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[3] Celera Compiles DNA Sequence Covering 90% of the Human Genome.


Business Editors/Health and Medical Writers

ROCKVILLE, Md.--(BW HealthWire)--Jan. 10, 2000

Celera Genomics (NYSE NYSE

See: New York Stock Exchange
:CRA See Community Reinvestment Act. ), a PE Corporation business, announced today that the company has DNA sequence DNA sequence Genetics The precise order of bases–A,T,G,C–in a segment of DNA, gene, chromosome, or an entire genome. See Base pair, Base sequence analysis, Chromosome, Gene, Genome.  in the Celera database that covers 90 percent of the human genome The human genome is the genome of Homo sapiens, which is composed of 24 distinct pairs of chromosomes (22 autosomal + X + Y) with a total of approximately 3 billion DNA base pairs containing an estimated 20,000–25,000 genes. .

As a result of the extensive sequence coverage of the 23 pairs of human chromosomes and based on statistical analysis, Celera believes that greater than 97 percent of all human genes are now represented in the Celera database.

Celera's DNA sequence is from more than 10 million high quality sequences, generated at Celera in the world's largest DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
 data factory. The sequence, developed from randomly selected fragments of all human chromosomes, contains over 5.3 billion base pairs (letters of the human genetic code) at greater than 99 percent accuracy.

The 5.3 billion base pairs represent 2.58 billion base pairs of unique sequence that have been calculated to cover 81 percent of an estimated genome size of 3.18 billion base pairs. These data, combined with all of the "finished" and "draft" human genome sequence data from the public databases, give Celera coverage of 90 percent of the human genome. Celera's sequencing was performed on 300 PE Biosystems ABI Abi (ā`bī) [short for Abijah], in the Bible, King Hezekiah's mother.


(Application Binary Interface) A specification for a specific hardware platform combined with the operating system.
 Prism(R) 3700 DNA Analyzers.

"The whole genome shotgun technique shotgun technique Malpractice A strategy by a plaintiff in a civil action involving multiple potential defendants, where all possible parties are named, in a shotgun-like manner  focuses on sequencing the entire genome at once, allowing for real-time discovery of human genes across the entire genome," said J. Craig Venter, Ph.D., Celera's president and chief scientific officer. "The early phase of sequencing the human genome using the whole genome shotgun process is especially important for gene discovery. We are rapidly coming to an end of that phase. Our statistical analysis and comparison to known genes suggest that greater than 97 percent of all human genes are represented in our database."

Whole Genome Sequencing

Celera began to sequence the human genome on Sept. 8, 1999, using the whole genome shotgun technique that its scientists pioneered in sequencing the first complete genome in 1995 at The Institute for Genomic Research (TIGR TIGR The Institute for Genomic Research
TIGR Treasury Investment Growth Receipt
TIGR This Is Getting Ridiculous
TIGR Thermally Induced Gallium Removal
TIGR TSPI Interface for GPS/RAJPO
). This technique involves randomly shearing the human chromosomes into millions of pieces of 2,000 and 10,000 base pairs in length. The chromosome fragments are inserted into a plasmid vector and propagated in E. coli E. coli: see Escherichia coli.
E. coli
 in full Escherichia coli

Species of bacterium that inhabits the stomach and intestines. E. coli can be transmitted by water, milk, food, or flies and other insects.
 to produce millions of copies of each fragment.

Celera scientists then sequence both ends of each fragment. The millions of sequences representing billions of letters of genetic code are then assembled into the proper order using proprietary genome assembly algorithms and the Celera supercomputer facility, resulting in the reconstruction of the linear sequence of the 23 pairs of human chromosomes.

The human genome sequencing effort funded by governments and some public charities around the world is based on sequencing large clones of human DNA in bacterial artificial chromosomes (BAC BAC
abbr.
blood alcohol concentration
) using a variation of the shotgun sequencing method. With that approach, approximately 25,000 BAC clones have to be sequenced and their order mapped to reassemble re·as·sem·ble  
v. re·as·sem·bled, re·as·sem·bling, re·as·sem·bles

v.tr.
1. To bring or gather together again: reassembled the band for a reunion tour.

2.
 the 23 human chromosomes. There are on average 150,000 letters of human DNA in a BAC.

Its "draft" sequence represents most of these base pairs; however the fragments of DNA sequence are largely unordered. By combining the Celera whole genome data with the individual clone "draft" BAC data, Celera plans to order the sequence within each BAC clone and then place the clones in the proper order to construct the genome's sequence. Celera expects to simultaneously and independently assemble the genome with its whole genome assembly algorithms. The combination of these two complementary genome sequencing and assembly approaches greatly reduces the time for Celera to finish the sequence of the human genome.

For the next several months Celera plans to continue its full-scale effort on human genome sequencing, with the anticipated addition of approximately two billion base pairs per month. The additional sequences should provide redundant coverage of the chromosome sequences, improve accuracy and aid in the final assembly of the chromosome sequences.

When sequencing and scientific analysis of the human genome is completed, the consensus sequence data will be submitted for publication in a scientific journal. These published data will be made freely available to researchers around the world under a non-redistribution agreement.

Celera Discovers Key Regulatory Genes

Celera's gene discovery team has identified several thousand new genes that potentially play key roles in cellular communication and the regulation of physiological systems in the human body, including blood pressure, cell growth, and neurotransmission Neurotransmission
When a neurotransmitter, or chemical agent released by a particular brain cell, travels across the synapse to act on the target cell to either inhibit or excite it.
. These are primarily rarely expressed genes and are not represented in the public database, GenBank. These are genes of significant interest to the pharmaceutical industry, since they can be used as the basis of new therapeutic development.

Celera has previously reported filing provisional patent applications on newly discovered genes and continues to file these applications on medically relevant gene discoveries. The company intends to file full applications on those medically important discoveries, and has implemented a non-exclusive licensing program to make the intellectual property available to Celera database subscribers.

Celera Milestones

Human Genome:

Celera is now on target to complete the sequencing phase of the human genome by summer 2000, incorporating data from GenBank. After sequencing, Celera then plans to begin shotgun sequencing of the mouse genome.

Drosophila Drosophila: see fruit fly.
drosophila

Any member of about 1,000 species in the dipteran genus Drosophila, commonly known as fruit flies but also called vinegar flies. Some species, particularly D.
 melanogaster Genome:

On Dec. 30, 1999 Celera completed the release of a partially assembled Drosophila genome sequence to the public data bank. Celera continues to do scientific analysis in conjunction with the Berkeley Drosophila Genome Project genome project 1 The Human Genome Project, see there 2. A general term for a coordinated research initiative for mapping and sequencing the genome of any organism  (BDGP BDGP Berkeley Drosophila Genome Project ) and other collaborators, and intends to submit a manuscript to a scientific journal for publication in spring 2000. Celera and its collaborators have discovered a total of 14,000 genes in the genome, many in commercially important protein families, which should prove valuable in developing new therapeutics and insecticides.

NOTE: Celera's news briefing will be held on Monday, Jan. 10 at 11 a.m. EST EST electroshock therapy.

EST
abbr.
electroshock therapy
. It can be accessed via listen-only webcast at: http//webevents.broadcast.com/medialink/celera0100/

Celera's mission is to become the definitive source of genomic and related agricultural and medical information. Celera's information will be available on a subscription basis to academic and commercial institutions who will have access to tools for viewing, browsing, analyzing, and integrating data in a way that will assist scientists in accelerating their understanding of the human genetic code.

PE Corporation currently comprises two operating groups. Celera Genomics Group, headquartered in Rockville, intends to become the definitive source of genomic and related medical information. PE Biosystems Group, headquartered in Foster City, Calif. and with sales of $1.2 billion during fiscal 1999, develops and markets instrument-based systems, reagents, software, and contract related services to the life science industry and research community.

Information about the company, including consolidated financial statements Consolidated Financial Statements

The combined financial statements of a parent company and its subsidiaries.

Notes:
Because consolidated financial statements present an aggregated look at the financial position of a parent and its subsidiaries, they enable you to gauge
 of PE Corporation, is available on the World Wide Web at http://www.pecorporation.com or by phoning 800/762-6923.

Certain statements in this press release are forward-looking. These may be identified by the use of forward-looking words or phrases such as "believe," "expect," "anticipate," "should," "planned," "estimated," and "potential," among others. These forward-looking statements are based on PE Corporation's current expectations. The Private Securities Litigation Reform Act The Private Securities Litigation Reform Act of 1995 (PSLRA) implemented several significant substantive changes affecting certain cases brought under the federal securities laws, including changes related to pleading, discovery, liability, class representation and awards fees and  of 1995 provides a "safe harbor Safe Harbor

1. A legal provision to reduce or eliminate liability as long as good faith is demonstrated.

2. A form of shark repellent implemented by a target company acquiring a business that is so poorly regulated that the target itself is less attractive.
" for such forward-looking statements. In order to comply with the terms of the safe harbor, PE Corporation notes that a variety of factors could cause actual results and experience to differ materially from the anticipated results or other expectations expressed in such forward-looking statements. The risks and uncertainties that may affect the operations, performance, development, and results of Celera Genomics' businesses include but are not limited to (1) early stage of operations and uncertainty of operating results; (2) no precedent for Celera Genomics' business plan; (3) uncertainty of value of polymorphism polymorphism, of minerals, property of crystallizing in two or more distinct forms. Calcium carbonate is dimorphous (two forms), crystallizing as calcite or aragonite. Titanium dioxide is trimorphous; its three forms are brookite, anatase (or octahedrite), and rutile.  data; (4) initial reliance on pharmaceutical industry; (5) high dependence on key employees; (6) uncertain protection of intellectual property and proprietary rights; (7) highly competitive business; (8) need to manage rapid growth; and (9) other factors that might be described from time to time in PE Corporation's filings with the Securities and Exchange Commission.
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Date:Jan 10, 2000
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