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"Artificial DNA" creation to offer clues on how life evolved in primordial world.


Byline: ANI

Washington, June 12 (ANI): A team of scientists has created a simple chemical system that mimics DNA DNA: see nucleic acid.
DNA
 or deoxyribonucleic acid

One of two types of nucleic acid (the other is RNA); a complex organic compound found in all living cells and many viruses. It is the chemical substance of genes.
, which could offer possible clues about the primordial world, and how life emerges.

The new analog to DNA, created by a team of Scripps Research scientists, assembles and disassembles itself without the need for enzymes.

Because the new system comprises components that might reasonably be expected in a primordial world, the new chemical system could answer questions about how life could emerge.

The work might also be a starting point on the way to exotic new materials that repair themselves or transform in response to their environment.

While much of the past work with DNA analogs such as PNA (Peptide nucleic acid) has focused on nucleobases already anchored to their backbone units, Professor Reza Ghadiri, a Scripps Research chemist and team leader of the new research, had the idea of working with simpler building blocks.

If these blocks had easily reversed bonds, unlike DNA and PNA, it could avoid the need for enzymes while preserving key characteristics for encoding information.

The resulting new system involves two main component types.

The backbone units are peptides linked in a set pattern with the amino acid cysteine cysteine (sĭs`tēn), organic compound, one of the 20 amino acids commonly found in animal proteins. Only the l-stereoisomer participates in the biosynthesis of mammalian protein.  exposed and available to react.

These peptides interact with the same nucleobases found in DNA, but each nucleobase is bound to an organic compound known as a thioester.

If an unzipped segment of DNA is added as a template to a solution with the tPNA components, the nucelobase soldiers will automatically assume a formation on peptide strands that complements the DNA according to standard Watson-Crick pairing of adenine adenine (ăd`ənĭn, –nīn, –nēn), organic base of the purine family. Adenine combines with the sugar ribose to form adenosine, which in turn can be bonded with from one to three phosphoric acid units, yielding the three  with thymine thymine (thī`mēn), organic base of the pyrimidine family. Thymine was the first pyrimidine to be purified from a natural source, having been isolated from calf thymus and beef spleen in 1893–4.  and cytosine cytosine (sī`tōsēn'), organic base of the pyrimidine family. It was isolated from the nucleic acid of calf thymus tissue in 1894.  with guanine guanine (gwä`nēn), organic base of the purine family. It was reported (1846) to be in the guano of birds; later (1879–84) it was established as one of the major constituents of nucleic acids. .

The complementary tPNA and DNA strands bond, but these pairings can then be unzipped by adding to the mix complementary DNA strands, which outcompete the tPNA for space on the initial templates.

The DNA-DNA pairings remain stable, causing the tPNA components to resume their unstable shuffling until a new DNA template is added and the process begins again.

The Ghadiri team was also able to show that a strand of tPNA can act as a template, causing complementary tPNA formation and strand pairing, though they have not yet achieved self-replication for tPNA, an ultimate goal.

All of the chemical constituents of the assembled tPNA could have been found in a world before life began.

"So, it is tantalizing tan·ta·lize  
tr.v. tan·ta·lized, tan·ta·liz·ing, tan·ta·liz·es
To excite (another) by exposing something desirable while keeping it out of reach.
 to think about the possibility of peptides and nucleic acids involved in primordial genetic systems," said Ghadiri. (ANI)

Copyright 2009 Asian News International The Asian News International (ANI) agency provides multimedia news to China and 50 bureaus in India. It covers virtually all of South Asia since its foundation and presently claims, on its official website, to be the leading South Asia-wide news agency.  (ANI) - All Rights Reserved.

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Publication:Asian News International
Date:Jun 12, 2009
Words:430
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