including itself. It is indicated with an exclamation point: 4! (read “four factorial”) is 1 × 2 × 3 × 4 = 24. correspondence analysis on individual genotypes showed that South American samples were genetically closer to European M. galloprovincialis than to M. edulis but having particular and characteristic allele frequencies. KEY WORDS: allozyme polymorphisms, mussel mussel, edible freshwater or marine bivalve mollusk. Mussels are able to move slowly by means of the muscular foot. They feed and breathe by filtering water through extensible tubes called siphons; a large mussel filters 10 gal (38 liters) of water per day. , genetic structure, Mytilus, Chilean coast, taxonomic status INTRODUCTION For many years, the Years, The the seven decades of Eleanor Pargiter’s life. [Br. Lit.: Benét, 1109] See : Time taxonomy taxonomy: see classification. taxonomy In biology, the classification of organisms into a hierarchy of groupings, from the general to the particular, that reflect evolutionary and usually morphological relationships: kingdom, phylum, class, order, of individuals belonging to the genus genus, in taxonomy: see classification. genus Biological classification. It ranks below family and above species, consisting of structurally or phylogenetically (see Mytilus (Mollusca: Bivalvia) has been subject to controversy, because the accurate establishment of the taxonomic status of their members has proved to be difficult (Soot-Ryen 1955, McDonald et al. 1991, Gosling 1992a, 1992b). Initial taxonomic studies on this group were based on shell characteristics, but the high phenotypic plasticity The ability of an organism with a given genotype to change its phenotype in response to changes in the environment is called phenotypic plasticity. Such plasticity in some cases expresses as several highly morphologically distinct results; in other cases, a continuous norm of and the diversity of environments, where this group inhabits, have generated unclear identifications (Soot-Ryen 1955, Gosling & McGrath 1990, Koehn 1991, Gardner 1992, Gosling 1992a, 1992b, Seed 1992). The Mytilus on the Pacific coast of South America is distributed from Latitude latitude, angular distance of any point on the surface of the earth north or south of the equator. The equator is latitude 0°, and the North Pole and South Pole are latitudes 90°N and 90°S, respectively. 40[degrees] South (Valdivia) to Latitude 60[degrees] South (Cape Horn Noun 1. Cape Horn - a rocky headland belonging to Chile at the southernmost tip of South America (south of Tierra del Fuego) Chile, Republic of Chile - a republic in southern South America on the western slopes of the Andes on the south Pacific coast , approximately), and it has been named in different ways (Osorio & Bahamonde 1968). The name Mytilus chilensis Hupe (1854) has been one of the most used and it was included as one of the distinct species of Mytilus in the Lamy's review (1936). On the other hand, Soot-Ryen (1955) considered most of Mytilus taxa taxa: see taxon. to be subspecies subspecies, also called race, a genetically distinct geographical subunit of a species. See also classification. of M. edulis, including those described in South America as M. edulis chilensis (Pacific coast) and M. edulis platensis (Atlantic coast). Molecular tools such as allozyme polymorphisms have been useful in clarifying the systematics systematics: see classification. of the mussel genus Mytilus, mainly in the northern hemisphere where 3 taxa have been identified: M. edulis, M. galloprovincialis and M. trossulus (Koehn 1991, Gardner 1992, Gosling1992a, 1992b, Seed 1992 and references therein). On the Pacific coast of South America, allozyme loci have been studied in few samples of Mytilus. The extensive worldwide study of McDonald et al. (1991) included three samples of about 25 individuals each from this area. They studied 18 morphologic mor·phol·o·gy n. pl. mor·phol·o·gies 1. a. The branch of biology that deals with the form and structure of organisms without consideration of function. b. characters and eight allozyme loci and suggested that Mytilus populations on the Atlantic (2 samples) and Pacific (3 samples) coasts of South America could be tentatively included in M. edulis, because mussels from these samples were genetically similar to the northern hemisphere M. edulis, although characteristic alleles of the northern hemisphere M. galloprovincialis and M. trossulus were also found at high frequency at some allozyme loci. Moreover, these South American populations contained alleles that were rare or absent in the northern hemisphere. Other molecular tools, such as DNA DNA: see nucleic acid. DNA or deoxyribonucleic acid One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes. markers, have been applied to clarify several systematic aspects of the Mytilus taxa. Most of works that have studied Chilean mussels have reported that these mussels are genetically closer to M. galloprovincialis than to M. edulis. Toro Toro may refer to:
pertaining to mitochondria. mitochondrial RNAs a unique set of tRNAs, mRNAs, rRNAs, transcribed from mitochondrial DNA by a mitochondrial-specific RNA polymerase, that account for about 4% of the total cell RNA that (COIII) and two nuclear DNA Nuclear DNA , nuclear deoxyribonucleic acid (nDNA), is DNA contained within a nucleus of eukaryotic organisms. In most cases it encodes more of the genome than the mitochondrial DNA and is passed sexually rather than matrilineally. markers (ITS, Glu5') from one Chilean sample of 30 individuals, as well as several control samples of Mytilus taxa. He found the same Glu 5' pattern for the Chilean sample and the M. galloprovincialis sample from New Zealand New Zealand (zē`lənd), island country (2005 est. pop. 4,035,000), 104,454 sq mi (270,534 sq km), in the S Pacific Ocean, over 1,000 mi (1,600 km) SE of Australia. The capital is Wellington; the largest city and leading port is Auckland. and different from those of the control samples of M. edulis and M. trossulus. He concluded, in line with the view of Soot-Ryen (1955) and Gardner (1992), that the taxonomic status of the Chilean mussel corresponds to a subspecies of M. edulis, M. edulis chilensis. Daguin & Borsa (2000) analyzed an·a·lyze tr.v. an·a·lyzed, an·a·lyz·ing, an·a·lyz·es 1. To examine methodically by separating into parts and studying their interrelations. 2. Chemistry To make a chemical analysis of. 3. 2 DNA markers (Glu5' and mac-1) from 1 sample of 48 individuals from Chile and found a high genetic similarity between these mussels and the Mediterranean and North Pacific M. galloprovincialis samples. Hilbish et al. (2000) studied RFLPs and sequences of the mitochondrial 16S rRNA gene to elucidate e·lu·ci·date v. e·lu·ci·dat·ed, e·lu·ci·dat·ing, e·lu·ci·dates v.tr. To make clear or plain, especially by explanation; clarify. v.intr. To give an explanation that serves to clarify. routes and times of transequatorial migration of the Mytilus complex. Two samples from the Pacific coast of South America were included, which were closer to M. galloprovincialis than to M. edulis, and they proposed that these populations shared a common ancestor ANCESTOR, descents. One who has preceded another in a direct line of descent; an ascendant. In the common law, the word is understood as well of the immediate parents, as, of these that are higher; as may appear by the statute 25 Ed. III. De natis ultra mare, and so in the statute of 6 R. with M. galloprovincialis. Recently, Martinez-Lage et al. (2005) using satellite DNA satellite DNA n. A portion of DNA in animal cells whose density differs from that of the other DNA, consisting of short, repeating sequences of nucleotide pairs near the region of the centromere. sequences maintain that Chilean specimens are closer to M. galloprovincialis than to M. edulis. However, Rego REGO Reinventing Government REGO Renewable Energy Guarantee of Origin (UK) et al. (2002) using RAPDs have reported banding patterns of a Chilean sample closer to those of the European M. edulis than M. galloprovincialis. Moreover, the sequences of the H1 histone histone (hĭs`tōn), any of a class of protein molecules found in the chromosomes of eukaryotic cells. They complex with the DNA (see nucleic acid) and pack the DNA into tight masses of chromatin, which have the structure of coiled coils, much coding region The coding region of a gene is the portion of DNA that is transcribed into mRNA and translated into proteins. This does not include such regions as a recognition site, initiator sequence, or termination sequence, only the region that will directly code for amino acid linkage. have shown a closer relationship of Chilean mussels to M. californianus than to northern M. edulis, M. galloprovincialis and M. trossulus (Eirin-Lopez et al. 2002). Most of previous studies in Mytilus on the Pacific coast of South America involved a low number of individuals per sample, from one to three samples and between two to three DNA markers and up to eight allozyme loci. In this work we tried to improve the taxonomic identification of these mussels. The samples have been confined con·fine v. con·fined, con·fin·ing, con·fines v.tr. 1. To keep within bounds; restrict: Please confine your remarks to the issues at hand. See Synonyms at limit. to the northern limit of the Mytilus distribution because important genetic differences between north and south Chilean samples at allozyme loci (McDonald et al. 1991) and banding patterns of RAPDs (Toro et al. 2004) have been previously detected. However, a higher number of samples and individuals than previously reported were studied (four samples, with a mean of 60 individuals per sample). Moreover, a large number of allozyme loci (30 genes) were analyzed, which seems to be representative of the Mytilus genome genome: see genetics. genome all the genetic content contained within an organism. An organism's genome is made up of molecules of deoxyribonucleic acid (DNA) that form long strands that are tightly wound into chromosomes, which are found in the . MATERIALS AND METHODS Sample Collections Mussel samples (genus Mytilus) from the Pacific coast of South America, at the northern limit of their distribution, were collected from four locations between Valdivia and Quellon (Chile) (Fig. 1). Individuals were collected from the intertidal in·ter·tid·al adj. Of or being the region between the high tide mark and the low tide mark. in and subtidal zones, during February 1997 and May 1998. Samples of pure M. edulis from The Netherlands (EH) and M. galloprovincialis from Vigo (NW Iberian Peninsula Iberian Peninsula, c.230,400 sq mi (596,740 sq km), SW Europe, separated from the rest of Europe by the Pyrenees. Comprising Spain and Portugal, it is washed on the N and W by the Atlantic Ocean and on the S and E by the Mediterranean Sea; the Strait of Gibraltar ; GV) were also analyzed for comparison. Mussels were brought alive or frozen in dry ice to the laboratory and stored at -70[degrees]C prior to electrophoresis electrophoresis (ĭlĕk'trōfərē`sĭs): see colloid. electrophoresis Movement of electrically charged particles in a fluid under the influence of an electric field. analysis. [FIGURE 1 OMITTED] Allozyme Electrophoresis Horizontal gel electrophoresis gel electrophoresis n. Electrophoresis performed in a gel composed of agarose, polyacrylamide, or starch. was carried out according to according to prep. 1. As stated or indicated by; on the authority of: according to historians. 2. In keeping with: according to instructions. 3. Harris & Hopkinson (1976) and Murphy et al. (1996). A piece of digestive gland digestive gland n. A gland, such as the liver or pancreas, that secretes into the alimentary canal substances necessary for digestion. or posterior posterior /pos·ter·i·or/ (pos-ter´e-er) directed toward or situated at the back; opposite of anterior. pos·te·ri·or adj. 1. Located behind a part or toward the rear of a structure. adductor muscle Noun 1. adductor muscle - a muscle that draws a body part toward the median line adductor skeletal muscle, striated muscle - a muscle that is connected at either or both ends to a bone and so move parts of the skeleton; a muscle that is characterized by was homogenized ho·mog·e·nize v. ho·mog·e·nized, ho·mog·e·niz·ing, ho·mog·e·niz·es v.tr. 1. To make homogeneous. 2. a. To reduce to particles and disperse throughout a fluid. b. in an equal volume of 0.01 M dithiothreitol solution, prior to centrifugation Centrifugation A mechanical method of separating immiscible liquids or solids from liquids by the application of centrifugal force. This force can be very great, and separations which proceed slowly by gravity can be speeded up enormously in centrifugal at x12,000g for 7 min. Twenty-two enzymes, yielding 30 presumptive pre·sump·tive adj. 1. Providing a reasonable basis for belief or acceptance. 2. Founded on probability or presumption. pre·sump enzyme coding loci with adequate activity and resolution to be genetically interpreted, were studied, including those partially diagnostic loci between M. edulis and M. galloprovincialis (see Gardner 1992, Gosling 1992a, 1992b and references therein). Electrophoresis was performed at 4[degrees]C on 12% to 13% starch starch, white, odorless, tasteless, carbohydrate powder. It plays a vital role in the biochemistry of both plants and animals and has important commercial uses. gels (Starch Art), except for the GPI enzyme, which was analyzed using a horizontal 7.8% polyacrylamide gel pol·y·a·cryl·a·mide gel n. A hydrated polymer consisting of a long chain of amide groups, used as a medium for substances that undergo gel electrophoresis. . The enzyme systems as well as the buffer systems and staining staining /stain·ing/ (stan´ing) 1. artificial coloration of a substance to facilitate examination of tissues, microorganisms, or other cells under the microscope. For various techniques, see under stain. 2. procedures are shown in Table 1. Most enzymes were encoded by one locus, except AAT Alpha-1-antitrypsin (AAT) A blood component that breaks down infection-fighting enzymes such as elastase. Mentioned in: Chronic Obstructive Lung Disease , ACO ACO Aircraft Certification Office (FAA) ACO Ant Colony Optimization ACO Automobile Club de l'Ouest (Le Mans racing governing body) ACO Australian Chamber Orchestra (Sydney, Australia) , IDH IDH Isocitric Dehydrogenase IDH intradialytic hypotension IDH Instituto do Homem (Brasil) IDH Indirect Hire IDH Interface Design Handbook IDH Id Help , MDH MDH Minnesota Department of Health MDH Mälardalens Högskola (Swedish) MDH Malate Dehydrogenase MDH Manila Doctors' Hospital MDH Carbondale, IL, USA - Southern Illinois Airport (Airport Code) , ME, PGM PGM Program PGM Pragmatic General Multicast PGM Phosphoglucomutase PgM Program Manager PGM Platinum Group Metal PGM Pagemaker (software) PGM Portable Gray Map PGM Precision Guided Munition and SOD SOD 1 Sphincter of Oddi dysfunction See Biliary dyskinesia2 Superoxide dismutase, see there , where two loci were detected. The two IDH isoenzymes were interpreted using digestive gland and muscle for each individual, because both IDH electromorphs migrate together and Idh-2 is expressed only in the muscle (Shaw & Prassad 1970). Allozyme nomenclature nomenclature /no·men·cla·ture/ (no´men-kla?cher) a classified system of names, as of anatomical structures, organisms, etc. binomial nomenclature was according to Ahmad et al. (1977) for AP-1, EST-D, LAP-1 and LAP-2, Grant & Cherry (1985) for IDH, Sanjuan et al. (1990) for MPI and ODH, Skibinski et al. (1980) for AAT and PGM and Vainola & Hvilsom (1991) for ACO, ALD ALD abbr. adrenoleukodystrophy ALD, n.pr See adrenoleukodystrophy. ALD aldolase. , ARK, GPI, MDH and ME. Cross-comparison among gels and samples were made to ensure scoring accuracy. Data Analyses Hardy-Weinberg equilibrium expectations for genotype frequencies In population genetics, the genotype frequency is the frequency or proportion (i.e. 0 < f < 1) of genotypes in a population. It may be denoted thus: ![]() Compare allele frequency. at polymorphic polymorphic - polymorphism loci were tested using a goodness-of-fit [chi square chi square (kī), n a nonparametric statistic used with discrete data in the form of frequency count (nominal data) or percentages or proportions that can be reduced to frequencies. ] test, and the probability of the null hypothesis null hypothesis, n theoretical assumption that a given therapy will have results not statistically different from another treatment. null hypothesis, n was estimated using a Monte Carlo simulation Monte Carlo Simulation A problem solving technique used to approximate the probability of certain outcomes by running multiple trial runs, called simulations, using random variables. . The genetic structure of populations was analyzed using F-statistics (Wright 1978, Nei 1987). F-statistics estimates were calculated according to Nei & Chesser (1983) and their statistical significance was tested using a homogeneity Homogeneity The degree to which items are similar. [chi square] test for homogeneity of allele frequencies across samples, and the probability of the null hypothesis was estimated using a Monte Carlo simulation. Tests were adjusted using the sequential Bonferroni method (Hochberg 1988); this method was applied to avoid the type I error resulting from multiple significance testing of the same null hypothesis (Rice 1989). Estimates of genetic variability Introduction Genetic Variability
Nei's (1978) unbiased genetic distances (D) and identities (I) among population pairs were estimated. The resulting pairwise genetic distance matrices were used to build UPGMA UPGMA Unweighted Pair Group Method, Arithmetic Mean dendrograms (unweighted pair-group method with arithmetic averaging) (Sneath & Sokal 1973) and Neighbor-Joining (NJ) trees (Saitou & Nei 1987). To assess the confidence of the obtained trees, 1,000 bootstrap See boot. (operating system, compiler) bootstrap - To load and initialise the operating system on a computer. Normally abbreviated to "boot". From the curious expression "to pull oneself up by one's bootstraps", one of the legendary feats of Baron von Munchhausen. replicates of each data matrix were generated (Felsenstein 1985). The samples were also ordinated with a nonmetric multidimensional scaling Multidimensional scaling (MDS) is a set of related statistical techniques often used in data visualisation for exploring similarities or dissimilarities in data. MDS is a special case of ordination. of the genetic identity matrix, and the final stress was calculated (Dunn & Everitt 1982). A minimum length spanning tree (MST See micro systems technology. ) from the identity matrix was also calculated and superimposed su·per·im·pose tr.v. su·per·im·posed, su·per·im·pos·ing, su·per·im·pos·es 1. To lay or place (something) on or over something else. 2. on the ordination ordination: see ministry; orders, holy. diagram to graphically detect local distortions (Dunn & Everitt 1982, Rohlf 1995). Data were reduced and displayed using other multivariate The use of multiple variables in a forecasting model. analyses. Samples were ordinated with principal component analysis on allele frequencies of the polymorphic loci (Pimentel 1979, Manly 1991). The major components might be expected to represented factors that have affected differentiation of several allele frequencies simultaneously. The analysis was carried out on the covariance matrix In statistics and probability theory, the covariance matrix is a matrix of covariances between elements of a vector. It is the natural generalization to higher dimensions of the concept of the variance of a scalar-valued random variable. of arcsine-transformed allele frequencies. To reduce the effect of sampling error at low frequencies, frequencies smaller than 0.02 were replace by 0.02 before the transformation. The individuals were also ordinated with factorial correspondence analysis (Benztcri 1982) of polymorphic loci. This method finds the orthogonal At right angles. The term is used to describe electronic signals that appear at 90 degree angles to each other. It is also widely used to describe conditions that are contradictory, or opposite, rather than in parallel or in sync with each other. axes axes [L., Gr.] plural of axis. The straight lines which intersect at right angles and on which graphs are drawn. Usually the horizontal axis is the x-axis and the vertical one the y-axis. Called also axes of reference. , which account for the greatest amount of variation in the multidimensional mul·ti·di·men·sion·al adj. Of, relating to, or having several dimensions. mul ti·di·men space. For each individual, each allele was treated
as a separate variable, with the number of copies of the allele (0, 1 or
2) as the values of the variable. Only those individuals with genotypes
for all polymorphic loci were considered. The "Selection AFC (1) (Application Foundation Classes) A class library from Microsoft that provides an application framework and graphics, graphical user interface (GUI) and multimedia routines for Java programmers. "
procedure implemented in GENETIX v4.03 (Belkhir et al. 2002) was used.
The genetic data were analyzed using the BIOSYS-1 (Swofford & Selander 1981), FSTAT v2.9.3 (Goudet 2002), GENEPOP v3.2 (Raymond & Rousset 2000) and PHYLIP PHYLIP Phylogeny Inference Package (genetics software) v3.5c (Felsenstein 1995) computer programs. Most ordinate ordinate: see Cartesian coordinates. (mathematics) ordinate - The y-coordinate on an (x,y) graph; the output of a function plotted against its input. x is the "abscissa". See Cartesian coordinates. multivariate analyses were performed with the NTSYS-pc (Rohlf 1995) package. RESULTS Four of the 30 analyzed enzyme loci ([beta]- Gal, Mdh-2, Sod-1 and Sod-2) were monomorphic monomorphic /mono·mor·phic/ (-mor´fik) existing in only one form; maintaining the same form throughout all developmental stages. mon·o·mor·phic or mon·o·mor·phous adj. 1. for all samples, and the remainder 26 enzyme loci showed consistent polymorphism polymorphism, of minerals, property of crystallizing in two or more distinct forms. Calcium carbonate is dimorphous (two forms), crystallizing as calcite or aragonite. Titanium dioxide is trimorphous; its three forms are brookite, anatase (or octahedrite), and rutile. and their allele frequencies are shown in Table 2. M. edulis (EH) and M. galloprovincialis (GV) control populations showed important differences at the allele frequencies in 9 loci (Aco-1, Ap-1, Est-D, Gpi, Idh-1, Lap-1, Me-2, Mpi and Odh), which, in general, agreed with those previously reported for both mussel forms (Skibinski et al. 1983, Grant & Cherry 1985, Varvio et al. 1988, McDonald et al. 1990, McDonald et al. 1991, Vaintola & Hvilsom 1991, Gosling 1992b, Seed 1992, Sanjuan et al. 1994, Sanjuan et al. 1997 and references therein). Of the six most studied loci, Est-D, Gpi, Lap-1, Mpi and Odh showed important differences, and Ap-1 showed a lower differentiation. For example, [Gpi.sup.102] and [Gpi.sup.107] alleles together and also [Lap-1.sup.96] and [Lap-1.sup.100] together showed the highest frequencies in the control population of M. edulis (0.833 and 0.970, respectively), whereas in the M. galloprovincialis sample they were lower (0.151 and 0.000, respectively). Moreover, control populations also showed important differences for Aco-1 and Me-2 and at less degree for Idh-1. For example, the most frequent allele for M. edulis was [Aco-1.sup.110], with a frequency of 0.750 whereas it was 0.175 for M. galloprovincialis. This genetic differentiation was previously reported by Grant & Cherry (1985) for Me-2 and Idh-1 and for both and Aco-1 by Comesana (1997) and Trucco (2000). To quantify Quantify - A performance analysis tool from Pure Software. the discrimination power of each locus for M. edulis and M. galloprovincialis samples, the diagnostic values (DVs) for all loci were calculated using the method of Ayala & Powell (1972). The diagnostic values represent the probability of making a correct diagnosis based on the genotype genotype (jēn`ətīp'): see genetics. genotype Genetic makeup of an organism. The genotype determines the hereditary potentials and limitations of an individual. at each of the diagnostic loci, and a locus has been defined as diagnostic if an individual can be correctly assigned to one of two taxa with a probability of 99% or higher. Three loci (Est-D, Lap-1 and Mpi) shows DVs higher than 0.95, four (Aco-1, Gpi, Me-2 and Odh) were between 0.85 and 0.95, and two (Ap-1 and Idh-1) were between 0.70 and 0.85. The other polymorphic loci showed DVs lower than 0.70. However, these DVs obtained from two samples are indicative, and they must been taken with caution because of the genetic differentiation among samples of the same taxon taxon (pl. taxa), in biology, a term used to denote any group or rank in the classification of organisms, e.g., class, order, family. . The locus Lap-1 showed DV > 0.99, and consequently it would be a diagnostic loci sensu Ayala & Powell (1972). However, in general, most of the earlier mentioned loci are considered as partially diagnostic loci for M. edulis and M. galloprovincialis forms. Samples from Chile showed a different behavior in allele frequencies with respect to control populations (EH and GV) depending on loci (Table 2). The locus Lap-1 showed frequencies of the diagnostic alleles [Lap-1.sup.96] + [Lap-1.sup.100] in the Chilean populations (0.929-0.976) very close to that of M. edulis (EH, 0.970) (Table 2). For other 4 loci (Aco-1, Ap-1, Est-D and Mpi), Chilean samples showed intermediate allele frequencies for the typical alleles of M. edulis and M. galloprovincialis between those of both control samples. However, allele frequencies at 2 of these 4 loci (Ap-1 and Mpi) were more similar to those of M. edulis than those of M. galloprovincialis, whereas at the 2 other loci (Aco-1 and Est-D) were more similar to those of M. galloprovincialis. For example, for Mpi, the frequencies of the allele [Mpi.sup.200] for Chilean samples ranged from 0.600-0.838 (arithmetic mean (mathematics) arithmetic mean - The mean of a list of N numbers calculated by dividing their sum by N. The arithmetic mean is appropriate for sets of numbers that are added together or that form an arithmetic series. : 0.700), which were closer to the high value of M. edulis (0.975) than to the low one of M. galloprovincialis (0.027). Alternatively, for Aco-1, the allele [Aco-1.sup.105] in Chilean samples ranged from 0.535-0.631 (arithmetic mean: 0.573), which were closer to that of M. galloprovincialis (0.800) than to that of M. edulis (0.112). At other 3 loci (Gpi, Idh-1 and Odh) the most frequent allele in the South American samples was a characteristic allele of M. galloprovincialis, but at a higher frequency. For example, for Odh the allele [Odh.sup.129] in Chilean samples ranged from 0.846-0.984 whereas in M. galloprovincialis was 0.329 and in M. edulis 0.039. At the Me-2 locus, the most frequent allele in Chilean samples was [Me-2.sup.90] that ranged from 0.293-0.514 (arithmetic mean: 0.436) and had a low frequency in M. edulis and M. galloprovincialis samples (< 0.015) (Table 2). The [Me-2.sup.100] allele, characteristic of M. galloprovincialis (0.716), was the second most common allele in Chilean samples (0.36-10.476; arithmetic mean: 0.397). The South American samples also showed important differences with regard to M. edulis and M. galloprovincialis control populations at allele frequencies for 3 other loci (Lap-2, Pgm-2 and Pp). For two loci, the most common alleles for M. edulis and M. galloprovincialis samples [Lap-2.sup.100] and [Pgm-2.sup.100] showed higher frequencies for Chilean samples (arithmetic means: 0.742 and 0.823, respectively) than for control samples (between 0.544 and 0.583 for taxa and loci). Moreover, for Lap-2, the second most frequent allele in Chilean samples was [Lap-2.sup.95] (0.146-0.229; arithmetic mean: 0.195) instead of [Lap-2.sup.105], which was common in control samples (0.236 and 0.346). For Pp, the [Pp.sup.90] allele had higher frequencies in Chilean samples (0.427-0.543; arithmetic mean: 0.477) than in M. edulis and M. galloprovincialis samples (<0.080), whereas the most common allele [Pp.sup.100] was lower (0.436-0.524; arithmetic mean: 0.487) than in control samples (0.710, 0.912) (Table 2). Unbiased expected mean heterozygosity heterozygosity /het·ero·zy·gos·i·ty/ (het?er-o-zi-gos´i-te) the state of possessing different alleles at a given locus in regard to a given character.heterozy´gous het·er·o·zy·gos·i·ty n. ([H.sub.e]), the mean number of alleles and the polymorphism at the 95% and 99% criteria are also shown in Table 2. All populations showed similar genetic variability, being the Ancud sample (PAN) that with the lowest expected heterozygosity (0.220 [+ or -] 0.039) and the highest the M. edulis control sample (0.262 [+ or -] 0.045). However, no significant differences among all pair of values were found with the t-test (Nei 1987) (data not shown). Puerto Montt Puerto Montt (pwār`tō mōnt), city (1992 pop. 130,730), capital of Los Lagos region, S central Chile, a port on Ancud Gulf, an inlet of the Pacific Ocean. (PPM) sample showed the lowest number of alleles per locus (2.5 [+ or -] 0.2) and M. galloprovincialis (GV) the highest (3.5 [+ or -] 0.3). Twenty-seven of the 142 [chi square] tests were significant (Table 3), showing departure of genotype frequencies from Hardy-Weinberg expected proportions (P < 0.05). Of these, only 13 showed significant deviations after Bonferroni correction In statistics, the Bonferroni correction states that if an experimenter is testing n independent hypotheses on a set of data, then the statistical significance level that should be used for each hypothesis separately is 1/n . These 13 significative sig·nif·i·ca·tive adj. 1. Tending to signify or indicate; indicative. 2. Having meaning; significant. sig·nif values showed positive values of F (deficiencies of heterozygotes) and involved only 5 loci: Est-1 in EH, PPM and PQE PQE Post Qualification Experience PQE Print Quality Enhancement PQE Province of Quebec PQE Preliminary Qualifying Exam PQE Project Quality Engineering PQE Procurement Quality Engineering PQE point quotation explanation PQE Pragmatic Quality Evaluation samples, Gpi in GV, PVA PVA polyvinyl alcohol. , PAN and PQE samples, Lap-1 in GV sample, Me-1 in PVA, PPM and PQE samples and Me-2 in GV and EH samples (Table 3). Note that for Chilean samples only 1 partially diagnostic locus (Gpi) showed significant positive F values and a possible Wahlund effect In population genetics, the Wahlund effect refers to reduction of heterozygosity in a population caused by subpopulation structure. Namely, if two or more subpopulations have different allele frequencies then the overall heterozygosity is reduced, even if the subpopulations can be disregarded dis·re·gard tr.v. dis·re·gard·ed, dis·re·gard·ing, dis·re·gards 1. To pay no attention or heed to; ignore. 2. To treat without proper respect or attentiveness. n. . Moreover, heterozygote heterozygote (hĕt'ərōzī`gōt): see genetics. deficiency at allozyme loci in bivalves has been described previously although its causes are still unclear (Gosling 1992b, Raymond et al. 1997). The mean value of [F.sub.ST] over all analyzed samples, including Chilean and European samples, was high and significant ([F.sub.ST] = 0.180) (Table 4, Group A) but the [F.sub.ST] value for Chilean samples was low ([F.sub.ST] = 0.012) (Table 4, Group B). Significant interpopulation genetic differentiation was detected for most loci (20) when European and South American Pacific samples were included in the analysis (Table 4, Group A), but only six loci showed significant genetic differentiation among South American samples after Bonferroni correction (Table 4, Group B). Unbiased genetic distance (Nei 1978) between M. edulis (EH) and M. galloprovincialis (GV) control samples was the highest (D = 0.190) (data not shown). The average genetic distances between the South American samples and M. edulis (D = 0.125) and M. galloprovincialis populations (D = 0.101) were lower than that between control Mytilus samples, and the average genetic distance among South American samples was of D = 0.011 (data not shown). The UPGMA dendrogram A dendrogram is a tree diagram frequently used to illustrate the arrangement of the clusters produced by a clustering algorithm (see cluster analysis). Dendrograms are often used in computational biology to illustrate the clustering of genes. (Fig. 2a) and the Neighbor-Joining tree (Fig. 2b) constructed from the unbiased genetic distances matrix (Nei 1978) showed a first cluster that included the four South American populations. This Chilean cluster was grouped with the M. galloprovincialis (GV) control sample. The bootstrap values were high for the UPGMA tree (82% for Chilean samples and 100% for Chilean and M. galloprovincialis sample) but not so much for the Neighbor-joining. The multidimensional scaling of the genetic identity matrix (Fig. 2c) showed the Chilean populations in an intermediate position between M. edulis and M. galloprovincialis, but closer to M. galloprovincialis. [FIGURE 2 OMITTED] Considering the allele frequencies of samples, a principal component analysis (PCA (tool, programming) PCA - A dynamic analyser from DEC giving information on run-time performance and code use. ) based on the transformed arcsine of allele frequencies was carried out and projections of samples on first two principal components are shown in Figure 3. The first component (explains 40.79% of the variation among allele frequencies of samples) clearly separated Chilean samples from both Mytilus control samples, but closer to M. galloprovincialis (GV) than to M. edulis (EH). The second component (28.09%), showed Chilean samples in an intermediate position between M. edulis and M. galloprovincialis. [FIGURE 3 OMITTED] A more detailed analysis at individual level was carried out. A factorial correspondence analysis (FCA FCA Abbreviation for the Free Carrier ) from a matrix of 153 individuals (110 from South America, 23 M. edulis and 20 M. galloprovincialis) and 107 alleles from 23 polymorphic loci (the 26 polymorphic loci except Ald, Gapdh and Pgm-1, which showed low number of individuals for a control sample) was carried out. The projection of individuals on the first two axes (Fig. 4), showed the separation of the 3 groups of individuals, the M. edulis, the M. galloprovincialis and South American individuals. The Chilean individuals were most similar in their axes scores to M. galloprovincialis. The first axis showed Chilean mussels in an extreme position closer to M. galloprovincialis than to M. edulis, in a similar way that the first principal component of the above PCA (Fig. 3). The second axis showed Chilean individuals in an intermediate position between M. edulis and M. galloprovincialis individuals. [FIGURE 4 OMITTED] DISCUSSION The allele frequencies of the most extensively studied partially diagnostic loci Ap-1, Est-D, Gpi, Lap-1, Mpi and Odh for the European control samples of M. edulis (EH) and M. galloprovincialis (GV) in general were in agreement with those previously reported (Skibinski et al. 1983, Grant & Cherry 1985, Varvio et al. 1988, McDonald et al. 1990, McDonald et al. 1991, Vainola & Hvilsom 1991, Sanjuan et al. 1994, Sanjuan et al. 1997, Comesana 1997, Comesana et al. 1998, Trucco 2000). Other 3 less studied loci (Aco-1, ldh-1 and Me-2) were found to be partially diagnostic between these two Mytilus forms in accordance Accordance is Bible Study Software for Macintosh developed by OakTree Software, Inc.[] As well as a standalone program, it is the base software packaged by Zondervan in their Bible Study suites for Macintosh. with Grant & Cherry (1985) for Idh-1 and Me-2 and Comesana (1997) and Trucco (2000) for the three loci. Moreover, the Nei's (1978) genetic distance between both European control samples using 30 loci was D = 0.190, which was at the level of that found by Skibinski et al. (1980) (D = 0.172 using 16 enzyme loci) and Grant & Cherry (1985) (D = 0.162 using 23 loci) for the same Mytilus taxa. The Chilean samples showed for four of the nine partially diagnostic loci, intermediate allele frequencies between those of typical alleles of European M. edulis and M. galloprovincialis samples; for 2 loci (Ap-1 and Mpi) the allele frequencies were more similar to those of M. edulis and for Aco-1 and Est-D to those of M. galloprovincialis. The locus Lap-1 showed similar allele frequencies to those of M. edulis, whereas the most common allele for Gpi, Idh-1 and Odh in Chilean samples was one of the typical allele of M. galloprovincialis but at a higher frequency. The UPGMA dendrogram and the Neighbor-joining tree (Fig. 2a, b) as well as the multidimensional scaling (Fig. 2c) grouped the four Chilean mussel populations, closer to M. galloprovincialis than to M. edulis. Moreover, ordination analyses of the samples based on the transformed allele frequencies (the principal component analysis, Fig. 3), as well as the factorial correspondence analysis on genotypes of individuals (Fig. 4), showed the Chilean samples and individuals clearly separated from both M. edulis and M. galloprovincialis control samples by the first component and in an intermediate position between M. edulis and M. galloprovincialis by the second component, but closer to M. galloprovincialis than to M. edulis (Fig. 3, 4). Moreover, the genetic distance between Chilean samples and the European M. galloprovincialis was lower (D = 0.101) than that with M. edulis (D = 0.125). Before the present work, only McDonald et al. (1991) had analyzed by allozyme electrophoresis Mytilus individuals from the Pacific coast of South America. They analyzed the 8 allozyme loci Ap-1, Est-D, Gpi, Lap-1(Aat), Lap-2 (Lap), Mpi, Odh and Pgm-2, all of them included in this study and included 2 samples (40 and 41) from the same area of the present samples (the sample 42 was from the southern Chile Southern Chile is one of the five natural regions of Chile defined by the CONAMA. Southern Chile stretches from below the Río Bío-Bío at about 38° south latitude to below Isla de Chiloé at about 43.4° south latitude. ), with a mean sample size of 25 individuals per sample. To establish reasonably allele homologies between McDonald et al. (1991) paper and the present study several criteria as those reported by Sanjuan et al. (1997) were used. The present allele frequencies at 6 of these loci (Ap-1, Lap-1, Lap-2, Mpi, Odh and Pgm-2) were close to those reported by McDonald et al. (1991) and for Est-D they were similar to those of one of the samples (sample 41). The case of Gpi is peculiar. The most common allele for the four Chilean samples ([Gpi.sup.100]) showed frequencies (67.4% to 87.1%) closer to those of M. galloprovincialis control sample (frequency of 54.5%) than to those of M. edulis (2.0%), whereas for the two Chilean samples of McDonald et al. (1991) the most common allele ([Gpi.sup.98]) (frequency of 85% to 92%) was that typical of M. trossulus (frequency of 56%). Note that published data of samples of M. edulis and M. galloprovincialis from Europe have similar frequencies that present results, as those of Vainola & Hvilsom (1991) and Varvio et al. (1988) and that of McDonald et al. (1990, 1991) for M. galloprovincialis, but not for M. edulis. The most frequent allele for M. edulis from Denmark and White Sea is [Gpi.sup.107] (frequencies 44% and 58%) (McDonald et al. 1990, see also Gosling, 1992b, pp. 319), as in the present work and also in Vainola & Hvilsom (1991) and Varvio et al. (1988), but at 2nd and 3rd positions were [Gpi.sup.100] (14% and 18%) and [Gpi.sup.96] (16% and 10%), instead of [Gpi.sup.102] (and perhaps [Gpi.sup.98]) as in the present work and in Vainola & Hvilsom (1991) and Varvio et al. (1988). These results on M. edulis and Chilean mussels are contradictories with present data, and the explanation is not easy. However, the principal component analysis (PCA) of McDonald et al. (1991) suggests that Chilean mussels were more similar to M. edulis from the northern hemisphere than to M. galloprovincialis. A reanalysis of present data using only the eight loci analyzed by McDonald et al. (1991) showed an UPGMA dendrogram with the cluster of the Chilean samples (bootstrap value of 91%) grouped with the M. edulis sample (bootstrap value of 100%). Consequently, it could be that the similarity of Pacific South American mussels to M. edulis, reported by McDonald et al. (1991), could be an effect of the low number of loci used. Present results using 30 allozyme loci seem to be more representative of the genetic relationship among Mytilus taxa than other works using a lower number of genes. With regard to other molecular markers Molecular marker is a term with a number of uses. It is any kind of molecule indicating the existence of a chemical or physical process. In particular, in the fields of geology and astrobiology, biomarkers (also known as biosignatures) are sometimes understood as molecules , Toro (1998) used 2 nuclear DNA markers (ITS and Glu5'; Heath et al. 1995, Rawson et al. 1996) and one mitochondrial DNA Mitochondrial DNA (mtDNA) is the DNA located in organelles called mitochondria. Most other DNA present in eukaryotic organisms is found in the cell nucleus. Nuclear and mitochondrial DNA are thought to be of separate evolutionary origin, with the mtDNA being derived from the marker (COIII), to analyze a sample of 30 mussels from Bahia Corral corral a small fenced-in enclosure with high, wooden fences, suitable for holding cattle or horses. corral system a management system in which range cattle are put into corrals and fed hay for a period when the environment is most , located within the geographic range of the present study. Data from ITS and COIII showed the same pattern for Chilean individuals, M. edulis from Newfoundland and M. galloprovincialis from New Zealand, but, the Glu5' marker showed the same banding pattern for Chilean Mytilus and M. galloprovincialis from New Zealand and different from M. edulis control sample from Newfoundland. Moreover, Daguin & Borsa (2000) analyzed the two diagnostic nuclear DNA markers, Glu 5' and the polymorphic mac-1. In a sample of cultivated cultivated, n in herbal medicine, used to describe plants that are commercially farmed rather than collected from the wild. mussels from Dichato, about 400 km to the north of the present sample of Valdivia (PVA) (see Fig. 1), they found for Glu 5' the typical M. galloprovincialis allele fixed (Rawson et al. 1996) and for mac-1 locus (Ohresser et al. 1997) a high frequency of the [b.sub.1] and [c.sub.2] characteristic alleles of M. galloprovincialis. Moreover, Hilbish et al. (2000) studied RFLPs and sequences of the mitochondrial 16S rRNA gene, and they found that all RFLP RFLP abbr. restriction fragment length polymorphism RFLP restriction fragment length polymorphism. RFLP haplotypes obtained in two northern Chilean samples were 100% type D, the typical haplotype haplotype /hap·lo·type/ (-tip) the group of alleles of linked genes, e.g., the HLA complex, contributed by either parent; the haploid genetic constitution contributed by either parent. hap·lo·type n. of M. galloprovincialis, and the phylogenetic phy·lo·ge·net·ic adj. 1. Of or relating to phylogeny or phylogenetics. 2. Relating to or based on evolutionary development or history. analysis of the 16S rRNA gene grouped Chilean sequences within the cluster of the northern hemisphere M. galloprovincialis. In the same line, Martinez-Lage et al. (2005) using satellite DNA sequences maintain that Chilean specimens are closer to M. galloprovincialis than to M. edulis. In resume, taking into account the data based on 30 enzyme loci, an important representation of the genome and the earlier mentioned genetic results with nuclear DNA markers, RFLPs and sequences of the mitochondrial 16S DNA, it seems that mussels from the northern limit of distribution on Pacific coast of South America were genetically closer to M. galloprovincialis than to M. edulis. However, Rego et al. (2002) have reported banding patterns of RAPDs for a Chilean sample closer to those of the European M. edulis than those of M. galloprovincialis. Moreover, DNA sequences DNA sequence Genetics The precise order of bases–A,T,G,C–in a segment of DNA, gene, chromosome, or an entire genome. See Base pair, Base sequence analysis, Chromosome, Gene, Genome. of the H1 histone coding region have shown that Chilean mussels were closer to M. californianus than to the northern M. edulis, M. galloprovincialis and M. trossulus (Eirin-Lopez et al. 2002). These results could be a consequence of the peculiarity of the Chilean mussels (and South American samples), as previously considered by McDonald et al. (1991). The mussel samples from the northern Chile seem to constitute a group relatively homogeneous The same. Contrast with heterogeneous. homogeneous - (Or "homogenous") Of uniform nature, similar in kind. 1. In the context of distributed systems, middleware makes heterogeneous systems appear as a homogeneous entity. For example see: interoperable network. and different from the European M. edulis and M. galloprovincialis samples, as shown in the dendrograms (Fig. 2a, b) and the ordination analyses (Fig. 2c, 3, 4). They showed characteristic and consistent patterns at allele frequencies for several loci, manly Aco-1, Ap-1, Est-D, Gpi, Idh-1, Lap-2, Me-2, Mpi, Odh, Pgm-2 and Pp, different from those of M. edulis and M. galloprovincialis samples (Table 2). Of these loci, only Gpi and Odh showed significant degree of genetic interpopulation differentiation with [F.sub.ST] values of 0.0214 and 0.0449, respectively (Table 4, Group B). Moreover, the [F.sub.ST] mean for the South American samples was low ([F.sub.ST] = 0.012), which suggests a high level of gene flow among populations (Nei 1987). This is in accordance with the general statement that within each mussel form and for a particular distinct geographic region the allele frequencies are generally homogenous homogenous - homogeneous (Gosling 1992b and references therein). Moreover, the diagnostic values (DVs) between Chilean mussels (using the mean of the allele frequencies across the four samples) and the control samples were calculated. The DVs were higher than 0.80 at Aco-1 (0.81), Est-D (0.89), Gpi (0.97), Idh-1 (0.82), Me-2 (0.91), Odh (0.98) and Pp (0.82) for M. edulis and at Lap-1 (0.999), Me-2 (0.85), Mpi (0.94) and Odh (0.89) for M. galloprovincialis. None of these loci discriminated unequivocally among the three groups, although each locus made some contribution. Consequently, if three Mytilus taxa were considered, individuals with a given genotype for the earlier mentioned loci (or combinations of only several loci) can be assigned to a taxon with one probability of erroneous erroneous adj. 1) in error, wrong. 2) not according to established law, particularly in a legal decision or court ruling. assignment using the method of Ayala & Powell (1972). This means that the three different gene pools could be genetically identified. In resume, the Chilean mussels seem to be a Mytilus taxon different to both M. edulis and M. galloprovincialis from the Atlantic European waters. The identification of the Chilean mussels as a different taxon of the other Mytilus forms does not resolve the problem of the appropriate taxonomic category Noun 1. taxonomic category - animal or plant group having natural relations taxon, taxonomic group Adapid, Adapid group - extinct small mostly diurnal lower primates that fed on leaves and fruit; abundant in North America and Europe 30 to 50 million years of this mussel group. The main problem is the controversy on the taxonomic status of the main smooth Mytilus lineages, M. edulis, M. galloprovincialis and M. trossulus (see Varvio et al. 1988, McDonald et al. 1991, Gardner 1992, Gosling 1992a, 1992b, Seed 1992). For example, Toro (1998) found the same Glu 5' pattern for a Chilean sample and a M. galloprovincialis sample from New Zealand and different from those of the control samples of M. edulis and M. trossulus. Based upon these results and those reported by McDonald et al. (1991) for Est-[D.sup.90] allele frequency ("the most common esterase esterase /es·ter·ase/ (es´ter-as) any enzyme which catalyzes the hydrolysis of an ester into its alcohol and acid. es·ter·ase n. Any of various enzymes that catalyze the hydrolysis of an ester. allele in M. galloprovincialis and the rarest in M. edulis was the most common allele in the two mussel samples from Chile" (?), Toro 1998, pp. 352), he considered that the similarity between M. chilensis and M. galloprovincialis gives them the same taxonomic status. According to the hypothesis that M. galloprovincialis is a subspecies of M. edulis (Gardner 1992); Toro (1998) proposed that the taxonomic status of the Chilean mussel is M. edulis chilensis. Other authors recognize the smooth Mytilus lineages, M. edulis, M. galloprovincialis and M. trossulus as distinct species based on different reasons (Koehn 1991, McDonald et al. 1991; see for a review Gosling 1992a, 1992b and references therein). The results of the present work, using a large number of allozyme loci (30 loci) and four samples from the northern distribution of Mytilus on the South American Pacific coasts, showed that (1) mussels from this area form a relatively homogenous group with characteristic allele frequencies for several loci and different from those of the European M. edulis and M. galloprovincialis control populations. Moreover, (2) Chilean mussels were genetically closer to European M. galloprovincialis than M. edulis using 30 enzyme loci, as well as for most of the reported DNA markers. Moreover, (3) the genetic distances among Chilean mussels and European M. edulis and M. galloprovincialis were lower than that between these European taxa. Taken these results into account, we propose that the taxonomic status for mussels from the Pacific of South America, at least in the north limit, could be Mytilus galloprovincialis chilensis. ACKNOWLEDGMENTS The authors thank Dr. Annie Machordom for their careful reading of manuscript, useful comments and suggestions. This research was supported by grants PB98-1093 (Direccion General de Ensenanza Superior e Investigacion Cientifica, MEC MEC Ministério da Educação (Ministry of Education) MEC Ministerio de Educación y Ciencia (Spain: Ministry for Education and Science) MEC Mountain Equipment Co-Op , Spain) and PGIDT00PXI (PCI EXtensions for Instrumentation) A peripheral bus specialized for data acquisition and real time control systems. Introduced in 1997, PXI uses the CompactPCI 3U and 6U form factors and adds trigger lines, a local bus and other functions suited for measurement 30117PN (Xunta de Galicia The Xunta de Galicia is the political bureaucracy for the autonomous community of Galicia in Spain. According to the Galician Statute of Autonomy, it consists of the president, the vice-president (if necessary), and the specialized ministers (Conselleiros). , Spain) to AS. CC was supported by a research fellowship from AECI (Agencia Espanola de Cooperacion Internacional, Spain) and University of Vigo The University of Vigo (Galician: Universidade de Vigo) is a public university located in the city of Vigo, Galicia. There are three campuses:
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Stony Brook is a hamlet (unincorporated community) (and census-designated place) located in the Town of Brookhaven in Suffolk County, New York. The population was 13,727 at the 2000 census. . McDonald, J. H., R. K. Koehn, E. S. Balakirev, G. P. Manchenko, A. I. Pudovkin, S. O. Sergievskii & K. V. Krutovskii. 1990. Species identity of the "common mussel" inhabiting the Asiatic coasts of the Pacific Ocean. Sov. J. Mar. Biol. 16(1):10-18. English translation from Biol. Morya. Vladivostok 1990(1):13-22. (in Russian) McDonald, J. H., R. Seed & R. K. Koehn. 1991. Allozymes and morphometric characters of three species of Mytilus in the Northern and Southern hemispheres. Mar. Biol. 111:323-333. Murphy, R. W., C. W. Sites, Jr., D. G. Buth & C. H. Haufler. 1996. Proteins I: isozyme isozyme /iso·zyme/ (i´so-zim) one of the multiple forms in which an enzyme may exist in an organism or in different species, the various forms differing chemically, physically, or immunologically, but catalyzing the same reaction. electrophoresis. In: D.M. Hillis & C. Moritz, editors. Molecular systematics. Massachusetts: Sinauer Associates. pp. 45-126. Nei, M. 1978. Estimation estimation In mathematics, use of a function or formula to derive a solution or make a prediction. Unlike approximation, it has precise connotations. In statistics, for example, it connotes the careful selection and testing of a function called an estimator. of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:83-590. Nei, M. 1987. Molecular evolutionary genetics Evolutionary genetics is the broad field of studies that attempts to account for evolution in terms of changes in gene and genotype frequencies within populations and the processes that convert the variation with populations into more or less permanent variation between species. . Columbia Univ. Press, New York, USA. Nei, M. & R. K. Chesser. 1983. Estimation of fixation indices and gene diversities. Ann. Hum hum (hum) a low, steady, prolonged sound. venous hum a continuous blowing, singing, or humming murmur heard on auscultation over the right jugular vein in the sitting or erect position; it is . Genet. 47:253-259. Ohresser, M., P. Borsa & C. Delsert. 1997. Intron Intron In split genes, a portion that is included in ribonucleic acid (RNA) transcripts but is removed from within a transcript during RNA processing and is rapidly degraded. length polymorphism at the actin gene locus mac-1: a genetic marker genetic marker n. A gene phenotypically associated with a particular, easily identified trait and used to identify an individual or cell carrying that gene. for population studies in the marine mussels Mytilus galloprovincialis Lmk. and M. edulis L. Mol. Mar. Biol. Biotechnol. 6:123-130. Osorio, C. & N. Bahamonde. 1968. Moluscos bivalvos en las pesquerias chilenas. Biol. Pesq. 3:69-128. Pimentel, R. A. 1979. Morphometrics Generally, morphometrics (from the Greek: "morph," meaning shape or form, and "metron”, meaning measurement) comprises methods of extracting measurements from shapes. In most cases applied to biological topics in the widest sense. . The multivariate analysis multivariate analysis, n a statistical approach used to evaluate multiple variables. multivariate analysis, n a set of techniques used when variation in several variables has to be studied simultaneously. of biological data. Dubuque IA: Kendal/Hunt Publication Co. 276 pp Rawson, P. D., K. L. Joyner, K. Meetze & T. J. Hilbish. 1996. Evidence for intragenic recombination recombination, process of "shuffling" of genes by which new combinations can be generated. In recombination through sexual reproduction, the offspring's complete set of genes differs from that of either parent, being rather a combination of genes from both parents. within a novel genetic marker that distinguishes mussels in the Mytilus edulis species complex. Heredity heredity, transmission from generation to generation through the process of reproduction in plants and animals of factors which cause the offspring to resemble their parents. That like begets like has been a maxim since ancient times. 77: 599-607. Raymond, M. R. L., R. L. Vaanto, F. Thomas, F. Rousset, T. Meeus & F. Renaud. 1997. Heterozygote deficiency in the mussel Mytilus edulis species complex revisited. Mar. Ecol. Prog. Ser. 156:225-237. Raymond, M. R. L. & F. Rousset. 2000. GENEPOP v3.2 population genetics Population genetics The study of both experimental and theoretical consequences of mendelian heredity on the population level, in contradistinction to classical genetics which deals with the offspring of specified parents on the familial level. software for exact tests and ecumenicism ec·u·men·i·cism n. Ecumenism. ec u·men i·cist n. . Universite de
Montpellier II, France.
Rego, I., A. Martinez, A. Gonzalez-Tizon, J. Vieites, F. Leira & J. Mendez. 2002. PCR PCR polymerase chain reaction. PCR abbr. polymerase chain reaction Polymerase chain reaction (PCR) technique for identification of mussel species. J. Agric. Food Chem. 50:1780-1784. Rice, W. R. 1989. Analyzing tables of statistical tests. Evol. 43:223-225. Rohlf, F. J. 1995. NTSYS-pc numerical taxonomy Numerical taxonomy The grouping by numerical methods of taxonomic units based on their character states. The application of numerical methods to taxonomy, dating back to the rise of biometrics in the late nineteenth century, has received a great deal of and multivariate analysis system, version 1.70, Exeter Software, New York. Saitou, N. & A. Nei. 1987. The Neighbor-Joining method: a new method for reconstructing phylogenetic trees phylogenetic tree Diagram showing the evolutionary interrelations of a group of organisms that usually originated from a shared ancestral form. The ancestor is in the tree trunk; organisms that have arisen from it are placed at the ends of tree branches. . Mol. Biol. Evol. 4:406-425. Sanjuan, A., H. Quesada, C. Zapata & G. Alvarez. 1990. On the occurrence of Mytilus galloprovincialis on the NW coast of the Iberian Peninsula. J. Exp. Mar. Biol. Ecol. 143:1-14. Sanjuan, A., C. Zapata & G. Alvarez. 1994. Mytilus galloprovincialis and M. edulis on the coasts of the Iberian Peninsula. Mar. Ecol. Prog. Ser. 13:131-146. Sanjuan, A., C. Zapata & G. Alvarez. 1997. Genetic differentiation in Mytilus galloprovincialis Lmk. throughout the world. Ophelia 47(1): 13-31. Seed, R. 1992. Systematics evolution and distribution of mussels belonging to the genus Mytilus: an overview. Amer. Malacol. Bull, 9:123-137. Shaw, C. R. & R. Prassad. 1970. Starch gel electrophoresis of enzymes--a compilation of recipes. Biochem. Genet. 4:297-320. Skibinski, D. O. F., T. D. Cross & M. Ahmad. 1980. Electrophoretic e·lec·tro·pho·re·sis n. 1. The migration of charged colloidal particles or molecules through a solution under the influence of an applied electric field usually provided by immersed electrodes. Also called cataphoresis. 2. investigation of systematic relationships in the marine mussels Modiolus modiolus /mo·di·o·lus/ (mo-di´o-lus) the central pillar or columella of the cochlea. mo·di·o·lus n. pl. mo·di·o·li The central conical bony core of the cochlea of the ear. modiolus L., Mytilus edulis L. and Mytilus galloprovincialis Lmk (Mytilidae; Mollusca). Biol. J. Linn linn n. Scots 1. A waterfall. 2. A steep ravine. [Scottish Gaelic linne, pool, waterfall.] . Soc. 13:65-73. Skibinski, D. O. F., J. A. Beardmore & T. F. Cross. 1983. Aspects of the population genetics of Mytilus (Mytilidae: Mollusca) in the British Isles British Isles: see Great Britain; Ireland. . Biol. J. Linn. Soc. 19:137-183. Sneath, P. H. A. & R. R. Sokal. 1973. Numerical taxonomy. San Francisco, California “San Francisco” redirects here. For other uses, see San Francisco (disambiguation). The City and County of San Francisco (EN IPA: [sænfrənˈsɪskoʊ] : Freeman. Soot-Ryen, T. 1955. A report on the family Mytilidae Noun 1. family Mytilidae - marine mussels Mytilidae mollusk family - a family of mollusks Bivalvia, class Bivalvia, class Lamellibranchia, class Pelecypoda, Lamellibranchia - oysters; clams; scallops; mussels (Pelecypoda), Allan Hancock pacif. exped. Los Angeles Los Angeles (lôs ăn`jələs, lŏs, ăn`jəlēz'), city (1990 pop. 3,485,398), seat of Los Angeles co., S Calif.; inc. 1850. , California: California Press, Los Angeles. pp. 1-175. Swofford, D. L. & R. B. Selander. 1981. BIOSYS-1 version 1.7. A computer program for the analysis of allelic al·lele n. One member of a pair or series of genes that occupy a specific position on a specific chromosome. [German Allel, short for Allelomorph, allelomorph, from English variation in genetics. Department of genetics and development, University of Illinois University of Illinois may refer to:
Toro, J. 1998. PCR-based nuclear and mtDNA markers and shell morphology morphology In biology, the study of the size, shape, and structure of organisms in relation to some principle or generalization. Whereas anatomy describes the structure of organisms, morphology explains the shapes and arrangement of parts of organisms in terms of such as an approach to study the taxonomic status of the Chilean blue mussel, Mytilus chilensis (Bivalvia). Aquat. Living Resour. 11(5):347353. Toro, J. E., J. A. Ojeda & A. M. Vergara. 2004. The genetic structure of Mytilus chilensis (Hupe 1854) populations along the Chilean coast based on RAPDs analysis. Aqua. Res. 35:1466-1471. Trucco, M. I. 2000. Diferenciacion genetica con polimorfismos alozimicos de Mytilus spp. del Atlantico Sudoccidental, PhD thesis. University of Vigo, Spain. Vainola, R. & M. M. Hvilsom. 1991. Genetic divergence Genetic divergence is the process of one species diverging over time into more than one species. Passing small random advantages characteristic changes over time from one generation to the next generations. and a hybrid zone A hybrid zone exists where the ranges of two interbreeding species meet. For a hybrid zone to be stable, the offspring produced by the cross (the hybrids) have to be less fit than members of the parent species, although this condition does not need to be met in the very first between Baltic and North Sea Mytilus populations (Mytilidae: Mollusca). Biol. J. Linn. Soc. 43:127-148. Varvio-Aho, S. L. & P. Pamilo. 1980. A new buffer system with wide applicability. Isozyrne Bull, 13:14. Varvio, S. L., R. K. Koehn & R. Vaino1a. 1988. Evolutionary genetics of the Mytilus edulis complex in the North Atlantic region. Mar. Biol. 98:51-60. Ward, R. D. & J. A. Beardmore. 1977. Protein variation in the plaice plaice: see flatfish. plaice Commercially valuable European flatfish (Pleuronectes platessa). At most 36 in. (90 cm) long, the plaice normally has both eyes on the right side of the head and four to seven bony bumps near its eyes. Pleuronectes platessa. Genet. Res. 30:45-62. Wright, S. 1978. Evolution and the genetics of populations. Variability within and among natural populations, vol. 4. Chicago: University of Chicago Press The University of Chicago Press is the largest university press in the United States. It is operated by the University of Chicago and publishes a wide variety of academic titles, including The Chicago Manual of Style, dozens of academic journals, including . CLAUDIA CARCAMO, (1) * ANGEL S. COMESANA, (1) FEDERICO M. WINKLER Winkler may refer to:
(1) Xenetica Evolutiva Molecular, Facultade de Bioloxia, Universidade de Vigo, E-36200 Vigo, Spain; (2) Departamento de Biolog{a Marina, Facultad de Ciencias del Mar Del Mar is the name of several places in the United States of America:
* Corresponding author. E-mail: tcoba@ccma.csic.es
TABLE 1.
Enzyme systems analyzed showing the Enzyme number (E.N.), the name
abbreviation (Abbr.), and the number of active loci (loci). Staining
procedures were according to AB (Aebersold et al. 1987), AH (Ahmad et
al. 1977), BS (Bulnheim & Scholl 1981), HH (Harris & Hopkinson 1976),
MR (Murphy et al. 1996), GC (Grant & Cherry 1985), SN (Sanjuan et al.
1990), SP (Shaw & Prasad 1970). Buffer systems used were: ACE 5.6
(Sodium acetate pH 5.6, Ahmad et al. 1977) TBE (Tris-borate-EDTA pH
8.7, McDonald 1985), TC 7 (Tris Citrate pH 7.0, Ahmad et al. 1977),
TC 8 (Tris Citrate pH 8.0, Ward & Beardmore 1977), TC 8.4 (Tris
Citrate pH 8.4/7.0, Varvio-Aho & Pamilo 1980) and TCE (Tris Citrate
EDTA pH 7.0, Ayala et al. 1974).
Abbr. Enzyme System
AAT Aspartate aminotransferase
ACO Aconitate hydratase
ALD Fructose-bisphosphate aldolase
AP-1 Glycil-leucine peptidase
ARK Arginine kinase
DIA Dihydrolipoamide dehydrogenase
EST Esterase
[beta]-GAL [beta]-galactosidase
GAPDH Glyceraldehide-3-phosphate dehydrogenase
GPI Glucose-6-phosphate isomerase
G3PDH Glycerol-3-phosphate dehydrogenase NAD (+)
IDH Isocitrate dehydrogenase NADP (+)
LAP-1 Leucine aminopeptidase-1
LAP-2 Leucine aminopeptidase-2
MDH Malate dehydrogenase
ME Malate dehydrogenase NADP (+)
MPI Mannose-6-phosphate isomerase
ODH D-octopine dehydrogenase
PGD 6-phosphogluconate dehydrogenase
PGM Phosphoglucomutase
PP Phenyl-proline peptidase
SOD Superoxide dismutase
Abbr. E.N. Loci Staining Buffer
AAT 2.6.1.1 2 SP TC 7
ACO 4.2.1.3 2 HH TCE
ALD 4.1.2.13 1 AB TC 8.4
AP-1 3.4.13.18 l AH TC 7
ARK 2.7.3.3 l HH TC 8.4
DIA 1.8.1.4 1 MR TC 8.4
EST 3.1.1.1 2 AH, MR ACE 5.6
[beta]-GAL 3.2.1.23 1 MR TBE 8.7
GAPDH 1.2.1.12 1 MR TC 8.4
GPI 5.3.1.9 1 MR TC 8.4
G3PDH 1.1.1.8 1 MR TBE 8.7
IDH 1.1.1.42 2 SP TC 8
LAP-1 3.4.11.- I AH ACE 5.6
LAP-2 3.4.1l.- 1 AH TC 7
MDH 1.1.1.37 2 AB TC 8.4
ME 1.1.1.40 2 AB TC 8.4
MPI 5.3.1.8 1 SN TC 8.4
ODH 1.5.1.11 1 GC TC 8.4
PGD 1.1.1.44 1 HH TC 7
PGM 5.4.2.2 2 HH TCE
PP 3.4.13.9 1 HH TBE
SOD 1.15.1.1 2 MR TBE
TABLE 2.
Allele frequencies for 26 polymorphic enzyme loci for M. edulis (EH)
from the Netherlands, M. galloprovincialis (GV) from the NW of the
Iberian Peninsula and Mytilus sp. from South American Pacific coast.
Populations codes as in Figure 1. N is the sample size. [H.sub.e] is
the unbiased expected mean heterozygosity (Nei, 1987) [+ or -] its
standard error. [P.sub.95] and [P.sub.99] are the percentage of the
polymorphic loci with the 0.95 and 0.99 criteria with standard error,
respectively. Four loci ([beta]-Gal, Mdh-2, Sod-1 and Sod-2) were
monomorphic for all samples.
Populations
Locus EH GV
Aat-1
N 73 74
94 0 0
100 0.979 0.973
108 0.021 0.020
116 0 0.007
Aat-2
N 75 74
94 0.007 0
100 0.993 1
108 0 0
Aco-1
N 58 20
100 0 0
105 0.112 0.800
110 0.750 0.175
115 0.129 0.025
120 0.009 0
Aco-2
N 51 62
95 0.020 0.008
100 0.157 0.121
105 0.784 0.806
107 0.039 0.056
110 0 0
112 0 0.008
Ald
N 25 14
l00 0.920 0.964
112 0.080 0.036
Ap-1
N 71 70
93 0.015 0
96 0.007 0.007
100 0.718 0.379
104 0.007 0
108 0.218 0.457
114 0.035 0.128
122 0 0.029
128 0 0
Ark
N 74 71
92 0.014 0
100 0.986 1
Dia
N 72 70
95 0.104 0.064
100 0.778 0.771
102 0.021 0
105 0.097 0.164
110 0 0
Est-D
N 75 72
82 0 0.035
90 0.013 0.910
100 0.953 0.056
107 0.020 0
110 0.013 0
Est-1
N 60 74
10 0 0.007
100 0.525 0.473
200 0.350 0.378
300 0.108 0.135
400 0.017 0.007
Gapdh
N 56 31
100 0.955 0.823
120 0.036 0.129
140 0.009 0.048
Gpi
N 75 66
93 0.007 0.008
96 0.013 0.015
98 0.053 0.038
100 0.020 0.545
102 0.313 0.068
105 0.047 0.235
107 0.520 0.083
110 0.020 0
112 0.007 0.008
Gapdh
N 65 65
90 0.031 0
100 0.969 1
115 0 0
Idh-1
N 54 47
60 0 0.011
80 0.315 0.638
100 0.611 0.266
150 0.065 0.085
160 0.009 0
Idh-2
N 74 46
96 0.182 0.098
100 0.811 0.891
104 0.007 0
108 0 0.011
Lap-1
N 65 38
93 0 0
96 0.208 0
100 0.762 0
102 0.008 0
104 0.015 0.487
108 0.008 0.461
110 0 0.026
112 0 0.026
Lap-2
N 72 68
90 0.028 0.007
95 0.139 0.088
100 0.583 0.544
102 0.007 0
105 0.236 0.346
110 0.007 0.015
Mdh-1
N 75 69
70 0.013 0.007
100 0.987 0.986
130 0 0.007
Me-1
N 64 33
70 0.039 0
90 0.008 0
100 0.914 0.939
100 0.039 0.061
120 0 0
Me-2
N 65 58
70 0 0
90 0.015 0
100 0.100 0.716
110 0.831 0.276
115 0.023 0
120 0.023 0.009
Mpi
N 59 56
25 0 0
100 0.017 0.973
200 0.975 0.027
300 0.008 0
Odh
N 64 35
80 0 0
100 0.055 0.486
112 0.008 0
115 0.891 0.186
120 0.008 0
129 0.039 0.329
140 0 0
Pgd
N 72 56
95 0.021 0.009
100 0.938 0.964
105 0.035 0.018
110 0.007 0
115 0 0.009
Pgm-1
N 14 19
90 0 0.026
95 0 0.132
100 0.964 0.789
105 0 0.053
115 0.036 0
Pgm-2
N 74 73
90 0.007 0
92 0.041 0.007
96 0.142 0.144
100 0.574 0.548
102 0 0.007
104 0.189 0.240
107 0.041 0.048
110 0.007 0.007
Pp
N 69 68
80 0 0
90 0.072 0.029
100 0.710 0.912
110 0.210 0.044
120 0.007 0
125 0 0.015
[H.sub.e] 0.262 [+ or -] 0.045 0.236 [+ or -] 0.040
Alleles/locus 3.2 [+ or -]0.3 3.5 [+ or -] 0.3
[P.sib.95] 60.0 56.7
[P.sub.99] 76.7 86.7
Populations
Locus PVA PAN
Aat-1
N 61 41
94 0.082 0
100 0.893 0.988
108 0.025 0.012
116 0 0
Aat-2
N 56 41
94 0.009 0
100 0.973 1
108 0.018 0
Aco-1
N 61 41
100 0 0.012
105 0.631 0.573
110 0.369 0.415
115 0 0
120 0 0
Aco-2
N 50 33
95 0.020 0.030
100 0.040 0.045
105 0.920 0.894
107 0.010 0.020
110 0.010 0
112 0 0
Ald
N 40 40
l00 0.988 1
112 0.012 0
Ap-1
N 59 41
93 0 0
96 0.007 0.008
100 0.542 0.622
104 0.008 0
108 0.331 0.293
114 0.093 0.061
122 0.017 0
128 0 0.012
Ark
N 51 39
92 0.216 0.141
100 0.784 0.859
Dia
N 60 40
95 0.042 0.112
100 0.875 0.837
102 0 0
105 0.083 0.050
110 0 0
Est-D
N 61 41
82 0 0
90 0.566 0.622
100 0.426 0.378
107 0 0
110 0.008 0
Est-1
N 59 41
10 0.102 0.098
100 0.593 0.561
200 0.263 0.280
300 0.042 0.061
400 0 0
Gapdh
N 55 36
100 0.864 1
120 0.136 0
140 0 0
Gpi
N 58 41
93 0.009 0
96 0 0
98 0.121 0.110
100 0.759 0.768
102 0.086 0.110
105 0.026 0.012
107 0 0
110 0 0
112 0 0
Gapdh
N 56 40
90 0 0
100 1 1
115 0 0
Idh-1
N 58 39
60 0 0
80 0.862 0.833
100 0.129 0.128
150 0.009 0.038
160 0 0
Idh-2
N 58 41
96 0.017 0
100 0.966 0.976
104 0.017 0.024
108 0 0
Lap-1
N 60 41
93 0.017 0.024
96 0.250 0.317
100 0.683 0.659
102 0 0
104 0.050 0
108 0 0
110 0 0
112 0 0
Lap-2
N 59 41
90 0.017 0.024
95 0.229 0.146
100 0.746 0.817
102 0 0
105 0.008 0.012
110 0 0
Mdh-1
N 56 41
70 0 0.024
100 1 0.976
130 0 0
Me-1
N 57 41
70 0 0
90 0 0
100 0.860 0.951
100 0.140 0.049
120 0 0
Me-2
N 61 41
70 0.008 0.037
90 0.475 0.293
100 0.361 0.476
110 0.156 0.159
115 0 0.037
120 0 0
Mpi
N 59 40
25 0.042 0
100 0.322 0.262
200 0.636 0.725
300 0 0.013
Odh
N 58 31
80 0 0
100 0.034 0.016
112 0 0
115 0.026 0
120 0 0
129 0.940 0.984
140 0 0
Pgd
N 56 40
95 0.018 0.025
100 0.982 0.962
105 0 0.013
110 0 0
115 0 0
Pgm-1
N 36 28
90 0 0
95 0 0.036
100 0.667 0.768
105 0.333 0.196
115 0 0
Pgm-2
N 55 37
90 0 0
92 0.009 0
96 0.018 0
100 0.818 0.838
102 0.009 0
104 0.145 0.162
107 0 0
110 0 0
Pp
N 60 41
80 0.017 0.037
90 0.458 0.427
100 0.508 0.524
110 0.017 0.012
120 0 0
125 0 0
[H.sub.e] 0.259 [+ or -] 0.039 0.220 [+ or -] 0.039
Alleles/locus 2.8 [+ or -] 0.3 3.1 [+ or -] 0.3
[P.sib.95] 66.7 56.7
[P.sub.99] 80.0 76.7
Populations
Locus PPM PQE
Aat-1
N 71 72
94 0.007 0.035
100 0.979 0.958
108 0.007 0.007
116 0.007 0
Aat-2
N 67 70
94 0.015 0
100 0.978 0.979
108 0.007 0.021
Aco-1
N 67 71
100 0 0.007
105 0.552 0.535
110 0.433 0.458
115 0.015 0
120 0 0
Aco-2
N 67 43
95 0.067 0
100 0.022 0.011
105 0.904 0.978
107 0.007 0.011
110 0 0
112 0 0
Ald
N 47 45
l00 1 1
112 0 0
Ap-1
N 69 72
93 0 0
96 0.012 0.007
100 0.659 0.528
104 0 0
108 0.304 0.396
114 0.029 0.069
122 0.007 0
128 0 0
Ark
N 66 69
92 0.061 0.159
100 0.939 0.841
Dia
N 69 71
95 0.058 0.049
100 0.862 0.859
102 0.007 0.021
105 0.065 0.071
110 0.007 0
Est-D
N 71 71
82 0 0
90 0.451 0.627
100 0.549 0.366
107 0 0.007
110 0 0
Est-1
N 70 69
10 0.100 0.094
100 0.536 0.486
200 0.357 0.377
300 0.007 0.043
400 0 0
Gapdh
N 62 47
100 1 1
120 0 0
140 0 0
Gpi
N 70 69
93 0.007 0
96 0 0.014
98 0.043 0.196
100 0.871 0.674
102 0.050 0.094
105 0.029 0.022
107 0 0
110 0 0
112 0 0
Gapdh
N 70 72
90 0 0.007
100 0.993 0.979
115 0.007 0.014
Idh-1
N 60 71
60 0 0.021
80 0.800 0.845
100 0.133 0.092
150 0.067 0.042
160 0 0
Idh-2
N 61 69
96 0.008 0.007
100 0.992 0.993
104 0 0
108 0 0
Lap-1
N 71 71
93 0.014 0.028
96 0.246 0.211
100 0.683 0.725
102 0.021 0.014
104 0.021 0.021
108 0.014 0
110 0 0
112 0 0
Lap-2
N 71 72
90 0.077 0.042
95 0.204 0.201
100 0.676 0.729
102 0.007 0.007
105 0.028 0.021
110 0.007 0
Mdh-1
N 71 69
70 0.014 0.007
100 0.972 0.986
130 0.014 0.007
Me-1
N 65 72
70 0 0
90 0 0
100 0.946 0.972
100 0.054 0.028
120 0 0
Me-2
N 66 71
70 0.008 0
90 0.462 0.514
100 0.371 0.380
110 0.152 0.106
115 0.008 0
120 0 0
Mpi
N 68 70
25 0.022 0.086
100 0.140 0.314
200 0.838 0.600
300 0 0
Odh
N 68 37
80 0 0.014
100 0.125 0
112 0 0
115 0.015 0.014
120 0 0
129 0.846 0.973
140 0.015 0
Pgd
N 71 72
95 0.021 0.007
100 0.958 0.986
105 0.021 0.007
110 0 0
115 0 0
Pgm-1
N 15 35
90 0 0
95 0 0
100 1 0.957
105 0 0.043
115 0 0
Pgm-2
N 71 72
90 0 0
92 0.007 0
96 0.049 0.014
100 0.796 0.840
102 0 0.007
104 0.148 0.132
107 0 0.007
110 0 0
Pp
N 70 70
80 0.014 0.029
90 0.543 0.479
100 0.436 0.479
110 0.007 0.014
120 0 0
125 0 0
[H.sub.e] 0.237 [+ or -] 0.041 0.228 [+ or -] 0.042
Alleles/locus 2.5 [+ or -] 0.2 2.9 [+ or -] 0.2
[P.sib.95] 53.3 50.0
[P.sub.99] 73.3 80.8
TABLE 3.
F estimates by locus in populations from Europe, M. edulis (EH) and
M. galloprovincialis (GV), and populations on Pacific coast of South
America. [chi square] is the goodness-of-fit test to Hardy-Weinberg
equilibrium expected proportions by locus. Significant tests after
Bonferroni correction are underlined. Populations codes as in
Figure 1.
Populations
Locus EH GV PVA
Aat-1 F -0.021 -0.022 -0.012
[chi square] 0.021 0.043 2.863
Aat-2 F -0.007 -0.021
[chi square] 0.000 0.028
Aco-1 F 0.282 -0.217 -0.021
[chi square] 17.724 ** 1.073 0.010
Aco-2 F 0.234 0.173 0.207
[chi square] 9.898 14.398 15.610
Ald F -0.087 -0.037 -0.013
[chi square] 0.139 0.000 0.000
Ap-1 F 0.125 0.205 0.019
[chi square] 10.218 15.669 * 6.375
Ark F -0.014 0.305
[chi square] 0.007 5.142 *
Dia F 0.147 0.121 0.262
[chi square] 6.729 5.289 9.633 *
Est-D F -0.032 0.091 -0.085
[chi square] 0.153 13.456 1.123
Est-1 F 0.350 0.209 0.103
[chi square] 35.210 *** 12.291 14.411
Gapdh F -0.039 0.046 0.305
[chi square] 0.097 20.399 5.677 *
Gpi F 0.062 0.452 0.391
[chi square] 46.780 68.506 *** 45.267 ***
Gapdh F -0.032
[chi square] 0.049
Idh-1 F 0.292 0.173 -0.149
[chi square] 11.945 ** 10.659 1.382
Idh-2 F 0.082 0.334 -0.027
[chi square] 4.832 7.871 0.055
Lap-1 F 0.142 0.569 0.216
[chi square] 6.497 90.764 *** 11.115
Lap-2 F 0.144 0.209 0.047
[chi square] 13.770 10.735 1.383
Mdh-1 F -0.014 -0.011
[chi square] 0.007 0.007
Me-1 F 0.129 0.468 0.564
[chi square] 11.740 9.818 19.443 ***
Me-2 F 0.406 0.498 0.259
[chi square] 43.302 *** 17.815 *** 15.950 *
Mpi F -0.02 -0.028 -0.106
[chi square] 0.027 0.028 1.102
Odh F 0.227 0.311 -0.048
[chi square] 16.276 7.511 * 0.203
Pgd F -0.047 -0.025 -0.018
[chi square] 0.283 0.057 0.009
Pgm-1 F -0.037 0.113 0.125
[chi square] 0.000 2.868 0.702
Pgm-2 F 0.093 0.270 0.058
[chi square] 13.208 26.881 * 1.636
Pp F 0.270 0.201 0.134
[chi square] 11.462 23.324 42.074
Populations
Locus PAN PPM PQE
Aat-1 F -0.012 -0.014 -0.037
[chi square] 0.000 0.022 0.113
Aat-2 F -0.023 -0.022
[chi square] 0.046 0.022
Aco-1 F -0.026 0.273 0.078
[chi square] 0.737 5.877 * 1.696
Aco-2 F 0.491 0.004 -0.017
[chi square] 37.241 * 3.791 0.011
Ald F
[chi square]
Ap-1 F -0.118 0.094 0.107
[chi square] 4.115 3.255 4.464
Ark F 0.259 0.202 0.135
[chi square] 3.063 3.229 1.430
Dia F 0.030 0.042 0.002
[chi square] 1.343 18.588 2.742
Est-D F 0.015 -0.012 -0.042
[chi square] 0.030 0.002 0.665
Est-1 F 0.200 0.357 0.442
[chi square] 14.179 28.292 *** 55.220 ***
Gapdh F
[chi square]
Gpi F 0.614 0.212 0.553
[chi square] 37.826 *** 33.068 108.406 ***
Gapdh F -0.007 -0.016
[chi square] 0.000 0.022
Idh-1 F 0.019 0.112 0.079
[chi square] 0.834 4.350 5.416
Idh-2 F -0.025 -0.008 -0.007
[chi square] 0.013 0.000 0.000
Lap-1 F 0.109 -0.100 0.045
[chi square] 0.953 2.788 1.583
Lap-2 F -0.022 0.149 0.217
[chi square] 0.636 28.468 13.315 **
Mdh-1 F -0.025 -0.021 -0.011
[chi square] 0.013 0.044 0.007
Me-1 F 0.474 0.604 0.785
[chi square] 12.488 42.190 *** 49.175 ***
Me-2 F 0.114 0.069 0.223
[chi square] 14.407 14.722 6.828
Mpi F 0.383 0.154 -0.017
[chi square] 7.687 * 45.600 0.582
Odh F -0.016 0.001 -0.021
[chi square] 0.000 14.539 0.014
Pgd F -0.030 -0.032 -0.011
[chi square] 0.040 0.113 0.007
Pgm-1 F 0.133 0.652
[chi square] 1.858 22.328 *
Pgm-2 F -0.194 0.130 0.246
[chi square] 1.256 147.080 8.962
Pp F 0.099 0.054 0.049
[chi square] 5.477 3.225 3.541
(* P < 0.05; ** P < 0.01 and *** P < 0.001).
TABLE 4.
Wright's F-statistics ([F.sub.IS], [F.sub.IT], [F.sub.ST]) for 26
polymorphic loci for the South American Pacific coast samples and
control populations of M. edulis and M. galloprovincialis from Europe
(Group A) and for the four South American populations (Group B).
Underlined [chi square] homogeneity values were significant after
Bonferroni's correction (P < 0.05). Populations codes as in Figure 1.
A) South American and
control populations
Locus [F.sub.IS] [F.sub.IT] [F.sub.ST]
Aat-1 -0.0119 0.0108 0.0225 ***
Aat-2 -0.011 -0.0082 0.0028
Aco-1 0.1162 0.2328 0.1319 ***
Aco-2 0.1726 0.2000 0.0031 ***
Ald -0.051 -0.0038 0.0449 **
Ap-1 0.1058 0.1383 0.0364 ***
Ark 0.2215 0.2863 0.0833 ***
Dia 0.0979 0.1043 0.0072
Est-D -0.0192 0.3413 0.3537 ***
Est-1 0.3019 0.3056 0.0053 ***
Gapdh 0.1648 0.2334 0.0822 ***
Gpi 0.3578 0.5292 0.2669 ***
G3pdh -0.0147 -0.0055 0.0090
Idh-1 0.1316 0.2925 0.1854 ***
Idh-2 0.1276 0.2058 0.0897 ***
Lap-1 0.1451 0.3170 0.2012 ***
Lap-2 0.1542 0.2051 0.0602 ***
Mdh-1 -0.0093 -0.0115 -0.0021
Me-1 0.4381 0.4470 0.0158 **
Me-2 0.2363 0.4241 0.2459 ***
Mpi 0.0575 0.4424 0.4084 ***
Odh 0.1476 0.6768 0.6208 ***
Pgd -0.0250 -0.0245 0.0004
Pgm-1 0.1818 0.2838 0.1246 ***
Pgm-2 0.1540 0.1968 0.0505 ***
Pp 0.1140 0.2634 0.1686 ***
Mean 0.1622 0.3134 0.1804 ***
B) South American populations
Locus [F.sub.IS] [F.sub.IT] [F.sub.ST]
Aat-1 -0.0107 0.0161 0.0265 ***
Aat-2 -0.0117 -0.0135 -0.0018
Aco-1 0.0982 0.0961 -0.0022
Aco-2 0.1195 0.1249 0.0062
Ald -0.0009 0.0003 0.0012
Ap-1 0.0547 0.0595 0.0051
Ark 0.2307 0.2503 0.0255 **
Dia 0.0595 0.0558 -0.004
Est-D -0.0304 -0.0074 0.0223 *
Est-1 0.3160 0.3152 -0.0011
Gapdh 0.3144 0.3982 0.1222 ***
Gpi 0.4619 0.4735 0.0214 **
G3pdh -0.0057 -0.0045 0.0012
Idh-1 0.0389 0.0363 -0.0026
Idh-2 -0.0126 -0.0106 0.0020
Lap-1 0.0621 0.0598 -0.0025
Lap-2 0.1316 0.1332 0.0019
Mdh-1 -0.0112 -0.0109 0.0004
Me-1 0.5430 0.5557 0.0279 **
Me-2 0.1733 0.1796 0.0076 *
Mpi 0.0616 0.1000 0.0410 ***
Odh -0.0286 0.0176 0.0449 **
Pgd -0.0179 -0.0195 -0.0015
Pgm-1 0.1966 0.3106 0.1419 ***
Pgm-2 0.1102 0.1048 -0.0060
Pp 0.0707 0.0692 -0.0016
Mean 0.1339 0.1445 0.0122
(* P < 0.05, ** P < 0.01 and *** P < 0.0001).
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